HEADER ANTIMICROBIAL PROTEIN 07-SEP-00 1FRY TITLE THE SOLUTION STRUCTURE OF SHEEP MYELOID ANTIMICROBIAL PEPTIDE, TITLE 2 RESIDUES 1-29 (SMAP29) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYELOID ANTIMICROBIAL PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SMAP29, SMAP-29 GENE PRODUCT; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN SHEEP. NMR SAMPLES SOURCE 4 WERE SYNTHESIZED USING FMOC CHEMISTRY KEYWDS RANDOM-ORDERED COIL-LOOP, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR B.F.TACK,M.V.SAWAI,W.R.KEARNEY,A.D.ROBERTSON,M.A.SHERMAN,W.WANG, AUTHOR 2 T.HONG,L.M.BOO,H.WU,A.J.WARING,R.I.LEHRER REVDAT 4 22-MAY-24 1FRY 1 REMARK REVDAT 3 23-FEB-22 1FRY 1 REMARK REVDAT 2 24-FEB-09 1FRY 1 VERSN REVDAT 1 08-MAR-02 1FRY 0 JRNL AUTH B.F.TACK,M.V.SAWAI,W.R.KEARNEY,A.D.ROBERTSON,M.A.SHERMAN, JRNL AUTH 2 W.WANG,T.HONG,L.M.BOO,H.WU,A.J.WARING,R.I.LEHRER JRNL TITL SMAP-29 HAS TWO LPS-BINDING SITES AND A CENTRAL HINGE. JRNL REF EUR.J.BIOCHEM. V. 269 1181 2002 JRNL REFN ISSN 0014-2956 JRNL PMID 11856344 JRNL DOI 10.1046/J.0014-2956.2002.02751.X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5, VNMR 6.1B REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE BASED ON 217 NOE CONTSTRAINTS REMARK 3 AND 8 HA-NH COUPLING CONSTANTS REMARK 4 REMARK 4 1FRY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011848. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.94 REMARK 210 IONIC STRENGTH : CA. 50MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1MM SMAP29; 50MM PHOSPHATE REMARK 210 BUFFER, PH 5.94 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; DQF-COSY; TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 4.3B, VNMR 6.1B REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS,STRUCTURES WITH THE REMARK 210 LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1,21 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 4 39.66 -159.01 REMARK 500 1 ARG A 5 -32.48 175.77 REMARK 500 1 LYS A 9 -49.07 -145.31 REMARK 500 1 ALA A 11 -125.69 -86.08 REMARK 500 1 HIS A 12 112.22 47.25 REMARK 500 1 VAL A 14 -45.78 -134.75 REMARK 500 1 TYR A 17 -71.10 -84.72 REMARK 500 1 PRO A 19 -90.43 -74.96 REMARK 500 1 THR A 20 -26.23 173.61 REMARK 500 1 VAL A 21 -171.38 -50.55 REMARK 500 1 LEU A 22 -79.09 98.65 REMARK 500 1 ILE A 24 -44.45 -131.44 REMARK 500 1 ARG A 26 17.59 44.49 REMARK 500 2 ARG A 4 36.35 -176.52 REMARK 500 2 ARG A 5 -35.96 -176.60 REMARK 500 2 ARG A 8 25.45 -147.38 REMARK 500 2 LYS A 9 -48.98 -133.07 REMARK 500 2 ALA A 11 -126.51 -86.40 REMARK 500 2 HIS A 12 112.62 47.27 REMARK 500 2 VAL A 14 -45.77 -131.47 REMARK 500 2 TYR A 17 -75.77 -86.65 REMARK 500 2 THR A 20 -50.70 -29.71 REMARK 500 2 VAL A 21 -172.54 -51.43 REMARK 500 2 LEU A 22 -76.47 97.86 REMARK 500 2 ILE A 24 -43.62 -132.36 REMARK 500 2 ARG A 26 17.36 44.73 REMARK 500 3 LEU A 3 -94.83 -137.06 REMARK 500 3 ARG A 4 117.41 174.47 REMARK 500 3 ARG A 5 -26.69 165.02 REMARK 500 3 ALA A 11 -126.22 -86.54 REMARK 500 3 HIS A 12 111.89 46.77 REMARK 500 3 VAL A 14 -45.18 -133.21 REMARK 500 3 TYR A 17 -75.13 -88.73 REMARK 500 3 PRO A 19 -91.19 -75.02 REMARK 500 3 THR A 20 -59.29 37.28 REMARK 500 3 VAL A 21 -172.04 -50.47 REMARK 500 3 LEU A 22 -78.47 98.06 REMARK 500 3 ILE A 24 -44.25 -131.24 REMARK 500 3 ARG A 26 17.65 44.62 REMARK 500 4 ARG A 4 -60.13 -158.62 REMARK 500 4 ARG A 5 -29.23 170.24 REMARK 500 4 LYS A 9 -54.03 -137.50 REMARK 500 4 ALA A 11 -127.84 -84.91 REMARK 500 4 HIS A 12 112.20 47.61 REMARK 500 4 VAL A 14 -45.68 -130.97 REMARK 500 4 TYR A 17 -75.87 -86.48 REMARK 500 4 THR A 20 80.19 -41.02 REMARK 500 4 VAL A 21 -172.37 -50.01 REMARK 500 4 LEU A 22 -77.64 96.71 REMARK 500 4 ILE A 24 -44.69 -130.48 REMARK 500 REMARK 500 THIS ENTRY HAS 449 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1FRY A 1 29 UNP P49928 SC51_SHEEP 132 160 SEQRES 1 A 29 ARG GLY LEU ARG ARG LEU GLY ARG LYS ILE ALA HIS GLY SEQRES 2 A 29 VAL LYS LYS TYR GLY PRO THR VAL LEU ARG ILE ILE ARG SEQRES 3 A 29 ILE ALA GLY CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1