HEADER ANTIBIOTIC 06-SEP-00 1FQQ TITLE SOLUTION STRUCTURE OF HUMAN BETA-DEFENSIN-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-DEFENSIN-2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS DEFENSIN, SOLUTION STRUCTURE, ANTIBIOTIC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.V.SAWAI,H.P.JIA,L.LIU,V.ASEYEV,J.M.WIENCEK,P.B.MCCRAY JR.,T.GANZ, AUTHOR 2 W.R.KEARNEY,B.F.TACK REVDAT 4 24-OCT-18 1FQQ 1 SOURCE REMARK ATOM REVDAT 3 24-FEB-09 1FQQ 1 VERSN REVDAT 2 31-DEC-02 1FQQ 1 REMARK REVDAT 1 11-APR-01 1FQQ 0 JRNL AUTH M.V.SAWAI,H.P.JIA,L.LIU,V.ASEYEV,J.M.WIENCEK,P.B.MCCRAY JR., JRNL AUTH 2 T.GANZ,W.R.KEARNEY,B.F.TACK JRNL TITL THE NMR STRUCTURE OF HUMAN BETA-DEFENSIN-2 REVEALS A NOVEL JRNL TITL 2 ALPHA-HELICAL SEGMENT. JRNL REF BIOCHEMISTRY V. 40 3810 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11300761 JRNL DOI 10.1021/BI002519D REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5, DYANA 1.5 REMARK 3 AUTHORS : GUENTERT (DYANA), GUENTERT (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FQQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011828. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.7 REMARK 210 IONIC STRENGTH : 0.045 REMARK 210 PRESSURE : 1013 HPA REMARK 210 SAMPLE CONTENTS : 0.9MM HUMAN BETA-DEFENSIN-2; REMARK 210 45MM SODIUM PHOSPHATE BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY,DOF-COSY,TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 TARGET FUNCTION VALUE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 6 H LEU A 9 1.59 REMARK 500 OD2 ASP A 4 N THR A 7 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 2 114.59 -13.45 REMARK 500 1 VAL A 6 -72.88 -85.46 REMARK 500 1 THR A 7 -29.19 -38.06 REMARK 500 1 VAL A 18 -76.25 67.08 REMARK 500 1 ARG A 22 168.31 78.54 REMARK 500 1 GLN A 26 -59.03 -168.50 REMARK 500 1 ILE A 27 41.58 86.33 REMARK 500 1 CYS A 30 -56.25 -120.13 REMARK 500 1 THR A 35 161.91 -49.94 REMARK 500 2 ILE A 2 103.26 2.98 REMARK 500 2 VAL A 18 -99.35 171.77 REMARK 500 2 ARG A 22 172.28 65.02 REMARK 500 2 GLN A 26 -68.93 166.99 REMARK 500 2 ILE A 27 46.95 85.66 REMARK 500 2 CYS A 30 84.86 -156.23 REMARK 500 3 ILE A 2 112.71 -17.10 REMARK 500 3 SER A 11 44.63 152.77 REMARK 500 3 ALA A 13 167.45 161.64 REMARK 500 3 VAL A 18 178.99 77.29 REMARK 500 3 PHE A 19 169.36 -42.34 REMARK 500 3 ARG A 22 166.88 59.22 REMARK 500 3 ARG A 23 20.29 -77.42 REMARK 500 3 TYR A 24 -154.58 -58.80 REMARK 500 3 ILE A 27 23.88 -173.50 REMARK 500 3 THR A 29 -162.05 -128.12 REMARK 500 3 CYS A 30 -99.17 -140.51 REMARK 500 3 LEU A 32 170.87 -43.76 REMARK 500 4 ILE A 2 109.49 -8.00 REMARK 500 4 ASP A 4 -177.43 178.01 REMARK 500 4 VAL A 6 -71.14 -77.59 REMARK 500 4 VAL A 18 -100.90 173.55 REMARK 500 4 ARG A 22 174.27 64.31 REMARK 500 4 ARG A 23 12.01 -69.84 REMARK 500 4 GLN A 26 -137.49 171.08 REMARK 500 4 ILE A 27 34.70 162.97 REMARK 500 5 ILE A 2 111.57 -10.26 REMARK 500 5 VAL A 6 -74.35 -89.96 REMARK 500 5 THR A 7 -31.52 -36.24 REMARK 500 5 LYS A 10 -29.44 -39.41 REMARK 500 5 SER A 11 43.21 153.34 REMARK 500 5 ALA A 13 170.77 169.59 REMARK 500 5 VAL A 18 -148.61 36.94 REMARK 500 5 PHE A 19 162.21 -39.97 REMARK 500 5 ARG A 22 166.06 68.12 REMARK 500 5 ARG A 23 20.62 -77.07 REMARK 500 5 TYR A 24 -165.03 -71.31 REMARK 500 5 ILE A 27 21.87 -170.94 REMARK 500 5 CYS A 30 -96.73 -140.17 REMARK 500 5 LEU A 32 171.22 -46.10 REMARK 500 6 ILE A 2 102.05 -55.50 REMARK 500 REMARK 500 THIS ENTRY HAS 217 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1FQQ A 1 41 UNP O15263 BD02_HUMAN 24 64 SEQRES 1 A 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 A 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 A 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 A 41 LYS PRO HELIX 1 1 THR A 7 LYS A 10 1 4 SHEET 1 A 3 ILE A 14 HIS A 16 0 SHEET 2 A 3 LYS A 36 LYS A 39 -1 O LYS A 36 N HIS A 16 SHEET 3 A 3 LYS A 25 GLY A 28 -1 N LYS A 25 O LYS A 39 SSBOND 1 CYS A 8 CYS A 37 1555 1555 1.84 SSBOND 2 CYS A 15 CYS A 30 1555 1555 2.16 SSBOND 3 CYS A 20 CYS A 38 1555 1555 2.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1