data_1FPH # _entry.id 1FPH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FPH WWPDB D_1000173367 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FPH _pdbx_database_status.recvd_initial_deposition_date 1993-04-21 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stubbs, M.T.' 1 'Bode, W.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The interaction of thrombin with fibrinogen. A structural basis for its specificity.' Eur.J.Biochem. 206 187 195 1992 EJBCAI IX 0014-2956 0262 ? 1587268 10.1111/j.1432-1033.1992.tb16916.x 1 ;A Player of Many Parts: The Spotlight Falls on Thrombin'S Structure ; Thromb.Res. 69 1 ? 1993 THBRAA US 0049-3848 0750 ? ? ? 2 ;The Refined 1.9 Angstroms X-Ray Crystal Structure of D-Phe-Pro-Arg Chloromethylketone-Inhibited Human Alpha-Thrombin: Structure Analysis, Overall Structure, Electrostatic Properties, Detailed Active-Site Geometry, and Structure-Function Relationships ; 'Protein Sci.' 1 426 ? 1992 PRCIEI US 0961-8368 0795 ? ? ? 3 'Refined Structure of the Hirudin-Thrombin Complex' J.Mol.Biol. 221 583 ? 1991 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stubbs, M.T.' 1 primary 'Oschkinat, H.' 2 primary 'Mayr, I.' 3 primary 'Huber, R.' 4 primary 'Angliker, H.' 5 primary 'Stone, S.R.' 6 primary 'Bode, W.' 7 1 'Stubbs, M.T.' 8 1 'Bode, W.' 9 2 'Bode, W.' 10 2 'Turk, D.' 11 2 'Karshikov, A.' 12 3 'Rydel, T.J.' 13 3 'Tulinsky, A.' 14 3 'Bode, W.' 15 3 'Huber, R.' 16 # _cell.entry_id 1FPH _cell.length_a 90.340 _cell.length_b 90.340 _cell.length_c 132.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FPH _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ALPHA-THROMBIN (SMALL SUBUNIT)' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'ALPHA-THROMBIN (LARGE SUBUNIT)' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn HIRUDIN 1468.517 1 ? ? ? ? 4 polymer syn 'FIBRINOPEPTIDE A' 1081.633 1 ? ? ? ? 5 water nat water 18.015 168 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no no GDFEEIPEEYLQ GDFEEIPEEYLQ I ? 4 'polypeptide(L)' no yes '(ACE)DFLAEGGGV(AR7)(0QE)' XDFLAEGGGVRX F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 GLY n 3 2 ASP n 3 3 PHE n 3 4 GLU n 3 5 GLU n 3 6 ILE n 3 7 PRO n 3 8 GLU n 3 9 GLU n 3 10 TYR n 3 11 LEU n 3 12 GLN n 4 1 ACE n 4 2 ASP n 4 3 PHE n 4 4 LEU n 4 5 ALA n 4 6 GLU n 4 7 GLY n 4 8 GLY n 4 9 GLY n 4 10 VAL n 4 11 AR7 n 4 12 0QE n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? 'Hirudo medicinalis' 6421 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 P00734 1 UNP THRB_HUMAN 1 ;MAHVRGLQLPGCLALAALCSLVHSQHVFLAPQQARSLLQRVRRANTFLEEVRKGNLERECVEETCSYEEAFEALESSTAT DVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRYPHKPEINSTTHPGADLQENFCRNP DSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMTPRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASA QAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGRTATSEY QTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRW VLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKR GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; ? 2 P00734 2 UNP THRB_HUMAN 1 ;MAHVRGLQLPGCLALAALCSLVHSQHVFLAPQQARSLLQRVRRANTFLEEVRKGNLERECVEETCSYEEAFEALESSTAT DVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRYPHKPEINSTTHPGADLQENFCRNP DSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMTPRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASA QAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGRTATSEY QTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRW VLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKR GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; ? 3 1FPH 3 PDB 1FPH 1 GDFEEIPEEYLQ ? 4 1FPH 4 PDB 1FPH 1 XDFLAEGGGVRX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FPH L 1 H 36 ? P00734 328 ? 363 ? 1 15 2 2 1FPH H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 1FPH I 1 ? 12 ? 1FPH 1 ? 12 ? 54 65 4 4 1FPH F 1 ? 12 ? 1FPH 1 ? 12 ? 6 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0QE non-polymer . chloromethane 'Chloro Methyl group' 'C H3 Cl' 50.488 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AR7 peptide-like n 'amino{[(4S)-4-amino-5,5-dihydroxypentyl]amino}methaniminium' ? 'C6 H17 N4 O2 1' 177.225 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FPH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.71 _exptl_crystal.density_percent_sol 66.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1FPH _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.5 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.166 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2559 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 2727 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low . # _struct.entry_id 1FPH _struct.title 'THE INTERACTION OF THROMBIN WITH FIBRINOGEN: A STRUCTURAL BASIS FOR ITS SPECIFICITY' _struct.pdbx_descriptor 'ALPHA-THROMBIN (E.C.3.4.21.5) TERNARY COMPLEX WITH HIRUDIN AND FIBRINOPEPTIDE A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FPH _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HYDROLASE, SERINE PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 25 _struct_conf.pdbx_beg_PDB_ins_code C _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 31 _struct_conf.pdbx_end_PDB_ins_code I _struct_conf.beg_auth_comp_id GLU _struct_conf.beg_auth_asym_id L _struct_conf.beg_auth_seq_id 14 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id L _struct_conf.end_auth_seq_id 14 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details 3.6/13 _struct_conf.pdbx_PDB_helix_length 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.044 ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.067 ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.027 ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.060 ? covale1 covale ? ? D ACE 1 C ? ? ? 1_555 D ASP 2 N ? ? F ACE 6 F ASP 7 1_555 ? ? ? ? ? ? ? 1.321 ? covale2 covale ? ? B HIS 43 NE2 ? ? ? 1_555 D 0QE 12 C1 ? ? H HIS 57 F 0QE 17 1_555 ? ? ? ? ? ? ? 1.392 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 37 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 A _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -11.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 6 ? C ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 5 TRP B 219 ? GLY B 228 ? TRP H 207 GLY H 216 A 6 GLY B 238 ? THR B 241 ? GLY H 226 THR H 229 A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 B 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 B 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 B 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 B 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 B 5 TRP B 219 ? GLY B 228 ? TRP H 207 GLY H 216 B 6 GLY D 9 ? VAL D 10 ? GLY F 14 VAL F 15 C 1 LYS B 77 ? SER B 79 ? LYS H 81 SER H 83 C 2 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 C 3 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 C 4 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 C 5 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 C 6 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 C 7 LEU B 81 ? ILE B 86 ? LEU H 85 ILE H 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER B 5 ? O SER H 20 N VAL B 162 ? N VAL H 157 A 2 3 O LEU B 165 ? O LEU H 160 N GLY B 136 ? N GLY H 136 A 3 4 N THR B 139 ? N THR H 139 O PRO B 208 ? O PRO H 198 A 4 5 O MET B 211 ? O MET H 201 N TYR B 220 ? N TYR H 208 A 5 6 O TRP B 227 ? O TRP H 215 N PHE B 239 ? N PHE H 227 A 6 7 N TYR B 240 ? N TYR H 228 O PHE B 186 ? O PHE H 181 B 1 2 O SER B 5 ? O SER H 20 N VAL B 162 ? N VAL H 157 B 2 3 O LEU B 165 ? O LEU H 160 N GLY B 136 ? N GLY H 136 B 3 4 N THR B 139 ? N THR H 139 O PRO B 208 ? O PRO H 198 B 4 5 O MET B 211 ? O MET H 201 N TYR B 220 ? N TYR H 208 B 5 6 N GLY B 228 ? N GLY H 216 O GLY D 9 ? O GLY F 14 C 1 2 N SER B 79 ? N SER H 83 O VAL B 61 ? O VAL H 66 C 2 3 O ARG B 62 ? O ARG H 67 N MET B 17 ? N MET H 32 C 3 4 N ARG B 20 ? N ARG H 35 O GLU B 25 ? O GLU H 39 C 4 5 O SER B 31 ? O SER H 45 N LEU B 39 ? N LEU H 53 C 5 6 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 C 6 7 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 26 'BINDING SITE FOR CHAIN I OF HIRUDIN' AC2 Software ? ? ? ? 19 'BINDING SITE FOR CHAIN F OF FIBRINOPEPTIDE A' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 PHE B 19 ? PHE H 34 . ? 1_555 ? 2 AC1 26 LYS B 21 ? LYS H 36 . ? 1_555 ? 3 AC1 26 LEU B 26 ? LEU H 40 . ? 1_555 ? 4 AC1 26 LEU B 60 ? LEU H 65 . ? 1_555 ? 5 AC1 26 ARG B 68 ? ARG H 73 . ? 1_555 ? 6 AC1 26 THR B 69 ? THR H 74 . ? 1_555 ? 7 AC1 26 ARG B 70 ? ARG H 75 . ? 8_665 ? 8 AC1 26 ARG B 70 ? ARG H 75 . ? 1_555 ? 9 AC1 26 TYR B 71 ? TYR H 76 . ? 1_555 ? 10 AC1 26 ARG B 73 A ARG H 77 . ? 1_555 ? 11 AC1 26 ARG B 89 ? ARG H 93 . ? 4_465 ? 12 AC1 26 ARG B 98 ? ARG H 101 . ? 4_465 ? 13 AC1 26 LYS B 154 E LYS H 149 . ? 1_555 ? 14 AC1 26 SER B 158 ? SER H 153 . ? 8_665 ? 15 AC1 26 LYS B 248 ? LYS H 236 . ? 4_465 ? 16 AC1 26 TRP B 249 ? TRP H 237 . ? 4_465 ? 17 AC1 26 GLN B 251 ? GLN H 239 . ? 4_465 ? 18 AC1 26 LYS B 252 ? LYS H 240 . ? 4_465 ? 19 AC1 26 HOH F . ? HOH H 389 . ? 1_555 ? 20 AC1 26 HOH F . ? HOH H 475 . ? 8_665 ? 21 AC1 26 HOH F . ? HOH H 482 . ? 1_555 ? 22 AC1 26 HOH F . ? HOH H 485 . ? 1_555 ? 23 AC1 26 HOH F . ? HOH H 536 . ? 8_665 ? 24 AC1 26 HOH G . ? HOH I 387 . ? 1_555 ? 25 AC1 26 HOH G . ? HOH I 392 . ? 1_555 ? 26 AC1 26 HOH G . ? HOH I 399 . ? 1_555 ? 27 AC2 19 HIS B 43 ? HIS H 57 . ? 1_555 ? 28 AC2 19 TYR B 47 A TYR H 60 . ? 1_555 ? 29 AC2 19 PRO B 49 C PRO H 60 . ? 1_555 ? 30 AC2 19 TRP B 50 D TRP H 60 . ? 1_555 ? 31 AC2 19 ARG B 93 ? ARG H 97 . ? 1_555 ? 32 AC2 19 GLU B 94 A GLU H 97 . ? 1_555 ? 33 AC2 19 LEU B 96 ? LEU H 99 . ? 1_555 ? 34 AC2 19 ARG B 178 ? ARG H 173 . ? 1_555 ? 35 AC2 19 ILE B 179 ? ILE H 174 . ? 1_555 ? 36 AC2 19 ASP B 199 ? ASP H 189 . ? 1_555 ? 37 AC2 19 ALA B 200 ? ALA H 190 . ? 1_555 ? 38 AC2 19 CYS B 201 ? CYS H 191 . ? 1_555 ? 39 AC2 19 GLY B 203 ? GLY H 193 . ? 1_555 ? 40 AC2 19 SER B 205 ? SER H 195 . ? 1_555 ? 41 AC2 19 SER B 226 ? SER H 214 . ? 1_555 ? 42 AC2 19 TRP B 227 ? TRP H 215 . ? 1_555 ? 43 AC2 19 GLY B 228 ? GLY H 216 . ? 1_555 ? 44 AC2 19 GLU B 229 ? GLU H 217 . ? 1_555 ? 45 AC2 19 GLY B 230 ? GLY H 219 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FPH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FPH _atom_sites.fract_transf_matrix[1][1] 0.011069 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011069 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007556 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.text 'THE OG SER H - CF AR7 F BOND IS OUTSIDE ACCEPTED RANGE' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR L H n A 1 2 PHE 2 1 1 PHE PHE L G n A 1 3 GLY 3 1 1 GLY GLY L F n A 1 4 SER 4 1 1 SER SER L E n A 1 5 GLY 5 1 1 GLY GLY L D n A 1 6 GLU 6 1 1 GLU GLU L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 14 14 ASP ASP L L n A 1 35 GLY 35 14 14 GLY GLY L M n A 1 36 ARG 36 15 15 ARG ARG L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 37 37 SER SER H . n B 2 23 PRO 23 37 37 PRO PRO H A n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 148 TRP TRP H . n B 2 149 THR 149 149 149 THR THR H . n B 2 150 ALA 150 149 149 ALA ALA H A n B 2 151 ASN 151 149 149 ASN ASN H B n B 2 152 VAL 152 149 149 VAL VAL H C n B 2 153 GLY 153 149 149 GLY GLY H D n B 2 154 LYS 154 149 149 LYS LYS H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H A n B 2 190 TYR 190 184 184 TYR TYR H . n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H A n B 2 233 ARG 233 221 221 ARG ARG H . n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 247 GLU GLU H . n C 3 1 GLY 1 54 54 GLY GLY I . n C 3 2 ASP 2 55 55 ASP ASP I . n C 3 3 PHE 3 56 56 PHE PHE I . n C 3 4 GLU 4 57 57 GLU GLU I . n C 3 5 GLU 5 58 58 GLU GLU I . n C 3 6 ILE 6 59 59 ILE ILE I . n C 3 7 PRO 7 60 60 PRO PRO I . n C 3 8 GLU 8 61 61 GLU GLU I . n C 3 9 GLU 9 62 62 GLU GLU I . n C 3 10 TYR 10 63 63 TYR TYR I . n C 3 11 LEU 11 64 64 LEU LEU I . n C 3 12 GLN 12 65 65 GLN GLN I . n D 4 1 ACE 1 6 6 ACE ACE F . n D 4 2 ASP 2 7 7 ASP ASP F . n D 4 3 PHE 3 8 8 PHE PHE F . n D 4 4 LEU 4 9 9 LEU LEU F . n D 4 5 ALA 5 10 10 ALA ALA F . n D 4 6 GLU 6 11 11 GLU GLU F . n D 4 7 GLY 7 12 12 GLY GLY F . n D 4 8 GLY 8 13 13 GLY GLY F . n D 4 9 GLY 9 14 14 GLY GLY F . n D 4 10 VAL 10 15 15 VAL VAL F . n D 4 11 AR7 11 16 16 AR7 ARG F . n D 4 12 0QE 12 17 17 0QE CH2 F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HOH 1 304 304 HOH HOH L . E 5 HOH 2 321 321 HOH HOH L . E 5 HOH 3 325 325 HOH HOH L . E 5 HOH 4 340 340 HOH HOH L . E 5 HOH 5 348 348 HOH HOH L . E 5 HOH 6 349 349 HOH HOH L . E 5 HOH 7 350 350 HOH HOH L . E 5 HOH 8 371 371 HOH HOH L . E 5 HOH 9 377 377 HOH HOH L . E 5 HOH 10 466 466 HOH HOH L . E 5 HOH 11 468 468 HOH HOH L . E 5 HOH 12 474 474 HOH HOH L . E 5 HOH 13 481 481 HOH HOH L . E 5 HOH 14 508 508 HOH HOH L . E 5 HOH 15 510 510 HOH HOH L . E 5 HOH 16 512 512 HOH HOH L . E 5 HOH 17 518 518 HOH HOH L . E 5 HOH 18 520 520 HOH HOH L . E 5 HOH 19 525 525 HOH HOH L . E 5 HOH 20 534 534 HOH HOH L . E 5 HOH 21 602 602 HOH HOH L . E 5 HOH 22 605 605 HOH HOH L . F 5 HOH 1 300 300 HOH HOH H . F 5 HOH 2 301 301 HOH HOH H . F 5 HOH 3 302 302 HOH HOH H . F 5 HOH 4 303 303 HOH HOH H . F 5 HOH 5 306 306 HOH HOH H . F 5 HOH 6 307 307 HOH HOH H . F 5 HOH 7 308 308 HOH HOH H . F 5 HOH 8 310 310 HOH HOH H . F 5 HOH 9 311 311 HOH HOH H . F 5 HOH 10 312 312 HOH HOH H . F 5 HOH 11 313 313 HOH HOH H . F 5 HOH 12 314 314 HOH HOH H . F 5 HOH 13 315 315 HOH HOH H . F 5 HOH 14 316 316 HOH HOH H . F 5 HOH 15 317 317 HOH HOH H . F 5 HOH 16 318 318 HOH HOH H . F 5 HOH 17 319 319 HOH HOH H . F 5 HOH 18 322 322 HOH HOH H . F 5 HOH 19 323 323 HOH HOH H . F 5 HOH 20 324 324 HOH HOH H . F 5 HOH 21 326 326 HOH HOH H . F 5 HOH 22 327 327 HOH HOH H . F 5 HOH 23 328 328 HOH HOH H . F 5 HOH 24 329 329 HOH HOH H . F 5 HOH 25 331 331 HOH HOH H . F 5 HOH 26 332 332 HOH HOH H . F 5 HOH 27 333 333 HOH HOH H . F 5 HOH 28 334 334 HOH HOH H . F 5 HOH 29 337 337 HOH HOH H . F 5 HOH 30 339 339 HOH HOH H . F 5 HOH 31 342 342 HOH HOH H . F 5 HOH 32 343 343 HOH HOH H . F 5 HOH 33 344 344 HOH HOH H . F 5 HOH 34 345 345 HOH HOH H . F 5 HOH 35 347 347 HOH HOH H . F 5 HOH 36 353 353 HOH HOH H . F 5 HOH 37 354 354 HOH HOH H . F 5 HOH 38 356 356 HOH HOH H . F 5 HOH 39 358 358 HOH HOH H . F 5 HOH 40 359 359 HOH HOH H . F 5 HOH 41 360 360 HOH HOH H . F 5 HOH 42 361 361 HOH HOH H . F 5 HOH 43 362 362 HOH HOH H . F 5 HOH 44 363 363 HOH HOH H . F 5 HOH 45 364 364 HOH HOH H . F 5 HOH 46 365 365 HOH HOH H . F 5 HOH 47 366 366 HOH HOH H . F 5 HOH 48 367 367 HOH HOH H . F 5 HOH 49 368 368 HOH HOH H . F 5 HOH 50 369 369 HOH HOH H . F 5 HOH 51 370 370 HOH HOH H . F 5 HOH 52 372 372 HOH HOH H . F 5 HOH 53 373 373 HOH HOH H . F 5 HOH 54 374 374 HOH HOH H . F 5 HOH 55 376 376 HOH HOH H . F 5 HOH 56 378 378 HOH HOH H . F 5 HOH 57 379 379 HOH HOH H . F 5 HOH 58 380 380 HOH HOH H . F 5 HOH 59 381 381 HOH HOH H . F 5 HOH 60 382 382 HOH HOH H . F 5 HOH 61 383 383 HOH HOH H . F 5 HOH 62 384 384 HOH HOH H . F 5 HOH 63 386 386 HOH HOH H . F 5 HOH 64 388 388 HOH HOH H . F 5 HOH 65 389 389 HOH HOH H . F 5 HOH 66 390 390 HOH HOH H . F 5 HOH 67 391 391 HOH HOH H . F 5 HOH 68 393 393 HOH HOH H . F 5 HOH 69 394 394 HOH HOH H . F 5 HOH 70 395 395 HOH HOH H . F 5 HOH 71 400 400 HOH HOH H . F 5 HOH 72 450 450 HOH HOH H . F 5 HOH 73 451 451 HOH HOH H . F 5 HOH 74 452 452 HOH HOH H . F 5 HOH 75 453 453 HOH HOH H . F 5 HOH 76 454 454 HOH HOH H . F 5 HOH 77 455 455 HOH HOH H . F 5 HOH 78 456 456 HOH HOH H . F 5 HOH 79 457 457 HOH HOH H . F 5 HOH 80 458 458 HOH HOH H . F 5 HOH 81 459 459 HOH HOH H . F 5 HOH 82 460 460 HOH HOH H . F 5 HOH 83 461 461 HOH HOH H . F 5 HOH 84 462 462 HOH HOH H . F 5 HOH 85 465 465 HOH HOH H . F 5 HOH 86 467 467 HOH HOH H . F 5 HOH 87 469 469 HOH HOH H . F 5 HOH 88 470 470 HOH HOH H . F 5 HOH 89 471 471 HOH HOH H . F 5 HOH 90 473 473 HOH HOH H . F 5 HOH 91 475 475 HOH HOH H . F 5 HOH 92 476 476 HOH HOH H . F 5 HOH 93 477 477 HOH HOH H . F 5 HOH 94 478 478 HOH HOH H . F 5 HOH 95 479 479 HOH HOH H . F 5 HOH 96 480 480 HOH HOH H . F 5 HOH 97 482 482 HOH HOH H . F 5 HOH 98 484 484 HOH HOH H . F 5 HOH 99 485 485 HOH HOH H . F 5 HOH 100 488 488 HOH HOH H . F 5 HOH 101 489 489 HOH HOH H . F 5 HOH 102 490 490 HOH HOH H . F 5 HOH 103 492 492 HOH HOH H . F 5 HOH 104 493 493 HOH HOH H . F 5 HOH 105 500 500 HOH HOH H . F 5 HOH 106 501 501 HOH HOH H . F 5 HOH 107 502 502 HOH HOH H . F 5 HOH 108 503 503 HOH HOH H . F 5 HOH 109 504 504 HOH HOH H . F 5 HOH 110 505 505 HOH HOH H . F 5 HOH 111 506 506 HOH HOH H . F 5 HOH 112 507 507 HOH HOH H . F 5 HOH 113 511 511 HOH HOH H . F 5 HOH 114 513 513 HOH HOH H . F 5 HOH 115 514 514 HOH HOH H . F 5 HOH 116 515 515 HOH HOH H . F 5 HOH 117 516 516 HOH HOH H . F 5 HOH 118 517 517 HOH HOH H . F 5 HOH 119 519 519 HOH HOH H . F 5 HOH 120 521 521 HOH HOH H . F 5 HOH 121 522 522 HOH HOH H . F 5 HOH 122 523 523 HOH HOH H . F 5 HOH 123 524 524 HOH HOH H . F 5 HOH 124 526 526 HOH HOH H . F 5 HOH 125 527 527 HOH HOH H . F 5 HOH 126 528 528 HOH HOH H . F 5 HOH 127 529 529 HOH HOH H . F 5 HOH 128 530 530 HOH HOH H . F 5 HOH 129 531 531 HOH HOH H . F 5 HOH 130 532 532 HOH HOH H . F 5 HOH 131 533 533 HOH HOH H . F 5 HOH 132 535 535 HOH HOH H . F 5 HOH 133 536 536 HOH HOH H . F 5 HOH 134 537 537 HOH HOH H . F 5 HOH 135 538 538 HOH HOH H . F 5 HOH 136 600 600 HOH HOH H . F 5 HOH 137 609 609 HOH HOH H . F 5 HOH 138 610 610 HOH HOH H . F 5 HOH 139 611 611 HOH HOH H . F 5 HOH 140 614 614 HOH HOH H . G 5 HOH 1 387 387 HOH HOH I . G 5 HOH 2 392 392 HOH HOH I . G 5 HOH 3 397 397 HOH HOH I . G 5 HOH 4 399 399 HOH HOH I . H 5 HOH 1 336 336 HOH HOH F . H 5 HOH 2 352 352 HOH HOH F . # _pdbx_molecule_features.prd_id PRD_000379 _pdbx_molecule_features.name 'N-acetylated chloromethylated fibrinopeptide A' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000379 _pdbx_molecule.asym_id D # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id D _pdbx_struct_mod_residue.label_comp_id AR7 _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id F _pdbx_struct_mod_residue.auth_comp_id AR7 _pdbx_struct_mod_residue.auth_seq_id 16 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ARG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5390 ? 1 MORE -20 ? 1 'SSA (A^2)' 14410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-31 2 'Structure model' 1 1 2008-03-06 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other # _software.name EREF _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 1FPH _pdbx_entry_details.compound_details ;THE FIBRINOPEPTIDE A CONTAINS A C-TERMINAL CHLOROMETHYLKETONE GROUP TO FORM COVALENT BONDS WITH THE ACTIVE-SITE RESIDUES OF THROMBIN. IT IS COVALENTLY CONNECTED TO THROMBIN 1) VIA RESIDUE AR7 TO OG SER H 195 FORMING A HEMIKETAL AND 2) VIA A METHYLENE GROUP OF 0QE TO NE2 HIS H 57. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN INDICATOR *L* IS USED FOR RESIDUES 1H - 15 AND CHAIN INDICATOR *H* IS USED FOR RESIDUES 16 - 247. CHAIN INDICATOR *I* IS USED FOR HIRUDIN. CHAIN INDICATOR *F* IS USED FOR FIBRINOPEPTIDE A. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C F AR7 16 ? ? C1 F 0QE 17 ? ? 1.51 2 1 OG H SER 195 ? ? C F AR7 16 ? ? 1.84 3 1 OG H SER 195 ? ? C1 F 0QE 17 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O L GLY 1 F ? 1_555 ND2 H ASN 149 B ? 6_565 0.69 2 1 O L HOH 534 ? ? 1_555 O H HOH 460 ? ? 3_654 0.85 3 1 O L GLY 1 F ? 1_555 CG H ASN 149 B ? 6_565 1.40 4 1 C L GLY 1 F ? 1_555 ND2 H ASN 149 B ? 6_565 1.42 5 1 O L GLY 1 F ? 1_555 CB H ASN 149 B ? 6_565 2.06 6 1 N L SER 1 E ? 1_555 ND2 H ASN 149 B ? 6_565 2.06 7 1 CE1 L PHE 1 G ? 1_555 CZ L PHE 1 G ? 7_555 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE1 H TRP 29 ? ? CE2 H TRP 29 ? ? 1.279 1.371 -0.092 0.013 N 2 1 NE1 H TRP 51 ? ? CE2 H TRP 51 ? ? 1.273 1.371 -0.098 0.013 N 3 1 NE1 H TRP 60 D ? CE2 H TRP 60 D ? 1.278 1.371 -0.093 0.013 N 4 1 NE1 H TRP 96 ? ? CE2 H TRP 96 ? ? 1.268 1.371 -0.103 0.013 N 5 1 NE1 H TRP 141 ? ? CE2 H TRP 141 ? ? 1.281 1.371 -0.090 0.013 N 6 1 NE1 H TRP 148 ? ? CE2 H TRP 148 ? ? 1.270 1.371 -0.101 0.013 N 7 1 NE1 H TRP 207 ? ? CE2 H TRP 207 ? ? 1.283 1.371 -0.088 0.013 N 8 1 NE1 H TRP 215 ? ? CE2 H TRP 215 ? ? 1.274 1.371 -0.097 0.013 N 9 1 NE1 H TRP 237 ? ? CE2 H TRP 237 ? ? 1.278 1.371 -0.093 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N L ARG 4 ? ? CA L ARG 4 ? ? CB L ARG 4 ? ? 97.44 110.60 -13.16 1.80 N 2 1 NE H ARG 35 ? ? CZ H ARG 35 ? ? NH1 H ARG 35 ? ? 116.74 120.30 -3.56 0.50 N 3 1 NE H ARG 50 ? ? CZ H ARG 50 ? ? NH1 H ARG 50 ? ? 124.57 120.30 4.27 0.50 N 4 1 NE H ARG 50 ? ? CZ H ARG 50 ? ? NH2 H ARG 50 ? ? 116.70 120.30 -3.60 0.50 N 5 1 NE H ARG 67 ? ? CZ H ARG 67 ? ? NH1 H ARG 67 ? ? 124.74 120.30 4.44 0.50 N 6 1 NE H ARG 101 ? ? CZ H ARG 101 ? ? NH2 H ARG 101 ? ? 117.07 120.30 -3.23 0.50 N 7 1 NE H ARG 137 ? ? CZ H ARG 137 ? ? NH1 H ARG 137 ? ? 123.34 120.30 3.04 0.50 N 8 1 CA H CYS 182 ? ? CB H CYS 182 ? ? SG H CYS 182 ? ? 122.74 114.20 8.54 1.10 N 9 1 CD H ARG 221 ? ? NE H ARG 221 ? ? CZ H ARG 221 ? ? 113.17 123.60 -10.43 1.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU L 1 C ? 55.37 135.60 2 1 ALA L 1 B ? 73.11 107.63 3 1 PHE L 7 ? ? -119.66 -92.71 4 1 ASP L 14 L ? 72.58 101.62 5 1 GLU H 18 ? ? 70.81 30.90 6 1 GLN H 38 ? ? -55.87 103.38 7 1 CYS H 42 ? ? -172.59 -176.48 8 1 ARG H 77 A ? -33.66 -33.92 9 1 ASP H 102 ? ? -67.43 71.69 10 1 VAL H 149 C ? -102.80 67.82 11 1 SER H 214 ? ? -114.43 -75.70 12 1 HIS H 230 ? ? -63.82 91.39 13 1 PHE H 245 ? ? -95.37 51.55 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 I _pdbx_validate_peptide_omega.auth_seq_id_1 58 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ILE _pdbx_validate_peptide_omega.auth_asym_id_2 I _pdbx_validate_peptide_omega.auth_seq_id_2 59 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.18 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 GLY L 1 F ? -10.84 2 1 ALA H 55 ? ? 11.37 3 1 PRO H 124 ? ? -11.10 4 1 VAL H 157 ? ? -11.65 5 1 MET H 180 ? ? -14.01 6 1 ARG H 187 ? ? -11.40 7 1 ARG H 206 ? ? -11.52 8 1 ILE H 238 ? ? -10.24 9 1 GLY H 246 ? ? 11.92 10 1 GLU I 58 ? ? -15.80 # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #