data_1FZQ # _entry.id 1FZQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FZQ RCSB RCSB012052 WWPDB D_1000012052 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FZQ _pdbx_database_status.recvd_initial_deposition_date 2000-10-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hillig, R.C.' 1 'Hanzal-Bayer, M.' 2 'Linari, M.' 3 'Becker, J.' 4 'Wittinghofer, A.' 5 'Renault, L.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural and biochemical properties show ARL3-GDP as a distinct GTP binding protein.' 'Structure Fold.Des.' 8 1239 1245 2000 FODEFH UK 0969-2126 1263 ? 11188688 '10.1016/S0969-2126(00)00531-1' 1 ;The Delta Subunit of Rod Specific Cyclic GMP Phophodiesterase, PDE Delta, Interacts with the Arf-like Protein Arl3 in a GTP Specific Manner ; 'FEBS Lett.' 458 55 59 1999 FEBLAL NE 0014-5793 0165 ? ? '10.1016/S0014-5793(99)01117-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hillig, R.C.' 1 primary 'Hanzal-Bayer, M.' 2 primary 'Linari, M.' 3 primary 'Becker, J.' 4 primary 'Wittinghofer, A.' 5 primary 'Renault, L.' 6 1 'Linari, M.' 7 1 'Hanzal-Bayer, M.' 8 1 'Becker, J.' 9 # _cell.entry_id 1FZQ _cell.length_a 74.421 _cell.length_b 64.583 _cell.length_c 40.386 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FZQ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3' 20380.307 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 'AMMONIUM ION' 18.038 1 ? ? ? ? 4 non-polymer syn '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 195.237 1 ? ? ? ? 5 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 6 water nat water 18.015 163 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ARF-LIKE PROTEIN 3, ARL3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSY FENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSAL TGEGVQDGMNWVCKNVNAKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSY FENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSAL TGEGVQDGMNWVCKNVNAKKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 LEU n 1 4 SER n 1 5 ILE n 1 6 LEU n 1 7 ARG n 1 8 LYS n 1 9 LEU n 1 10 LYS n 1 11 SER n 1 12 ALA n 1 13 PRO n 1 14 ASP n 1 15 GLN n 1 16 GLU n 1 17 VAL n 1 18 ARG n 1 19 ILE n 1 20 LEU n 1 21 LEU n 1 22 LEU n 1 23 GLY n 1 24 LEU n 1 25 ASP n 1 26 ASN n 1 27 ALA n 1 28 GLY n 1 29 LYS n 1 30 THR n 1 31 THR n 1 32 LEU n 1 33 LEU n 1 34 LYS n 1 35 GLN n 1 36 LEU n 1 37 ALA n 1 38 SER n 1 39 GLU n 1 40 ASP n 1 41 ILE n 1 42 SER n 1 43 HIS n 1 44 ILE n 1 45 THR n 1 46 PRO n 1 47 THR n 1 48 GLN n 1 49 GLY n 1 50 PHE n 1 51 ASN n 1 52 ILE n 1 53 LYS n 1 54 SER n 1 55 VAL n 1 56 GLN n 1 57 SER n 1 58 GLN n 1 59 GLY n 1 60 PHE n 1 61 LYS n 1 62 LEU n 1 63 ASN n 1 64 VAL n 1 65 TRP n 1 66 ASP n 1 67 ILE n 1 68 GLY n 1 69 GLY n 1 70 GLN n 1 71 ARG n 1 72 LYS n 1 73 ILE n 1 74 ARG n 1 75 PRO n 1 76 TYR n 1 77 TRP n 1 78 ARG n 1 79 SER n 1 80 TYR n 1 81 PHE n 1 82 GLU n 1 83 ASN n 1 84 THR n 1 85 ASP n 1 86 ILE n 1 87 LEU n 1 88 ILE n 1 89 TYR n 1 90 VAL n 1 91 ILE n 1 92 ASP n 1 93 SER n 1 94 ALA n 1 95 ASP n 1 96 ARG n 1 97 LYS n 1 98 ARG n 1 99 PHE n 1 100 GLU n 1 101 GLU n 1 102 THR n 1 103 GLY n 1 104 GLN n 1 105 GLU n 1 106 LEU n 1 107 THR n 1 108 GLU n 1 109 LEU n 1 110 LEU n 1 111 GLU n 1 112 GLU n 1 113 GLU n 1 114 LYS n 1 115 LEU n 1 116 SER n 1 117 CYS n 1 118 VAL n 1 119 PRO n 1 120 VAL n 1 121 LEU n 1 122 ILE n 1 123 PHE n 1 124 ALA n 1 125 ASN n 1 126 LYS n 1 127 GLN n 1 128 ASP n 1 129 LEU n 1 130 LEU n 1 131 THR n 1 132 ALA n 1 133 ALA n 1 134 PRO n 1 135 ALA n 1 136 SER n 1 137 GLU n 1 138 ILE n 1 139 ALA n 1 140 GLU n 1 141 GLY n 1 142 LEU n 1 143 ASN n 1 144 LEU n 1 145 HIS n 1 146 THR n 1 147 ILE n 1 148 ARG n 1 149 ASP n 1 150 ARG n 1 151 VAL n 1 152 TRP n 1 153 GLN n 1 154 ILE n 1 155 GLN n 1 156 SER n 1 157 CYS n 1 158 SER n 1 159 ALA n 1 160 LEU n 1 161 THR n 1 162 GLY n 1 163 GLU n 1 164 GLY n 1 165 VAL n 1 166 GLN n 1 167 ASP n 1 168 GLY n 1 169 MET n 1 170 ASN n 1 171 TRP n 1 172 VAL n 1 173 CYS n 1 174 LYS n 1 175 ASN n 1 176 VAL n 1 177 ASN n 1 178 ALA n 1 179 LYS n 1 180 LYS n 1 181 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET21D _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code ARL3_MOUSE _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q9WUL7 _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_seq_one_letter_code ;GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSY FENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSAL TGEGVQDGMNWVCKNVNAKKK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FZQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 181 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WUL7 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 182 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 182 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MES non-polymer . '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' ? 'C6 H13 N O4 S' 195.237 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FZQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.33 _exptl_crystal.density_Matthews 2.38 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'ammonium sulphate, MES, magnesium chloride, DTE, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-09-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.782 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID13' _diffrn_source.pdbx_wavelength 0.782 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID13 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FZQ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 29.62 _reflns.d_resolution_high 1.70 _reflns.number_obs 22047 _reflns.number_all 22084 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.0910000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.2 _reflns.B_iso_Wilson_estimate 18.9 _reflns.pdbx_redundancy 17.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.73 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs 0.2990000 _reflns_shell.meanI_over_sigI_obs 6.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 15.1 _reflns_shell.number_unique_all 1098 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1FZQ _refine.ls_number_reflns_obs 22047 _refine.ls_number_reflns_all 22047 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 114931615.66 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 29.62 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.2150000 _refine.ls_R_factor_all 0.2150000 _refine.ls_R_factor_R_work 0.2130000 _refine.ls_R_factor_R_free 0.2350000 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.1 _refine.ls_number_reflns_R_free 2005 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 23.8 _refine.aniso_B[1][1] -2.43 _refine.aniso_B[2][2] 0.60 _refine.aniso_B[3][3] 1.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.366 _refine.solvent_model_param_bsol 45.72 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'human ARF1-GDP, PDB ENTRY 1HUR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1FZQ _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1414 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1628 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 29.62 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.80 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.53 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.55 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.02 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.12 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 3271 _refine_ls_shell.R_factor_R_work 0.2360000 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.2630000 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 326 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 GDP.PARAM GDP.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 MES.PARAM MES.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1FZQ _struct.title 'CRYSTAL STRUCTURE OF MURINE ARL3-GDP' _struct.pdbx_descriptor 'ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FZQ _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'Protein-GDP complex without magnesium, ARF family, Ras Superfamily, G-domain, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_biol.id 1 _struct_biol.details ;The biological active unit is most probably a monomer. The electron density map showed a disulphide bridge between Cys 118 and a symmetry-related Cys 118 of a crystal neighbour. This is considered to be a crystallization artefact and was not included in the model. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? LEU A 9 ? SER A 5 LEU A 10 1 ? 6 HELX_P HELX_P2 2 GLY A 28 ? ALA A 37 ? GLY A 29 ALA A 38 1 ? 10 HELX_P HELX_P3 3 GLN A 70 ? LYS A 72 ? GLN A 71 LYS A 73 5 ? 3 HELX_P HELX_P4 4 ILE A 73 ? GLU A 82 ? ILE A 74 GLU A 83 1 ? 10 HELX_P HELX_P5 5 ASP A 95 ? LYS A 97 ? ASP A 96 LYS A 98 5 ? 3 HELX_P HELX_P6 6 ARG A 98 ? LEU A 110 ? ARG A 99 LEU A 111 1 ? 13 HELX_P HELX_P7 7 GLU A 111 ? SER A 116 ? GLU A 112 SER A 117 5 ? 6 HELX_P HELX_P8 8 PRO A 134 ? LEU A 142 ? PRO A 135 LEU A 143 1 ? 9 HELX_P HELX_P9 9 ASN A 143 ? ILE A 147 ? ASN A 144 ILE A 148 5 ? 5 HELX_P HELX_P10 10 GLY A 164 ? ASN A 175 ? GLY A 165 ASN A 176 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 42 ? THR A 47 ? SER A 43 THR A 48 A 2 PHE A 50 ? SER A 57 ? PHE A 51 SER A 58 A 3 PHE A 60 ? ASP A 66 ? PHE A 61 ASP A 67 A 4 VAL A 17 ? GLY A 23 ? VAL A 18 GLY A 24 A 5 ILE A 86 ? ASP A 92 ? ILE A 87 ASP A 93 A 6 VAL A 120 ? ASN A 125 ? VAL A 121 ASN A 126 A 7 TRP A 152 ? SER A 156 ? TRP A 153 SER A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 47 ? O THR A 48 N PHE A 50 ? N PHE A 51 A 2 3 N SER A 57 ? N SER A 58 O PHE A 60 ? O PHE A 61 A 3 4 N LYS A 61 ? N LYS A 62 O VAL A 17 ? O VAL A 18 A 4 5 N LEU A 20 ? N LEU A 21 O ILE A 86 ? O ILE A 87 A 5 6 N TYR A 89 ? N TYR A 90 O LEU A 121 ? O LEU A 122 A 6 7 N ILE A 122 ? N ILE A 123 O GLN A 153 ? O GLN A 154 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 401' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 402' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NH4 A 501' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MES A 201' AC5 Software ? ? ? ? 24 'BINDING SITE FOR RESIDUE GDP A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LEU A 3 ? LEU A 4 . ? 1_555 ? 2 AC1 4 SER A 4 ? SER A 5 . ? 1_555 ? 3 AC1 4 ARG A 7 ? ARG A 8 . ? 1_555 ? 4 AC1 4 SER A 38 ? SER A 39 . ? 1_555 ? 5 AC2 6 THR A 30 ? THR A 31 . ? 1_555 ? 6 AC2 6 LYS A 34 ? LYS A 35 . ? 1_555 ? 7 AC2 6 HIS A 43 ? HIS A 44 . ? 1_555 ? 8 AC2 6 LYS A 53 ? LYS A 54 . ? 1_555 ? 9 AC2 6 ARG A 148 ? ARG A 149 . ? 4_556 ? 10 AC2 6 HOH G . ? HOH A 642 . ? 1_555 ? 11 AC3 2 HIS A 43 ? HIS A 44 . ? 4_456 ? 12 AC3 2 GLU A 140 ? GLU A 141 . ? 1_555 ? 13 AC4 6 ASN A 51 ? ASN A 52 . ? 4_456 ? 14 AC4 6 HIS A 145 ? HIS A 146 . ? 1_555 ? 15 AC4 6 VAL A 151 ? VAL A 152 . ? 1_555 ? 16 AC4 6 TRP A 152 ? TRP A 153 . ? 1_555 ? 17 AC4 6 GLN A 153 ? GLN A 154 . ? 1_555 ? 18 AC4 6 HOH G . ? HOH A 615 . ? 1_555 ? 19 AC5 24 ASN A 26 ? ASN A 27 . ? 1_555 ? 20 AC5 24 ALA A 27 ? ALA A 28 . ? 1_555 ? 21 AC5 24 GLY A 28 ? GLY A 29 . ? 1_555 ? 22 AC5 24 LYS A 29 ? LYS A 30 . ? 1_555 ? 23 AC5 24 THR A 30 ? THR A 31 . ? 1_555 ? 24 AC5 24 THR A 31 ? THR A 32 . ? 1_555 ? 25 AC5 24 TYR A 76 ? TYR A 77 . ? 3_546 ? 26 AC5 24 SER A 79 ? SER A 80 . ? 3_546 ? 27 AC5 24 GLU A 82 ? GLU A 83 . ? 3_546 ? 28 AC5 24 ASN A 125 ? ASN A 126 . ? 1_555 ? 29 AC5 24 LYS A 126 ? LYS A 127 . ? 1_555 ? 30 AC5 24 ASP A 128 ? ASP A 129 . ? 1_555 ? 31 AC5 24 LEU A 129 ? LEU A 130 . ? 1_555 ? 32 AC5 24 SER A 158 ? SER A 159 . ? 1_555 ? 33 AC5 24 ALA A 159 ? ALA A 160 . ? 1_555 ? 34 AC5 24 LEU A 160 ? LEU A 161 . ? 1_555 ? 35 AC5 24 HOH G . ? HOH A 524 . ? 1_555 ? 36 AC5 24 HOH G . ? HOH A 529 . ? 3_546 ? 37 AC5 24 HOH G . ? HOH A 536 . ? 1_555 ? 38 AC5 24 HOH G . ? HOH A 545 . ? 1_555 ? 39 AC5 24 HOH G . ? HOH A 553 . ? 1_555 ? 40 AC5 24 HOH G . ? HOH A 631 . ? 1_555 ? 41 AC5 24 HOH G . ? HOH A 649 . ? 3_546 ? 42 AC5 24 HOH G . ? HOH A 660 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FZQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FZQ _atom_sites.fract_transf_matrix[1][1] 0.013437 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015484 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024761 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 2 GLY GLY A . n A 1 2 LEU 2 3 3 LEU LEU A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 SER 4 5 5 SER SER A . n A 1 5 ILE 5 6 6 ILE ILE A . n A 1 6 LEU 6 7 7 LEU LEU A . n A 1 7 ARG 7 8 8 ARG ARG A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 LEU 9 10 10 LEU LEU A . n A 1 10 LYS 10 11 11 LYS LYS A . n A 1 11 SER 11 12 12 SER SER A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 PRO 13 14 14 PRO PRO A . n A 1 14 ASP 14 15 15 ASP ASP A . n A 1 15 GLN 15 16 16 GLN GLN A . n A 1 16 GLU 16 17 17 GLU GLU A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 ARG 18 19 19 ARG ARG A . n A 1 19 ILE 19 20 20 ILE ILE A . n A 1 20 LEU 20 21 21 LEU LEU A . n A 1 21 LEU 21 22 22 LEU LEU A . n A 1 22 LEU 22 23 23 LEU LEU A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 ASP 25 26 26 ASP ASP A . n A 1 26 ASN 26 27 27 ASN ASN A . n A 1 27 ALA 27 28 28 ALA ALA A . n A 1 28 GLY 28 29 29 GLY GLY A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 THR 30 31 31 THR THR A . n A 1 31 THR 31 32 32 THR THR A . n A 1 32 LEU 32 33 33 LEU LEU A . n A 1 33 LEU 33 34 34 LEU LEU A . n A 1 34 LYS 34 35 35 LYS LYS A . n A 1 35 GLN 35 36 36 GLN GLN A . n A 1 36 LEU 36 37 37 LEU LEU A . n A 1 37 ALA 37 38 38 ALA ALA A . n A 1 38 SER 38 39 39 SER SER A . n A 1 39 GLU 39 40 40 GLU GLU A . n A 1 40 ASP 40 41 41 ASP ASP A . n A 1 41 ILE 41 42 42 ILE ILE A . n A 1 42 SER 42 43 43 SER SER A . n A 1 43 HIS 43 44 44 HIS HIS A . n A 1 44 ILE 44 45 45 ILE ILE A . n A 1 45 THR 45 46 46 THR THR A . n A 1 46 PRO 46 47 47 PRO PRO A . n A 1 47 THR 47 48 48 THR THR A . n A 1 48 GLN 48 49 49 GLN GLN A . n A 1 49 GLY 49 50 50 GLY GLY A . n A 1 50 PHE 50 51 51 PHE PHE A . n A 1 51 ASN 51 52 52 ASN ASN A . n A 1 52 ILE 52 53 53 ILE ILE A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 SER 54 55 55 SER SER A . n A 1 55 VAL 55 56 56 VAL VAL A . n A 1 56 GLN 56 57 57 GLN GLN A . n A 1 57 SER 57 58 58 SER SER A . n A 1 58 GLN 58 59 59 GLN GLN A . n A 1 59 GLY 59 60 60 GLY GLY A . n A 1 60 PHE 60 61 61 PHE PHE A . n A 1 61 LYS 61 62 62 LYS LYS A . n A 1 62 LEU 62 63 63 LEU LEU A . n A 1 63 ASN 63 64 64 ASN ASN A . n A 1 64 VAL 64 65 65 VAL VAL A . n A 1 65 TRP 65 66 66 TRP TRP A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 ILE 67 68 68 ILE ILE A . n A 1 68 GLY 68 69 69 GLY GLY A . n A 1 69 GLY 69 70 70 GLY GLY A . n A 1 70 GLN 70 71 71 GLN GLN A . n A 1 71 ARG 71 72 72 ARG ARG A . n A 1 72 LYS 72 73 73 LYS LYS A . n A 1 73 ILE 73 74 74 ILE ILE A . n A 1 74 ARG 74 75 75 ARG ARG A . n A 1 75 PRO 75 76 76 PRO PRO A . n A 1 76 TYR 76 77 77 TYR TYR A . n A 1 77 TRP 77 78 78 TRP TRP A . n A 1 78 ARG 78 79 79 ARG ARG A . n A 1 79 SER 79 80 80 SER SER A . n A 1 80 TYR 80 81 81 TYR TYR A . n A 1 81 PHE 81 82 82 PHE PHE A . n A 1 82 GLU 82 83 83 GLU GLU A . n A 1 83 ASN 83 84 84 ASN ASN A . n A 1 84 THR 84 85 85 THR THR A . n A 1 85 ASP 85 86 86 ASP ASP A . n A 1 86 ILE 86 87 87 ILE ILE A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 TYR 89 90 90 TYR TYR A . n A 1 90 VAL 90 91 91 VAL VAL A . n A 1 91 ILE 91 92 92 ILE ILE A . n A 1 92 ASP 92 93 93 ASP ASP A . n A 1 93 SER 93 94 94 SER SER A . n A 1 94 ALA 94 95 95 ALA ALA A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 ARG 96 97 97 ARG ARG A . n A 1 97 LYS 97 98 98 LYS LYS A . n A 1 98 ARG 98 99 99 ARG ARG A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 GLU 100 101 101 GLU GLU A . n A 1 101 GLU 101 102 102 GLU GLU A . n A 1 102 THR 102 103 103 THR THR A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 GLN 104 105 105 GLN GLN A . n A 1 105 GLU 105 106 106 GLU GLU A . n A 1 106 LEU 106 107 107 LEU LEU A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 GLU 108 109 109 GLU GLU A . n A 1 109 LEU 109 110 110 LEU LEU A . n A 1 110 LEU 110 111 111 LEU LEU A . n A 1 111 GLU 111 112 112 GLU GLU A . n A 1 112 GLU 112 113 113 GLU GLU A . n A 1 113 GLU 113 114 114 GLU GLU A . n A 1 114 LYS 114 115 115 LYS LYS A . n A 1 115 LEU 115 116 116 LEU LEU A . n A 1 116 SER 116 117 117 SER SER A . n A 1 117 CYS 117 118 118 CYS CYS A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 PRO 119 120 120 PRO PRO A . n A 1 120 VAL 120 121 121 VAL VAL A . n A 1 121 LEU 121 122 122 LEU LEU A . n A 1 122 ILE 122 123 123 ILE ILE A . n A 1 123 PHE 123 124 124 PHE PHE A . n A 1 124 ALA 124 125 125 ALA ALA A . n A 1 125 ASN 125 126 126 ASN ASN A . n A 1 126 LYS 126 127 127 LYS LYS A . n A 1 127 GLN 127 128 128 GLN GLN A . n A 1 128 ASP 128 129 129 ASP ASP A . n A 1 129 LEU 129 130 130 LEU LEU A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 THR 131 132 132 THR THR A . n A 1 132 ALA 132 133 133 ALA ALA A . n A 1 133 ALA 133 134 134 ALA ALA A . n A 1 134 PRO 134 135 135 PRO PRO A . n A 1 135 ALA 135 136 136 ALA ALA A . n A 1 136 SER 136 137 137 SER SER A . n A 1 137 GLU 137 138 138 GLU GLU A . n A 1 138 ILE 138 139 139 ILE ILE A . n A 1 139 ALA 139 140 140 ALA ALA A . n A 1 140 GLU 140 141 141 GLU GLU A . n A 1 141 GLY 141 142 142 GLY GLY A . n A 1 142 LEU 142 143 143 LEU LEU A . n A 1 143 ASN 143 144 144 ASN ASN A . n A 1 144 LEU 144 145 145 LEU LEU A . n A 1 145 HIS 145 146 146 HIS HIS A . n A 1 146 THR 146 147 147 THR THR A . n A 1 147 ILE 147 148 148 ILE ILE A . n A 1 148 ARG 148 149 149 ARG ARG A . n A 1 149 ASP 149 150 150 ASP ASP A . n A 1 150 ARG 150 151 151 ARG ARG A . n A 1 151 VAL 151 152 152 VAL VAL A . n A 1 152 TRP 152 153 153 TRP TRP A . n A 1 153 GLN 153 154 154 GLN GLN A . n A 1 154 ILE 154 155 155 ILE ILE A . n A 1 155 GLN 155 156 156 GLN GLN A . n A 1 156 SER 156 157 157 SER SER A . n A 1 157 CYS 157 158 158 CYS CYS A . n A 1 158 SER 158 159 159 SER SER A . n A 1 159 ALA 159 160 160 ALA ALA A . n A 1 160 LEU 160 161 161 LEU LEU A . n A 1 161 THR 161 162 162 THR THR A . n A 1 162 GLY 162 163 163 GLY GLY A . n A 1 163 GLU 163 164 164 GLU GLU A . n A 1 164 GLY 164 165 165 GLY GLY A . n A 1 165 VAL 165 166 166 VAL VAL A . n A 1 166 GLN 166 167 167 GLN GLN A . n A 1 167 ASP 167 168 168 ASP ASP A . n A 1 168 GLY 168 169 169 GLY GLY A . n A 1 169 MET 169 170 170 MET MET A . n A 1 170 ASN 170 171 171 ASN ASN A . n A 1 171 TRP 171 172 172 TRP TRP A . n A 1 172 VAL 172 173 173 VAL VAL A . n A 1 173 CYS 173 174 174 CYS CYS A . n A 1 174 LYS 174 175 175 LYS LYS A . n A 1 175 ASN 175 176 176 ASN ASN A . n A 1 176 VAL 176 177 177 VAL VAL A . n A 1 177 ASN 177 178 ? ? ? A . n A 1 178 ALA 178 179 ? ? ? A . n A 1 179 LYS 179 180 ? ? ? A . n A 1 180 LYS 180 181 ? ? ? A . n A 1 181 LYS 181 182 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-12-06 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement 1.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 4 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.67 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation 17.67 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 3 ? ? 167.44 65.34 2 1 LEU A 4 ? ? -33.37 130.34 3 1 PRO A 14 ? ? -43.25 172.80 4 1 LYS A 73 ? ? -62.22 4.40 5 1 ARG A 151 ? ? 179.92 163.00 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 178 ? A ASN 177 2 1 Y 1 A ALA 179 ? A ALA 178 3 1 Y 1 A LYS 180 ? A LYS 179 4 1 Y 1 A LYS 181 ? A LYS 180 5 1 Y 1 A LYS 182 ? A LYS 181 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'AMMONIUM ION' NH4 4 '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' MES 5 "GUANOSINE-5'-DIPHOSPHATE" GDP 6 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 1 SO4 SO4 A . C 2 SO4 1 402 2 SO4 SO4 A . D 3 NH4 1 501 1 NH4 NH4 A . E 4 MES 1 201 1 MES MES A . F 5 GDP 1 301 1 GDP GDP A . G 6 HOH 1 502 1 HOH WAT A . G 6 HOH 2 503 2 HOH WAT A . G 6 HOH 3 504 3 HOH WAT A . G 6 HOH 4 505 4 HOH WAT A . G 6 HOH 5 506 5 HOH WAT A . G 6 HOH 6 507 6 HOH WAT A . G 6 HOH 7 508 7 HOH WAT A . G 6 HOH 8 509 8 HOH WAT A . G 6 HOH 9 510 9 HOH WAT A . G 6 HOH 10 511 10 HOH WAT A . G 6 HOH 11 512 11 HOH WAT A . G 6 HOH 12 513 12 HOH WAT A . G 6 HOH 13 514 13 HOH WAT A . G 6 HOH 14 515 14 HOH WAT A . G 6 HOH 15 516 15 HOH WAT A . G 6 HOH 16 517 16 HOH WAT A . G 6 HOH 17 518 17 HOH WAT A . G 6 HOH 18 519 18 HOH WAT A . G 6 HOH 19 520 19 HOH WAT A . G 6 HOH 20 521 20 HOH WAT A . G 6 HOH 21 522 21 HOH WAT A . G 6 HOH 22 523 22 HOH WAT A . G 6 HOH 23 524 23 HOH WAT A . G 6 HOH 24 525 24 HOH WAT A . G 6 HOH 25 526 25 HOH WAT A . G 6 HOH 26 527 26 HOH WAT A . G 6 HOH 27 528 27 HOH WAT A . G 6 HOH 28 529 28 HOH WAT A . G 6 HOH 29 530 29 HOH WAT A . G 6 HOH 30 531 30 HOH WAT A . G 6 HOH 31 532 31 HOH WAT A . G 6 HOH 32 533 32 HOH WAT A . G 6 HOH 33 534 33 HOH WAT A . G 6 HOH 34 535 34 HOH WAT A . G 6 HOH 35 536 35 HOH WAT A . G 6 HOH 36 537 36 HOH WAT A . G 6 HOH 37 538 37 HOH WAT A . G 6 HOH 38 539 38 HOH WAT A . G 6 HOH 39 540 39 HOH WAT A . G 6 HOH 40 541 40 HOH WAT A . G 6 HOH 41 542 41 HOH WAT A . G 6 HOH 42 543 42 HOH WAT A . G 6 HOH 43 544 43 HOH WAT A . G 6 HOH 44 545 44 HOH WAT A . G 6 HOH 45 546 45 HOH WAT A . G 6 HOH 46 547 46 HOH WAT A . G 6 HOH 47 548 47 HOH WAT A . G 6 HOH 48 549 48 HOH WAT A . G 6 HOH 49 550 49 HOH WAT A . G 6 HOH 50 551 50 HOH WAT A . G 6 HOH 51 552 51 HOH WAT A . G 6 HOH 52 553 52 HOH WAT A . G 6 HOH 53 554 53 HOH WAT A . G 6 HOH 54 555 54 HOH WAT A . G 6 HOH 55 556 55 HOH WAT A . G 6 HOH 56 557 56 HOH WAT A . G 6 HOH 57 558 57 HOH WAT A . G 6 HOH 58 559 58 HOH WAT A . G 6 HOH 59 560 59 HOH WAT A . G 6 HOH 60 561 60 HOH WAT A . G 6 HOH 61 562 61 HOH WAT A . G 6 HOH 62 563 62 HOH WAT A . G 6 HOH 63 564 63 HOH WAT A . G 6 HOH 64 565 64 HOH WAT A . G 6 HOH 65 566 65 HOH WAT A . G 6 HOH 66 567 66 HOH WAT A . G 6 HOH 67 568 67 HOH WAT A . G 6 HOH 68 569 68 HOH WAT A . G 6 HOH 69 570 69 HOH WAT A . G 6 HOH 70 571 70 HOH WAT A . G 6 HOH 71 572 71 HOH WAT A . G 6 HOH 72 573 72 HOH WAT A . G 6 HOH 73 574 73 HOH WAT A . G 6 HOH 74 575 74 HOH WAT A . G 6 HOH 75 576 75 HOH WAT A . G 6 HOH 76 577 76 HOH WAT A . G 6 HOH 77 578 77 HOH WAT A . G 6 HOH 78 579 78 HOH WAT A . G 6 HOH 79 580 79 HOH WAT A . G 6 HOH 80 581 80 HOH WAT A . G 6 HOH 81 582 81 HOH WAT A . G 6 HOH 82 583 82 HOH WAT A . G 6 HOH 83 584 83 HOH WAT A . G 6 HOH 84 585 84 HOH WAT A . G 6 HOH 85 586 85 HOH WAT A . G 6 HOH 86 587 86 HOH WAT A . G 6 HOH 87 588 87 HOH WAT A . G 6 HOH 88 589 88 HOH WAT A . G 6 HOH 89 590 89 HOH WAT A . G 6 HOH 90 591 90 HOH WAT A . G 6 HOH 91 592 91 HOH WAT A . G 6 HOH 92 593 92 HOH WAT A . G 6 HOH 93 594 93 HOH WAT A . G 6 HOH 94 595 94 HOH WAT A . G 6 HOH 95 596 95 HOH WAT A . G 6 HOH 96 597 96 HOH WAT A . G 6 HOH 97 598 97 HOH WAT A . G 6 HOH 98 599 98 HOH WAT A . G 6 HOH 99 600 99 HOH WAT A . G 6 HOH 100 601 100 HOH WAT A . G 6 HOH 101 602 101 HOH WAT A . G 6 HOH 102 603 102 HOH WAT A . G 6 HOH 103 604 103 HOH WAT A . G 6 HOH 104 605 104 HOH WAT A . G 6 HOH 105 606 105 HOH WAT A . G 6 HOH 106 607 107 HOH WAT A . G 6 HOH 107 608 108 HOH WAT A . G 6 HOH 108 609 109 HOH WAT A . G 6 HOH 109 610 110 HOH WAT A . G 6 HOH 110 611 111 HOH WAT A . G 6 HOH 111 612 112 HOH WAT A . G 6 HOH 112 613 113 HOH WAT A . G 6 HOH 113 614 114 HOH WAT A . G 6 HOH 114 615 115 HOH WAT A . G 6 HOH 115 616 116 HOH WAT A . G 6 HOH 116 617 117 HOH WAT A . G 6 HOH 117 618 118 HOH WAT A . G 6 HOH 118 619 119 HOH WAT A . G 6 HOH 119 620 120 HOH WAT A . G 6 HOH 120 621 121 HOH WAT A . G 6 HOH 121 622 122 HOH WAT A . G 6 HOH 122 623 123 HOH WAT A . G 6 HOH 123 624 124 HOH WAT A . G 6 HOH 124 625 125 HOH WAT A . G 6 HOH 125 626 126 HOH WAT A . G 6 HOH 126 627 127 HOH WAT A . G 6 HOH 127 628 128 HOH WAT A . G 6 HOH 128 629 129 HOH WAT A . G 6 HOH 129 630 130 HOH WAT A . G 6 HOH 130 631 131 HOH WAT A . G 6 HOH 131 632 132 HOH WAT A . G 6 HOH 132 633 133 HOH WAT A . G 6 HOH 133 634 134 HOH WAT A . G 6 HOH 134 635 135 HOH WAT A . G 6 HOH 135 636 136 HOH WAT A . G 6 HOH 136 637 137 HOH WAT A . G 6 HOH 137 638 138 HOH WAT A . G 6 HOH 138 639 139 HOH WAT A . G 6 HOH 139 640 140 HOH WAT A . G 6 HOH 140 641 141 HOH WAT A . G 6 HOH 141 642 142 HOH WAT A . G 6 HOH 142 643 143 HOH WAT A . G 6 HOH 143 644 144 HOH WAT A . G 6 HOH 144 645 145 HOH WAT A . G 6 HOH 145 646 146 HOH WAT A . G 6 HOH 146 647 147 HOH WAT A . G 6 HOH 147 648 148 HOH WAT A . G 6 HOH 148 649 149 HOH WAT A . G 6 HOH 149 650 150 HOH WAT A . G 6 HOH 150 651 151 HOH WAT A . G 6 HOH 151 652 152 HOH WAT A . G 6 HOH 152 653 154 HOH WAT A . G 6 HOH 153 654 155 HOH WAT A . G 6 HOH 154 655 156 HOH WAT A . G 6 HOH 155 656 157 HOH WAT A . G 6 HOH 156 657 158 HOH WAT A . G 6 HOH 157 658 159 HOH WAT A . G 6 HOH 158 659 160 HOH WAT A . G 6 HOH 159 660 161 HOH WAT A . G 6 HOH 160 661 162 HOH WAT A . G 6 HOH 161 662 163 HOH WAT A . G 6 HOH 162 663 164 HOH WAT A . G 6 HOH 163 664 165 HOH WAT A . #