data_1FJL # _entry.id 1FJL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FJL pdb_00001fjl 10.2210/pdb1fjl/pdb RCSB PDE025 ? ? WWPDB D_1000173310 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-06-20 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-03 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FJL _pdbx_database_status.recvd_initial_deposition_date 1995-12-17 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wilson, D.S.' 1 'Guenther, B.' 2 'Desplan, C.' 3 'Kuriyan, J.' 4 # _citation.id primary _citation.title 'High resolution crystal structure of a paired (Pax) class cooperative homeodomain dimer on DNA.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 82 _citation.page_first 709 _citation.page_last 719 _citation.year 1995 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7671301 _citation.pdbx_database_id_DOI '10.1016/0092-8674(95)90468-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wilson, D.S.' 1 ? primary 'Guenther, B.' 2 ? primary 'Desplan, C.' 3 ? primary 'Kuriyan, J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PAIRED PROTEIN' 9716.782 3 ? 'C, C4S, S50Q' HOMEODOMAIN ? 2 polymer syn ;DNA (5'-D(*AP*AP*TP*AP*AP*TP*CP*TP*GP*AP*TP*TP*AP*C)-3') ; 4262.816 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*TP*AP*AP*TP*CP*AP*GP*AP*TP*TP*AP*T)-3') ; 4293.827 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*TP*GP*TP*AP*AP*TP*CP*TP*GP*AP*TP*TP*AP*C)-3') ; 4269.801 1 ? ? ? ? 5 water nat water 18.015 243 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PRD, PAIRED PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EDISDCESEPGIALKRKQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSV S ; ;EDISDCESEPGIALKRKQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSV S ; A,B,C ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DA)(DA)(DT)(DC)(DT)(DG)(DA)(DT)(DT)(DA)(DC)' AATAATCTGATTAC D ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DA)(DA)(DT)(DC)(DA)(DG)(DA)(DT)(DT)(DA)(DT)' TGTAATCAGATTAT E ? 4 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DA)(DA)(DT)(DC)(DT)(DG)(DA)(DT)(DT)(DA)(DC)' TGTAATCTGATTAC F ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ASP n 1 3 ILE n 1 4 SER n 1 5 ASP n 1 6 CYS n 1 7 GLU n 1 8 SER n 1 9 GLU n 1 10 PRO n 1 11 GLY n 1 12 ILE n 1 13 ALA n 1 14 LEU n 1 15 LYS n 1 16 ARG n 1 17 LYS n 1 18 GLN n 1 19 ARG n 1 20 ARG n 1 21 SER n 1 22 ARG n 1 23 THR n 1 24 THR n 1 25 PHE n 1 26 SER n 1 27 ALA n 1 28 SER n 1 29 GLN n 1 30 LEU n 1 31 ASP n 1 32 GLU n 1 33 LEU n 1 34 GLU n 1 35 ARG n 1 36 ALA n 1 37 PHE n 1 38 GLU n 1 39 ARG n 1 40 THR n 1 41 GLN n 1 42 TYR n 1 43 PRO n 1 44 ASP n 1 45 ILE n 1 46 TYR n 1 47 THR n 1 48 ARG n 1 49 GLU n 1 50 GLU n 1 51 LEU n 1 52 ALA n 1 53 GLN n 1 54 ARG n 1 55 THR n 1 56 ASN n 1 57 LEU n 1 58 THR n 1 59 GLU n 1 60 ALA n 1 61 ARG n 1 62 ILE n 1 63 GLN n 1 64 VAL n 1 65 TRP n 1 66 PHE n 1 67 GLN n 1 68 ASN n 1 69 ARG n 1 70 ARG n 1 71 ALA n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 LYS n 1 76 GLN n 1 77 HIS n 1 78 THR n 1 79 SER n 1 80 VAL n 1 81 SER n 2 1 DA y 2 1 DT y 2 2 DA n 2 3 DT n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DT y 2 8 DA y 2 9 DG n 2 10 DA n 2 11 DT n 2 12 DT n 2 13 DA n 2 14 DC n 3 1 DT y 3 1 DA y 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DA n 3 6 DT n 3 7 DC n 3 8 DA y 3 8 DT y 3 9 DG n 3 10 DA n 3 11 DT n 3 12 DT n 3 13 DA n 3 14 DT n 4 1 DT y 4 1 DA y 4 2 DG n 4 3 DT n 4 4 DA n 4 5 DA n 4 6 DT n 4 7 DC n 4 8 DT y 4 8 DA y 4 9 DG n 4 10 DA n 4 11 DT n 4 12 DT n 4 13 DA n 4 14 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'fruit fly' _entity_src_gen.gene_src_genus Drosophila _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 -16 ? ? ? A . n A 1 2 ASP 2 -15 ? ? ? A . n A 1 3 ILE 3 -14 ? ? ? A . n A 1 4 SER 4 -13 ? ? ? A . n A 1 5 ASP 5 -12 ? ? ? A . n A 1 6 CYS 6 -11 ? ? ? A . n A 1 7 GLU 7 -10 ? ? ? A . n A 1 8 SER 8 -9 ? ? ? A . n A 1 9 GLU 9 -8 ? ? ? A . n A 1 10 PRO 10 -7 ? ? ? A . n A 1 11 GLY 11 -6 ? ? ? A . n A 1 12 ILE 12 -5 ? ? ? A . n A 1 13 ALA 13 -4 ? ? ? A . n A 1 14 LEU 14 -3 ? ? ? A . n A 1 15 LYS 15 -2 ? ? ? A . n A 1 16 ARG 16 -1 ? ? ? A . n A 1 17 LYS 17 0 0 LYS LYS A . n A 1 18 GLN 18 1 1 GLN GLN A . n A 1 19 ARG 19 2 2 ARG ARG A . n A 1 20 ARG 20 3 3 ARG ARG A . n A 1 21 SER 21 4 4 SER SER A . n A 1 22 ARG 22 5 5 ARG ARG A . n A 1 23 THR 23 6 6 THR THR A . n A 1 24 THR 24 7 7 THR THR A . n A 1 25 PHE 25 8 8 PHE PHE A . n A 1 26 SER 26 9 9 SER SER A . n A 1 27 ALA 27 10 10 ALA ALA A . n A 1 28 SER 28 11 11 SER SER A . n A 1 29 GLN 29 12 12 GLN GLN A . n A 1 30 LEU 30 13 13 LEU LEU A . n A 1 31 ASP 31 14 14 ASP ASP A . n A 1 32 GLU 32 15 15 GLU GLU A . n A 1 33 LEU 33 16 16 LEU LEU A . n A 1 34 GLU 34 17 17 GLU GLU A . n A 1 35 ARG 35 18 18 ARG ARG A . n A 1 36 ALA 36 19 19 ALA ALA A . n A 1 37 PHE 37 20 20 PHE PHE A . n A 1 38 GLU 38 21 21 GLU GLU A . n A 1 39 ARG 39 22 22 ARG ARG A . n A 1 40 THR 40 23 23 THR THR A . n A 1 41 GLN 41 24 24 GLN GLN A . n A 1 42 TYR 42 25 25 TYR TYR A . n A 1 43 PRO 43 26 26 PRO PRO A . n A 1 44 ASP 44 27 27 ASP ASP A . n A 1 45 ILE 45 28 28 ILE ILE A . n A 1 46 TYR 46 29 29 TYR TYR A . n A 1 47 THR 47 30 30 THR THR A . n A 1 48 ARG 48 31 31 ARG ARG A . n A 1 49 GLU 49 32 32 GLU GLU A . n A 1 50 GLU 50 33 33 GLU GLU A . n A 1 51 LEU 51 34 34 LEU LEU A . n A 1 52 ALA 52 35 35 ALA ALA A . n A 1 53 GLN 53 36 36 GLN GLN A . n A 1 54 ARG 54 37 37 ARG ARG A . n A 1 55 THR 55 38 38 THR THR A . n A 1 56 ASN 56 39 39 ASN ASN A . n A 1 57 LEU 57 40 40 LEU LEU A . n A 1 58 THR 58 41 41 THR THR A . n A 1 59 GLU 59 42 42 GLU GLU A . n A 1 60 ALA 60 43 43 ALA ALA A . n A 1 61 ARG 61 44 44 ARG ARG A . n A 1 62 ILE 62 45 45 ILE ILE A . n A 1 63 GLN 63 46 46 GLN GLN A . n A 1 64 VAL 64 47 47 VAL VAL A . n A 1 65 TRP 65 48 48 TRP TRP A . n A 1 66 PHE 66 49 49 PHE PHE A . n A 1 67 GLN 67 50 50 GLN GLN A . n A 1 68 ASN 68 51 51 ASN ASN A . n A 1 69 ARG 69 52 52 ARG ARG A . n A 1 70 ARG 70 53 53 ARG ARG A . n A 1 71 ALA 71 54 54 ALA ALA A . n A 1 72 ARG 72 55 55 ARG ARG A . n A 1 73 LEU 73 56 56 LEU LEU A . n A 1 74 ARG 74 57 57 ARG ARG A . n A 1 75 LYS 75 58 58 LYS LYS A . n A 1 76 GLN 76 59 59 GLN GLN A . n A 1 77 HIS 77 60 60 HIS HIS A . n A 1 78 THR 78 61 61 THR THR A . n A 1 79 SER 79 62 62 SER SER A . n A 1 80 VAL 80 63 63 VAL VAL A . n A 1 81 SER 81 64 64 SER SER A . n B 1 1 GLU 1 -16 ? ? ? B . n B 1 2 ASP 2 -15 ? ? ? B . n B 1 3 ILE 3 -14 ? ? ? B . n B 1 4 SER 4 -13 ? ? ? B . n B 1 5 ASP 5 -12 ? ? ? B . n B 1 6 CYS 6 -11 ? ? ? B . n B 1 7 GLU 7 -10 ? ? ? B . n B 1 8 SER 8 -9 ? ? ? B . n B 1 9 GLU 9 -8 ? ? ? B . n B 1 10 PRO 10 -7 ? ? ? B . n B 1 11 GLY 11 -6 ? ? ? B . n B 1 12 ILE 12 -5 ? ? ? B . n B 1 13 ALA 13 -4 ? ? ? B . n B 1 14 LEU 14 -3 ? ? ? B . n B 1 15 LYS 15 -2 ? ? ? B . n B 1 16 ARG 16 -1 ? ? ? B . n B 1 17 LYS 17 0 ? ? ? B . n B 1 18 GLN 18 1 1 GLN GLN B . n B 1 19 ARG 19 2 2 ARG ARG B . n B 1 20 ARG 20 3 3 ARG ARG B . n B 1 21 SER 21 4 4 SER SER B . n B 1 22 ARG 22 5 5 ARG ARG B . n B 1 23 THR 23 6 6 THR THR B . n B 1 24 THR 24 7 7 THR THR B . n B 1 25 PHE 25 8 8 PHE PHE B . n B 1 26 SER 26 9 9 SER SER B . n B 1 27 ALA 27 10 10 ALA ALA B . n B 1 28 SER 28 11 11 SER SER B . n B 1 29 GLN 29 12 12 GLN GLN B . n B 1 30 LEU 30 13 13 LEU LEU B . n B 1 31 ASP 31 14 14 ASP ASP B . n B 1 32 GLU 32 15 15 GLU GLU B . n B 1 33 LEU 33 16 16 LEU LEU B . n B 1 34 GLU 34 17 17 GLU GLU B . n B 1 35 ARG 35 18 18 ARG ARG B . n B 1 36 ALA 36 19 19 ALA ALA B . n B 1 37 PHE 37 20 20 PHE PHE B . n B 1 38 GLU 38 21 21 GLU GLU B . n B 1 39 ARG 39 22 22 ARG ARG B . n B 1 40 THR 40 23 23 THR THR B . n B 1 41 GLN 41 24 24 GLN GLN B . n B 1 42 TYR 42 25 25 TYR TYR B . n B 1 43 PRO 43 26 26 PRO PRO B . n B 1 44 ASP 44 27 27 ASP ASP B . n B 1 45 ILE 45 28 28 ILE ILE B . n B 1 46 TYR 46 29 29 TYR TYR B . n B 1 47 THR 47 30 30 THR THR B . n B 1 48 ARG 48 31 31 ARG ARG B . n B 1 49 GLU 49 32 32 GLU GLU B . n B 1 50 GLU 50 33 33 GLU GLU B . n B 1 51 LEU 51 34 34 LEU LEU B . n B 1 52 ALA 52 35 35 ALA ALA B . n B 1 53 GLN 53 36 36 GLN GLN B . n B 1 54 ARG 54 37 37 ARG ARG B . n B 1 55 THR 55 38 38 THR THR B . n B 1 56 ASN 56 39 39 ASN ASN B . n B 1 57 LEU 57 40 40 LEU LEU B . n B 1 58 THR 58 41 41 THR THR B . n B 1 59 GLU 59 42 42 GLU GLU B . n B 1 60 ALA 60 43 43 ALA ALA B . n B 1 61 ARG 61 44 44 ARG ARG B . n B 1 62 ILE 62 45 45 ILE ILE B . n B 1 63 GLN 63 46 46 GLN GLN B . n B 1 64 VAL 64 47 47 VAL VAL B . n B 1 65 TRP 65 48 48 TRP TRP B . n B 1 66 PHE 66 49 49 PHE PHE B . n B 1 67 GLN 67 50 50 GLN GLN B . n B 1 68 ASN 68 51 51 ASN ASN B . n B 1 69 ARG 69 52 52 ARG ARG B . n B 1 70 ARG 70 53 53 ARG ARG B . n B 1 71 ALA 71 54 54 ALA ALA B . n B 1 72 ARG 72 55 55 ARG ARG B . n B 1 73 LEU 73 56 56 LEU LEU B . n B 1 74 ARG 74 57 57 ARG ARG B . n B 1 75 LYS 75 58 58 LYS LYS B . n B 1 76 GLN 76 59 ? ? ? B . n B 1 77 HIS 77 60 ? ? ? B . n B 1 78 THR 78 61 ? ? ? B . n B 1 79 SER 79 62 ? ? ? B . n B 1 80 VAL 80 63 ? ? ? B . n B 1 81 SER 81 64 ? ? ? B . n C 1 1 GLU 1 -16 ? ? ? C . n C 1 2 ASP 2 -15 ? ? ? C . n C 1 3 ILE 3 -14 ? ? ? C . n C 1 4 SER 4 -13 ? ? ? C . n C 1 5 ASP 5 -12 ? ? ? C . n C 1 6 CYS 6 -11 ? ? ? C . n C 1 7 GLU 7 -10 ? ? ? C . n C 1 8 SER 8 -9 ? ? ? C . n C 1 9 GLU 9 -8 ? ? ? C . n C 1 10 PRO 10 -7 ? ? ? C . n C 1 11 GLY 11 -6 ? ? ? C . n C 1 12 ILE 12 -5 ? ? ? C . n C 1 13 ALA 13 -4 ? ? ? C . n C 1 14 LEU 14 -3 ? ? ? C . n C 1 15 LYS 15 -2 ? ? ? C . n C 1 16 ARG 16 -1 ? ? ? C . n C 1 17 LYS 17 0 0 LYS LYS C . n C 1 18 GLN 18 1 1 GLN GLN C . n C 1 19 ARG 19 2 2 ARG ARG C . n C 1 20 ARG 20 3 3 ARG ARG C . n C 1 21 SER 21 4 4 SER SER C . n C 1 22 ARG 22 5 5 ARG ARG C . n C 1 23 THR 23 6 6 THR THR C . n C 1 24 THR 24 7 7 THR THR C . n C 1 25 PHE 25 8 8 PHE PHE C . n C 1 26 SER 26 9 9 SER SER C . n C 1 27 ALA 27 10 10 ALA ALA C . n C 1 28 SER 28 11 11 SER SER C . n C 1 29 GLN 29 12 12 GLN GLN C . n C 1 30 LEU 30 13 13 LEU LEU C . n C 1 31 ASP 31 14 14 ASP ASP C . n C 1 32 GLU 32 15 15 GLU GLU C . n C 1 33 LEU 33 16 16 LEU LEU C . n C 1 34 GLU 34 17 17 GLU GLU C . n C 1 35 ARG 35 18 18 ARG ARG C . n C 1 36 ALA 36 19 19 ALA ALA C . n C 1 37 PHE 37 20 20 PHE PHE C . n C 1 38 GLU 38 21 21 GLU GLU C . n C 1 39 ARG 39 22 22 ARG ARG C . n C 1 40 THR 40 23 23 THR THR C . n C 1 41 GLN 41 24 24 GLN GLN C . n C 1 42 TYR 42 25 25 TYR TYR C . n C 1 43 PRO 43 26 26 PRO PRO C . n C 1 44 ASP 44 27 27 ASP ASP C . n C 1 45 ILE 45 28 28 ILE ILE C . n C 1 46 TYR 46 29 29 TYR TYR C . n C 1 47 THR 47 30 30 THR THR C . n C 1 48 ARG 48 31 31 ARG ARG C . n C 1 49 GLU 49 32 32 GLU GLU C . n C 1 50 GLU 50 33 33 GLU GLU C . n C 1 51 LEU 51 34 34 LEU LEU C . n C 1 52 ALA 52 35 35 ALA ALA C . n C 1 53 GLN 53 36 36 GLN GLN C . n C 1 54 ARG 54 37 37 ARG ARG C . n C 1 55 THR 55 38 38 THR THR C . n C 1 56 ASN 56 39 39 ASN ASN C . n C 1 57 LEU 57 40 40 LEU LEU C . n C 1 58 THR 58 41 41 THR THR C . n C 1 59 GLU 59 42 42 GLU GLU C . n C 1 60 ALA 60 43 43 ALA ALA C . n C 1 61 ARG 61 44 44 ARG ARG C . n C 1 62 ILE 62 45 45 ILE ILE C . n C 1 63 GLN 63 46 46 GLN GLN C . n C 1 64 VAL 64 47 47 VAL VAL C . n C 1 65 TRP 65 48 48 TRP TRP C . n C 1 66 PHE 66 49 49 PHE PHE C . n C 1 67 GLN 67 50 50 GLN GLN C . n C 1 68 ASN 68 51 51 ASN ASN C . n C 1 69 ARG 69 52 52 ARG ARG C . n C 1 70 ARG 70 53 53 ARG ARG C . n C 1 71 ALA 71 54 54 ALA ALA C . n C 1 72 ARG 72 55 55 ARG ARG C . n C 1 73 LEU 73 56 56 LEU LEU C . n C 1 74 ARG 74 57 57 ARG ARG C . n C 1 75 LYS 75 58 58 LYS LYS C . n C 1 76 GLN 76 59 ? ? ? C . n C 1 77 HIS 77 60 ? ? ? C . n C 1 78 THR 78 61 ? ? ? C . n C 1 79 SER 79 62 ? ? ? C . n C 1 80 VAL 80 63 ? ? ? C . n C 1 81 SER 81 64 ? ? ? C . n D 2 1 DA 1 1 1 DA DA D . y D 2 1 DT 1 1 1 DT DT D . y D 2 2 DA 2 2 2 DA A D . n D 2 3 DT 3 3 3 DT T D . n D 2 4 DA 4 4 4 DA A D . n D 2 5 DA 5 5 5 DA A D . n D 2 6 DT 6 6 6 DT T D . n D 2 7 DC 7 7 7 DC C D . n D 2 8 DT 8 8 8 DT DT D . y D 2 8 DA 8 8 8 DA DA D . y D 2 9 DG 9 9 9 DG G D . n D 2 10 DA 10 10 10 DA A D . n D 2 11 DT 11 11 11 DT T D . n D 2 12 DT 12 12 12 DT T D . n D 2 13 DA 13 13 13 DA A D . n D 2 14 DC 14 14 14 DC C D . n E 3 1 DT 1 1 1 DT DT E . y E 3 1 DA 1 1 1 DA DA E . y E 3 2 DG 2 2 2 DG G E . n E 3 3 DT 3 3 3 DT T E . n E 3 4 DA 4 4 4 DA A E . n E 3 5 DA 5 5 5 DA A E . n E 3 6 DT 6 6 6 DT T E . n E 3 7 DC 7 7 7 DC C E . n E 3 8 DA 8 8 8 DA DA E . y E 3 8 DT 8 8 8 DT DT E . y E 3 9 DG 9 9 9 DG G E . n E 3 10 DA 10 10 10 DA A E . n E 3 11 DT 11 11 11 DT T E . n E 3 12 DT 12 12 12 DT T E . n E 3 13 DA 13 13 13 DA A E . n E 3 14 DT 14 14 14 DT T E . n F 4 1 DT 1 1 1 DT DT F . y F 4 1 DA 1 1 1 DA DA F . y F 4 2 DG 2 2 2 DG G F . n F 4 3 DT 3 3 3 DT T F . n F 4 4 DA 4 4 4 DA A F . n F 4 5 DA 5 5 5 DA A F . n F 4 6 DT 6 6 6 DT T F . n F 4 7 DC 7 7 7 DC C F . n F 4 8 DT 8 8 8 DT DT F . y F 4 8 DA 8 8 8 DA DA F . y F 4 9 DG 9 9 9 DG G F . n F 4 10 DA 10 10 10 DA A F . n F 4 11 DT 11 11 11 DT T F . n F 4 12 DT 12 12 12 DT T F . n F 4 13 DA 13 13 13 DA A F . n F 4 14 DC 14 14 14 DC C F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 HOH 1 701 701 HOH HOH A . G 5 HOH 2 707 707 HOH HOH A . G 5 HOH 3 708 708 HOH HOH A . G 5 HOH 4 712 712 HOH HOH A . G 5 HOH 5 721 721 HOH HOH A . G 5 HOH 6 731 731 HOH HOH A . G 5 HOH 7 732 732 HOH HOH A . G 5 HOH 8 735 735 HOH HOH A . G 5 HOH 9 740 740 HOH HOH A . G 5 HOH 10 744 744 HOH HOH A . G 5 HOH 11 749 749 HOH HOH A . G 5 HOH 12 753 753 HOH HOH A . G 5 HOH 13 760 760 HOH HOH A . G 5 HOH 14 766 766 HOH HOH A . G 5 HOH 15 771 771 HOH HOH A . G 5 HOH 16 781 781 HOH HOH A . G 5 HOH 17 782 782 HOH HOH A . G 5 HOH 18 785 785 HOH HOH A . G 5 HOH 19 795 795 HOH HOH A . G 5 HOH 20 796 796 HOH HOH A . G 5 HOH 21 798 798 HOH HOH A . G 5 HOH 22 803 803 HOH HOH A . G 5 HOH 23 805 805 HOH HOH A . G 5 HOH 24 807 807 HOH HOH A . G 5 HOH 25 819 819 HOH HOH A . G 5 HOH 26 823 823 HOH HOH A . G 5 HOH 27 824 824 HOH HOH A . G 5 HOH 28 831 831 HOH HOH A . G 5 HOH 29 833 833 HOH HOH A . G 5 HOH 30 835 835 HOH HOH A . G 5 HOH 31 836 836 HOH HOH A . G 5 HOH 32 839 839 HOH HOH A . G 5 HOH 33 841 841 HOH HOH A . G 5 HOH 34 842 842 HOH HOH A . G 5 HOH 35 845 845 HOH HOH A . G 5 HOH 36 846 846 HOH HOH A . G 5 HOH 37 848 848 HOH HOH A . G 5 HOH 38 855 855 HOH HOH A . G 5 HOH 39 858 858 HOH HOH A . G 5 HOH 40 864 864 HOH HOH A . G 5 HOH 41 868 868 HOH HOH A . G 5 HOH 42 869 869 HOH HOH A . G 5 HOH 43 874 874 HOH HOH A . G 5 HOH 44 876 876 HOH HOH A . G 5 HOH 45 877 877 HOH HOH A . G 5 HOH 46 881 881 HOH HOH A . G 5 HOH 47 892 892 HOH HOH A . G 5 HOH 48 893 893 HOH HOH A . G 5 HOH 49 894 894 HOH HOH A . G 5 HOH 50 897 897 HOH HOH A . G 5 HOH 51 900 900 HOH HOH A . G 5 HOH 52 903 903 HOH HOH A . G 5 HOH 53 904 904 HOH HOH A . G 5 HOH 54 905 905 HOH HOH A . G 5 HOH 55 907 907 HOH HOH A . G 5 HOH 56 909 909 HOH HOH A . G 5 HOH 57 913 913 HOH HOH A . G 5 HOH 58 917 917 HOH HOH A . G 5 HOH 59 920 920 HOH HOH A . G 5 HOH 60 921 921 HOH HOH A . G 5 HOH 61 930 930 HOH HOH A . G 5 HOH 62 932 932 HOH HOH A . G 5 HOH 63 936 936 HOH HOH A . G 5 HOH 64 939 939 HOH HOH A . H 5 HOH 1 703 703 HOH HOH B . H 5 HOH 2 704 704 HOH HOH B . H 5 HOH 3 709 709 HOH HOH B . H 5 HOH 4 710 710 HOH HOH B . H 5 HOH 5 711 711 HOH HOH B . H 5 HOH 6 714 714 HOH HOH B . H 5 HOH 7 719 719 HOH HOH B . H 5 HOH 8 722 722 HOH HOH B . H 5 HOH 9 723 723 HOH HOH B . H 5 HOH 10 724 724 HOH HOH B . H 5 HOH 11 727 727 HOH HOH B . H 5 HOH 12 728 728 HOH HOH B . H 5 HOH 13 730 730 HOH HOH B . H 5 HOH 14 742 742 HOH HOH B . H 5 HOH 15 743 743 HOH HOH B . H 5 HOH 16 745 745 HOH HOH B . H 5 HOH 17 746 746 HOH HOH B . H 5 HOH 18 747 747 HOH HOH B . H 5 HOH 19 755 755 HOH HOH B . H 5 HOH 20 758 758 HOH HOH B . H 5 HOH 21 763 763 HOH HOH B . H 5 HOH 22 764 764 HOH HOH B . H 5 HOH 23 778 778 HOH HOH B . H 5 HOH 24 784 784 HOH HOH B . H 5 HOH 25 789 789 HOH HOH B . H 5 HOH 26 792 792 HOH HOH B . H 5 HOH 27 793 793 HOH HOH B . H 5 HOH 28 799 799 HOH HOH B . H 5 HOH 29 800 800 HOH HOH B . H 5 HOH 30 801 801 HOH HOH B . H 5 HOH 31 804 804 HOH HOH B . H 5 HOH 32 806 806 HOH HOH B . H 5 HOH 33 808 808 HOH HOH B . H 5 HOH 34 811 811 HOH HOH B . H 5 HOH 35 814 814 HOH HOH B . H 5 HOH 36 815 815 HOH HOH B . H 5 HOH 37 816 816 HOH HOH B . H 5 HOH 38 817 817 HOH HOH B . H 5 HOH 39 825 825 HOH HOH B . H 5 HOH 40 826 826 HOH HOH B . H 5 HOH 41 828 828 HOH HOH B . H 5 HOH 42 832 832 HOH HOH B . H 5 HOH 43 834 834 HOH HOH B . H 5 HOH 44 838 838 HOH HOH B . H 5 HOH 45 844 844 HOH HOH B . H 5 HOH 46 849 849 HOH HOH B . H 5 HOH 47 854 854 HOH HOH B . H 5 HOH 48 861 861 HOH HOH B . H 5 HOH 49 862 862 HOH HOH B . H 5 HOH 50 867 867 HOH HOH B . H 5 HOH 51 872 872 HOH HOH B . H 5 HOH 52 878 878 HOH HOH B . H 5 HOH 53 880 880 HOH HOH B . H 5 HOH 54 890 890 HOH HOH B . H 5 HOH 55 896 896 HOH HOH B . H 5 HOH 56 898 898 HOH HOH B . H 5 HOH 57 916 916 HOH HOH B . H 5 HOH 58 919 919 HOH HOH B . H 5 HOH 59 925 925 HOH HOH B . H 5 HOH 60 929 929 HOH HOH B . H 5 HOH 61 931 931 HOH HOH B . H 5 HOH 62 943 943 HOH HOH B . I 5 HOH 1 715 715 HOH HOH C . I 5 HOH 2 717 717 HOH HOH C . I 5 HOH 3 718 718 HOH HOH C . I 5 HOH 4 729 729 HOH HOH C . I 5 HOH 5 738 738 HOH HOH C . I 5 HOH 6 739 739 HOH HOH C . I 5 HOH 7 741 741 HOH HOH C . I 5 HOH 8 751 751 HOH HOH C . I 5 HOH 9 754 754 HOH HOH C . I 5 HOH 10 765 765 HOH HOH C . I 5 HOH 11 767 767 HOH HOH C . I 5 HOH 12 769 769 HOH HOH C . I 5 HOH 13 770 770 HOH HOH C . I 5 HOH 14 773 773 HOH HOH C . I 5 HOH 15 776 776 HOH HOH C . I 5 HOH 16 777 777 HOH HOH C . I 5 HOH 17 783 783 HOH HOH C . I 5 HOH 18 790 790 HOH HOH C . I 5 HOH 19 794 794 HOH HOH C . I 5 HOH 20 797 797 HOH HOH C . I 5 HOH 21 809 809 HOH HOH C . I 5 HOH 22 810 810 HOH HOH C . I 5 HOH 23 813 813 HOH HOH C . I 5 HOH 24 818 818 HOH HOH C . I 5 HOH 25 820 820 HOH HOH C . I 5 HOH 26 829 829 HOH HOH C . I 5 HOH 27 837 837 HOH HOH C . I 5 HOH 28 843 843 HOH HOH C . I 5 HOH 29 850 850 HOH HOH C . I 5 HOH 30 853 853 HOH HOH C . I 5 HOH 31 856 856 HOH HOH C . I 5 HOH 32 860 860 HOH HOH C . I 5 HOH 33 865 865 HOH HOH C . I 5 HOH 34 866 866 HOH HOH C . I 5 HOH 35 871 871 HOH HOH C . I 5 HOH 36 884 884 HOH HOH C . I 5 HOH 37 885 885 HOH HOH C . I 5 HOH 38 886 886 HOH HOH C . I 5 HOH 39 887 887 HOH HOH C . I 5 HOH 40 888 888 HOH HOH C . I 5 HOH 41 891 891 HOH HOH C . I 5 HOH 42 911 911 HOH HOH C . I 5 HOH 43 918 918 HOH HOH C . I 5 HOH 44 924 924 HOH HOH C . J 5 HOH 1 705 705 HOH HOH D . J 5 HOH 2 716 716 HOH HOH D . J 5 HOH 3 720 720 HOH HOH D . J 5 HOH 4 736 736 HOH HOH D . J 5 HOH 5 737 737 HOH HOH D . J 5 HOH 6 748 748 HOH HOH D . J 5 HOH 7 761 761 HOH HOH D . J 5 HOH 8 762 762 HOH HOH D . J 5 HOH 9 768 768 HOH HOH D . J 5 HOH 10 772 772 HOH HOH D . J 5 HOH 11 787 787 HOH HOH D . J 5 HOH 12 812 812 HOH HOH D . J 5 HOH 13 821 821 HOH HOH D . J 5 HOH 14 827 827 HOH HOH D . J 5 HOH 15 847 847 HOH HOH D . J 5 HOH 16 882 882 HOH HOH D . J 5 HOH 17 910 910 HOH HOH D . J 5 HOH 18 914 914 HOH HOH D . J 5 HOH 19 915 915 HOH HOH D . J 5 HOH 20 934 934 HOH HOH D . J 5 HOH 21 938 938 HOH HOH D . J 5 HOH 22 940 940 HOH HOH D . J 5 HOH 23 942 942 HOH HOH D . K 5 HOH 1 702 702 HOH HOH E . K 5 HOH 2 706 706 HOH HOH E . K 5 HOH 3 713 713 HOH HOH E . K 5 HOH 4 726 726 HOH HOH E . K 5 HOH 5 750 750 HOH HOH E . K 5 HOH 6 752 752 HOH HOH E . K 5 HOH 7 756 756 HOH HOH E . K 5 HOH 8 757 757 HOH HOH E . K 5 HOH 9 774 774 HOH HOH E . K 5 HOH 10 780 780 HOH HOH E . K 5 HOH 11 802 802 HOH HOH E . K 5 HOH 12 822 822 HOH HOH E . K 5 HOH 13 840 840 HOH HOH E . K 5 HOH 14 857 857 HOH HOH E . K 5 HOH 15 859 859 HOH HOH E . K 5 HOH 16 863 863 HOH HOH E . K 5 HOH 17 873 873 HOH HOH E . K 5 HOH 18 879 879 HOH HOH E . K 5 HOH 19 883 883 HOH HOH E . K 5 HOH 20 889 889 HOH HOH E . K 5 HOH 21 899 899 HOH HOH E . K 5 HOH 22 901 901 HOH HOH E . K 5 HOH 23 906 906 HOH HOH E . K 5 HOH 24 908 908 HOH HOH E . K 5 HOH 25 912 912 HOH HOH E . K 5 HOH 26 922 922 HOH HOH E . K 5 HOH 27 923 923 HOH HOH E . K 5 HOH 28 927 927 HOH HOH E . K 5 HOH 29 928 928 HOH HOH E . K 5 HOH 30 935 935 HOH HOH E . K 5 HOH 31 937 937 HOH HOH E . K 5 HOH 32 941 941 HOH HOH E . L 5 HOH 1 725 725 HOH HOH F . L 5 HOH 2 733 733 HOH HOH F . L 5 HOH 3 734 734 HOH HOH F . L 5 HOH 4 759 759 HOH HOH F . L 5 HOH 5 775 775 HOH HOH F . L 5 HOH 6 779 779 HOH HOH F . L 5 HOH 7 786 786 HOH HOH F . L 5 HOH 8 788 788 HOH HOH F . L 5 HOH 9 791 791 HOH HOH F . L 5 HOH 10 830 830 HOH HOH F . L 5 HOH 11 851 851 HOH HOH F . L 5 HOH 12 852 852 HOH HOH F . L 5 HOH 13 870 870 HOH HOH F . L 5 HOH 14 875 875 HOH HOH F . L 5 HOH 15 895 895 HOH HOH F . L 5 HOH 16 902 902 HOH HOH F . L 5 HOH 17 926 926 HOH HOH F . L 5 HOH 18 933 933 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 22 ? CG ? A ARG 39 CG 2 1 Y 1 A ARG 22 ? CD ? A ARG 39 CD 3 1 Y 1 A ARG 22 ? NE ? A ARG 39 NE 4 1 Y 1 A ARG 22 ? CZ ? A ARG 39 CZ 5 1 Y 1 A ARG 22 ? NH1 ? A ARG 39 NH1 6 1 Y 1 A ARG 22 ? NH2 ? A ARG 39 NH2 7 1 Y 1 A GLU 33 ? CG ? A GLU 50 CG 8 1 Y 1 A GLU 33 ? CD ? A GLU 50 CD 9 1 Y 1 A GLU 33 ? OE1 ? A GLU 50 OE1 10 1 Y 1 A GLU 33 ? OE2 ? A GLU 50 OE2 11 1 Y 1 A GLN 36 ? CD ? A GLN 53 CD 12 1 Y 1 A GLN 36 ? OE1 ? A GLN 53 OE1 13 1 Y 1 A GLN 36 ? NE2 ? A GLN 53 NE2 14 1 Y 1 A ASN 39 ? CG ? A ASN 56 CG 15 1 Y 1 A ASN 39 ? OD1 ? A ASN 56 OD1 16 1 Y 1 A ASN 39 ? ND2 ? A ASN 56 ND2 17 1 Y 1 A LYS 58 ? CG ? A LYS 75 CG 18 1 Y 1 A LYS 58 ? CD ? A LYS 75 CD 19 1 Y 1 A LYS 58 ? CE ? A LYS 75 CE 20 1 Y 1 A LYS 58 ? NZ ? A LYS 75 NZ 21 1 Y 1 B GLU 33 ? CD ? B GLU 50 CD 22 1 Y 1 B GLU 33 ? OE1 ? B GLU 50 OE1 23 1 Y 1 B GLU 33 ? OE2 ? B GLU 50 OE2 24 1 Y 1 B GLN 36 ? CD ? B GLN 53 CD 25 1 Y 1 B GLN 36 ? OE1 ? B GLN 53 OE1 26 1 Y 1 B GLN 36 ? NE2 ? B GLN 53 NE2 27 1 Y 1 B ASN 39 ? OD1 ? B ASN 56 OD1 28 1 Y 1 B ASN 39 ? ND2 ? B ASN 56 ND2 29 1 Y 1 B ARG 55 ? CG ? B ARG 72 CG 30 1 Y 1 B ARG 55 ? CD ? B ARG 72 CD 31 1 Y 1 B ARG 55 ? NE ? B ARG 72 NE 32 1 Y 1 B ARG 55 ? CZ ? B ARG 72 CZ 33 1 Y 1 B ARG 55 ? NH1 ? B ARG 72 NH1 34 1 Y 1 B ARG 55 ? NH2 ? B ARG 72 NH2 35 1 Y 1 B LYS 58 ? O ? B LYS 75 O 36 1 Y 1 B LYS 58 ? CD ? B LYS 75 CD 37 1 Y 1 B LYS 58 ? CE ? B LYS 75 CE 38 1 Y 1 B LYS 58 ? NZ ? B LYS 75 NZ 39 1 Y 1 C LYS 0 ? CB ? C LYS 17 CB 40 1 Y 1 C LYS 0 ? CG ? C LYS 17 CG 41 1 Y 1 C LYS 0 ? CD ? C LYS 17 CD 42 1 Y 1 C LYS 0 ? CE ? C LYS 17 CE 43 1 Y 1 C LYS 0 ? NZ ? C LYS 17 NZ 44 1 Y 1 C GLN 24 ? CD ? C GLN 41 CD 45 1 Y 1 C GLN 24 ? OE1 ? C GLN 41 OE1 46 1 Y 1 C GLN 24 ? NE2 ? C GLN 41 NE2 47 1 Y 1 C ARG 57 ? CG ? C ARG 74 CG 48 1 Y 1 C ARG 57 ? CD ? C ARG 74 CD 49 1 Y 1 C ARG 57 ? NE ? C ARG 74 NE 50 1 Y 1 C ARG 57 ? CZ ? C ARG 74 CZ 51 1 Y 1 C ARG 57 ? NH1 ? C ARG 74 NH1 52 1 Y 1 C ARG 57 ? NH2 ? C ARG 74 NH2 53 1 Y 1 C LYS 58 ? CD ? C LYS 75 CD 54 1 Y 1 C LYS 58 ? CE ? C LYS 75 CE 55 1 Y 1 C LYS 58 ? NZ ? C LYS 75 NZ # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1FJL _cell.length_a 72.210 _cell.length_b 146.890 _cell.length_c 77.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FJL _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 # _exptl.entry_id 1FJL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_percent_sol 49.09 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1FJL _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1980000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1980000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE FOLLOWING SIDE CHAINS HAVE BEEN OMITTED FROM THE MODEL BECAUSE THEIR CONFORMATION WAS NOT EVIDENT FROM ELECTRON DENSITY MAPS: HOMEODOMAIN NO. 1: RESIDUES 122, 133, 158. HOMEODOMAIN NO. 2: RESIDUES 233, 236, 239, 255, 258. HOMEODOMAIN NO. 3: RESIDUES 300, 324, 357, 358. DUE TO THE TWO-FOLD AVERAGING OF THE DNA DUPLEXES, ALTERNATE SIDE CHAIN IDENTITIES HAVE BEEN MODELED IN THE FOLLOWING WAY: ALTERNATE SIDE CHAIN FOR RESIDUE A D 1A: RESIDUE T D 1B ALTERNATE SIDE CHAIN FOR RESIDUE T D 8A: RESIDUE A D 8B ALTERNATE SIDE CHAIN FOR RESIDUE T E 1A: RESIDUE A E 1B ALTERNATE SIDE CHAIN FOR RESIDUE A E 8A: RESIDUE T E 8B ALTERNATE SIDE CHAIN FOR RESIDUE T F 1A: RESIDUE A F 1B ALTERNATE SIDE CHAIN FOR RESIDUE T F 8A: RESIDUE A F 8B TWO OF THE WATER MOLECULES ARE EXCLUDED BY ONE OF THE TWO ALTERNATE SIDE CHAINS AT DNA RESIDUES NO. 408 AND 508, AS FOLLOWS: WATER RESIDUE NO. 941 IS PRESENT WITH THE ALTERNATE SIDE CHAIN REPRESENTED BY RESIDUE 508 BUT NOT 528. WATER RESIDUE NO. 942 IS PRESENT WITH THE ALTERNATE SIDE CHAIN REPRESENTED BY RESIDUE 428 BUT NOT 408. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1530 _refine_hist.pdbx_number_atoms_nucleic_acid 966 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 243 _refine_hist.number_atoms_total 2739 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na 0.018 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.80 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na 2.80 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot 1.51 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1FJL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1FJL _struct.title 'HOMEODOMAIN FROM THE DROSOPHILA PAIRED PROTEIN BOUND TO A DNA OLIGONUCLEOTIDE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FJL _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'DNA-BINDING PROTEIN, DNA, PAIRED BOX, TRANSCRIPTION REGULATION, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PRD_DROME 1 ? 196 P06601 ? 2 PDB 1FJL 2 ? ? 1FJL ? 3 PDB 1FJL 3 ? ? 1FJL ? 4 PDB 1FJL 4 ? ? 1FJL ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FJL A 1 ? 81 ? P06601 196 ? 276 ? -16 64 2 1 1FJL B 1 ? 81 ? P06601 196 ? 276 ? -16 64 3 1 1FJL C 1 ? 81 ? P06601 196 ? 276 ? -16 64 4 2 1FJL D 1 ? 14 ? 1FJL 1 ? 14 ? 1 14 5 3 1FJL E 1 ? 14 ? 1FJL 1 ? 14 ? 1 14 6 4 1FJL F 1 ? 14 ? 1FJL 1 ? 14 ? 1 14 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1FJL SER A 21 ? UNP P06601 CYS 216 'engineered mutation' 4 1 1 1FJL GLN A 67 ? UNP P06601 SER 262 'engineered mutation' 50 2 2 1FJL SER B 21 ? UNP P06601 CYS 216 'engineered mutation' 4 3 2 1FJL GLN B 67 ? UNP P06601 SER 262 'engineered mutation' 50 4 3 1FJL SER C 21 ? UNP P06601 CYS 216 'engineered mutation' 4 5 3 1FJL GLN C 67 ? UNP P06601 SER 262 'engineered mutation' 50 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E,G,H,J,K 2 1,2 C,F,I,L # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 146.8900000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ;A COMPLEX OF TWO HOMEODOMAINS (THE PROTEIN COMPONENT) BOUND TO ONE 14 BASE PAIR DNA DUPLEX IS THE MOLECULAR SPECIES ANALYZED IN THIS STUDY. EACH OF THE DNA DUPLEX AND THE COMPLEX HAS PSEUDO TWO-FOLD SYMMETRY ABOUT ITS CENTER. THE ASYMMETRIC UNIT CONTAINS 1.5 COMPLEXES, ONE OF WHICH IS COMPLETELY CONTAINED WITHIN THE ASYMMETRIC UNIT AND THE OTHER OF IS BISECTED AT ITS CENTER OF SYMMETRY BY A CRYSTALLOGRAPHIC TWO-FOLD AXIS. THE TWO-FOLD AVERAGED COMPLEX WAS MODELED AS A COMPLETE SINGLE HOMEODOMAIN AND A COMPLETE SINGLE STRAND OF THE DUPLEX. THEREFORE, THE MODEL CONTAINS THREE HOMEODOMAINS AND THREE DNA STRANDS. ; 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 27 ? ARG A 39 ? ALA A 10 ARG A 22 1 ? 13 HELX_P HELX_P2 2 ILE A 45 ? THR A 55 ? ILE A 28 THR A 38 1 ? 11 HELX_P HELX_P3 3 GLU A 59 ? VAL A 80 ? GLU A 42 VAL A 63 1 ? 22 HELX_P HELX_P4 4 ALA B 27 ? ARG B 39 ? ALA B 10 ARG B 22 1 ? 13 HELX_P HELX_P5 5 ILE B 45 ? THR B 55 ? ILE B 28 THR B 38 1 ? 11 HELX_P HELX_P6 6 GLU B 59 ? ARG B 74 ? GLU B 42 ARG B 57 1 ? 16 HELX_P HELX_P7 7 ALA C 27 ? ARG C 39 ? ALA C 10 ARG C 22 1 ? 13 HELX_P HELX_P8 8 ILE C 45 ? THR C 55 ? ILE C 28 THR C 38 1 ? 11 HELX_P HELX_P9 9 GLU C 59 ? ARG C 74 ? GLU C 42 ARG C 57 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? D DA 1 N1 A ? ? 1_555 F DT 1 N3 A ? D DA 1 F DT 1 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog2 hydrog ? ? D DA 2 N1 ? ? ? 1_555 E DT 14 N3 ? ? D DA 2 E DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DA 2 N6 ? ? ? 1_555 E DT 14 O4 ? ? D DA 2 E DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DT 3 N3 ? ? ? 1_555 E DA 13 N1 ? ? D DT 3 E DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DT 3 O4 ? ? ? 1_555 E DA 13 N6 ? ? D DT 3 E DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DA 4 N1 ? ? ? 1_555 E DT 12 N3 ? ? D DA 4 E DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DA 4 N6 ? ? ? 1_555 E DT 12 O4 ? ? D DA 4 E DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DA 5 N1 ? ? ? 1_555 E DT 11 N3 ? ? D DA 5 E DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DA 5 N6 ? ? ? 1_555 E DT 11 O4 ? ? D DA 5 E DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DT 6 N3 ? ? ? 1_555 E DA 10 N1 ? ? D DT 6 E DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DT 6 O4 ? ? ? 1_555 E DA 10 N6 ? ? D DT 6 E DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DC 7 N3 ? ? ? 1_555 E DG 9 N1 ? ? D DC 7 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DC 7 N4 ? ? ? 1_555 E DG 9 O6 ? ? D DC 7 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DC 7 O2 ? ? ? 1_555 E DG 9 N2 ? ? D DC 7 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D DT 8 N3 A ? ? 1_555 E DA 8 N1 A ? D DT 8 E DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DT 8 O4 A ? ? 1_555 E DA 8 N6 A ? D DT 8 E DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DG 9 N1 ? ? ? 1_555 E DC 7 N3 ? ? D DG 9 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DG 9 N2 ? ? ? 1_555 E DC 7 O2 ? ? D DG 9 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DG 9 O6 ? ? ? 1_555 E DC 7 N4 ? ? D DG 9 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DA 10 N1 ? ? ? 1_555 E DT 6 N3 ? ? D DA 10 E DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DA 10 N6 ? ? ? 1_555 E DT 6 O4 ? ? D DA 10 E DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DT 11 N3 ? ? ? 1_555 E DA 5 N1 ? ? D DT 11 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DT 11 O4 ? ? ? 1_555 E DA 5 N6 ? ? D DT 11 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DT 12 N3 ? ? ? 1_555 E DA 4 N1 ? ? D DT 12 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DT 12 O4 ? ? ? 1_555 E DA 4 N6 ? ? D DT 12 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DA 13 N1 ? ? ? 1_555 E DT 3 N3 ? ? D DA 13 E DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DA 13 N6 ? ? ? 1_555 E DT 3 O4 ? ? D DA 13 E DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D DC 14 N3 ? ? ? 1_555 E DG 2 N1 ? ? D DC 14 E DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D DC 14 N4 ? ? ? 1_555 E DG 2 O6 ? ? D DC 14 E DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D DC 14 O2 ? ? ? 1_555 E DG 2 N2 ? ? D DC 14 E DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? F DG 2 N1 ? ? ? 1_555 F DC 14 N3 ? ? F DG 2 F DC 14 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? F DG 2 N2 ? ? ? 1_555 F DC 14 O2 ? ? F DG 2 F DC 14 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? F DG 2 O6 ? ? ? 1_555 F DC 14 N4 ? ? F DG 2 F DC 14 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? F DT 3 N3 ? ? ? 1_555 F DA 13 N1 ? ? F DT 3 F DA 13 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? F DT 3 O4 ? ? ? 1_555 F DA 13 N6 ? ? F DT 3 F DA 13 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? F DA 4 N1 ? ? ? 1_555 F DT 12 N3 ? ? F DA 4 F DT 12 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? F DA 4 N6 ? ? ? 1_555 F DT 12 O4 ? ? F DA 4 F DT 12 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? F DA 5 N1 ? ? ? 1_555 F DT 11 N3 ? ? F DA 5 F DT 11 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? F DA 5 N6 ? ? ? 1_555 F DT 11 O4 ? ? F DA 5 F DT 11 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? F DT 6 N3 ? ? ? 1_555 F DA 10 N1 ? ? F DT 6 F DA 10 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? F DT 6 O4 ? ? ? 1_555 F DA 10 N6 ? ? F DT 6 F DA 10 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? F DC 7 N3 ? ? ? 1_555 F DG 9 N1 ? ? F DC 7 F DG 9 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? F DC 7 N4 ? ? ? 1_555 F DG 9 O6 ? ? F DC 7 F DG 9 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? F DC 7 O2 ? ? ? 1_555 F DG 9 N2 ? ? F DC 7 F DG 9 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? F DG 9 N1 ? ? ? 1_555 F DC 7 N3 ? ? F DG 9 F DC 7 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? F DG 9 N2 ? ? ? 1_555 F DC 7 O2 ? ? F DG 9 F DC 7 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? F DG 9 O6 ? ? ? 1_555 F DC 7 N4 ? ? F DG 9 F DC 7 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? F DA 10 N1 ? ? ? 1_555 F DT 6 N3 ? ? F DA 10 F DT 6 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? F DA 10 N6 ? ? ? 1_555 F DT 6 O4 ? ? F DA 10 F DT 6 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? F DT 11 N3 ? ? ? 1_555 F DA 5 N1 ? ? F DT 11 F DA 5 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? F DT 11 O4 ? ? ? 1_555 F DA 5 N6 ? ? F DT 11 F DA 5 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? F DT 12 N3 ? ? ? 1_555 F DA 4 N1 ? ? F DT 12 F DA 4 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? F DT 12 O4 ? ? ? 1_555 F DA 4 N6 ? ? F DT 12 F DA 4 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? F DA 13 N1 ? ? ? 1_555 F DT 3 N3 ? ? F DA 13 F DT 3 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? F DA 13 N6 ? ? ? 1_555 F DT 3 O4 ? ? F DA 13 F DT 3 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? F DC 14 N3 ? ? ? 1_555 F DG 2 N1 ? ? F DC 14 F DG 2 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? F DC 14 N4 ? ? ? 1_555 F DG 2 O6 ? ? F DC 14 F DG 2 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? F DC 14 O2 ? ? ? 1_555 F DG 2 N2 ? ? F DC 14 F DG 2 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OP1 _pdbx_validate_symm_contact.auth_asym_id_1 D _pdbx_validate_symm_contact.auth_comp_id_1 DA _pdbx_validate_symm_contact.auth_seq_id_1 8 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 B _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 858 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_565 _pdbx_validate_symm_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N9 D DA 1 ? A C4 D DA 1 ? A 1.334 1.374 -0.040 0.006 N 2 1 C5 D DT 1 ? B C7 D DT 1 ? B 1.534 1.496 0.038 0.006 N 3 1 "C5'" D DA 2 ? ? "C4'" D DA 2 ? ? 1.583 1.512 0.071 0.007 N 4 1 "O3'" D DT 3 ? ? "C3'" D DT 3 ? ? 1.376 1.419 -0.043 0.006 N 5 1 C5 D DT 6 ? ? C7 D DT 6 ? ? 1.551 1.496 0.055 0.006 N 6 1 "O3'" D DC 7 ? ? P D DA 8 ? B 1.346 1.607 -0.261 0.012 Y 7 1 "C5'" D DA 8 ? B "C4'" D DA 8 ? B 1.561 1.512 0.049 0.007 N 8 1 "C4'" D DG 9 ? ? "C3'" D DG 9 ? ? 1.459 1.521 -0.062 0.010 N 9 1 C5 E DT 1 ? A C7 E DT 1 ? A 1.534 1.496 0.038 0.006 N 10 1 "O3'" E DA 1 ? B P E DG 2 ? ? 1.504 1.607 -0.103 0.012 Y 11 1 C5 E DT 3 ? ? C7 E DT 3 ? ? 1.544 1.496 0.048 0.006 N 12 1 N3 E DA 4 ? ? C4 E DA 4 ? ? 1.403 1.344 0.059 0.006 N 13 1 "C5'" E DC 7 ? ? "C4'" E DC 7 ? ? 1.560 1.512 0.048 0.007 N 14 1 "O3'" E DC 7 ? ? P E DT 8 ? B 1.767 1.607 0.160 0.012 Y 15 1 C5 E DT 8 ? B C7 E DT 8 ? B 1.555 1.496 0.059 0.006 N 16 1 "O3'" E DT 8 ? B P E DG 9 ? ? 1.533 1.607 -0.074 0.012 Y 17 1 N3 E DA 10 ? ? C4 E DA 10 ? ? 1.380 1.344 0.036 0.006 N 18 1 N9 E DA 10 ? ? C4 E DA 10 ? ? 1.414 1.374 0.040 0.006 N 19 1 "C5'" F DA 1 ? B "C4'" F DA 1 ? B 1.564 1.512 0.052 0.007 N 20 1 "O3'" F DA 1 ? B P F DG 2 ? ? 1.516 1.607 -0.091 0.012 Y 21 1 C6 F DG 2 ? ? N1 F DG 2 ? ? 1.329 1.391 -0.062 0.007 N 22 1 N3 F DA 4 ? ? C4 F DA 4 ? ? 1.386 1.344 0.042 0.006 N 23 1 C5 F DT 6 ? ? C7 F DT 6 ? ? 1.554 1.496 0.058 0.006 N 24 1 "O3'" F DC 7 ? ? P F DA 8 ? B 1.784 1.607 0.177 0.012 Y 25 1 C5 F DT 8 ? A C7 F DT 8 ? A 1.532 1.496 0.036 0.006 N 26 1 "O3'" F DA 8 ? B P F DG 9 ? ? 1.756 1.607 0.149 0.012 Y 27 1 "O3'" F DA 13 ? ? "C3'" F DA 13 ? ? 1.362 1.419 -0.057 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 3 ? ? CZ B ARG 3 ? ? NH1 B ARG 3 ? ? 123.81 120.30 3.51 0.50 N 2 1 "O4'" D DA 1 ? A "C1'" D DA 1 ? A N9 D DA 1 ? A 113.13 108.30 4.83 0.30 N 3 1 N1 D DA 1 ? A C2 D DA 1 ? A N3 D DA 1 ? A 132.56 129.30 3.26 0.50 N 4 1 N1 D DT 1 ? B C2 D DT 1 ? B N3 D DT 1 ? B 118.55 114.60 3.95 0.60 N 5 1 "C3'" D DT 1 ? B "O3'" D DT 1 ? B P D DA 2 ? ? 100.13 119.70 -19.57 1.20 Y 6 1 "O3'" D DT 1 ? B P D DA 2 ? ? OP2 D DA 2 ? ? 122.09 110.50 11.59 1.10 Y 7 1 "O4'" D DA 2 ? ? "C1'" D DA 2 ? ? N9 D DA 2 ? ? 101.80 108.00 -6.20 0.70 N 8 1 C4 D DT 3 ? ? C5 D DT 3 ? ? C6 D DT 3 ? ? 122.31 118.00 4.31 0.60 N 9 1 C5 D DT 3 ? ? C6 D DT 3 ? ? N1 D DT 3 ? ? 119.84 123.70 -3.86 0.60 N 10 1 N3 D DT 3 ? ? C2 D DT 3 ? ? O2 D DT 3 ? ? 118.42 122.30 -3.88 0.60 N 11 1 "O4'" D DA 5 ? ? "C4'" D DA 5 ? ? "C3'" D DA 5 ? ? 109.77 106.00 3.77 0.60 N 12 1 C4 D DT 6 ? ? C5 D DT 6 ? ? C7 D DT 6 ? ? 123.82 119.00 4.82 0.60 N 13 1 C6 D DT 6 ? ? C5 D DT 6 ? ? C7 D DT 6 ? ? 117.04 122.90 -5.86 0.60 N 14 1 N3 D DC 7 ? ? C4 D DC 7 ? ? C5 D DC 7 ? ? 119.46 121.90 -2.44 0.40 N 15 1 "C3'" D DC 7 ? ? "O3'" D DC 7 ? ? P D DA 8 ? B 146.96 119.70 27.26 1.20 Y 16 1 "O4'" D DA 8 ? B "C1'" D DA 8 ? B N9 D DA 8 ? B 98.99 108.00 -9.01 0.70 N 17 1 "O3'" D DA 8 ? B P D DG 9 ? ? "O5'" D DG 9 ? ? 133.88 104.00 29.88 1.90 Y 18 1 "O3'" D DA 8 ? B P D DG 9 ? ? OP1 D DG 9 ? ? 75.19 105.20 -30.01 2.20 Y 19 1 "C5'" D DG 9 ? ? "C4'" D DG 9 ? ? "O4'" D DG 9 ? ? 117.09 109.80 7.29 1.10 N 20 1 "O4'" D DG 9 ? ? "C1'" D DG 9 ? ? N9 D DG 9 ? ? 115.97 108.30 7.67 0.30 N 21 1 N3 D DG 9 ? ? C4 D DG 9 ? ? C5 D DG 9 ? ? 125.33 128.60 -3.27 0.50 N 22 1 N9 D DG 9 ? ? C4 D DG 9 ? ? C5 D DG 9 ? ? 107.88 105.40 2.48 0.40 N 23 1 N1 D DG 9 ? ? C6 D DG 9 ? ? O6 D DG 9 ? ? 115.65 119.90 -4.25 0.60 N 24 1 P D DA 10 ? ? "O5'" D DA 10 ? ? "C5'" D DA 10 ? ? 111.01 120.90 -9.89 1.60 N 25 1 "O4'" D DA 10 ? ? "C1'" D DA 10 ? ? N9 D DA 10 ? ? 116.86 108.30 8.56 0.30 N 26 1 C4 D DT 11 ? ? C5 D DT 11 ? ? C6 D DT 11 ? ? 122.17 118.00 4.17 0.60 N 27 1 C6 D DT 11 ? ? C5 D DT 11 ? ? C7 D DT 11 ? ? 118.44 122.90 -4.46 0.60 N 28 1 C4 D DT 12 ? ? C5 D DT 12 ? ? C6 D DT 12 ? ? 121.64 118.00 3.64 0.60 N 29 1 "C3'" D DA 13 ? ? "C2'" D DA 13 ? ? "C1'" D DA 13 ? ? 97.06 102.40 -5.34 0.80 N 30 1 "O4'" D DA 13 ? ? "C1'" D DA 13 ? ? "C2'" D DA 13 ? ? 100.03 105.90 -5.87 0.80 N 31 1 "O4'" D DC 14 ? ? "C1'" D DC 14 ? ? "C2'" D DC 14 ? ? 98.04 105.90 -7.86 0.80 N 32 1 "O4'" D DC 14 ? ? "C1'" D DC 14 ? ? N1 D DC 14 ? ? 115.40 108.30 7.10 0.30 N 33 1 C6 E DT 1 ? A C5 E DT 1 ? A C7 E DT 1 ? A 117.40 122.90 -5.50 0.60 N 34 1 "C3'" E DT 1 ? A "O3'" E DT 1 ? A P E DG 2 ? ? 109.57 119.70 -10.13 1.20 Y 35 1 "C3'" E DA 1 ? B "O3'" E DA 1 ? B P E DG 2 ? ? 104.25 119.70 -15.45 1.20 Y 36 1 "O4'" E DG 2 ? ? "C1'" E DG 2 ? ? "C2'" E DG 2 ? ? 109.95 106.80 3.15 0.50 N 37 1 "C3'" E DG 2 ? ? "O3'" E DG 2 ? ? P E DT 3 ? ? 127.96 119.70 8.26 1.20 Y 38 1 "O4'" E DT 3 ? ? "C1'" E DT 3 ? ? N1 E DT 3 ? ? 115.10 108.30 6.80 0.30 N 39 1 C6 E DT 3 ? ? C5 E DT 3 ? ? C7 E DT 3 ? ? 118.21 122.90 -4.69 0.60 N 40 1 "O4'" E DA 4 ? ? "C1'" E DA 4 ? ? N9 E DA 4 ? ? 111.09 108.30 2.79 0.30 N 41 1 "O4'" E DA 5 ? ? "C1'" E DA 5 ? ? "C2'" E DA 5 ? ? 98.18 105.90 -7.72 0.80 N 42 1 "C1'" E DT 6 ? ? "O4'" E DT 6 ? ? "C4'" E DT 6 ? ? 101.55 110.10 -8.55 1.00 N 43 1 "O4'" E DT 6 ? ? "C1'" E DT 6 ? ? "C2'" E DT 6 ? ? 100.45 105.90 -5.45 0.80 N 44 1 C4 E DT 6 ? ? C5 E DT 6 ? ? C6 E DT 6 ? ? 122.75 118.00 4.75 0.60 N 45 1 C6 E DT 6 ? ? C5 E DT 6 ? ? C7 E DT 6 ? ? 117.84 122.90 -5.06 0.60 N 46 1 "C1'" E DC 7 ? ? "O4'" E DC 7 ? ? "C4'" E DC 7 ? ? 101.62 110.10 -8.48 1.00 N 47 1 "C3'" E DC 7 ? ? "O3'" E DC 7 ? ? P E DA 8 ? A 127.55 119.70 7.85 1.20 Y 48 1 "C3'" E DC 7 ? ? "O3'" E DC 7 ? ? P E DT 8 ? B 110.73 119.70 -8.97 1.20 Y 49 1 N3 E DT 8 ? B C2 E DT 8 ? B O2 E DT 8 ? B 118.50 122.30 -3.80 0.60 N 50 1 C6 E DT 8 ? B C5 E DT 8 ? B C7 E DT 8 ? B 118.37 122.90 -4.53 0.60 N 51 1 "O3'" E DT 8 ? B P E DG 9 ? ? "O5'" E DG 9 ? ? 115.42 104.00 11.42 1.90 Y 52 1 "O4'" E DG 9 ? ? "C1'" E DG 9 ? ? "C2'" E DG 9 ? ? 100.47 105.90 -5.43 0.80 N 53 1 "C3'" E DG 9 ? ? "O3'" E DG 9 ? ? P E DA 10 ? ? 131.17 119.70 11.47 1.20 Y 54 1 "O5'" E DA 10 ? ? P E DA 10 ? ? OP2 E DA 10 ? ? 99.97 105.70 -5.73 0.90 N 55 1 "O5'" E DA 10 ? ? "C5'" E DA 10 ? ? "C4'" E DA 10 ? ? 103.24 109.40 -6.16 0.80 N 56 1 "C1'" E DA 10 ? ? "O4'" E DA 10 ? ? "C4'" E DA 10 ? ? 104.07 110.10 -6.03 1.00 N 57 1 C4 E DT 11 ? ? C5 E DT 11 ? ? C6 E DT 11 ? ? 121.72 118.00 3.72 0.60 N 58 1 C4 E DT 11 ? ? C5 E DT 11 ? ? C7 E DT 11 ? ? 115.40 119.00 -3.60 0.60 N 59 1 "C3'" E DT 11 ? ? "O3'" E DT 11 ? ? P E DT 12 ? ? 128.49 119.70 8.79 1.20 Y 60 1 "O4'" E DT 12 ? ? "C1'" E DT 12 ? ? N1 E DT 12 ? ? 101.95 108.00 -6.05 0.70 N 61 1 C4 E DT 12 ? ? C5 E DT 12 ? ? C6 E DT 12 ? ? 121.99 118.00 3.99 0.60 N 62 1 N3 E DT 12 ? ? C2 E DT 12 ? ? O2 E DT 12 ? ? 118.52 122.30 -3.78 0.60 N 63 1 C6 E DT 12 ? ? C5 E DT 12 ? ? C7 E DT 12 ? ? 118.40 122.90 -4.50 0.60 N 64 1 "C3'" E DA 13 ? ? "C2'" E DA 13 ? ? "C1'" E DA 13 ? ? 95.19 102.40 -7.21 0.80 N 65 1 "O4'" E DA 13 ? ? "C1'" E DA 13 ? ? "C2'" E DA 13 ? ? 96.64 105.90 -9.26 0.80 N 66 1 "O4'" E DA 13 ? ? "C1'" E DA 13 ? ? N9 E DA 13 ? ? 113.92 108.30 5.62 0.30 N 67 1 "O4'" F DT 1 ? A "C1'" F DT 1 ? A N1 F DT 1 ? A 112.60 108.30 4.30 0.30 N 68 1 "O4'" F DA 1 ? B "C4'" F DA 1 ? B "C3'" F DA 1 ? B 101.94 104.50 -2.56 0.40 N 69 1 C2 F DA 1 ? B N3 F DA 1 ? B C4 F DA 1 ? B 107.59 110.60 -3.01 0.50 N 70 1 "C3'" F DA 1 ? B "O3'" F DA 1 ? B P F DG 2 ? ? 110.73 119.70 -8.97 1.20 Y 71 1 "O3'" F DA 1 ? B P F DG 2 ? ? "O5'" F DG 2 ? ? 125.83 104.00 21.83 1.90 Y 72 1 "O3'" F DA 1 ? B P F DG 2 ? ? OP1 F DG 2 ? ? 82.03 105.20 -23.17 2.20 Y 73 1 "C1'" F DG 2 ? ? "O4'" F DG 2 ? ? "C4'" F DG 2 ? ? 103.66 110.10 -6.44 1.00 N 74 1 "O4'" F DG 2 ? ? "C1'" F DG 2 ? ? "C2'" F DG 2 ? ? 100.10 105.90 -5.80 0.80 N 75 1 N9 F DG 2 ? ? "C1'" F DG 2 ? ? "C2'" F DG 2 ? ? 122.90 114.30 8.60 1.40 N 76 1 "O4'" F DG 2 ? ? "C1'" F DG 2 ? ? N9 F DG 2 ? ? 102.22 108.00 -5.78 0.70 N 77 1 N9 F DG 2 ? ? C4 F DG 2 ? ? C5 F DG 2 ? ? 107.88 105.40 2.48 0.40 N 78 1 C5 F DG 2 ? ? C6 F DG 2 ? ? O6 F DG 2 ? ? 133.14 128.60 4.54 0.60 N 79 1 "O4'" F DT 3 ? ? "C1'" F DT 3 ? ? N1 F DT 3 ? ? 113.52 108.30 5.22 0.30 N 80 1 C4 F DT 3 ? ? C5 F DT 3 ? ? C6 F DT 3 ? ? 122.61 118.00 4.61 0.60 N 81 1 N3 F DT 3 ? ? C4 F DT 3 ? ? O4 F DT 3 ? ? 123.70 119.90 3.80 0.60 N 82 1 C4 F DT 3 ? ? C5 F DT 3 ? ? C7 F DT 3 ? ? 114.80 119.00 -4.20 0.60 N 83 1 "C3'" F DA 4 ? ? "C2'" F DA 4 ? ? "C1'" F DA 4 ? ? 96.46 102.40 -5.94 0.80 N 84 1 "O4'" F DA 5 ? ? "C1'" F DA 5 ? ? "C2'" F DA 5 ? ? 100.22 105.90 -5.68 0.80 N 85 1 "O4'" F DT 6 ? ? "C1'" F DT 6 ? ? "C2'" F DT 6 ? ? 100.72 105.90 -5.18 0.80 N 86 1 "O4'" F DT 6 ? ? "C1'" F DT 6 ? ? N1 F DT 6 ? ? 112.17 108.30 3.87 0.30 N 87 1 C4 F DT 6 ? ? C5 F DT 6 ? ? C6 F DT 6 ? ? 122.23 118.00 4.23 0.60 N 88 1 "O4'" F DC 7 ? ? "C4'" F DC 7 ? ? "C3'" F DC 7 ? ? 98.76 104.50 -5.74 0.40 N 89 1 "C1'" F DC 7 ? ? "O4'" F DC 7 ? ? "C4'" F DC 7 ? ? 102.97 110.10 -7.13 1.00 N 90 1 "O4'" F DT 8 ? A "C1'" F DT 8 ? A "C2'" F DT 8 ? A 99.44 105.90 -6.46 0.80 N 91 1 "O4'" F DA 8 ? B "C1'" F DA 8 ? B N9 F DA 8 ? B 103.50 108.00 -4.50 0.70 N 92 1 "O3'" F DT 8 ? A P F DG 9 ? ? "O5'" F DG 9 ? ? 90.29 104.00 -13.71 1.90 Y 93 1 "O3'" F DA 8 ? B P F DG 9 ? ? "O5'" F DG 9 ? ? 132.40 104.00 28.40 1.90 Y 94 1 "O3'" F DA 8 ? B P F DG 9 ? ? OP2 F DG 9 ? ? 90.35 105.20 -14.85 2.20 Y 95 1 "O3'" F DA 8 ? B P F DG 9 ? ? OP1 F DG 9 ? ? 88.89 105.20 -16.31 2.20 Y 96 1 "C1'" F DG 9 ? ? "O4'" F DG 9 ? ? "C4'" F DG 9 ? ? 101.74 110.10 -8.36 1.00 N 97 1 "O4'" F DG 9 ? ? "C1'" F DG 9 ? ? "C2'" F DG 9 ? ? 94.22 105.90 -11.68 0.80 N 98 1 "O4'" F DG 9 ? ? "C1'" F DG 9 ? ? N9 F DG 9 ? ? 111.48 108.30 3.18 0.30 N 99 1 "C1'" F DA 10 ? ? "O4'" F DA 10 ? ? "C4'" F DA 10 ? ? 102.34 110.10 -7.76 1.00 N 100 1 "C1'" F DT 11 ? ? "O4'" F DT 11 ? ? "C4'" F DT 11 ? ? 99.08 110.10 -11.02 1.00 N 101 1 C6 F DT 11 ? ? C5 F DT 11 ? ? C7 F DT 11 ? ? 118.74 122.90 -4.16 0.60 N 102 1 "O4'" F DT 12 ? ? "C1'" F DT 12 ? ? N1 F DT 12 ? ? 99.57 108.00 -8.43 0.70 N 103 1 C4 F DT 12 ? ? C5 F DT 12 ? ? C6 F DT 12 ? ? 122.57 118.00 4.57 0.60 N 104 1 "O4'" F DA 13 ? ? "C1'" F DA 13 ? ? "C2'" F DA 13 ? ? 99.10 105.90 -6.80 0.80 N 105 1 "O4'" F DA 13 ? ? "C1'" F DA 13 ? ? N9 F DA 13 ? ? 111.09 108.30 2.79 0.30 N 106 1 "O4'" F DC 14 ? ? "C1'" F DC 14 ? ? "C2'" F DC 14 ? ? 100.05 105.90 -5.85 0.80 N 107 1 "O4'" F DC 14 ? ? "C1'" F DC 14 ? ? N1 F DC 14 ? ? 110.56 108.30 2.26 0.30 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DT _pdbx_validate_planes.auth_asym_id E _pdbx_validate_planes.auth_seq_id 12 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.063 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 "O3'" D DC 7 ? ? P D DA 8 ? B 1.35 2 1 "O3'" E DC 7 ? ? P E DT 8 ? B 1.77 3 1 "O3'" F DC 7 ? ? P F DA 8 ? B 1.78 4 1 "O3'" F DA 8 ? B P F DG 9 ? ? 1.76 # _pdbx_entry_details.entry_id 1FJL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE STANDARD HOMEODOMAIN NUMBERING SYSTEM (SEE, FOR EXAMPLE, KISSINGER, C.R., LIU, B., MARTIN-BLANCO, E., KORNBERG, T.B. AND PABO, C.O. (1990). CELL 63, 357 - 590) RELATES TO THE NUMBERING OF THE RESIDUES OF THE THREE HOMEODOMAINS IN THIS STRUCTURE IN THE FOLLOWING WAY: THE HOMEODOMAIN IS A 60 AMINO ACID MOTIF AND IS REFERRED TO HEREAFTER AS THE "HOMEODOMAIN PROPER". THE PROTEIN THAT WAS CRYSTALLIZED CONTAINS 17 ENDOGENOUS AMINO ACIDS UPSTREAM AND 4 AMINO ACIDS DOWNSTREAM OF THE 60 AMINO ACID HOMEODOMAIN PROPER. FOR EACH OF THE HOMEODOMAINS, THE RESIDUES ARE NUMBERED AS FOLLOWS, WITH SEGMENT IDENTIFIERS AS INDICATED: HOMEODOMAIN NO. 1: RESIDUES A 0 - A 64, WHERE RESIDUES A 1 - A 60 CORRESPOND TO THE HOMEODOMAIN PROPER. HOMEODOMAIN NO. 2: RESIDUES B 1 - B 58, WHERE RESIDUES B 1 - B 58 CORRESPOND TO THE HOMEODOMAIN PROPER (THE LAST 2 RESIDUES ARE DISORDERED AND SO NOT IN THE MODEL). HOMEODOMAIN NO. 3: RESIDUES C 0 - C 58, WHERE RESIDUES C 1 - C 58 CORRESPOND TO THE HOMEODOMAIN PROPER (THE LAST 2 RESIDUES ARE DISORDERED AND SO NOT IN THE MODEL). ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU -16 ? A GLU 1 2 1 Y 1 A ASP -15 ? A ASP 2 3 1 Y 1 A ILE -14 ? A ILE 3 4 1 Y 1 A SER -13 ? A SER 4 5 1 Y 1 A ASP -12 ? A ASP 5 6 1 Y 1 A CYS -11 ? A CYS 6 7 1 Y 1 A GLU -10 ? A GLU 7 8 1 Y 1 A SER -9 ? A SER 8 9 1 Y 1 A GLU -8 ? A GLU 9 10 1 Y 1 A PRO -7 ? A PRO 10 11 1 Y 1 A GLY -6 ? A GLY 11 12 1 Y 1 A ILE -5 ? A ILE 12 13 1 Y 1 A ALA -4 ? A ALA 13 14 1 Y 1 A LEU -3 ? A LEU 14 15 1 Y 1 A LYS -2 ? A LYS 15 16 1 Y 1 A ARG -1 ? A ARG 16 17 1 Y 1 B GLU -16 ? B GLU 1 18 1 Y 1 B ASP -15 ? B ASP 2 19 1 Y 1 B ILE -14 ? B ILE 3 20 1 Y 1 B SER -13 ? B SER 4 21 1 Y 1 B ASP -12 ? B ASP 5 22 1 Y 1 B CYS -11 ? B CYS 6 23 1 Y 1 B GLU -10 ? B GLU 7 24 1 Y 1 B SER -9 ? B SER 8 25 1 Y 1 B GLU -8 ? B GLU 9 26 1 Y 1 B PRO -7 ? B PRO 10 27 1 Y 1 B GLY -6 ? B GLY 11 28 1 Y 1 B ILE -5 ? B ILE 12 29 1 Y 1 B ALA -4 ? B ALA 13 30 1 Y 1 B LEU -3 ? B LEU 14 31 1 Y 1 B LYS -2 ? B LYS 15 32 1 Y 1 B ARG -1 ? B ARG 16 33 1 Y 1 B LYS 0 ? B LYS 17 34 1 Y 1 B GLN 59 ? B GLN 76 35 1 Y 1 B HIS 60 ? B HIS 77 36 1 Y 1 B THR 61 ? B THR 78 37 1 Y 1 B SER 62 ? B SER 79 38 1 Y 1 B VAL 63 ? B VAL 80 39 1 Y 1 B SER 64 ? B SER 81 40 1 Y 1 C GLU -16 ? C GLU 1 41 1 Y 1 C ASP -15 ? C ASP 2 42 1 Y 1 C ILE -14 ? C ILE 3 43 1 Y 1 C SER -13 ? C SER 4 44 1 Y 1 C ASP -12 ? C ASP 5 45 1 Y 1 C CYS -11 ? C CYS 6 46 1 Y 1 C GLU -10 ? C GLU 7 47 1 Y 1 C SER -9 ? C SER 8 48 1 Y 1 C GLU -8 ? C GLU 9 49 1 Y 1 C PRO -7 ? C PRO 10 50 1 Y 1 C GLY -6 ? C GLY 11 51 1 Y 1 C ILE -5 ? C ILE 12 52 1 Y 1 C ALA -4 ? C ALA 13 53 1 Y 1 C LEU -3 ? C LEU 14 54 1 Y 1 C LYS -2 ? C LYS 15 55 1 Y 1 C ARG -1 ? C ARG 16 56 1 Y 1 C GLN 59 ? C GLN 76 57 1 Y 1 C HIS 60 ? C HIS 77 58 1 Y 1 C THR 61 ? C THR 78 59 1 Y 1 C SER 62 ? C SER 79 60 1 Y 1 C VAL 63 ? C VAL 80 61 1 Y 1 C SER 64 ? C SER 81 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 PHE N N N N 373 PHE CA C N S 374 PHE C C N N 375 PHE O O N N 376 PHE CB C N N 377 PHE CG C Y N 378 PHE CD1 C Y N 379 PHE CD2 C Y N 380 PHE CE1 C Y N 381 PHE CE2 C Y N 382 PHE CZ C Y N 383 PHE OXT O N N 384 PHE H H N N 385 PHE H2 H N N 386 PHE HA H N N 387 PHE HB2 H N N 388 PHE HB3 H N N 389 PHE HD1 H N N 390 PHE HD2 H N N 391 PHE HE1 H N N 392 PHE HE2 H N N 393 PHE HZ H N N 394 PHE HXT H N N 395 PRO N N N N 396 PRO CA C N S 397 PRO C C N N 398 PRO O O N N 399 PRO CB C N N 400 PRO CG C N N 401 PRO CD C N N 402 PRO OXT O N N 403 PRO H H N N 404 PRO HA H N N 405 PRO HB2 H N N 406 PRO HB3 H N N 407 PRO HG2 H N N 408 PRO HG3 H N N 409 PRO HD2 H N N 410 PRO HD3 H N N 411 PRO HXT H N N 412 SER N N N N 413 SER CA C N S 414 SER C C N N 415 SER O O N N 416 SER CB C N N 417 SER OG O N N 418 SER OXT O N N 419 SER H H N N 420 SER H2 H N N 421 SER HA H N N 422 SER HB2 H N N 423 SER HB3 H N N 424 SER HG H N N 425 SER HXT H N N 426 THR N N N N 427 THR CA C N S 428 THR C C N N 429 THR O O N N 430 THR CB C N R 431 THR OG1 O N N 432 THR CG2 C N N 433 THR OXT O N N 434 THR H H N N 435 THR H2 H N N 436 THR HA H N N 437 THR HB H N N 438 THR HG1 H N N 439 THR HG21 H N N 440 THR HG22 H N N 441 THR HG23 H N N 442 THR HXT H N N 443 TRP N N N N 444 TRP CA C N S 445 TRP C C N N 446 TRP O O N N 447 TRP CB C N N 448 TRP CG C Y N 449 TRP CD1 C Y N 450 TRP CD2 C Y N 451 TRP NE1 N Y N 452 TRP CE2 C Y N 453 TRP CE3 C Y N 454 TRP CZ2 C Y N 455 TRP CZ3 C Y N 456 TRP CH2 C Y N 457 TRP OXT O N N 458 TRP H H N N 459 TRP H2 H N N 460 TRP HA H N N 461 TRP HB2 H N N 462 TRP HB3 H N N 463 TRP HD1 H N N 464 TRP HE1 H N N 465 TRP HE3 H N N 466 TRP HZ2 H N N 467 TRP HZ3 H N N 468 TRP HH2 H N N 469 TRP HXT H N N 470 TYR N N N N 471 TYR CA C N S 472 TYR C C N N 473 TYR O O N N 474 TYR CB C N N 475 TYR CG C Y N 476 TYR CD1 C Y N 477 TYR CD2 C Y N 478 TYR CE1 C Y N 479 TYR CE2 C Y N 480 TYR CZ C Y N 481 TYR OH O N N 482 TYR OXT O N N 483 TYR H H N N 484 TYR H2 H N N 485 TYR HA H N N 486 TYR HB2 H N N 487 TYR HB3 H N N 488 TYR HD1 H N N 489 TYR HD2 H N N 490 TYR HE1 H N N 491 TYR HE2 H N N 492 TYR HH H N N 493 TYR HXT H N N 494 VAL N N N N 495 VAL CA C N S 496 VAL C C N N 497 VAL O O N N 498 VAL CB C N N 499 VAL CG1 C N N 500 VAL CG2 C N N 501 VAL OXT O N N 502 VAL H H N N 503 VAL H2 H N N 504 VAL HA H N N 505 VAL HB H N N 506 VAL HG11 H N N 507 VAL HG12 H N N 508 VAL HG13 H N N 509 VAL HG21 H N N 510 VAL HG22 H N N 511 VAL HG23 H N N 512 VAL HXT H N N 513 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 PHE N CA sing N N 367 PHE N H sing N N 368 PHE N H2 sing N N 369 PHE CA C sing N N 370 PHE CA CB sing N N 371 PHE CA HA sing N N 372 PHE C O doub N N 373 PHE C OXT sing N N 374 PHE CB CG sing N N 375 PHE CB HB2 sing N N 376 PHE CB HB3 sing N N 377 PHE CG CD1 doub Y N 378 PHE CG CD2 sing Y N 379 PHE CD1 CE1 sing Y N 380 PHE CD1 HD1 sing N N 381 PHE CD2 CE2 doub Y N 382 PHE CD2 HD2 sing N N 383 PHE CE1 CZ doub Y N 384 PHE CE1 HE1 sing N N 385 PHE CE2 CZ sing Y N 386 PHE CE2 HE2 sing N N 387 PHE CZ HZ sing N N 388 PHE OXT HXT sing N N 389 PRO N CA sing N N 390 PRO N CD sing N N 391 PRO N H sing N N 392 PRO CA C sing N N 393 PRO CA CB sing N N 394 PRO CA HA sing N N 395 PRO C O doub N N 396 PRO C OXT sing N N 397 PRO CB CG sing N N 398 PRO CB HB2 sing N N 399 PRO CB HB3 sing N N 400 PRO CG CD sing N N 401 PRO CG HG2 sing N N 402 PRO CG HG3 sing N N 403 PRO CD HD2 sing N N 404 PRO CD HD3 sing N N 405 PRO OXT HXT sing N N 406 SER N CA sing N N 407 SER N H sing N N 408 SER N H2 sing N N 409 SER CA C sing N N 410 SER CA CB sing N N 411 SER CA HA sing N N 412 SER C O doub N N 413 SER C OXT sing N N 414 SER CB OG sing N N 415 SER CB HB2 sing N N 416 SER CB HB3 sing N N 417 SER OG HG sing N N 418 SER OXT HXT sing N N 419 THR N CA sing N N 420 THR N H sing N N 421 THR N H2 sing N N 422 THR CA C sing N N 423 THR CA CB sing N N 424 THR CA HA sing N N 425 THR C O doub N N 426 THR C OXT sing N N 427 THR CB OG1 sing N N 428 THR CB CG2 sing N N 429 THR CB HB sing N N 430 THR OG1 HG1 sing N N 431 THR CG2 HG21 sing N N 432 THR CG2 HG22 sing N N 433 THR CG2 HG23 sing N N 434 THR OXT HXT sing N N 435 TRP N CA sing N N 436 TRP N H sing N N 437 TRP N H2 sing N N 438 TRP CA C sing N N 439 TRP CA CB sing N N 440 TRP CA HA sing N N 441 TRP C O doub N N 442 TRP C OXT sing N N 443 TRP CB CG sing N N 444 TRP CB HB2 sing N N 445 TRP CB HB3 sing N N 446 TRP CG CD1 doub Y N 447 TRP CG CD2 sing Y N 448 TRP CD1 NE1 sing Y N 449 TRP CD1 HD1 sing N N 450 TRP CD2 CE2 doub Y N 451 TRP CD2 CE3 sing Y N 452 TRP NE1 CE2 sing Y N 453 TRP NE1 HE1 sing N N 454 TRP CE2 CZ2 sing Y N 455 TRP CE3 CZ3 doub Y N 456 TRP CE3 HE3 sing N N 457 TRP CZ2 CH2 doub Y N 458 TRP CZ2 HZ2 sing N N 459 TRP CZ3 CH2 sing Y N 460 TRP CZ3 HZ3 sing N N 461 TRP CH2 HH2 sing N N 462 TRP OXT HXT sing N N 463 TYR N CA sing N N 464 TYR N H sing N N 465 TYR N H2 sing N N 466 TYR CA C sing N N 467 TYR CA CB sing N N 468 TYR CA HA sing N N 469 TYR C O doub N N 470 TYR C OXT sing N N 471 TYR CB CG sing N N 472 TYR CB HB2 sing N N 473 TYR CB HB3 sing N N 474 TYR CG CD1 doub Y N 475 TYR CG CD2 sing Y N 476 TYR CD1 CE1 sing Y N 477 TYR CD1 HD1 sing N N 478 TYR CD2 CE2 doub Y N 479 TYR CD2 HD2 sing N N 480 TYR CE1 CZ doub Y N 481 TYR CE1 HE1 sing N N 482 TYR CE2 CZ sing Y N 483 TYR CE2 HE2 sing N N 484 TYR CZ OH sing N N 485 TYR OH HH sing N N 486 TYR OXT HXT sing N N 487 VAL N CA sing N N 488 VAL N H sing N N 489 VAL N H2 sing N N 490 VAL CA C sing N N 491 VAL CA CB sing N N 492 VAL CA HA sing N N 493 VAL C O doub N N 494 VAL C OXT sing N N 495 VAL CB CG1 sing N N 496 VAL CB CG2 sing N N 497 VAL CB HB sing N N 498 VAL CG1 HG11 sing N N 499 VAL CG1 HG12 sing N N 500 VAL CG1 HG13 sing N N 501 VAL CG2 HG21 sing N N 502 VAL CG2 HG22 sing N N 503 VAL CG2 HG23 sing N N 504 VAL OXT HXT sing N N 505 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1FJL 'double helix' 1FJL 'b-form double helix' 1FJL 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DA 1 1_555 F DT 1 1_555 0.908 0.668 0.075 -19.660 -6.250 51.614 1 D_DA1:DT1_F D 1 ? F 1 ? ? 1 1 D DA 2 1_555 E DT 14 1_555 -0.026 -0.380 0.039 2.082 -4.184 -1.457 2 D_DA2:DT14_E D 2 ? E 14 ? 20 1 1 D DT 3 1_555 E DA 13 1_555 0.313 -0.367 0.136 1.384 -0.837 -1.444 3 D_DT3:DA13_E D 3 ? E 13 ? 20 1 1 D DA 4 1_555 E DT 12 1_555 -0.063 0.014 -0.091 3.865 -18.573 4.629 4 D_DA4:DT12_E D 4 ? E 12 ? 20 1 1 D DA 5 1_555 E DT 11 1_555 0.127 -0.113 0.335 3.716 -17.652 6.084 5 D_DA5:DT11_E D 5 ? E 11 ? 20 1 1 D DT 6 1_555 E DA 10 1_555 -0.328 -0.019 -0.079 2.751 -18.016 2.059 6 D_DT6:DA10_E D 6 ? E 10 ? 20 1 1 D DC 7 1_555 E DG 9 1_555 0.242 -0.176 0.168 -5.176 -17.545 1.489 7 D_DC7:DG9_E D 7 ? E 9 ? 19 1 1 D DT 8 1_555 E DA 8 1_555 -0.428 0.044 -0.254 -2.238 -10.533 -2.164 8 D_DT8:DA8_E D 8 ? E 8 ? 20 1 1 D DG 9 1_555 E DC 7 1_555 0.041 -0.295 0.305 -2.355 -20.419 0.765 9 D_DG9:DC7_E D 9 ? E 7 ? 19 1 1 D DA 10 1_555 E DT 6 1_555 -0.105 -0.300 -0.118 1.436 -16.744 -1.666 10 D_DA10:DT6_E D 10 ? E 6 ? 20 1 1 D DT 11 1_555 E DA 5 1_555 0.247 -0.019 0.389 -4.271 -16.421 10.208 11 D_DT11:DA5_E D 11 ? E 5 ? 20 1 1 D DT 12 1_555 E DA 4 1_555 0.095 -0.386 -0.035 -1.649 -18.447 1.978 12 D_DT12:DA4_E D 12 ? E 4 ? 20 1 1 D DA 13 1_555 E DT 3 1_555 -0.381 -0.155 -0.107 -6.194 -5.177 5.357 13 D_DA13:DT3_E D 13 ? E 3 ? 20 1 1 D DC 14 1_555 E DG 2 1_555 0.599 -0.458 -0.003 -6.648 -10.382 -4.866 14 D_DC14:DG2_E D 14 ? E 2 ? 19 1 1 F DG 2 1_555 F DC 14 4_565 -0.276 -0.069 -0.208 2.090 -2.220 4.897 15 F_DG2:DC14_F F 2 ? F 14 ? 19 1 1 F DT 3 1_555 F DA 13 4_565 0.196 -0.145 -0.133 7.258 -7.045 8.364 16 F_DT3:DA13_F F 3 ? F 13 ? 20 1 1 F DA 4 1_555 F DT 12 4_565 -0.252 -0.200 -0.744 -5.298 -15.713 1.043 17 F_DA4:DT12_F F 4 ? F 12 ? 20 1 1 F DA 5 1_555 F DT 11 4_565 0.333 -0.084 0.361 5.648 -8.816 3.942 18 F_DA5:DT11_F F 5 ? F 11 ? 20 1 1 F DT 6 1_555 F DA 10 4_565 0.111 -0.162 0.329 0.959 -9.572 -5.382 19 F_DT6:DA10_F F 6 ? F 10 ? 20 1 1 F DC 7 1_555 F DG 9 4_565 0.027 -0.446 0.259 -5.624 -11.326 -1.036 20 F_DC7:DG9_F F 7 ? F 9 ? 19 1 1 F DG 9 1_555 F DC 7 4_565 -0.027 -0.446 0.259 5.625 -11.326 -1.036 21 F_DG9:DC7_F F 9 ? F 7 ? 19 1 1 F DA 10 1_555 F DT 6 4_565 -0.111 -0.162 0.329 -0.959 -9.572 -5.382 22 F_DA10:DT6_F F 10 ? F 6 ? 20 1 1 F DT 11 1_555 F DA 5 4_565 -0.333 -0.084 0.361 -5.648 -8.816 3.942 23 F_DT11:DA5_F F 11 ? F 5 ? 20 1 1 F DT 12 1_555 F DA 4 4_565 0.252 -0.200 -0.744 5.298 -15.713 1.043 24 F_DT12:DA4_F F 12 ? F 4 ? 20 1 1 F DA 13 1_555 F DT 3 4_565 -0.196 -0.145 -0.133 -7.258 -7.045 8.364 25 F_DA13:DT3_F F 13 ? F 3 ? 20 1 1 F DC 14 1_555 F DG 2 4_565 0.276 -0.069 -0.208 -2.090 -2.220 4.897 26 F_DC14:DG2_F F 14 ? F 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DA 1 1_555 F DT 1 1_555 D DA 2 1_555 E DT 14 1_555 -2.688 0.591 2.856 -2.087 -1.680 38.790 1.069 3.812 2.964 -2.525 3.138 38.879 1 DD_DA1DA2:DT14DT1_EF D 1 ? F 1 ? D 2 ? E 14 ? 1 D DA 2 1_555 E DT 14 1_555 D DT 3 1_555 E DA 13 1_555 0.902 0.399 3.422 0.522 3.586 36.542 0.117 -1.356 3.456 5.701 -0.829 36.716 2 DD_DA2DT3:DA13DT14_EE D 2 ? E 14 ? D 3 ? E 13 ? 1 D DT 3 1_555 E DA 13 1_555 D DA 4 1_555 E DT 12 1_555 -1.314 0.707 3.281 0.089 -1.758 35.551 1.412 2.162 3.240 -2.877 -0.146 35.593 3 DD_DT3DA4:DT12DA13_EE D 3 ? E 13 ? D 4 ? E 12 ? 1 D DA 4 1_555 E DT 12 1_555 D DA 5 1_555 E DT 11 1_555 0.403 -0.398 3.123 -3.377 4.020 38.935 -1.043 -0.979 3.025 5.997 5.039 39.274 4 DD_DA4DA5:DT11DT12_EE D 4 ? E 12 ? D 5 ? E 11 ? 1 D DA 5 1_555 E DT 11 1_555 D DT 6 1_555 E DA 10 1_555 -0.538 -0.936 3.242 2.024 2.184 27.899 -2.432 1.575 3.115 4.514 -4.183 28.055 5 DD_DA5DT6:DA10DT11_EE D 5 ? E 11 ? D 6 ? E 10 ? 1 D DT 6 1_555 E DA 10 1_555 D DC 7 1_555 E DG 9 1_555 -0.175 -0.321 3.506 -2.396 3.655 35.191 -1.101 -0.089 3.461 6.017 3.945 35.452 6 DD_DT6DC7:DG9DA10_EE D 6 ? E 10 ? D 7 ? E 9 ? 1 D DC 7 1_555 E DG 9 1_555 D DT 8 1_555 E DA 8 1_555 -0.380 -0.295 3.326 5.282 5.418 28.583 -1.727 1.866 3.100 10.737 -10.468 29.547 7 DD_DC7DT8:DA8DG9_EE D 7 ? E 9 ? D 8 ? E 8 ? 1 D DT 8 1_555 E DA 8 1_555 D DG 9 1_555 E DC 7 1_555 0.464 0.370 3.177 -6.575 12.091 37.219 -0.843 -1.440 3.028 18.199 9.897 39.597 8 DD_DT8DG9:DC7DA8_EE D 8 ? E 8 ? D 9 ? E 7 ? 1 D DG 9 1_555 E DC 7 1_555 D DA 10 1_555 E DT 6 1_555 0.010 -0.319 3.133 2.024 -0.547 31.412 -0.490 0.344 3.132 -1.009 -3.733 31.480 9 DD_DG9DA10:DT6DC7_EE D 9 ? E 7 ? D 10 ? E 6 ? 1 D DA 10 1_555 E DT 6 1_555 D DT 11 1_555 E DA 5 1_555 0.754 -1.009 3.352 -1.396 4.952 32.586 -2.617 -1.565 3.135 8.757 2.469 32.978 10 DD_DA10DT11:DA5DT6_EE D 10 ? E 6 ? D 11 ? E 5 ? 1 D DT 11 1_555 E DA 5 1_555 D DT 12 1_555 E DA 4 1_555 -0.498 -0.323 3.081 1.750 -2.477 36.791 -0.195 1.010 3.070 -3.916 -2.767 36.912 11 DD_DT11DT12:DA4DA5_EE D 11 ? E 5 ? D 12 ? E 4 ? 1 D DT 12 1_555 E DA 4 1_555 D DA 13 1_555 E DT 3 1_555 0.920 0.674 3.524 3.991 3.260 35.905 0.581 -0.862 3.647 5.254 -6.433 36.261 12 DD_DT12DA13:DT3DA4_EE D 12 ? E 4 ? D 13 ? E 3 ? 1 D DA 13 1_555 E DT 3 1_555 D DC 14 1_555 E DG 2 1_555 -0.662 0.018 3.228 -2.406 4.031 33.563 -0.613 0.750 3.246 6.938 4.142 33.880 13 DD_DA13DC14:DG2DT3_EE D 13 ? E 3 ? D 14 ? E 2 ? 1 F DG 2 1_555 F DC 14 4_565 F DT 3 1_555 F DA 13 4_565 0.651 0.160 3.188 -0.177 2.161 34.258 -0.060 -1.131 3.189 3.665 0.299 34.325 14 FF_DG2DT3:DA13DC14_FF F 2 ? F 14 ? F 3 ? F 13 ? 1 F DT 3 1_555 F DA 13 4_565 F DA 4 1_555 F DT 12 4_565 -1.518 0.849 3.686 1.241 0.300 36.986 1.292 2.579 3.642 0.473 -1.955 37.008 15 FF_DT3DA4:DT12DA13_FF F 3 ? F 13 ? F 4 ? F 12 ? 1 F DA 4 1_555 F DT 12 4_565 F DA 5 1_555 F DT 11 4_565 0.469 -0.079 2.834 -7.472 1.496 41.747 -0.239 -1.298 2.710 2.079 10.381 42.406 16 FF_DA4DA5:DT11DT12_FF F 4 ? F 12 ? F 5 ? F 11 ? 1 F DA 5 1_555 F DT 11 4_565 F DT 6 1_555 F DA 10 4_565 -0.380 -1.188 3.387 0.130 -0.169 28.025 -2.411 0.817 3.392 -0.348 -0.268 28.026 17 FF_DA5DT6:DA10DT11_FF F 5 ? F 11 ? F 6 ? F 10 ? 1 F DT 6 1_555 F DA 10 4_565 F DC 7 1_555 F DG 9 4_565 0.164 -0.499 3.345 1.354 4.973 33.821 -1.644 -0.062 3.245 8.487 -2.310 34.201 18 FF_DT6DC7:DG9DA10_FF F 6 ? F 10 ? F 7 ? F 9 ? 1 F DC 7 1_555 F DG 9 4_565 F DG 9 1_555 F DC 7 4_565 0.000 -0.524 6.131 0.000 11.900 65.018 -1.379 0.000 5.967 10.975 0.000 65.980 19 FF_DC7DG9:DC7DG9_FF F 7 ? F 9 ? F 9 ? F 7 ? 1 F DG 9 1_555 F DC 7 4_565 F DA 10 1_555 F DT 6 4_565 -0.164 -0.499 3.345 -1.354 4.973 33.821 -1.644 0.062 3.245 8.487 2.310 34.201 20 FF_DG9DA10:DT6DC7_FF F 9 ? F 7 ? F 10 ? F 6 ? 1 F DA 10 1_555 F DT 6 4_565 F DT 11 1_555 F DA 5 4_565 0.380 -1.188 3.387 -0.130 -0.169 28.025 -2.411 -0.817 3.392 -0.348 0.268 28.026 21 FF_DA10DT11:DA5DT6_FF F 10 ? F 6 ? F 11 ? F 5 ? 1 F DT 11 1_555 F DA 5 4_565 F DT 12 1_555 F DA 4 4_565 -0.469 -0.079 2.834 7.472 1.496 41.747 -0.239 1.298 2.710 2.079 -10.381 42.406 22 FF_DT11DT12:DA4DA5_FF F 11 ? F 5 ? F 12 ? F 4 ? 1 F DT 12 1_555 F DA 4 4_565 F DA 13 1_555 F DT 3 4_565 1.518 0.849 3.686 -1.241 0.300 36.986 1.292 -2.579 3.642 0.473 1.955 37.008 23 FF_DT12DA13:DT3DA4_FF F 12 ? F 4 ? F 13 ? F 3 ? 1 F DA 13 1_555 F DT 3 4_565 F DC 14 1_555 F DG 2 4_565 -0.651 0.160 3.188 0.177 2.162 34.258 -0.060 1.131 3.189 3.665 -0.299 34.325 24 FF_DA13DC14:DG2DT3_FF F 13 ? F 3 ? F 14 ? F 2 ? # _atom_sites.entry_id 1FJL _atom_sites.fract_transf_matrix[1][1] 0.013848 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006808 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012948 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_