HEADER IMMUNE SYSTEM, MEMBRANE PROTEIN 13-OCT-00 1G1S TITLE P-SELECTIN LECTIN/EGF DOMAINS COMPLEXED WITH PSGL-1 PEPTIDE CAVEAT 1G1S NGA E 1 HAS WRONG CHIRALITY AT ATOM C1 NGA F 1 HAS WRONG CAVEAT 2 1G1S CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: P-SELECTIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LECTIN/EGF DOMAINS; COMPND 5 SYNONYM: GRANULE MEMBRANE PROTEIN 140, GMP-140, PADGEM, CD62P, COMPND 6 LEUKOCYTE-ENDOTHELIAL CELL ADHESION MOLECULE 3, LECAM3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PSGL-1 PEPTIDE; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: PSGL-1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL: CHO CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 17 EXPRESSION_SYSTEM_CELL: CHO CELLS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SELECTIN, LECTIN, EGF, SULPHATED, SLEX, IMMUNE SYSTEM, MEMBRANE KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.S.SOMERS,R.T.CAMPHAUSEN REVDAT 7 30-OCT-24 1G1S 1 REMARK REVDAT 6 03-APR-24 1G1S 1 HETSYN REVDAT 5 29-JUL-20 1G1S 1 CAVEAT COMPND REMARK SEQADV REVDAT 5 2 1 HETNAM LINK SITE ATOM REVDAT 4 13-JUL-11 1G1S 1 VERSN REVDAT 3 24-FEB-09 1G1S 1 VERSN REVDAT 2 01-APR-03 1G1S 1 JRNL REVDAT 1 13-OCT-01 1G1S 0 JRNL AUTH W.S.SOMERS,J.TANG,G.D.SHAW,R.T.CAMPHAUSEN JRNL TITL INSIGHTS INTO THE MOLECULAR BASIS OF LEUKOCYTE TETHERING AND JRNL TITL 2 ROLLING REVEALED BY STRUCTURES OF P- AND E-SELECTIN BOUND TO JRNL TITL 3 SLE(X) AND PSGL-1. JRNL REF CELL(CAMBRIDGE,MASS.) V. 103 467 2000 JRNL REFN ISSN 0092-8674 JRNL PMID 11081633 JRNL DOI 10.1016/S0092-8674(00)00138-0 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 44923 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2246 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 220 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.540 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1G1S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-00. REMARK 100 THE DEPOSITION ID IS D_1000012126. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-97 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987 REMARK 200 MONOCHROMATOR : SYNCHROTRON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44923 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.630 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.63 REMARK 200 R MERGE FOR SHELL (I) : 0.27400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: P-SELECTIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 10 MM TRIS, 150 MN NACL, REMARK 280 4 MM CACL2, 50 MM SRCL2, 5% PEG 6000, 33% MPD, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP AT 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.72250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.37800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 93.64450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.72250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.37800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.64450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.72250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.37800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 93.64450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.72250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.37800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.64450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 159 REMARK 465 ASP A 160 REMARK 465 ASP A 161 REMARK 465 LYS A 162 REMARK 465 ASP B 158 REMARK 465 ASP B 159 REMARK 465 ASP B 160 REMARK 465 ASP B 161 REMARK 465 LYS B 162 REMARK 465 GLN C 601 REMARK 465 ALA C 602 REMARK 465 THR C 603 REMARK 465 GLU C 604 REMARK 465 TYS C 605 REMARK 465 PRO C 619 REMARK 465 ARG C 620 REMARK 465 PRO C 621 REMARK 465 MET C 622 REMARK 465 MET C 623 REMARK 465 ASP C 624 REMARK 465 ASP C 625 REMARK 465 ASP C 626 REMARK 465 ASP C 627 REMARK 465 LYS C 628 REMARK 465 GLN D 601 REMARK 465 ALA D 602 REMARK 465 THR D 603 REMARK 465 GLU D 604 REMARK 465 PRO D 619 REMARK 465 ARG D 620 REMARK 465 PRO D 621 REMARK 465 MET D 622 REMARK 465 MET D 623 REMARK 465 ASP D 624 REMARK 465 ASP D 625 REMARK 465 ASP D 626 REMARK 465 ASP D 627 REMARK 465 LYS D 628 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 ASN A 57 CG OD1 ND2 REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 ASN A 71 CG OD1 ND2 REMARK 470 ASP A 158 CG OD1 OD2 REMARK 470 ARG B 22 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 57 CG OD1 ND2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 MET B 125 CG SD CE REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 606 CG CD OE1 OE2 REMARK 470 TYS D 605 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYS D 605 S O1 O2 O3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 950 O HOH B 950 4576 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 23 -137.03 -129.66 REMARK 500 ALA A 28 75.29 -112.92 REMARK 500 ILE A 29 91.88 -41.86 REMARK 500 TYR A 48 -158.45 61.79 REMARK 500 ASN A 57 -92.65 67.21 REMARK 500 ASN A 83 47.43 36.22 REMARK 500 ASN A 86 150.48 80.77 REMARK 500 ALA A 100 56.85 -145.95 REMARK 500 ASN A 139 -139.20 -163.07 REMARK 500 TYR B 23 -137.34 -128.54 REMARK 500 TYR B 48 -160.90 62.87 REMARK 500 ASN B 57 -111.45 72.64 REMARK 500 GLU B 74 132.04 -27.69 REMARK 500 ASN B 75 38.39 -144.65 REMARK 500 ASN B 83 45.82 33.69 REMARK 500 ASN B 86 148.71 77.14 REMARK 500 ALA B 100 59.94 -145.15 REMARK 500 SER B 128 25.35 49.26 REMARK 500 ASN B 139 -150.60 -161.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 901 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASN A 82 OD1 71.6 REMARK 620 3 GLU A 88 OE1 135.8 73.1 REMARK 620 4 ASN A 105 OD1 66.9 136.8 149.0 REMARK 620 5 ASP A 106 O 132.1 144.6 72.6 76.5 REMARK 620 6 ASP A 106 OD1 74.1 97.0 84.7 83.3 71.8 REMARK 620 7 FUC F 5 O3 130.6 115.6 88.7 84.1 71.7 143.2 REMARK 620 8 FUC F 5 O4 74.6 76.6 121.3 81.1 129.8 148.5 61.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 902 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 80 OE1 REMARK 620 2 ASN B 82 OD1 73.1 REMARK 620 3 GLU B 88 OE1 138.6 72.5 REMARK 620 4 ASN B 105 OD1 67.1 138.3 148.8 REMARK 620 5 ASP B 106 O 131.5 141.9 71.4 77.6 REMARK 620 6 ASP B 106 OD1 74.8 92.2 84.1 89.2 72.4 REMARK 620 7 FUC E 5 O3 131.5 117.3 85.3 82.3 71.3 143.7 REMARK 620 8 FUC E 5 O4 75.9 80.6 119.7 78.2 128.8 150.7 61.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 903 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 954 O REMARK 620 2 HOH D 201 O 86.2 REMARK 620 3 HOH D 202 O 86.7 169.3 REMARK 620 4 HOH D 203 O 75.9 86.2 84.4 REMARK 620 5 ASP D 609 OD1 155.4 72.4 116.1 113.5 REMARK 620 6 ASP D 609 OD2 149.2 104.7 77.8 76.2 52.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 904 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 55 O REMARK 620 2 HOH C 185 O 86.1 REMARK 620 3 HOH C 199 O 171.5 87.1 REMARK 620 4 HOH C 200 O 89.2 81.9 84.9 REMARK 620 5 ASP C 609 OD1 115.6 148.8 72.7 118.5 REMARK 620 6 ASP C 609 OD2 75.6 157.2 109.8 84.4 53.9 REMARK 620 7 ASP C 611 OD2 94.7 65.9 87.1 147.2 89.0 128.1 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G1Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P-SELECTIN LECTIN/EGF DOMAINS REMARK 900 RELATED ID: 1G1R RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P-SELECTIN LECTIN/EGF DOMAINS COMPLEXED WITH REMARK 900 SLEX REMARK 900 RELATED ID: 1G1T RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E-SELECTIN DBREF 1G1S A 1 158 UNP P16109 LEM3_HUMAN 42 199 DBREF 1G1S B 1 158 UNP P16109 LEM3_HUMAN 42 199 DBREF 1G1S C 601 619 UNP Q14242 SEPL_HUMAN 42 60 DBREF 1G1S D 601 619 UNP Q14242 SEPL_HUMAN 42 60 SEQADV 1G1S ASP A 158 UNP P16109 GLU 199 CONFLICT SEQADV 1G1S ASP A 159 UNP P16109 CLONING ARTIFACT SEQADV 1G1S ASP A 160 UNP P16109 CLONING ARTIFACT SEQADV 1G1S ASP A 161 UNP P16109 CLONING ARTIFACT SEQADV 1G1S LYS A 162 UNP P16109 CLONING ARTIFACT SEQADV 1G1S ASP B 158 UNP P16109 GLU 199 CONFLICT SEQADV 1G1S ASP B 159 UNP P16109 CLONING ARTIFACT SEQADV 1G1S ASP B 160 UNP P16109 CLONING ARTIFACT SEQADV 1G1S ASP B 161 UNP P16109 CLONING ARTIFACT SEQADV 1G1S LYS B 162 UNP P16109 CLONING ARTIFACT SEQADV 1G1S TYS C 605 UNP Q14242 TYR 46 MODIFIED RESIDUE SEQADV 1G1S TYS C 607 UNP Q14242 TYR 48 MODIFIED RESIDUE SEQADV 1G1S TYS C 610 UNP Q14242 TYR 51 MODIFIED RESIDUE SEQADV 1G1S ARG C 620 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S PRO C 621 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S MET C 622 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S MET C 623 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP C 624 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP C 625 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP C 626 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP C 627 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S LYS C 628 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S TYS D 605 UNP Q14242 TYR 46 MODIFIED RESIDUE SEQADV 1G1S TYS D 607 UNP Q14242 TYR 48 MODIFIED RESIDUE SEQADV 1G1S TYS D 610 UNP Q14242 TYR 51 MODIFIED RESIDUE SEQADV 1G1S ARG D 620 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S PRO D 621 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S MET D 622 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S MET D 623 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP D 624 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP D 625 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP D 626 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S ASP D 627 UNP Q14242 CLONING ARTIFACT SEQADV 1G1S LYS D 628 UNP Q14242 CLONING ARTIFACT SEQRES 1 A 162 TRP THR TYR HIS TYR SER THR LYS ALA TYR SER TRP ASN SEQRES 2 A 162 ILE SER ARG LYS TYR CYS GLN ASN ARG TYR THR ASP LEU SEQRES 3 A 162 VAL ALA ILE GLN ASN LYS ASN GLU ILE ASP TYR LEU ASN SEQRES 4 A 162 LYS VAL LEU PRO TYR TYR SER SER TYR TYR TRP ILE GLY SEQRES 5 A 162 ILE ARG LYS ASN ASN LYS THR TRP THR TRP VAL GLY THR SEQRES 6 A 162 LYS LYS ALA LEU THR ASN GLU ALA GLU ASN TRP ALA ASP SEQRES 7 A 162 ASN GLU PRO ASN ASN LYS ARG ASN ASN GLU ASP CYS VAL SEQRES 8 A 162 GLU ILE TYR ILE LYS SER PRO SER ALA PRO GLY LYS TRP SEQRES 9 A 162 ASN ASP GLU HIS CYS LEU LYS LYS LYS HIS ALA LEU CYS SEQRES 10 A 162 TYR THR ALA SER CYS GLN ASP MET SER CYS SER LYS GLN SEQRES 11 A 162 GLY GLU CYS LEU GLU THR ILE GLY ASN TYR THR CYS SER SEQRES 12 A 162 CYS TYR PRO GLY PHE TYR GLY PRO GLU CYS GLU TYR VAL SEQRES 13 A 162 ARG ASP ASP ASP ASP LYS SEQRES 1 B 162 TRP THR TYR HIS TYR SER THR LYS ALA TYR SER TRP ASN SEQRES 2 B 162 ILE SER ARG LYS TYR CYS GLN ASN ARG TYR THR ASP LEU SEQRES 3 B 162 VAL ALA ILE GLN ASN LYS ASN GLU ILE ASP TYR LEU ASN SEQRES 4 B 162 LYS VAL LEU PRO TYR TYR SER SER TYR TYR TRP ILE GLY SEQRES 5 B 162 ILE ARG LYS ASN ASN LYS THR TRP THR TRP VAL GLY THR SEQRES 6 B 162 LYS LYS ALA LEU THR ASN GLU ALA GLU ASN TRP ALA ASP SEQRES 7 B 162 ASN GLU PRO ASN ASN LYS ARG ASN ASN GLU ASP CYS VAL SEQRES 8 B 162 GLU ILE TYR ILE LYS SER PRO SER ALA PRO GLY LYS TRP SEQRES 9 B 162 ASN ASP GLU HIS CYS LEU LYS LYS LYS HIS ALA LEU CYS SEQRES 10 B 162 TYR THR ALA SER CYS GLN ASP MET SER CYS SER LYS GLN SEQRES 11 B 162 GLY GLU CYS LEU GLU THR ILE GLY ASN TYR THR CYS SER SEQRES 12 B 162 CYS TYR PRO GLY PHE TYR GLY PRO GLU CYS GLU TYR VAL SEQRES 13 B 162 ARG ASP ASP ASP ASP LYS SEQRES 1 C 28 GLN ALA THR GLU TYS GLU TYS LEU ASP TYS ASP PHE LEU SEQRES 2 C 28 PRO GLU THR GLU PRO PRO ARG PRO MET MET ASP ASP ASP SEQRES 3 C 28 ASP LYS SEQRES 1 D 28 GLN ALA THR GLU TYS GLU TYS LEU ASP TYS ASP PHE LEU SEQRES 2 D 28 PRO GLU THR GLU PRO PRO ARG PRO MET MET ASP ASP ASP SEQRES 3 D 28 ASP LYS MODRES 1G1S THR D 616 THR GLYCOSYLATION SITE MODRES 1G1S THR C 616 THR GLYCOSYLATION SITE MODRES 1G1S TYS C 607 TYR O-SULFO-L-TYROSINE MODRES 1G1S TYS C 610 TYR O-SULFO-L-TYROSINE MODRES 1G1S TYS D 605 TYR O-SULFO-L-TYROSINE MODRES 1G1S TYS D 607 TYR O-SULFO-L-TYROSINE MODRES 1G1S TYS D 610 TYR O-SULFO-L-TYROSINE HET TYS C 607 16 HET TYS C 610 16 HET TYS D 605 5 HET TYS D 607 16 HET TYS D 610 16 HET NGA E 1 14 HET NAG E 2 14 HET GAL E 3 11 HET SIA E 4 20 HET FUC E 5 10 HET GAL E 6 11 HET NGA F 1 14 HET NAG F 2 14 HET GAL F 3 11 HET SIA F 4 20 HET FUC F 5 10 HET GAL F 6 11 HET SR A 901 1 HET MRD A 807 8 HET MRD A 811 8 HET SR B 902 1 HET NA B 903 1 HET MRD B 805 8 HET MRD B 806 8 HET MRD B 808 8 HET MRD B 809 8 HET MRD B 810 8 HET NA C 904 1 HETNAM TYS O-SULFO-L-TYROSINE HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SR STRONTIUM ION HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM NA SODIUM ION HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 TYS 5(C9 H11 N O6 S) FORMUL 5 NGA 2(C8 H15 N O6) FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 5 GAL 4(C6 H12 O6) FORMUL 5 SIA 2(C11 H19 N O9) FORMUL 5 FUC 2(C6 H12 O5) FORMUL 7 SR 2(SR 2+) FORMUL 8 MRD 7(C6 H14 O2) FORMUL 11 NA 2(NA 1+) FORMUL 18 HOH *224(H2 O) HELIX 1 1 SER A 11 TYR A 23 1 13 HELIX 2 2 ASN A 31 LEU A 42 1 12 HELIX 3 3 MET A 125 LYS A 129 5 5 HELIX 4 4 SER B 11 TYR B 23 1 13 HELIX 5 5 ASN B 31 LEU B 42 1 12 SHEET 1 A 2 GLY A 131 GLU A 135 0 SHEET 2 A 2 TYR A 140 CYS A 144 -1 O THR A 141 N LEU A 134 SHEET 1 B 2 PHE A 148 TYR A 149 0 SHEET 2 B 2 TYR A 155 VAL A 156 -1 N TYR A 155 O TYR A 149 SHEET 1 C 2 GLY B 131 THR B 136 0 SHEET 2 C 2 ASN B 139 CYS B 144 -1 O ASN B 139 N THR B 136 SHEET 1 D 2 PHE B 148 TYR B 149 0 SHEET 2 D 2 TYR B 155 VAL B 156 -1 N TYR B 155 O TYR B 149 SSBOND 1 CYS A 19 CYS A 117 1555 1555 2.06 SSBOND 2 CYS A 90 CYS A 109 1555 1555 2.04 SSBOND 3 CYS A 122 CYS A 133 1555 1555 2.06 SSBOND 4 CYS A 127 CYS A 142 1555 1555 2.06 SSBOND 5 CYS A 144 CYS A 153 1555 1555 2.09 SSBOND 6 CYS B 19 CYS B 117 1555 1555 2.07 SSBOND 7 CYS B 90 CYS B 109 1555 1555 2.05 SSBOND 8 CYS B 122 CYS B 133 1555 1555 2.05 SSBOND 9 CYS B 127 CYS B 142 1555 1555 2.05 SSBOND 10 CYS B 144 CYS B 153 1555 1555 2.08 LINK C GLU C 606 N TYS C 607 1555 1555 1.33 LINK C TYS C 607 N LEU C 608 1555 1555 1.33 LINK C ASP C 609 N TYS C 610 1555 1555 1.33 LINK C TYS C 610 N ASP C 611 1555 1555 1.32 LINK OG1 THR C 616 C1 NGA E 1 1555 1555 1.43 LINK C TYS D 605 N GLU D 606 1555 1555 1.33 LINK C GLU D 606 N TYS D 607 1555 1555 1.32 LINK C TYS D 607 N LEU D 608 1555 1555 1.33 LINK C ASP D 609 N TYS D 610 1555 1555 1.33 LINK C TYS D 610 N ASP D 611 1555 1555 1.33 LINK OG1 THR D 616 C1 NGA F 1 1555 1555 1.43 LINK O6 NGA E 1 C1 NAG E 2 1555 1555 1.40 LINK O3 NGA E 1 C1 GAL E 6 1555 1555 1.41 LINK O4 NAG E 2 C1 GAL E 3 1555 1555 1.39 LINK O3 NAG E 2 C1 FUC E 5 1555 1555 1.42 LINK O3 GAL E 3 C2 SIA E 4 1555 1555 1.44 LINK O6 NGA F 1 C1 NAG F 2 1555 1555 1.38 LINK O3 NGA F 1 C1 GAL F 6 1555 1555 1.40 LINK O4 NAG F 2 C1 GAL F 3 1555 1555 1.39 LINK O3 NAG F 2 C1 FUC F 5 1555 1555 1.40 LINK O3 GAL F 3 C2 SIA F 4 1555 1555 1.45 LINK OE1 GLU A 80 SR SR A 901 1555 1555 2.85 LINK OD1 ASN A 82 SR SR A 901 1555 1555 2.58 LINK OE1 GLU A 88 SR SR A 901 1555 1555 2.60 LINK OD1 ASN A 105 SR SR A 901 1555 1555 2.54 LINK O ASP A 106 SR SR A 901 1555 1555 2.54 LINK OD1 ASP A 106 SR SR A 901 1555 1555 2.33 LINK SR SR A 901 O3 FUC F 5 1555 1555 2.51 LINK SR SR A 901 O4 FUC F 5 1555 1555 2.76 LINK OE1 GLU B 80 SR SR B 902 1555 1555 2.65 LINK OD1 ASN B 82 SR SR B 902 1555 1555 2.60 LINK OE1 GLU B 88 SR SR B 902 1555 1555 2.58 LINK OD1 ASN B 105 SR SR B 902 1555 1555 2.54 LINK O ASP B 106 SR SR B 902 1555 1555 2.55 LINK OD1 ASP B 106 SR SR B 902 1555 1555 2.22 LINK SR SR B 902 O3 FUC E 5 1555 1555 2.56 LINK SR SR B 902 O4 FUC E 5 1555 1555 2.73 LINK NA NA B 903 O HOH B 954 1555 1555 2.36 LINK NA NA B 903 O HOH D 201 1555 7645 2.28 LINK NA NA B 903 O HOH D 202 1555 7645 2.19 LINK NA NA B 903 O HOH D 203 1555 7645 2.49 LINK NA NA B 903 OD1 ASP D 609 1555 7645 2.54 LINK NA NA B 903 OD2 ASP D 609 1555 7645 2.48 LINK O HOH C 55 NA NA C 904 1555 1555 2.22 LINK O HOH C 185 NA NA C 904 1555 1555 2.41 LINK O HOH C 199 NA NA C 904 1555 1555 2.18 LINK O HOH C 200 NA NA C 904 1555 1555 2.48 LINK OD1 ASP C 609 NA NA C 904 1555 1555 2.46 LINK OD2 ASP C 609 NA NA C 904 1555 1555 2.39 LINK OD2 ASP C 611 NA NA C 904 1555 1555 2.71 CISPEP 1 GLU A 80 PRO A 81 0 0.05 CISPEP 2 GLU B 80 PRO B 81 0 -0.49 CRYST1 63.445 96.756 187.289 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005339 0.00000