data_1FP5 # _entry.id 1FP5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FP5 RCSB RCSB011788 WWPDB D_1000011788 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1F6A _pdbx_database_related.details '1F6A contains the same Fc protein in complex with its high affinity receptor, the Fc epsilon RI alpha (soluble ectodomain).' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FP5 _pdbx_database_status.recvd_initial_deposition_date 2000-08-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wurzburg, B.A.' 1 'Garman, S.C.' 2 'Jardetzky, T.S.' 3 # _citation.id primary _citation.title 'Structure of the human IgE-Fc C epsilon 3-C epsilon 4 reveals conformational flexibility in the antibody effector domains.' _citation.journal_abbrev Immunity _citation.journal_volume 13 _citation.page_first 375 _citation.page_last 385 _citation.year 2000 _citation.journal_id_ASTM IUNIEH _citation.country US _citation.journal_id_ISSN 1074-7613 _citation.journal_id_CSD 2048 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11021535 _citation.pdbx_database_id_DOI '10.1016/S1074-7613(00)00037-6' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wurzburg, B.A.' 1 primary 'Garman, S.C.' 2 primary 'Jardetzky, T.S.' 3 # _cell.entry_id 1FP5 _cell.length_a 105.600 _cell.length_b 105.600 _cell.length_c 47.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FP5 _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'IGE HEAVY CHAIN EPSILON-1' 24821.018 1 ? ? CEPSILON3-CEPSILON4 ? 2 water nat water 18.015 145 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name IGE-FC # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADPCDSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPV GTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQL PDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPGK ; _entity_poly.pdbx_seq_one_letter_code_can ;ADPCDSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPV GTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQL PDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 PRO n 1 4 CYS n 1 5 ASP n 1 6 SER n 1 7 ASN n 1 8 PRO n 1 9 ARG n 1 10 GLY n 1 11 VAL n 1 12 SER n 1 13 ALA n 1 14 TYR n 1 15 LEU n 1 16 SER n 1 17 ARG n 1 18 PRO n 1 19 SER n 1 20 PRO n 1 21 PHE n 1 22 ASP n 1 23 LEU n 1 24 PHE n 1 25 ILE n 1 26 ARG n 1 27 LYS n 1 28 SER n 1 29 PRO n 1 30 THR n 1 31 ILE n 1 32 THR n 1 33 CYS n 1 34 LEU n 1 35 VAL n 1 36 VAL n 1 37 ASP n 1 38 LEU n 1 39 ALA n 1 40 PRO n 1 41 SER n 1 42 LYS n 1 43 GLY n 1 44 THR n 1 45 VAL n 1 46 ASN n 1 47 LEU n 1 48 THR n 1 49 TRP n 1 50 SER n 1 51 ARG n 1 52 ALA n 1 53 SER n 1 54 GLY n 1 55 LYS n 1 56 PRO n 1 57 VAL n 1 58 ASN n 1 59 HIS n 1 60 SER n 1 61 THR n 1 62 ARG n 1 63 LYS n 1 64 GLU n 1 65 GLU n 1 66 LYS n 1 67 GLN n 1 68 ARG n 1 69 ASN n 1 70 GLY n 1 71 THR n 1 72 LEU n 1 73 THR n 1 74 VAL n 1 75 THR n 1 76 SER n 1 77 THR n 1 78 LEU n 1 79 PRO n 1 80 VAL n 1 81 GLY n 1 82 THR n 1 83 ARG n 1 84 ASP n 1 85 TRP n 1 86 ILE n 1 87 GLU n 1 88 GLY n 1 89 GLU n 1 90 THR n 1 91 TYR n 1 92 GLN n 1 93 CYS n 1 94 ARG n 1 95 VAL n 1 96 THR n 1 97 HIS n 1 98 PRO n 1 99 HIS n 1 100 LEU n 1 101 PRO n 1 102 ARG n 1 103 ALA n 1 104 LEU n 1 105 MET n 1 106 ARG n 1 107 SER n 1 108 THR n 1 109 THR n 1 110 LYS n 1 111 THR n 1 112 SER n 1 113 GLY n 1 114 PRO n 1 115 ARG n 1 116 ALA n 1 117 ALA n 1 118 PRO n 1 119 GLU n 1 120 VAL n 1 121 TYR n 1 122 ALA n 1 123 PHE n 1 124 ALA n 1 125 THR n 1 126 PRO n 1 127 GLU n 1 128 TRP n 1 129 PRO n 1 130 GLY n 1 131 SER n 1 132 ARG n 1 133 ASP n 1 134 LYS n 1 135 ARG n 1 136 THR n 1 137 LEU n 1 138 ALA n 1 139 CYS n 1 140 LEU n 1 141 ILE n 1 142 GLN n 1 143 ASN n 1 144 PHE n 1 145 MET n 1 146 PRO n 1 147 GLU n 1 148 ASP n 1 149 ILE n 1 150 SER n 1 151 VAL n 1 152 GLN n 1 153 TRP n 1 154 LEU n 1 155 HIS n 1 156 ASN n 1 157 GLU n 1 158 VAL n 1 159 GLN n 1 160 LEU n 1 161 PRO n 1 162 ASP n 1 163 ALA n 1 164 ARG n 1 165 HIS n 1 166 SER n 1 167 THR n 1 168 THR n 1 169 GLN n 1 170 PRO n 1 171 ARG n 1 172 LYS n 1 173 THR n 1 174 LYS n 1 175 GLY n 1 176 SER n 1 177 GLY n 1 178 PHE n 1 179 PHE n 1 180 VAL n 1 181 PHE n 1 182 SER n 1 183 ARG n 1 184 LEU n 1 185 GLU n 1 186 VAL n 1 187 THR n 1 188 ARG n 1 189 ALA n 1 190 GLU n 1 191 TRP n 1 192 GLU n 1 193 GLN n 1 194 LYS n 1 195 ASP n 1 196 GLU n 1 197 PHE n 1 198 ILE n 1 199 CYS n 1 200 ARG n 1 201 ALA n 1 202 VAL n 1 203 HIS n 1 204 GLU n 1 205 ALA n 1 206 ALA n 1 207 SER n 1 208 PRO n 1 209 SER n 1 210 GLN n 1 211 THR n 1 212 VAL n 1 213 GLN n 1 214 ARG n 1 215 ALA n 1 216 VAL n 1 217 SER n 1 218 VAL n 1 219 ASN n 1 220 PRO n 1 221 GLY n 1 222 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'cabbage looper' _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus Trichoplusia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PACGP67A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code IGHE_HUMAN _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P01854 _struct_ref.pdbx_align_begin 357 _struct_ref.pdbx_seq_one_letter_code ;DSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRD WIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPGK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FP5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 222 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01854 _struct_ref_seq.db_align_beg 357 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 574 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 330 _struct_ref_seq.pdbx_auth_seq_align_end 547 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1FP5 ALA A 1 ? UNP P01854 ? ? 'CLONING ARTIFACT' 326 1 1 1FP5 ASP A 2 ? UNP P01854 ? ? 'CLONING ARTIFACT' 327 2 1 1FP5 PRO A 3 ? UNP P01854 ? ? 'CLONING ARTIFACT' 328 3 1 1FP5 CYS A 4 ? UNP P01854 ? ? 'CLONING ARTIFACT' 329 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FP5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.5 _exptl_crystal.density_Matthews 2.64 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium acetate pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-08-07 _diffrn_detector.details '1mm x 1mm slits, 25 m from crystal' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator 'Si (111), cryogenically-cooled' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.906 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 5ID-B' _diffrn_source.pdbx_wavelength 0.906 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 5ID-B _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FP5 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 12322 _reflns.number_all 12322 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.9 _reflns.B_iso_Wilson_estimate 49.2 _reflns.pdbx_redundancy 8.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.257 _reflns_shell.meanI_over_sigI_obs 10.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.number_unique_all 1208 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1FP5 _refine.ls_number_reflns_obs 12322 _refine.ls_number_reflns_all 12322 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.242 _refine.ls_R_factor_R_free 0.27 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.3 _refine.ls_number_reflns_R_free 1269 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 51.9 _refine.aniso_B[1][1] 2.735 _refine.aniso_B[2][2] 2.735 _refine.aniso_B[3][3] -5.470 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;Density for the Cepsilon4 AB loop was particularly poor, especially from residues 453-457, and this region of the loop was built sterically. The B-factors were generally higher and the electron density generally poorer for the BC- DE- and FG-loops of the Cepsilon3 domain that bind to the high affinity receptor. The residue K435 sits at the interdomain interface and the side chain may partially fill a gap in the space between the domains. This is not obvious from the structure, however, as all of the atoms could not be modeled for this residue. The structure contains two cis-Prolines : P471 and P533 There are N-linked carbohydrates attached to the protein at residues N371 and N394. Some electron density is observed for the carbohydrate attached to N394, but no electron density is observed for the carbohydrate attached to N371. Carbohydrates were not modeled in the structure and so they are not present in the PDB file. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1618 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1763 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.77 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.951 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.21 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 3.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.5 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1FP5 _struct.title 'CRYSTAL STRUCTURE ANALYSIS OF THE HUMAN IGE-FC CEPSILON3-CEPSILON4 FRAGMENT.' _struct.pdbx_descriptor 'IG HEAVY CHAIN EPSILON-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FP5 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;Antibody, Fc, Immunoglobin fold, "closed" IgE-Fc, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'The asymmetric unit contains one chain of the Fc homodimer. The biological dimer can be generated from chain A.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 19 ? ILE A 25 ? SER A 344 ILE A 350 1 ? 7 HELX_P HELX_P2 2 GLY A 81 ? GLU A 87 ? GLY A 406 GLU A 412 1 ? 7 HELX_P HELX_P3 3 PRO A 161 ? ALA A 163 ? PRO A 486 ALA A 488 5 ? 3 HELX_P HELX_P4 4 THR A 187 ? GLU A 192 ? THR A 512 GLU A 517 1 ? 6 HELX_P HELX_P5 5 GLN A 193 ? ASP A 195 ? GLN A 518 ASP A 520 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 33 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 358 A CYS 418 1_555 ? ? ? ? ? ? ? 2.046 ? disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 199 SG ? ? A CYS 464 A CYS 524 1_555 ? ? ? ? ? ? ? 2.059 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 145 A . ? MET 470 A PRO 146 A ? PRO 471 A 1 -0.10 2 SER 207 A . ? SER 532 A PRO 208 A ? PRO 533 A 1 1.12 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? D ? 4 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 12 ? SER A 16 ? SER A 337 SER A 341 A 2 THR A 30 ? ASP A 37 ? THR A 355 ASP A 362 A 3 THR A 71 ? PRO A 79 ? THR A 396 PRO A 404 A 4 THR A 61 ? GLN A 67 ? THR A 386 GLN A 392 B 1 ASN A 46 ? ARG A 51 ? ASN A 371 ARG A 376 B 2 TYR A 91 ? THR A 96 ? TYR A 416 THR A 421 B 3 LEU A 104 ? THR A 108 ? LEU A 429 THR A 433 C 1 GLU A 119 ? ALA A 124 ? GLU A 444 ALA A 449 C 2 ARG A 135 ? PHE A 144 ? ARG A 460 PHE A 469 C 3 PHE A 178 ? VAL A 186 ? PHE A 503 VAL A 511 C 4 HIS A 165 ? THR A 167 ? HIS A 490 THR A 492 D 1 GLU A 119 ? ALA A 124 ? GLU A 444 ALA A 449 D 2 ARG A 135 ? PHE A 144 ? ARG A 460 PHE A 469 D 3 PHE A 178 ? VAL A 186 ? PHE A 503 VAL A 511 D 4 ARG A 171 ? LYS A 172 ? ARG A 496 LYS A 497 E 1 VAL A 158 ? GLN A 159 ? VAL A 483 GLN A 484 E 2 SER A 150 ? HIS A 155 ? SER A 475 HIS A 480 E 3 PHE A 197 ? VAL A 202 ? PHE A 522 VAL A 527 E 4 THR A 211 ? ALA A 215 ? THR A 536 ALA A 540 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 16 ? N SER A 341 O THR A 32 ? O THR A 357 A 2 3 O ASP A 37 ? O ASP A 362 N LEU A 72 ? N LEU A 397 A 3 4 N THR A 77 ? N THR A 402 O THR A 61 ? O THR A 386 B 1 2 O SER A 50 ? O SER A 375 N GLN A 92 ? N GLN A 417 B 2 3 N VAL A 95 ? N VAL A 420 O LEU A 104 ? O LEU A 429 C 1 2 N PHE A 123 ? N PHE A 448 O ALA A 138 ? O ALA A 463 C 2 3 O PHE A 144 ? O PHE A 469 N PHE A 178 ? N PHE A 503 C 3 4 N ARG A 183 ? N ARG A 508 O SER A 166 ? O SER A 491 D 1 2 N PHE A 123 ? N PHE A 448 O ALA A 138 ? O ALA A 463 D 2 3 O PHE A 144 ? O PHE A 469 N PHE A 178 ? N PHE A 503 D 3 4 O PHE A 179 ? O PHE A 504 N ARG A 171 ? N ARG A 496 E 1 2 O VAL A 158 ? O VAL A 483 N HIS A 155 ? N HIS A 480 E 2 3 O LEU A 154 ? O LEU A 479 N ILE A 198 ? N ILE A 523 E 3 4 N ALA A 201 ? N ALA A 526 O VAL A 212 ? O VAL A 537 # _database_PDB_matrix.entry_id 1FP5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FP5 _atom_sites.fract_transf_matrix[1][1] 0.009470 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009470 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021231 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 326 ? ? ? A . n A 1 2 ASP 2 327 ? ? ? A . n A 1 3 PRO 3 328 ? ? ? A . n A 1 4 CYS 4 329 ? ? ? A . n A 1 5 ASP 5 330 ? ? ? A . n A 1 6 SER 6 331 ? ? ? A . n A 1 7 ASN 7 332 ? ? ? A . n A 1 8 PRO 8 333 ? ? ? A . n A 1 9 ARG 9 334 ? ? ? A . n A 1 10 GLY 10 335 ? ? ? A . n A 1 11 VAL 11 336 336 VAL VAL A . n A 1 12 SER 12 337 337 SER SER A . n A 1 13 ALA 13 338 338 ALA ALA A . n A 1 14 TYR 14 339 339 TYR TYR A . n A 1 15 LEU 15 340 340 LEU LEU A . n A 1 16 SER 16 341 341 SER SER A . n A 1 17 ARG 17 342 342 ARG ARG A . n A 1 18 PRO 18 343 343 PRO PRO A . n A 1 19 SER 19 344 344 SER SER A . n A 1 20 PRO 20 345 345 PRO PRO A . n A 1 21 PHE 21 346 346 PHE PHE A . n A 1 22 ASP 22 347 347 ASP ASP A . n A 1 23 LEU 23 348 348 LEU LEU A . n A 1 24 PHE 24 349 349 PHE PHE A . n A 1 25 ILE 25 350 350 ILE ILE A . n A 1 26 ARG 26 351 351 ARG ARG A . n A 1 27 LYS 27 352 352 LYS LYS A . n A 1 28 SER 28 353 353 SER SER A . n A 1 29 PRO 29 354 354 PRO PRO A . n A 1 30 THR 30 355 355 THR THR A . n A 1 31 ILE 31 356 356 ILE ILE A . n A 1 32 THR 32 357 357 THR THR A . n A 1 33 CYS 33 358 358 CYS CYS A . n A 1 34 LEU 34 359 359 LEU LEU A . n A 1 35 VAL 35 360 360 VAL VAL A . n A 1 36 VAL 36 361 361 VAL VAL A . n A 1 37 ASP 37 362 362 ASP ASP A . n A 1 38 LEU 38 363 363 LEU LEU A . n A 1 39 ALA 39 364 364 ALA ALA A . n A 1 40 PRO 40 365 365 PRO PRO A . n A 1 41 SER 41 366 366 SER SER A . n A 1 42 LYS 42 367 367 LYS LYS A . n A 1 43 GLY 43 368 368 GLY GLY A . n A 1 44 THR 44 369 369 THR THR A . n A 1 45 VAL 45 370 370 VAL VAL A . n A 1 46 ASN 46 371 371 ASN ASN A . n A 1 47 LEU 47 372 372 LEU LEU A . n A 1 48 THR 48 373 373 THR THR A . n A 1 49 TRP 49 374 374 TRP TRP A . n A 1 50 SER 50 375 375 SER SER A . n A 1 51 ARG 51 376 376 ARG ARG A . n A 1 52 ALA 52 377 377 ALA ALA A . n A 1 53 SER 53 378 378 SER SER A . n A 1 54 GLY 54 379 379 GLY GLY A . n A 1 55 LYS 55 380 380 LYS LYS A . n A 1 56 PRO 56 381 381 PRO PRO A . n A 1 57 VAL 57 382 382 VAL VAL A . n A 1 58 ASN 58 383 383 ASN ASN A . n A 1 59 HIS 59 384 384 HIS HIS A . n A 1 60 SER 60 385 385 SER SER A . n A 1 61 THR 61 386 386 THR THR A . n A 1 62 ARG 62 387 387 ARG ARG A . n A 1 63 LYS 63 388 388 LYS LYS A . n A 1 64 GLU 64 389 389 GLU GLU A . n A 1 65 GLU 65 390 390 GLU GLU A . n A 1 66 LYS 66 391 391 LYS ALA A . n A 1 67 GLN 67 392 392 GLN GLN A . n A 1 68 ARG 68 393 393 ARG ARG A . n A 1 69 ASN 69 394 394 ASN ASN A . n A 1 70 GLY 70 395 395 GLY GLY A . n A 1 71 THR 71 396 396 THR THR A . n A 1 72 LEU 72 397 397 LEU LEU A . n A 1 73 THR 73 398 398 THR THR A . n A 1 74 VAL 74 399 399 VAL VAL A . n A 1 75 THR 75 400 400 THR THR A . n A 1 76 SER 76 401 401 SER SER A . n A 1 77 THR 77 402 402 THR THR A . n A 1 78 LEU 78 403 403 LEU LEU A . n A 1 79 PRO 79 404 404 PRO PRO A . n A 1 80 VAL 80 405 405 VAL VAL A . n A 1 81 GLY 81 406 406 GLY GLY A . n A 1 82 THR 82 407 407 THR THR A . n A 1 83 ARG 83 408 408 ARG ALA A . n A 1 84 ASP 84 409 409 ASP ASP A . n A 1 85 TRP 85 410 410 TRP TRP A . n A 1 86 ILE 86 411 411 ILE ILE A . n A 1 87 GLU 87 412 412 GLU GLU A . n A 1 88 GLY 88 413 413 GLY GLY A . n A 1 89 GLU 89 414 414 GLU GLU A . n A 1 90 THR 90 415 415 THR THR A . n A 1 91 TYR 91 416 416 TYR TYR A . n A 1 92 GLN 92 417 417 GLN GLN A . n A 1 93 CYS 93 418 418 CYS CYS A . n A 1 94 ARG 94 419 419 ARG ARG A . n A 1 95 VAL 95 420 420 VAL VAL A . n A 1 96 THR 96 421 421 THR THR A . n A 1 97 HIS 97 422 422 HIS HIS A . n A 1 98 PRO 98 423 423 PRO PRO A . n A 1 99 HIS 99 424 424 HIS HIS A . n A 1 100 LEU 100 425 425 LEU LEU A . n A 1 101 PRO 101 426 426 PRO PRO A . n A 1 102 ARG 102 427 427 ARG ARG A . n A 1 103 ALA 103 428 428 ALA ALA A . n A 1 104 LEU 104 429 429 LEU LEU A . n A 1 105 MET 105 430 430 MET MET A . n A 1 106 ARG 106 431 431 ARG ARG A . n A 1 107 SER 107 432 432 SER SER A . n A 1 108 THR 108 433 433 THR THR A . n A 1 109 THR 109 434 434 THR THR A . n A 1 110 LYS 110 435 435 LYS ALA A . n A 1 111 THR 111 436 436 THR THR A . n A 1 112 SER 112 437 437 SER SER A . n A 1 113 GLY 113 438 438 GLY GLY A . n A 1 114 PRO 114 439 439 PRO PRO A . n A 1 115 ARG 115 440 440 ARG ARG A . n A 1 116 ALA 116 441 441 ALA ALA A . n A 1 117 ALA 117 442 442 ALA ALA A . n A 1 118 PRO 118 443 443 PRO PRO A . n A 1 119 GLU 119 444 444 GLU ALA A . n A 1 120 VAL 120 445 445 VAL VAL A . n A 1 121 TYR 121 446 446 TYR TYR A . n A 1 122 ALA 122 447 447 ALA ALA A . n A 1 123 PHE 123 448 448 PHE PHE A . n A 1 124 ALA 124 449 449 ALA ALA A . n A 1 125 THR 125 450 450 THR THR A . n A 1 126 PRO 126 451 451 PRO PRO A . n A 1 127 GLU 127 452 452 GLU GLU A . n A 1 128 TRP 128 453 453 TRP TRP A . n A 1 129 PRO 129 454 454 PRO PRO A . n A 1 130 GLY 130 455 455 GLY GLY A . n A 1 131 SER 131 456 456 SER SER A . n A 1 132 ARG 132 457 457 ARG ALA A . n A 1 133 ASP 133 458 458 ASP ASP A . n A 1 134 LYS 134 459 459 LYS LYS A . n A 1 135 ARG 135 460 460 ARG ARG A . n A 1 136 THR 136 461 461 THR THR A . n A 1 137 LEU 137 462 462 LEU LEU A . n A 1 138 ALA 138 463 463 ALA ALA A . n A 1 139 CYS 139 464 464 CYS CYS A . n A 1 140 LEU 140 465 465 LEU LEU A . n A 1 141 ILE 141 466 466 ILE ILE A . n A 1 142 GLN 142 467 467 GLN GLN A . n A 1 143 ASN 143 468 468 ASN ASN A . n A 1 144 PHE 144 469 469 PHE PHE A . n A 1 145 MET 145 470 470 MET MET A . n A 1 146 PRO 146 471 471 PRO PRO A . n A 1 147 GLU 147 472 472 GLU GLU A . n A 1 148 ASP 148 473 473 ASP ASP A . n A 1 149 ILE 149 474 474 ILE ILE A . n A 1 150 SER 150 475 475 SER SER A . n A 1 151 VAL 151 476 476 VAL VAL A . n A 1 152 GLN 152 477 477 GLN GLN A . n A 1 153 TRP 153 478 478 TRP TRP A . n A 1 154 LEU 154 479 479 LEU LEU A . n A 1 155 HIS 155 480 480 HIS HIS A . n A 1 156 ASN 156 481 481 ASN ASN A . n A 1 157 GLU 157 482 482 GLU GLU A . n A 1 158 VAL 158 483 483 VAL VAL A . n A 1 159 GLN 159 484 484 GLN GLN A . n A 1 160 LEU 160 485 485 LEU LEU A . n A 1 161 PRO 161 486 486 PRO PRO A . n A 1 162 ASP 162 487 487 ASP ASP A . n A 1 163 ALA 163 488 488 ALA ALA A . n A 1 164 ARG 164 489 489 ARG ARG A . n A 1 165 HIS 165 490 490 HIS HIS A . n A 1 166 SER 166 491 491 SER SER A . n A 1 167 THR 167 492 492 THR THR A . n A 1 168 THR 168 493 493 THR THR A . n A 1 169 GLN 169 494 494 GLN GLN A . n A 1 170 PRO 170 495 495 PRO PRO A . n A 1 171 ARG 171 496 496 ARG ARG A . n A 1 172 LYS 172 497 497 LYS LYS A . n A 1 173 THR 173 498 498 THR THR A . n A 1 174 LYS 174 499 499 LYS LYS A . n A 1 175 GLY 175 500 500 GLY GLY A . n A 1 176 SER 176 501 501 SER SER A . n A 1 177 GLY 177 502 502 GLY GLY A . n A 1 178 PHE 178 503 503 PHE PHE A . n A 1 179 PHE 179 504 504 PHE PHE A . n A 1 180 VAL 180 505 505 VAL VAL A . n A 1 181 PHE 181 506 506 PHE PHE A . n A 1 182 SER 182 507 507 SER SER A . n A 1 183 ARG 183 508 508 ARG ARG A . n A 1 184 LEU 184 509 509 LEU LEU A . n A 1 185 GLU 185 510 510 GLU GLU A . n A 1 186 VAL 186 511 511 VAL VAL A . n A 1 187 THR 187 512 512 THR THR A . n A 1 188 ARG 188 513 513 ARG ARG A . n A 1 189 ALA 189 514 514 ALA ALA A . n A 1 190 GLU 190 515 515 GLU GLU A . n A 1 191 TRP 191 516 516 TRP TRP A . n A 1 192 GLU 192 517 517 GLU GLU A . n A 1 193 GLN 193 518 518 GLN ALA A . n A 1 194 LYS 194 519 519 LYS LYS A . n A 1 195 ASP 195 520 520 ASP ASP A . n A 1 196 GLU 196 521 521 GLU GLU A . n A 1 197 PHE 197 522 522 PHE PHE A . n A 1 198 ILE 198 523 523 ILE ILE A . n A 1 199 CYS 199 524 524 CYS CYS A . n A 1 200 ARG 200 525 525 ARG ARG A . n A 1 201 ALA 201 526 526 ALA ALA A . n A 1 202 VAL 202 527 527 VAL VAL A . n A 1 203 HIS 203 528 528 HIS HIS A . n A 1 204 GLU 204 529 529 GLU GLU A . n A 1 205 ALA 205 530 530 ALA ALA A . n A 1 206 ALA 206 531 531 ALA ALA A . n A 1 207 SER 207 532 532 SER SER A . n A 1 208 PRO 208 533 533 PRO PRO A . n A 1 209 SER 209 534 534 SER SER A . n A 1 210 GLN 210 535 535 GLN GLN A . n A 1 211 THR 211 536 536 THR THR A . n A 1 212 VAL 212 537 537 VAL VAL A . n A 1 213 GLN 213 538 538 GLN GLN A . n A 1 214 ARG 214 539 539 ARG ARG A . n A 1 215 ALA 215 540 540 ALA ALA A . n A 1 216 VAL 216 541 541 VAL VAL A . n A 1 217 SER 217 542 542 SER SER A . n A 1 218 VAL 218 543 543 VAL VAL A . n A 1 219 ASN 219 544 ? ? ? A . n A 1 220 PRO 220 545 ? ? ? A . n A 1 221 GLY 221 546 ? ? ? A . n A 1 222 LYS 222 547 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0.0000000000 -1.0000000000 0.0000000000 105.6000000000 -1.0000000000 0.0000000000 0.0000000000 105.6000000000 0.0000000000 0.0000000000 -1.0000000000 47.1000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-09-27 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A GLY 368 ? ? CA A GLY 368 ? ? C A GLY 368 ? ? 97.81 113.10 -15.29 2.50 N 2 1 N A GLY 455 ? ? CA A GLY 455 ? ? C A GLY 455 ? ? 95.26 113.10 -17.84 2.50 N 3 1 N A SER 456 ? ? CA A SER 456 ? ? C A SER 456 ? ? 130.23 111.00 19.23 2.70 N 4 1 N A ARG 457 ? ? CA A ARG 457 ? ? C A ARG 457 ? ? 86.85 111.00 -24.15 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 350 ? ? -90.89 -64.50 2 1 ARG A 393 ? ? -53.65 4.09 3 1 PRO A 426 ? ? -59.66 -71.20 4 1 PRO A 454 ? ? -35.80 176.94 5 1 ARG A 457 ? ? -171.25 120.45 6 1 LYS A 459 ? ? 172.09 106.42 7 1 PRO A 471 ? ? -62.01 -177.94 8 1 ASN A 481 ? ? 80.39 -113.76 9 1 ALA A 488 ? ? -47.31 -13.07 10 1 THR A 498 ? ? -145.80 -158.10 11 1 GLN A 535 ? ? 35.82 41.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 391 ? CG ? A LYS 66 CG 2 1 Y 1 A LYS 391 ? CD ? A LYS 66 CD 3 1 Y 1 A LYS 391 ? CE ? A LYS 66 CE 4 1 Y 1 A LYS 391 ? NZ ? A LYS 66 NZ 5 1 Y 1 A ARG 408 ? CG ? A ARG 83 CG 6 1 Y 1 A ARG 408 ? CD ? A ARG 83 CD 7 1 Y 1 A ARG 408 ? NE ? A ARG 83 NE 8 1 Y 1 A ARG 408 ? CZ ? A ARG 83 CZ 9 1 Y 1 A ARG 408 ? NH1 ? A ARG 83 NH1 10 1 Y 1 A ARG 408 ? NH2 ? A ARG 83 NH2 11 1 Y 1 A LYS 435 ? CG ? A LYS 110 CG 12 1 Y 1 A LYS 435 ? CD ? A LYS 110 CD 13 1 Y 1 A LYS 435 ? CE ? A LYS 110 CE 14 1 Y 1 A LYS 435 ? NZ ? A LYS 110 NZ 15 1 Y 1 A GLU 444 ? CG ? A GLU 119 CG 16 1 Y 1 A GLU 444 ? CD ? A GLU 119 CD 17 1 Y 1 A GLU 444 ? OE1 ? A GLU 119 OE1 18 1 Y 1 A GLU 444 ? OE2 ? A GLU 119 OE2 19 1 Y 1 A ARG 457 ? CG ? A ARG 132 CG 20 1 Y 1 A ARG 457 ? CD ? A ARG 132 CD 21 1 Y 1 A ARG 457 ? NE ? A ARG 132 NE 22 1 Y 1 A ARG 457 ? CZ ? A ARG 132 CZ 23 1 Y 1 A ARG 457 ? NH1 ? A ARG 132 NH1 24 1 Y 1 A ARG 457 ? NH2 ? A ARG 132 NH2 25 1 Y 1 A GLN 518 ? CG ? A GLN 193 CG 26 1 Y 1 A GLN 518 ? CD ? A GLN 193 CD 27 1 Y 1 A GLN 518 ? OE1 ? A GLN 193 OE1 28 1 Y 1 A GLN 518 ? NE2 ? A GLN 193 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 326 ? A ALA 1 2 1 Y 1 A ASP 327 ? A ASP 2 3 1 Y 1 A PRO 328 ? A PRO 3 4 1 Y 1 A CYS 329 ? A CYS 4 5 1 Y 1 A ASP 330 ? A ASP 5 6 1 Y 1 A SER 331 ? A SER 6 7 1 Y 1 A ASN 332 ? A ASN 7 8 1 Y 1 A PRO 333 ? A PRO 8 9 1 Y 1 A ARG 334 ? A ARG 9 10 1 Y 1 A GLY 335 ? A GLY 10 11 1 Y 1 A ASN 544 ? A ASN 219 12 1 Y 1 A PRO 545 ? A PRO 220 13 1 Y 1 A GLY 546 ? A GLY 221 14 1 Y 1 A LYS 547 ? A LYS 222 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH WAT A . B 2 HOH 2 2 2 HOH WAT A . B 2 HOH 3 3 3 HOH WAT A . B 2 HOH 4 4 4 HOH WAT A . B 2 HOH 5 5 5 HOH WAT A . B 2 HOH 6 6 6 HOH WAT A . B 2 HOH 7 7 7 HOH WAT A . B 2 HOH 8 8 8 HOH WAT A . B 2 HOH 9 9 9 HOH WAT A . B 2 HOH 10 10 10 HOH WAT A . B 2 HOH 11 11 11 HOH WAT A . B 2 HOH 12 12 12 HOH WAT A . B 2 HOH 13 13 13 HOH WAT A . B 2 HOH 14 14 14 HOH WAT A . B 2 HOH 15 15 15 HOH WAT A . B 2 HOH 16 16 16 HOH WAT A . B 2 HOH 17 17 17 HOH WAT A . B 2 HOH 18 18 18 HOH WAT A . B 2 HOH 19 19 19 HOH WAT A . B 2 HOH 20 20 20 HOH WAT A . B 2 HOH 21 21 21 HOH WAT A . B 2 HOH 22 22 22 HOH WAT A . B 2 HOH 23 23 23 HOH WAT A . B 2 HOH 24 24 24 HOH WAT A . B 2 HOH 25 25 25 HOH WAT A . B 2 HOH 26 26 26 HOH WAT A . B 2 HOH 27 27 27 HOH WAT A . B 2 HOH 28 28 28 HOH WAT A . B 2 HOH 29 29 29 HOH WAT A . B 2 HOH 30 30 30 HOH WAT A . B 2 HOH 31 31 31 HOH WAT A . B 2 HOH 32 32 32 HOH WAT A . B 2 HOH 33 33 33 HOH WAT A . B 2 HOH 34 34 34 HOH WAT A . B 2 HOH 35 35 35 HOH WAT A . B 2 HOH 36 36 36 HOH WAT A . B 2 HOH 37 37 37 HOH WAT A . B 2 HOH 38 38 38 HOH WAT A . B 2 HOH 39 39 39 HOH WAT A . B 2 HOH 40 40 40 HOH WAT A . B 2 HOH 41 41 41 HOH WAT A . B 2 HOH 42 42 42 HOH WAT A . B 2 HOH 43 43 43 HOH WAT A . B 2 HOH 44 44 44 HOH WAT A . B 2 HOH 45 45 45 HOH WAT A . B 2 HOH 46 46 46 HOH WAT A . B 2 HOH 47 47 47 HOH WAT A . B 2 HOH 48 48 48 HOH WAT A . B 2 HOH 49 49 49 HOH WAT A . B 2 HOH 50 50 50 HOH WAT A . B 2 HOH 51 51 51 HOH WAT A . B 2 HOH 52 52 52 HOH WAT A . B 2 HOH 53 53 53 HOH WAT A . B 2 HOH 54 54 54 HOH WAT A . B 2 HOH 55 55 55 HOH WAT A . B 2 HOH 56 56 56 HOH WAT A . B 2 HOH 57 57 57 HOH WAT A . B 2 HOH 58 58 58 HOH WAT A . B 2 HOH 59 59 59 HOH WAT A . B 2 HOH 60 60 60 HOH WAT A . B 2 HOH 61 61 61 HOH WAT A . B 2 HOH 62 62 62 HOH WAT A . B 2 HOH 63 63 63 HOH WAT A . B 2 HOH 64 64 64 HOH WAT A . B 2 HOH 65 65 65 HOH WAT A . B 2 HOH 66 66 66 HOH WAT A . B 2 HOH 67 67 67 HOH WAT A . B 2 HOH 68 68 68 HOH WAT A . B 2 HOH 69 69 69 HOH WAT A . B 2 HOH 70 70 70 HOH WAT A . B 2 HOH 71 71 71 HOH WAT A . B 2 HOH 72 72 72 HOH WAT A . B 2 HOH 73 73 73 HOH WAT A . B 2 HOH 74 74 74 HOH WAT A . B 2 HOH 75 75 75 HOH WAT A . B 2 HOH 76 76 76 HOH WAT A . B 2 HOH 77 77 77 HOH WAT A . B 2 HOH 78 78 78 HOH WAT A . B 2 HOH 79 79 79 HOH WAT A . B 2 HOH 80 80 80 HOH WAT A . B 2 HOH 81 81 81 HOH WAT A . B 2 HOH 82 82 82 HOH WAT A . B 2 HOH 83 83 83 HOH WAT A . B 2 HOH 84 84 84 HOH WAT A . B 2 HOH 85 85 85 HOH WAT A . B 2 HOH 86 86 86 HOH WAT A . B 2 HOH 87 87 87 HOH WAT A . B 2 HOH 88 88 88 HOH WAT A . B 2 HOH 89 89 89 HOH WAT A . B 2 HOH 90 90 90 HOH WAT A . B 2 HOH 91 91 91 HOH WAT A . B 2 HOH 92 92 92 HOH WAT A . B 2 HOH 93 93 93 HOH WAT A . B 2 HOH 94 94 94 HOH WAT A . B 2 HOH 95 95 95 HOH WAT A . B 2 HOH 96 96 96 HOH WAT A . B 2 HOH 97 97 97 HOH WAT A . B 2 HOH 98 98 98 HOH WAT A . B 2 HOH 99 99 99 HOH WAT A . B 2 HOH 100 100 100 HOH WAT A . B 2 HOH 101 101 101 HOH WAT A . B 2 HOH 102 102 102 HOH WAT A . B 2 HOH 103 103 103 HOH WAT A . B 2 HOH 104 104 104 HOH WAT A . B 2 HOH 105 105 105 HOH WAT A . B 2 HOH 106 106 106 HOH WAT A . B 2 HOH 107 107 107 HOH WAT A . B 2 HOH 108 108 108 HOH WAT A . B 2 HOH 109 109 109 HOH WAT A . B 2 HOH 110 110 110 HOH WAT A . B 2 HOH 111 111 111 HOH WAT A . B 2 HOH 112 112 112 HOH WAT A . B 2 HOH 113 113 113 HOH WAT A . B 2 HOH 114 114 114 HOH WAT A . B 2 HOH 115 115 115 HOH WAT A . B 2 HOH 116 116 116 HOH WAT A . B 2 HOH 117 117 117 HOH WAT A . B 2 HOH 118 118 118 HOH WAT A . B 2 HOH 119 119 119 HOH WAT A . B 2 HOH 120 120 120 HOH WAT A . B 2 HOH 121 121 121 HOH WAT A . B 2 HOH 122 122 122 HOH WAT A . B 2 HOH 123 123 123 HOH WAT A . B 2 HOH 124 124 124 HOH WAT A . B 2 HOH 125 125 125 HOH WAT A . B 2 HOH 126 126 126 HOH WAT A . B 2 HOH 127 127 127 HOH WAT A . B 2 HOH 128 128 128 HOH WAT A . B 2 HOH 129 129 129 HOH WAT A . B 2 HOH 130 130 130 HOH WAT A . B 2 HOH 131 131 131 HOH WAT A . B 2 HOH 132 132 132 HOH WAT A . B 2 HOH 133 133 133 HOH WAT A . B 2 HOH 134 134 134 HOH WAT A . B 2 HOH 135 135 135 HOH WAT A . B 2 HOH 136 136 136 HOH WAT A . B 2 HOH 137 137 137 HOH WAT A . B 2 HOH 138 138 138 HOH WAT A . B 2 HOH 139 139 139 HOH WAT A . B 2 HOH 140 140 140 HOH WAT A . B 2 HOH 141 141 141 HOH WAT A . B 2 HOH 142 142 142 HOH WAT A . B 2 HOH 143 143 143 HOH WAT A . B 2 HOH 144 144 144 HOH WAT A . B 2 HOH 145 145 145 HOH WAT A . #