data_1FY9 # _entry.id 1FY9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FY9 pdb_00001fy9 10.2210/pdb1fy9/pdb RCSB RCSB012008 ? ? WWPDB D_1000012008 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1FYA '1FYA contains the apical domain of 60 Kd Chaperonin (A212E/A223T/M233L/I305L/E308K/N326T).' unspecified PDB 1kid '1KID contains the apical domain of wild-type 60 Kd Chaperonin.' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FY9 _pdbx_database_status.recvd_initial_deposition_date 2000-09-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, Q.' 1 'Buckle, A.M.' 2 'Fersht, A.R.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Stabilization of GroEL minichaperones by core and surface mutations.' J.Mol.Biol. 298 917 926 2000 JMOBAK UK 0022-2836 0070 ? 10801358 10.1006/jmbi.2000.3716 1 'Design of Highly Stable Functional GroEL Minichaperones' 'Protein Sci.' 8 2186 2193 1999 PRCIEI US 0961-8368 0795 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Q.' 1 ? primary 'Buckle, A.M.' 2 ? primary 'Fersht, A.R.' 3 ? 1 'Wang, Q.' 4 ? 1 'Buckle, A.M.' 5 ? 1 'Foster, N.W.' 6 ? 1 'Johnson, C.M.' 7 ? 1 'Fersht, A.R.' 8 ? # _cell.entry_id 1FY9 _cell.length_a 75.910 _cell.length_b 84.520 _cell.length_c 35.280 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FY9 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '60 KD CHAPERONIN' 20854.031 1 ? A212E/A223V/M233L/I305L/E308K/N326T 'APICAL DOMAIN (RESIDUES 191-376)' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLVPRGSEGMQFDRGYLSPYFINKPETGEVELESPFILLVDKKISNIRELLPVLEAVAKAGKPLLIIAEDVEGEALATLV VNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEELGMKLEKATLEDLGQAKRVVITKDTTTIIDGVGEEAAIQ GRVAQIRQQIEEATSDYDREKLQERVAKLAGGV ; _entity_poly.pdbx_seq_one_letter_code_can ;GLVPRGSEGMQFDRGYLSPYFINKPETGEVELESPFILLVDKKISNIRELLPVLEAVAKAGKPLLIIAEDVEGEALATLV VNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEELGMKLEKATLEDLGQAKRVVITKDTTTIIDGVGEEAAIQ GRVAQIRQQIEEATSDYDREKLQERVAKLAGGV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 VAL n 1 4 PRO n 1 5 ARG n 1 6 GLY n 1 7 SER n 1 8 GLU n 1 9 GLY n 1 10 MET n 1 11 GLN n 1 12 PHE n 1 13 ASP n 1 14 ARG n 1 15 GLY n 1 16 TYR n 1 17 LEU n 1 18 SER n 1 19 PRO n 1 20 TYR n 1 21 PHE n 1 22 ILE n 1 23 ASN n 1 24 LYS n 1 25 PRO n 1 26 GLU n 1 27 THR n 1 28 GLY n 1 29 GLU n 1 30 VAL n 1 31 GLU n 1 32 LEU n 1 33 GLU n 1 34 SER n 1 35 PRO n 1 36 PHE n 1 37 ILE n 1 38 LEU n 1 39 LEU n 1 40 VAL n 1 41 ASP n 1 42 LYS n 1 43 LYS n 1 44 ILE n 1 45 SER n 1 46 ASN n 1 47 ILE n 1 48 ARG n 1 49 GLU n 1 50 LEU n 1 51 LEU n 1 52 PRO n 1 53 VAL n 1 54 LEU n 1 55 GLU n 1 56 ALA n 1 57 VAL n 1 58 ALA n 1 59 LYS n 1 60 ALA n 1 61 GLY n 1 62 LYS n 1 63 PRO n 1 64 LEU n 1 65 LEU n 1 66 ILE n 1 67 ILE n 1 68 ALA n 1 69 GLU n 1 70 ASP n 1 71 VAL n 1 72 GLU n 1 73 GLY n 1 74 GLU n 1 75 ALA n 1 76 LEU n 1 77 ALA n 1 78 THR n 1 79 LEU n 1 80 VAL n 1 81 VAL n 1 82 ASN n 1 83 THR n 1 84 MET n 1 85 ARG n 1 86 GLY n 1 87 ILE n 1 88 VAL n 1 89 LYS n 1 90 VAL n 1 91 ALA n 1 92 ALA n 1 93 VAL n 1 94 LYS n 1 95 ALA n 1 96 PRO n 1 97 GLY n 1 98 PHE n 1 99 GLY n 1 100 ASP n 1 101 ARG n 1 102 ARG n 1 103 LYS n 1 104 ALA n 1 105 MET n 1 106 LEU n 1 107 GLN n 1 108 ASP n 1 109 ILE n 1 110 ALA n 1 111 THR n 1 112 LEU n 1 113 THR n 1 114 GLY n 1 115 GLY n 1 116 THR n 1 117 VAL n 1 118 ILE n 1 119 SER n 1 120 GLU n 1 121 GLU n 1 122 LEU n 1 123 GLY n 1 124 MET n 1 125 LYS n 1 126 LEU n 1 127 GLU n 1 128 LYS n 1 129 ALA n 1 130 THR n 1 131 LEU n 1 132 GLU n 1 133 ASP n 1 134 LEU n 1 135 GLY n 1 136 GLN n 1 137 ALA n 1 138 LYS n 1 139 ARG n 1 140 VAL n 1 141 VAL n 1 142 ILE n 1 143 THR n 1 144 LYS n 1 145 ASP n 1 146 THR n 1 147 THR n 1 148 THR n 1 149 ILE n 1 150 ILE n 1 151 ASP n 1 152 GLY n 1 153 VAL n 1 154 GLY n 1 155 GLU n 1 156 GLU n 1 157 ALA n 1 158 ALA n 1 159 ILE n 1 160 GLN n 1 161 GLY n 1 162 ARG n 1 163 VAL n 1 164 ALA n 1 165 GLN n 1 166 ILE n 1 167 ARG n 1 168 GLN n 1 169 GLN n 1 170 ILE n 1 171 GLU n 1 172 GLU n 1 173 ALA n 1 174 THR n 1 175 SER n 1 176 ASP n 1 177 TYR n 1 178 ASP n 1 179 ARG n 1 180 GLU n 1 181 LYS n 1 182 LEU n 1 183 GLN n 1 184 GLU n 1 185 ARG n 1 186 VAL n 1 187 ALA n 1 188 LYS n 1 189 LEU n 1 190 ALA n 1 191 GLY n 1 192 GLY n 1 193 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PRSET A' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code CH60_ECOLI _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P0A6F5 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FY9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A6F5 _struct_ref_seq.db_align_beg 184 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 376 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 184 _struct_ref_seq.pdbx_auth_seq_align_end 376 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1FY9 GLY A 1 ? UNP P0A6F5 GLN 184 'cloning artifact' 184 1 1 1FY9 LEU A 2 ? UNP P0A6F5 ASP 185 'cloning artifact' 185 2 1 1FY9 VAL A 3 ? UNP P0A6F5 GLU 186 'cloning artifact' 186 3 1 1FY9 PRO A 4 ? UNP P0A6F5 LEU 187 'cloning artifact' 187 4 1 1FY9 ARG A 5 ? UNP P0A6F5 ASP 188 'cloning artifact' 188 5 1 1FY9 GLY A 6 ? UNP P0A6F5 VAL 189 'cloning artifact' 189 6 1 1FY9 SER A 7 ? UNP P0A6F5 VAL 190 'cloning artifact' 190 7 1 1FY9 GLU A 29 ? UNP P0A6F5 ALA 212 'engineered mutation' 212 8 1 1FY9 VAL A 40 ? UNP P0A6F5 ALA 223 'engineered mutation' 223 9 1 1FY9 LEU A 50 ? UNP P0A6F5 MET 233 'engineered mutation' 233 10 1 1FY9 LEU A 122 ? UNP P0A6F5 ILE 305 'engineered mutation' 305 11 1 1FY9 LYS A 125 ? UNP P0A6F5 GLU 308 'engineered mutation' 308 12 1 1FY9 THR A 143 ? UNP P0A6F5 ASN 326 'engineered mutation' 326 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FY9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.71 _exptl_crystal.density_percent_sol 43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_details '0.75-0.9M POTASSIUM TARTRATE, 50MM MES SODIUM, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-11-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9630 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LURE BEAMLINE DW32' _diffrn_source.pdbx_synchrotron_site LURE _diffrn_source.pdbx_synchrotron_beamline DW32 _diffrn_source.pdbx_wavelength 0.9630 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FY9 _reflns.observed_criterion_sigma_I 3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.000 _reflns.d_resolution_high 2.200 _reflns.number_obs 11590 _reflns.number_all 11606 _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs 0.1280000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.5000 _reflns.B_iso_Wilson_estimate 24.90 _reflns.pdbx_redundancy 11.30 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.21 _reflns_shell.d_res_low 2.33 _reflns_shell.percent_possible_all 90.6 _reflns_shell.Rmerge_I_obs 0.4700000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.900 _reflns_shell.pdbx_redundancy 3.60 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1FY9 _refine.ls_number_reflns_obs 11590 _refine.ls_number_reflns_all 11606 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.0 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.0 _refine.ls_R_factor_obs 0.2650000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2570000 _refine.ls_R_factor_R_free 0.2920000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 600 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 32.90 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'GROEL(191-376) (PDB ID: 1KID)' _refine.pdbx_method_to_determine_struct MR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.32 _refine.pdbx_overall_ESU_R_Free 0.24 _refine.overall_SU_ML 0.20 _refine.overall_SU_B 8.034 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1380 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1441 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 38.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.006 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.024 0.040 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.019 0.050 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.269 3.000 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 2.014 5.000 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 3.476 6.000 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 4.753 8.000 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.0162 ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.087 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.184 0.300 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.250 0.300 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd 0.164 0.300 ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.2 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 16.4 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor 29.6 20.0 ? ? 'X-RAY DIFFRACTION' ? p_special_tor 0.0 15.0 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1FY9 _struct.title 'CRYSTAL STRUCTURE OF THE HEXA-SUBSTITUTED MUTANT OF THE MOLECULAR CHAPERONIN GROEL APICAL DOMAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FY9 _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text 'Chaperone, Stabilizing mutant' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? ILE A 22 ? SER A 201 ILE A 205 5 ? 5 HELX_P HELX_P2 2 ASN A 46 ? GLY A 61 ? ASN A 229 GLY A 244 1 ? 16 HELX_P HELX_P3 3 GLU A 72 ? ARG A 85 ? GLU A 255 ARG A 268 1 ? 14 HELX_P HELX_P4 4 PHE A 98 ? GLY A 114 ? PHE A 281 GLY A 297 1 ? 17 HELX_P HELX_P5 5 LYS A 125 ? ALA A 129 ? LYS A 308 ALA A 312 5 ? 5 HELX_P HELX_P6 6 GLU A 155 ? GLU A 172 ? GLU A 338 GLU A 355 1 ? 18 HELX_P HELX_P7 7 SER A 175 ? GLY A 192 ? SER A 358 GLY A 375 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 10 ? PHE A 12 ? MET A 193 PHE A 195 A 2 THR A 147 ? GLY A 152 ? THR A 330 GLY A 335 A 3 GLY A 135 ? ILE A 142 ? GLY A 318 ILE A 325 A 4 VAL A 30 ? GLU A 33 ? VAL A 213 GLU A 216 B 1 MET A 10 ? PHE A 12 ? MET A 193 PHE A 195 B 2 THR A 147 ? GLY A 152 ? THR A 330 GLY A 335 B 3 GLY A 135 ? ILE A 142 ? GLY A 318 ILE A 325 B 4 PHE A 36 ? VAL A 40 ? PHE A 219 VAL A 223 B 5 LEU A 64 ? ALA A 68 ? LEU A 247 ALA A 251 B 6 VAL A 90 ? LYS A 94 ? VAL A 273 LYS A 277 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 12 ? O PHE A 195 N THR A 147 ? N THR A 330 A 2 3 O ILE A 150 ? O ILE A 333 N LYS A 138 ? N LYS A 321 A 3 4 O ILE A 142 ? O ILE A 325 N VAL A 30 ? N VAL A 213 B 1 2 O PHE A 12 ? O PHE A 195 N THR A 147 ? N THR A 330 B 2 3 O ILE A 150 ? O ILE A 333 N LYS A 138 ? N LYS A 321 B 3 4 N GLY A 135 ? N GLY A 318 O ILE A 37 ? O ILE A 220 B 4 5 N LEU A 38 ? N LEU A 221 O LEU A 65 ? O LEU A 248 B 5 6 O LEU A 64 ? O LEU A 247 N ALA A 91 ? N ALA A 274 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 111 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 111' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH C . ? HOH A 13 . ? 1_555 ? 2 AC1 4 ASP A 13 ? ASP A 196 . ? 1_555 ? 3 AC1 4 LYS A 181 ? LYS A 364 . ? 1_555 ? 4 AC1 4 GLU A 184 ? GLU A 367 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FY9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FY9 _atom_sites.fract_transf_matrix[1][1] 0.01317 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01183 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02834 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 184 184 GLY GLY A . n A 1 2 LEU 2 185 185 LEU LEU A . n A 1 3 VAL 3 186 186 VAL VAL A . n A 1 4 PRO 4 187 187 PRO PRO A . n A 1 5 ARG 5 188 188 ARG ARG A . n A 1 6 GLY 6 189 189 GLY GLY A . n A 1 7 SER 7 190 190 SER SER A . n A 1 8 GLU 8 191 191 GLU GLU A . n A 1 9 GLY 9 192 192 GLY GLY A . n A 1 10 MET 10 193 193 MET MET A . n A 1 11 GLN 11 194 194 GLN GLN A . n A 1 12 PHE 12 195 195 PHE PHE A . n A 1 13 ASP 13 196 196 ASP ASP A . n A 1 14 ARG 14 197 197 ARG ARG A . n A 1 15 GLY 15 198 198 GLY GLY A . n A 1 16 TYR 16 199 199 TYR TYR A . n A 1 17 LEU 17 200 200 LEU LEU A . n A 1 18 SER 18 201 201 SER SER A . n A 1 19 PRO 19 202 202 PRO PRO A . n A 1 20 TYR 20 203 203 TYR TYR A . n A 1 21 PHE 21 204 204 PHE PHE A . n A 1 22 ILE 22 205 205 ILE ILE A . n A 1 23 ASN 23 206 206 ASN ASN A . n A 1 24 LYS 24 207 207 LYS LYS A . n A 1 25 PRO 25 208 208 PRO PRO A . n A 1 26 GLU 26 209 209 GLU GLU A . n A 1 27 THR 27 210 210 THR THR A . n A 1 28 GLY 28 211 211 GLY GLY A . n A 1 29 GLU 29 212 212 GLU GLU A . n A 1 30 VAL 30 213 213 VAL VAL A . n A 1 31 GLU 31 214 214 GLU GLU A . n A 1 32 LEU 32 215 215 LEU LEU A . n A 1 33 GLU 33 216 216 GLU GLU A . n A 1 34 SER 34 217 217 SER SER A . n A 1 35 PRO 35 218 218 PRO PRO A . n A 1 36 PHE 36 219 219 PHE PHE A . n A 1 37 ILE 37 220 220 ILE ILE A . n A 1 38 LEU 38 221 221 LEU LEU A . n A 1 39 LEU 39 222 222 LEU LEU A . n A 1 40 VAL 40 223 223 VAL VAL A . n A 1 41 ASP 41 224 224 ASP ASP A . n A 1 42 LYS 42 225 225 LYS LYS A . n A 1 43 LYS 43 226 226 LYS LYS A . n A 1 44 ILE 44 227 227 ILE ILE A . n A 1 45 SER 45 228 228 SER SER A . n A 1 46 ASN 46 229 229 ASN ASN A . n A 1 47 ILE 47 230 230 ILE ILE A . n A 1 48 ARG 48 231 231 ARG ARG A . n A 1 49 GLU 49 232 232 GLU GLU A . n A 1 50 LEU 50 233 233 LEU LEU A . n A 1 51 LEU 51 234 234 LEU LEU A . n A 1 52 PRO 52 235 235 PRO PRO A . n A 1 53 VAL 53 236 236 VAL VAL A . n A 1 54 LEU 54 237 237 LEU LEU A . n A 1 55 GLU 55 238 238 GLU GLU A . n A 1 56 ALA 56 239 239 ALA ALA A . n A 1 57 VAL 57 240 240 VAL VAL A . n A 1 58 ALA 58 241 241 ALA ALA A . n A 1 59 LYS 59 242 242 LYS LYS A . n A 1 60 ALA 60 243 243 ALA ALA A . n A 1 61 GLY 61 244 244 GLY GLY A . n A 1 62 LYS 62 245 245 LYS LYS A . n A 1 63 PRO 63 246 246 PRO PRO A . n A 1 64 LEU 64 247 247 LEU LEU A . n A 1 65 LEU 65 248 248 LEU LEU A . n A 1 66 ILE 66 249 249 ILE ILE A . n A 1 67 ILE 67 250 250 ILE ILE A . n A 1 68 ALA 68 251 251 ALA ALA A . n A 1 69 GLU 69 252 252 GLU GLU A . n A 1 70 ASP 70 253 253 ASP ASP A . n A 1 71 VAL 71 254 254 VAL VAL A . n A 1 72 GLU 72 255 255 GLU GLU A . n A 1 73 GLY 73 256 256 GLY GLY A . n A 1 74 GLU 74 257 257 GLU GLU A . n A 1 75 ALA 75 258 258 ALA ALA A . n A 1 76 LEU 76 259 259 LEU LEU A . n A 1 77 ALA 77 260 260 ALA ALA A . n A 1 78 THR 78 261 261 THR THR A . n A 1 79 LEU 79 262 262 LEU LEU A . n A 1 80 VAL 80 263 263 VAL VAL A . n A 1 81 VAL 81 264 264 VAL VAL A . n A 1 82 ASN 82 265 265 ASN ASN A . n A 1 83 THR 83 266 266 THR THR A . n A 1 84 MET 84 267 267 MET MET A . n A 1 85 ARG 85 268 268 ARG ARG A . n A 1 86 GLY 86 269 269 GLY GLY A . n A 1 87 ILE 87 270 270 ILE ILE A . n A 1 88 VAL 88 271 271 VAL VAL A . n A 1 89 LYS 89 272 272 LYS LYS A . n A 1 90 VAL 90 273 273 VAL VAL A . n A 1 91 ALA 91 274 274 ALA ALA A . n A 1 92 ALA 92 275 275 ALA ALA A . n A 1 93 VAL 93 276 276 VAL VAL A . n A 1 94 LYS 94 277 277 LYS LYS A . n A 1 95 ALA 95 278 278 ALA ALA A . n A 1 96 PRO 96 279 279 PRO PRO A . n A 1 97 GLY 97 280 280 GLY GLY A . n A 1 98 PHE 98 281 281 PHE PHE A . n A 1 99 GLY 99 282 282 GLY GLY A . n A 1 100 ASP 100 283 283 ASP ASP A . n A 1 101 ARG 101 284 284 ARG ARG A . n A 1 102 ARG 102 285 285 ARG ARG A . n A 1 103 LYS 103 286 286 LYS LYS A . n A 1 104 ALA 104 287 287 ALA ALA A . n A 1 105 MET 105 288 288 MET MET A . n A 1 106 LEU 106 289 289 LEU LEU A . n A 1 107 GLN 107 290 290 GLN GLN A . n A 1 108 ASP 108 291 291 ASP ASP A . n A 1 109 ILE 109 292 292 ILE ILE A . n A 1 110 ALA 110 293 293 ALA ALA A . n A 1 111 THR 111 294 294 THR THR A . n A 1 112 LEU 112 295 295 LEU LEU A . n A 1 113 THR 113 296 296 THR THR A . n A 1 114 GLY 114 297 297 GLY GLY A . n A 1 115 GLY 115 298 298 GLY GLY A . n A 1 116 THR 116 299 299 THR THR A . n A 1 117 VAL 117 300 300 VAL VAL A . n A 1 118 ILE 118 301 301 ILE ILE A . n A 1 119 SER 119 302 302 SER SER A . n A 1 120 GLU 120 303 303 GLU GLU A . n A 1 121 GLU 121 304 304 GLU GLU A . n A 1 122 LEU 122 305 305 LEU LEU A . n A 1 123 GLY 123 306 306 GLY GLY A . n A 1 124 MET 124 307 307 MET MET A . n A 1 125 LYS 125 308 308 LYS LYS A . n A 1 126 LEU 126 309 309 LEU LEU A . n A 1 127 GLU 127 310 310 GLU GLU A . n A 1 128 LYS 128 311 311 LYS LYS A . n A 1 129 ALA 129 312 312 ALA ALA A . n A 1 130 THR 130 313 313 THR THR A . n A 1 131 LEU 131 314 314 LEU LEU A . n A 1 132 GLU 132 315 315 GLU GLU A . n A 1 133 ASP 133 316 316 ASP ASP A . n A 1 134 LEU 134 317 317 LEU LEU A . n A 1 135 GLY 135 318 318 GLY GLY A . n A 1 136 GLN 136 319 319 GLN GLN A . n A 1 137 ALA 137 320 320 ALA ALA A . n A 1 138 LYS 138 321 321 LYS LYS A . n A 1 139 ARG 139 322 322 ARG ARG A . n A 1 140 VAL 140 323 323 VAL VAL A . n A 1 141 VAL 141 324 324 VAL VAL A . n A 1 142 ILE 142 325 325 ILE ILE A . n A 1 143 THR 143 326 326 THR THR A . n A 1 144 LYS 144 327 327 LYS LYS A . n A 1 145 ASP 145 328 328 ASP ASP A . n A 1 146 THR 146 329 329 THR THR A . n A 1 147 THR 147 330 330 THR THR A . n A 1 148 THR 148 331 331 THR THR A . n A 1 149 ILE 149 332 332 ILE ILE A . n A 1 150 ILE 150 333 333 ILE ILE A . n A 1 151 ASP 151 334 334 ASP ASP A . n A 1 152 GLY 152 335 335 GLY GLY A . n A 1 153 VAL 153 336 336 VAL VAL A . n A 1 154 GLY 154 337 337 GLY GLY A . n A 1 155 GLU 155 338 338 GLU GLU A . n A 1 156 GLU 156 339 339 GLU GLU A . n A 1 157 ALA 157 340 340 ALA ALA A . n A 1 158 ALA 158 341 341 ALA ALA A . n A 1 159 ILE 159 342 342 ILE ILE A . n A 1 160 GLN 160 343 343 GLN GLN A . n A 1 161 GLY 161 344 344 GLY GLY A . n A 1 162 ARG 162 345 345 ARG ARG A . n A 1 163 VAL 163 346 346 VAL VAL A . n A 1 164 ALA 164 347 347 ALA ALA A . n A 1 165 GLN 165 348 348 GLN GLN A . n A 1 166 ILE 166 349 349 ILE ILE A . n A 1 167 ARG 167 350 350 ARG ARG A . n A 1 168 GLN 168 351 351 GLN GLN A . n A 1 169 GLN 169 352 352 GLN GLN A . n A 1 170 ILE 170 353 353 ILE ILE A . n A 1 171 GLU 171 354 354 GLU GLU A . n A 1 172 GLU 172 355 355 GLU GLU A . n A 1 173 ALA 173 356 356 ALA ALA A . n A 1 174 THR 174 357 357 THR THR A . n A 1 175 SER 175 358 358 SER SER A . n A 1 176 ASP 176 359 359 ASP ASP A . n A 1 177 TYR 177 360 360 TYR TYR A . n A 1 178 ASP 178 361 361 ASP ASP A . n A 1 179 ARG 179 362 362 ARG ARG A . n A 1 180 GLU 180 363 363 GLU GLU A . n A 1 181 LYS 181 364 364 LYS LYS A . n A 1 182 LEU 182 365 365 LEU LEU A . n A 1 183 GLN 183 366 366 GLN GLN A . n A 1 184 GLU 184 367 367 GLU GLU A . n A 1 185 ARG 185 368 368 ARG ARG A . n A 1 186 VAL 186 369 369 VAL VAL A . n A 1 187 ALA 187 370 370 ALA ALA A . n A 1 188 LYS 188 371 371 LYS LYS A . n A 1 189 LEU 189 372 372 LEU LEU A . n A 1 190 ALA 190 373 373 ALA ALA A . n A 1 191 GLY 191 374 374 GLY GLY A . n A 1 192 GLY 192 375 375 GLY GLY A . n A 1 193 VAL 193 376 376 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 111 111 GOL GOL A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . C 3 HOH 40 40 40 HOH HOH A . C 3 HOH 41 41 41 HOH HOH A . C 3 HOH 42 42 42 HOH HOH A . C 3 HOH 43 43 43 HOH HOH A . C 3 HOH 44 44 44 HOH HOH A . C 3 HOH 45 45 45 HOH HOH A . C 3 HOH 46 46 46 HOH HOH A . C 3 HOH 47 47 47 HOH HOH A . C 3 HOH 48 48 48 HOH HOH A . C 3 HOH 49 49 49 HOH HOH A . C 3 HOH 50 50 50 HOH HOH A . C 3 HOH 51 51 51 HOH HOH A . C 3 HOH 52 52 52 HOH HOH A . C 3 HOH 53 53 53 HOH HOH A . C 3 HOH 54 54 54 HOH HOH A . C 3 HOH 55 55 55 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-22 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 REFMAC refinement . ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A GLU 232 ? ? CB A GLU 232 ? ? CG A GLU 232 ? ? 127.87 113.40 14.47 2.20 N 2 1 CD A ARG 268 ? ? NE A ARG 268 ? ? CZ A ARG 268 ? ? 134.98 123.60 11.38 1.40 N 3 1 NE A ARG 268 ? ? CZ A ARG 268 ? ? NH1 A ARG 268 ? ? 124.36 120.30 4.06 0.50 N 4 1 NE A ARG 284 ? ? CZ A ARG 284 ? ? NH2 A ARG 284 ? ? 123.51 120.30 3.21 0.50 N 5 1 CA A GLN 351 ? ? CB A GLN 351 ? ? CG A GLN 351 ? ? 135.86 113.40 22.46 2.20 N 6 1 CB A GLN 351 ? ? CG A GLN 351 ? ? CD A GLN 351 ? ? 135.75 111.60 24.15 2.60 N 7 1 OE1 A GLU 354 ? ? CD A GLU 354 ? ? OE2 A GLU 354 ? ? 112.97 123.30 -10.33 1.20 N 8 1 CG A GLU 354 ? ? CD A GLU 354 ? ? OE2 A GLU 354 ? ? 131.08 118.30 12.78 2.00 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 228 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -121.27 _pdbx_validate_torsion.psi -53.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 185 ? CG ? A LEU 2 CG 2 1 Y 1 A LEU 185 ? CD1 ? A LEU 2 CD1 3 1 Y 1 A LEU 185 ? CD2 ? A LEU 2 CD2 4 1 Y 1 A ARG 188 ? CG ? A ARG 5 CG 5 1 Y 1 A ARG 188 ? CD ? A ARG 5 CD 6 1 Y 1 A ARG 188 ? NE ? A ARG 5 NE 7 1 Y 1 A ARG 188 ? CZ ? A ARG 5 CZ 8 1 Y 1 A ARG 188 ? NH1 ? A ARG 5 NH1 9 1 Y 1 A ARG 188 ? NH2 ? A ARG 5 NH2 10 1 Y 1 A LYS 207 ? CG ? A LYS 24 CG 11 1 Y 1 A LYS 207 ? CD ? A LYS 24 CD 12 1 Y 1 A LYS 207 ? CE ? A LYS 24 CE 13 1 Y 1 A LYS 207 ? NZ ? A LYS 24 NZ 14 1 Y 1 A ASP 224 ? CG ? A ASP 41 CG 15 1 Y 1 A ASP 224 ? OD1 ? A ASP 41 OD1 16 1 Y 1 A ASP 224 ? OD2 ? A ASP 41 OD2 17 1 Y 1 A ARG 231 ? CG ? A ARG 48 CG 18 1 Y 1 A ARG 231 ? CD ? A ARG 48 CD 19 1 Y 1 A ARG 231 ? NE ? A ARG 48 NE 20 1 Y 1 A ARG 231 ? CZ ? A ARG 48 CZ 21 1 Y 1 A ARG 231 ? NH1 ? A ARG 48 NH1 22 1 Y 1 A ARG 231 ? NH2 ? A ARG 48 NH2 23 1 Y 1 A LYS 242 ? CE ? A LYS 59 CE 24 1 Y 1 A LYS 242 ? NZ ? A LYS 59 NZ 25 1 Y 1 A LYS 245 ? CG ? A LYS 62 CG 26 1 Y 1 A LYS 245 ? CD ? A LYS 62 CD 27 1 Y 1 A LYS 245 ? CE ? A LYS 62 CE 28 1 Y 1 A LYS 245 ? NZ ? A LYS 62 NZ 29 1 Y 1 A GLU 257 ? CG ? A GLU 74 CG 30 1 Y 1 A GLU 257 ? CD ? A GLU 74 CD 31 1 Y 1 A GLU 257 ? OE1 ? A GLU 74 OE1 32 1 Y 1 A GLU 257 ? OE2 ? A GLU 74 OE2 33 1 Y 1 A VAL 264 ? CG1 ? A VAL 81 CG1 34 1 Y 1 A VAL 264 ? CG2 ? A VAL 81 CG2 35 1 Y 1 A LYS 272 ? CD ? A LYS 89 CD 36 1 Y 1 A LYS 272 ? CE ? A LYS 89 CE 37 1 Y 1 A LYS 272 ? NZ ? A LYS 89 NZ 38 1 Y 1 A LYS 277 ? CE ? A LYS 94 CE 39 1 Y 1 A LYS 277 ? NZ ? A LYS 94 NZ 40 1 Y 1 A LYS 286 ? CG ? A LYS 103 CG 41 1 Y 1 A LYS 286 ? CD ? A LYS 103 CD 42 1 Y 1 A LYS 286 ? CE ? A LYS 103 CE 43 1 Y 1 A LYS 286 ? NZ ? A LYS 103 NZ 44 1 Y 1 A GLU 303 ? CG ? A GLU 120 CG 45 1 Y 1 A GLU 303 ? CD ? A GLU 120 CD 46 1 Y 1 A GLU 303 ? OE1 ? A GLU 120 OE1 47 1 Y 1 A GLU 303 ? OE2 ? A GLU 120 OE2 48 1 Y 1 A MET 307 ? CG ? A MET 124 CG 49 1 Y 1 A MET 307 ? SD ? A MET 124 SD 50 1 Y 1 A MET 307 ? CE ? A MET 124 CE 51 1 Y 1 A LYS 308 ? CD ? A LYS 125 CD 52 1 Y 1 A LYS 308 ? CE ? A LYS 125 CE 53 1 Y 1 A LYS 308 ? NZ ? A LYS 125 NZ 54 1 Y 1 A GLU 310 ? CG ? A GLU 127 CG 55 1 Y 1 A GLU 310 ? CD ? A GLU 127 CD 56 1 Y 1 A GLU 310 ? OE1 ? A GLU 127 OE1 57 1 Y 1 A GLU 310 ? OE2 ? A GLU 127 OE2 58 1 Y 1 A LYS 311 ? CE ? A LYS 128 CE 59 1 Y 1 A LYS 311 ? NZ ? A LYS 128 NZ 60 1 Y 1 A GLU 315 ? CG ? A GLU 132 CG 61 1 Y 1 A GLU 315 ? CD ? A GLU 132 CD 62 1 Y 1 A GLU 315 ? OE1 ? A GLU 132 OE1 63 1 Y 1 A GLU 315 ? OE2 ? A GLU 132 OE2 64 1 Y 1 A LYS 321 ? CG ? A LYS 138 CG 65 1 Y 1 A LYS 321 ? CD ? A LYS 138 CD 66 1 Y 1 A LYS 321 ? CE ? A LYS 138 CE 67 1 Y 1 A LYS 321 ? NZ ? A LYS 138 NZ 68 1 Y 1 A ARG 322 ? CZ ? A ARG 139 CZ 69 1 Y 1 A ARG 322 ? NH1 ? A ARG 139 NH1 70 1 Y 1 A ARG 322 ? NH2 ? A ARG 139 NH2 71 1 Y 1 A LYS 327 ? CD ? A LYS 144 CD 72 1 Y 1 A LYS 327 ? CE ? A LYS 144 CE 73 1 Y 1 A LYS 327 ? NZ ? A LYS 144 NZ 74 1 Y 1 A GLU 363 ? CG ? A GLU 180 CG 75 1 Y 1 A GLU 363 ? CD ? A GLU 180 CD 76 1 Y 1 A GLU 363 ? OE1 ? A GLU 180 OE1 77 1 Y 1 A GLU 363 ? OE2 ? A GLU 180 OE2 78 1 Y 1 A GLN 366 ? CG ? A GLN 183 CG 79 1 Y 1 A GLN 366 ? CD ? A GLN 183 CD 80 1 Y 1 A GLN 366 ? OE1 ? A GLN 183 OE1 81 1 Y 1 A GLN 366 ? NE2 ? A GLN 183 NE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TYR N N N N 300 TYR CA C N S 301 TYR C C N N 302 TYR O O N N 303 TYR CB C N N 304 TYR CG C Y N 305 TYR CD1 C Y N 306 TYR CD2 C Y N 307 TYR CE1 C Y N 308 TYR CE2 C Y N 309 TYR CZ C Y N 310 TYR OH O N N 311 TYR OXT O N N 312 TYR H H N N 313 TYR H2 H N N 314 TYR HA H N N 315 TYR HB2 H N N 316 TYR HB3 H N N 317 TYR HD1 H N N 318 TYR HD2 H N N 319 TYR HE1 H N N 320 TYR HE2 H N N 321 TYR HH H N N 322 TYR HXT H N N 323 VAL N N N N 324 VAL CA C N S 325 VAL C C N N 326 VAL O O N N 327 VAL CB C N N 328 VAL CG1 C N N 329 VAL CG2 C N N 330 VAL OXT O N N 331 VAL H H N N 332 VAL H2 H N N 333 VAL HA H N N 334 VAL HB H N N 335 VAL HG11 H N N 336 VAL HG12 H N N 337 VAL HG13 H N N 338 VAL HG21 H N N 339 VAL HG22 H N N 340 VAL HG23 H N N 341 VAL HXT H N N 342 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TYR N CA sing N N 285 TYR N H sing N N 286 TYR N H2 sing N N 287 TYR CA C sing N N 288 TYR CA CB sing N N 289 TYR CA HA sing N N 290 TYR C O doub N N 291 TYR C OXT sing N N 292 TYR CB CG sing N N 293 TYR CB HB2 sing N N 294 TYR CB HB3 sing N N 295 TYR CG CD1 doub Y N 296 TYR CG CD2 sing Y N 297 TYR CD1 CE1 sing Y N 298 TYR CD1 HD1 sing N N 299 TYR CD2 CE2 doub Y N 300 TYR CD2 HD2 sing N N 301 TYR CE1 CZ doub Y N 302 TYR CE1 HE1 sing N N 303 TYR CE2 CZ sing Y N 304 TYR CE2 HE2 sing N N 305 TYR CZ OH sing N N 306 TYR OH HH sing N N 307 TYR OXT HXT sing N N 308 VAL N CA sing N N 309 VAL N H sing N N 310 VAL N H2 sing N N 311 VAL CA C sing N N 312 VAL CA CB sing N N 313 VAL CA HA sing N N 314 VAL C O doub N N 315 VAL C OXT sing N N 316 VAL CB CG1 sing N N 317 VAL CB CG2 sing N N 318 VAL CB HB sing N N 319 VAL CG1 HG11 sing N N 320 VAL CG1 HG12 sing N N 321 VAL CG1 HG13 sing N N 322 VAL CG2 HG21 sing N N 323 VAL CG2 HG22 sing N N 324 VAL CG2 HG23 sing N N 325 VAL OXT HXT sing N N 326 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KID _pdbx_initial_refinement_model.details 'GROEL(191-376) (PDB ID: 1KID)' #