HEADER DE NOVO PROTEIN 16-AUG-00 1FME TITLE SOLUTION STRUCTURE OF FSD-EY, A NOVEL PEPTIDE ASSUMING A BETA-BETA- TITLE 2 ALPHA FOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: FSD-EY PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: POINT MUTANT OF SEQUENCE GENERATED BY ORBIT DESIGN SOURCE 4 PROCESS KEYWDS BETA-BETA-ALPHA, ZINC FINGER, FSD-1, DESIGNED PROTEIN, DE NOVO KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 34 AUTHOR C.A.SARISKY,S.L.MAYO REVDAT 4 22-MAY-24 1FME 1 REMARK REVDAT 3 23-FEB-22 1FME 1 REMARK REVDAT 2 24-FEB-09 1FME 1 VERSN REVDAT 1 21-APR-01 1FME 0 JRNL AUTH C.A.SARISKY,S.L.MAYO JRNL TITL THE BETA-BETA-ALPHA FOLD: EXPLORATIONS IN SEQUENCE SPACE. JRNL REF J.MOL.BIOL. V. 307 1411 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11292351 JRNL DOI 10.1006/JMBI.2000.4345 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ANSIG, X-PLOR 3.857 REMARK 3 AUTHORS : PER KRAULIS (ANSIG), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FME COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-00. REMARK 100 THE DEPOSITION ID IS D_1000011711. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 280 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM PEPTIDE; 2 MM PEPTIDE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; DQF-COSY; TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1 REMARK 210 METHOD USED : X-PLOR: DISTANCE GEOMETRY, REMARK 210 REFINEMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 49 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 34 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 7 -68.79 -126.50 REMARK 500 1 LYS A 8 59.16 -118.77 REMARK 500 1 PHE A 21 -74.37 -68.42 REMARK 500 2 TYR A 3 153.35 -48.62 REMARK 500 2 THR A 4 31.46 -98.45 REMARK 500 2 TYR A 7 -68.65 -124.11 REMARK 500 2 LYS A 8 60.97 -115.62 REMARK 500 2 PHE A 21 -73.17 -64.51 REMARK 500 3 TYR A 3 154.82 -49.72 REMARK 500 3 TYR A 7 -64.92 -124.37 REMARK 500 3 PHE A 21 -73.89 -63.47 REMARK 500 4 TYR A 7 -77.44 -126.49 REMARK 500 4 LYS A 8 53.61 -109.76 REMARK 500 5 ASN A 14 121.44 -170.73 REMARK 500 5 PHE A 21 -74.56 -68.78 REMARK 500 6 PHE A 21 -75.78 -71.17 REMARK 500 8 TYR A 3 171.06 -50.29 REMARK 500 8 ASN A 14 130.87 -175.09 REMARK 500 8 GLU A 17 -70.07 -61.47 REMARK 500 9 THR A 4 54.14 -107.27 REMARK 500 9 ALA A 5 -162.36 -58.54 REMARK 500 9 LYS A 6 150.70 176.87 REMARK 500 9 TYR A 7 -44.05 -142.30 REMARK 500 9 PHE A 21 -73.79 -69.30 REMARK 500 10 GLN A 2 -164.24 -104.78 REMARK 500 10 TYR A 3 162.25 -47.30 REMARK 500 10 PHE A 21 -73.65 -64.74 REMARK 500 11 GLN A 2 -168.74 -108.92 REMARK 500 11 TYR A 3 162.88 -47.49 REMARK 500 11 PHE A 21 -74.66 -63.63 REMARK 500 12 THR A 4 42.82 -109.43 REMARK 500 12 PHE A 21 -73.10 -65.62 REMARK 500 13 TYR A 7 -63.24 -139.55 REMARK 500 14 TYR A 3 179.12 -54.52 REMARK 500 14 TYR A 7 -77.50 -125.41 REMARK 500 14 LYS A 8 54.48 -118.15 REMARK 500 14 PHE A 25 -96.24 -59.33 REMARK 500 14 LYS A 26 -70.10 -151.86 REMARK 500 15 TYR A 3 176.71 -51.74 REMARK 500 15 TYR A 7 -75.71 -125.79 REMARK 500 15 LYS A 8 55.95 -118.54 REMARK 500 15 PHE A 25 -95.04 -55.15 REMARK 500 15 LYS A 26 -62.25 -151.45 REMARK 500 16 TYR A 7 -54.50 -124.39 REMARK 500 16 PHE A 25 -93.56 -50.13 REMARK 500 16 LYS A 26 -65.71 -147.39 REMARK 500 17 TYR A 3 165.34 -49.53 REMARK 500 17 PHE A 21 -73.90 -69.56 REMARK 500 18 TYR A 3 -170.39 -69.44 REMARK 500 18 THR A 4 -71.39 -108.25 REMARK 500 REMARK 500 THIS ENTRY HAS 126 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 10 0.29 SIDE CHAIN REMARK 500 1 ARG A 13 0.32 SIDE CHAIN REMARK 500 1 ARG A 19 0.21 SIDE CHAIN REMARK 500 1 ARG A 28 0.32 SIDE CHAIN REMARK 500 2 ARG A 10 0.26 SIDE CHAIN REMARK 500 2 ARG A 13 0.25 SIDE CHAIN REMARK 500 2 ARG A 19 0.29 SIDE CHAIN REMARK 500 2 ARG A 28 0.21 SIDE CHAIN REMARK 500 3 ARG A 10 0.28 SIDE CHAIN REMARK 500 3 ARG A 13 0.30 SIDE CHAIN REMARK 500 3 ARG A 19 0.29 SIDE CHAIN REMARK 500 3 ARG A 28 0.21 SIDE CHAIN REMARK 500 4 ARG A 10 0.22 SIDE CHAIN REMARK 500 4 ARG A 13 0.24 SIDE CHAIN REMARK 500 4 ARG A 19 0.20 SIDE CHAIN REMARK 500 4 ARG A 28 0.29 SIDE CHAIN REMARK 500 5 ARG A 10 0.31 SIDE CHAIN REMARK 500 5 ARG A 13 0.23 SIDE CHAIN REMARK 500 5 ARG A 19 0.31 SIDE CHAIN REMARK 500 5 ARG A 28 0.31 SIDE CHAIN REMARK 500 6 ARG A 10 0.28 SIDE CHAIN REMARK 500 6 ARG A 13 0.21 SIDE CHAIN REMARK 500 6 ARG A 19 0.23 SIDE CHAIN REMARK 500 6 ARG A 28 0.23 SIDE CHAIN REMARK 500 7 ARG A 10 0.28 SIDE CHAIN REMARK 500 7 ARG A 13 0.26 SIDE CHAIN REMARK 500 7 ARG A 19 0.28 SIDE CHAIN REMARK 500 7 ARG A 28 0.32 SIDE CHAIN REMARK 500 8 ARG A 10 0.22 SIDE CHAIN REMARK 500 8 ARG A 13 0.30 SIDE CHAIN REMARK 500 8 ARG A 19 0.29 SIDE CHAIN REMARK 500 8 ARG A 28 0.28 SIDE CHAIN REMARK 500 9 ARG A 10 0.21 SIDE CHAIN REMARK 500 9 ARG A 13 0.29 SIDE CHAIN REMARK 500 9 ARG A 19 0.32 SIDE CHAIN REMARK 500 9 ARG A 28 0.28 SIDE CHAIN REMARK 500 10 ARG A 10 0.29 SIDE CHAIN REMARK 500 10 ARG A 13 0.31 SIDE CHAIN REMARK 500 10 ARG A 19 0.23 SIDE CHAIN REMARK 500 10 ARG A 28 0.31 SIDE CHAIN REMARK 500 11 ARG A 10 0.32 SIDE CHAIN REMARK 500 11 ARG A 13 0.27 SIDE CHAIN REMARK 500 11 ARG A 19 0.21 SIDE CHAIN REMARK 500 11 ARG A 28 0.32 SIDE CHAIN REMARK 500 12 ARG A 10 0.30 SIDE CHAIN REMARK 500 12 ARG A 13 0.32 SIDE CHAIN REMARK 500 12 ARG A 19 0.30 SIDE CHAIN REMARK 500 12 ARG A 28 0.32 SIDE CHAIN REMARK 500 13 ARG A 10 0.21 SIDE CHAIN REMARK 500 13 ARG A 13 0.27 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 136 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1FME A 1 28 PDB 1FME 1FME 1 28 SEQRES 1 A 28 GLU GLN TYR THR ALA LYS TYR LYS GLY ARG THR PHE ARG SEQRES 2 A 28 ASN GLU LYS GLU LEU ARG ASP PHE ILE GLU LYS PHE LYS SEQRES 3 A 28 GLY ARG HELIX 1 1 ASN A 14 PHE A 25 1 12 SHEET 1 A 2 ALA A 5 LYS A 6 0 SHEET 2 A 2 THR A 11 PHE A 12 -1 N PHE A 12 O ALA A 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1