HEADER METAL BINDING PROTEIN 07-SEP-00 1FRW TITLE STRUCTURE OF E. COLI MOBA WITH BOUND GTP AND MANGANESE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MOBA; COMPND 5 SYNONYM: MOBA, PROTEIN FA, PROTEIN AR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PCT800A KEYWDS MOLYBDENUM COFACTOR (MOCO), MOCO BIOSYNTHESIS, MOLYBDOPTERIN (MPT), KEYWDS 2 MOLYBDOPTERIN GUANINE DINUCLEOTIDE (MGD), METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.LAKE,C.A.TEMPLE,K.V.RAJAGOPALAN,H.SCHINDELIN REVDAT 4 07-FEB-24 1FRW 1 REMARK LINK REVDAT 3 13-JUL-11 1FRW 1 VERSN REVDAT 2 24-FEB-09 1FRW 1 VERSN REVDAT 1 10-JAN-01 1FRW 0 JRNL AUTH M.W.LAKE,C.A.TEMPLE,K.V.RAJAGOPALAN,H.SCHINDELIN JRNL TITL THE CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI MOBA PROTEIN JRNL TITL 2 PROVIDES INSIGHT INTO MOLYBDOPTERIN GUANINE DINUCLEOTIDE JRNL TITL 3 BIOSYNTHESIS. JRNL REF J.BIOL.CHEM. V. 275 40211 2000 JRNL REFN ISSN 0021-9258 JRNL PMID 10978347 JRNL DOI 10.1074/JBC.M007406200 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 24531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1446 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : -0.30000 REMARK 3 B33 (A**2) : 0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.022 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : 2.240 ; 1.972 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.009 ; 0.020 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.123 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.305 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.695 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.321 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.120 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1FRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 95.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26350 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.44100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, CACODYLATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 62.19350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 33.69950 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 62.19350 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 33.69950 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 62.19350 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 33.69950 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 62.19350 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 33.69950 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 62.19350 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 33.69950 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 62.19350 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 33.69950 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 62.19350 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 33.69950 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 62.19350 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 62.19350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 33.69950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS AN OCTAMER CONSTRUCTED FROM REMARK 300 CHAIN A. THE OCTAMER HAS 42 SYMMETRY AND IS ENTIRELY GENERATED BY REMARK 300 CRYSTALLOGRAPHIC SYMMETRY OPERATIONS IN THE I422 TETRAGONAL SPACE REMARK 300 GROUP. HIS 49 FROM 2 DIFFERENT MONOMERS ALONG WITH 2 ACETATE REMARK 300 LIGANDS COORDINATE A ZINC ATOM AT THE DIMER INTERFACE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 24370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -656.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 196 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 17 REMARK 465 ARG A 18 REMARK 465 ARG A 19 REMARK 465 MET A 20 REMARK 465 GLY A 21 REMARK 465 GLY A 22 REMARK 465 LYS A 193 REMARK 465 ARG A 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 29 OE1 GLU A 29 16555 1.79 REMARK 500 O HOH A 256 O HOH A 256 7556 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 14 N - CA - C ANGL. DEV. = 27.4 DEGREES REMARK 500 GLY A 14 N - CA - C ANGL. DEV. = 23.6 DEGREES REMARK 500 GLY A 15 N - CA - C ANGL. DEV. = 16.1 DEGREES REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 71 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 117 NE - CZ - NH1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ARG A 117 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ASP A 127 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 36.80 72.38 REMARK 500 LYS A 175 107.54 -47.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 13 GLY A 14 -147.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 196 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 49 ND1 REMARK 620 2 HIS A 49 ND1 113.7 REMARK 620 3 ACT A 195 OXT 95.4 104.3 REMARK 620 4 ACT A 195 OXT 95.4 104.3 0.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 197 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD2 REMARK 620 2 GTP A 198 O2G 167.0 REMARK 620 3 GTP A 198 O2B 89.7 98.4 REMARK 620 4 HOH A 267 O 89.7 102.8 66.5 REMARK 620 5 HOH A 364 O 90.5 77.2 110.2 176.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 198 DBREF 1FRW A 1 194 UNP P32173 MOBA_ECOLI 1 194 SEQRES 1 A 194 MET ASN LEU MET THR THR ILE THR GLY VAL VAL LEU ALA SEQRES 2 A 194 GLY GLY LYS ALA ARG ARG MET GLY GLY VAL ASP LYS GLY SEQRES 3 A 194 LEU LEU GLU LEU ASN GLY LYS PRO LEU TRP GLN HIS VAL SEQRES 4 A 194 ALA ASP ALA LEU MET THR GLN LEU SER HIS VAL VAL VAL SEQRES 5 A 194 ASN ALA ASN ARG HIS GLN GLU ILE TYR GLN ALA SER GLY SEQRES 6 A 194 LEU LYS VAL ILE GLU ASP SER LEU ALA ASP TYR PRO GLY SEQRES 7 A 194 PRO LEU ALA GLY MET LEU SER VAL MET GLN GLN GLU ALA SEQRES 8 A 194 GLY GLU TRP PHE LEU PHE CYS PRO CYS ASP THR PRO TYR SEQRES 9 A 194 ILE PRO PRO ASP LEU ALA ALA ARG LEU ASN HIS GLN ARG SEQRES 10 A 194 LYS ASP ALA PRO VAL VAL TRP VAL HIS ASP GLY GLU ARG SEQRES 11 A 194 ASP HIS PRO THR ILE ALA LEU VAL ASN ARG ALA ILE GLU SEQRES 12 A 194 PRO LEU LEU LEU GLU TYR LEU GLN ALA GLY GLU ARG ARG SEQRES 13 A 194 VAL MET VAL PHE MET ARG LEU ALA GLY GLY HIS ALA VAL SEQRES 14 A 194 ASP PHE SER ASP HIS LYS ASP ALA PHE VAL ASN VAL ASN SEQRES 15 A 194 THR PRO GLU GLU LEU ALA ARG TRP GLN GLU LYS ARG HET ACT A 195 4 HET ZN A 196 1 HET MN A 197 1 HET GTP A 198 32 HETNAM ACT ACETATE ION HETNAM ZN ZINC ION HETNAM MN MANGANESE (II) ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 ZN ZN 2+ FORMUL 4 MN MN 2+ FORMUL 5 GTP C10 H16 N5 O14 P3 FORMUL 6 HOH *168(H2 O) HELIX 1 1 ASN A 2 THR A 5 5 4 HELIX 2 2 ASP A 24 LEU A 27 5 4 HELIX 3 3 LEU A 35 LEU A 47 1 13 HELIX 4 4 HIS A 57 SER A 64 1 8 HELIX 5 5 PRO A 77 GLU A 90 1 14 HELIX 6 6 ASP A 108 GLN A 116 1 9 HELIX 7 7 ILE A 142 ALA A 152 1 11 HELIX 8 8 ARG A 156 ALA A 164 1 9 HELIX 9 9 THR A 183 GLN A 191 1 9 SHEET 1 A 7 LYS A 67 ILE A 69 0 SHEET 2 A 7 VAL A 50 ASN A 53 1 O VAL A 50 N LYS A 67 SHEET 3 A 7 ILE A 7 LEU A 12 1 O GLY A 9 N VAL A 51 SHEET 4 A 7 TRP A 94 PRO A 99 1 O TRP A 94 N THR A 8 SHEET 5 A 7 ASP A 131 ASN A 139 -1 O ALA A 136 N PHE A 97 SHEET 6 A 7 VAL A 122 HIS A 126 -1 O VAL A 123 N LEU A 137 SHEET 7 A 7 HIS A 167 ASP A 170 1 O HIS A 167 N TRP A 124 SHEET 1 B 2 GLU A 29 LEU A 30 0 SHEET 2 B 2 LYS A 33 PRO A 34 -1 O LYS A 33 N LEU A 30 LINK ND1 HIS A 49 ZN ZN A 196 1555 1555 2.15 LINK ND1 HIS A 49 ZN ZN A 196 7555 1555 2.07 LINK OD2 ASP A 101 MN MN A 197 1555 1555 2.05 LINK OXT ACT A 195 ZN ZN A 196 1555 1555 2.10 LINK OXT ACT A 195 ZN ZN A 196 1555 7555 1.88 LINK MN MN A 197 O2G GTP A 198 1555 1555 1.93 LINK MN MN A 197 O2B GTP A 198 1555 1555 1.87 LINK MN MN A 197 O HOH A 267 1555 1555 2.32 LINK MN MN A 197 O HOH A 364 1555 1555 2.49 SITE 1 AC1 8 SER A 48 HIS A 49 VAL A 50 LEU A 66 SITE 2 AC1 8 LYS A 67 ZN A 196 HOH A 199 HOH A 203 SITE 1 AC2 2 HIS A 49 ACT A 195 SITE 1 AC3 4 ASP A 101 GTP A 198 HOH A 267 HOH A 364 SITE 1 AC4 18 LEU A 12 ALA A 13 GLY A 14 GLY A 15 SITE 2 AC4 18 LYS A 16 LYS A 25 ASN A 53 ASP A 71 SITE 3 AC4 18 GLY A 78 PRO A 79 GLY A 82 PRO A 99 SITE 4 AC4 18 ASP A 101 MN A 197 HOH A 223 HOH A 267 SITE 5 AC4 18 HOH A 349 HOH A 364 CRYST1 124.387 124.387 67.399 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008039 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014837 0.00000