HEADER HYDROLASE 26-OCT-00 1G42 TITLE STRUCTURE OF 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE (LINB) TITLE 2 FROM SPHINGOMONAS PAUCIMOBILIS COMPLEXED WITH 1,2-DICHLOROPROPANE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-TCDN CHLOROHYDROLASE; COMPND 5 EC: 3.8.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPHINGOMONAS PAUCIMOBILIS; SOURCE 3 ORGANISM_TAXID: 13689; SOURCE 4 GENE: LINB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HB101; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMLBH6 KEYWDS LINB DEHALOGENASE ALPHA/BETA-HYDROLASE HALOCARBONS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.J.OAKLEY,Z.PROKOP,M.BOHAC,J.KMUNICEK,T.JEDLICKA,M.MONINCOVA,I.KUTA- AUTHOR 2 SMATANOVA,Y.NAGATA,J.DAMBORSKY,M.C.J.WILCE REVDAT 5 09-AUG-23 1G42 1 REMARK SEQADV LINK REVDAT 4 24-FEB-09 1G42 1 VERSN REVDAT 3 01-APR-03 1G42 1 JRNL REVDAT 2 26-JUN-02 1G42 1 JRNL REVDAT 1 26-OCT-01 1G42 0 JRNL AUTH A.J.OAKLEY,Z.PROKOP,M.BOHAC,J.KMUNICEK,T.JEDLICKA, JRNL AUTH 2 M.MONINCOVA,I.KUTA-SMATANOVA,Y.NAGATA,J.DAMBORSKY,M.C.WILCE JRNL TITL EXPLORING THE STRUCTURE AND ACTIVITY OF HALOALKANE JRNL TITL 2 DEHALOGENASE FROM SPHINGOMONAS PAUCIMOBILIS UT26: EVIDENCE JRNL TITL 3 FOR PRODUCT- AND WATER-MEDIATED INHIBITION. JRNL REF BIOCHEMISTRY V. 41 4847 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 11939779 JRNL DOI 10.1021/BI015734I REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.MAREK,J.VEVODOVA,I.K.SMATANOVA,Y.NAGATA,L.A.SVENSSON, REMARK 1 AUTH 2 J.NEWMAN,M.TAKAGI,J.DAMBORSKY REMARK 1 TITL CRYSTAL STRUCTURE OF THE HALOALKANE DEHALOGENASE FROM REMARK 1 TITL 2 SPHINGOMONAS PAUCIMOBILIS UT26 REMARK 1 REF BIOCHEMISTRY V. 39 14082 2000 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI001539C REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1468372.720 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 24803 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1265 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3831 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 194 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2324 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 407 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.32000 REMARK 3 B22 (A**2) : -0.25000 REMARK 3 B33 (A**2) : 1.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.14 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.860 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 60.67 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : ACY.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CP.TOP REMARK 3 TOPOLOGY FILE 3 : ACY.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1G42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1000012206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NI MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55091 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 2.210 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.06 REMARK 200 R MERGE FOR SHELL (I) : 0.24100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1CV2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.9, 18-20%(W/V) PEG REMARK 280 6000, 0.2 M CALCIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 25.40000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.40000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS THE FUNCTIONAL MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 6 CD CE NZ REMARK 480 GLU A 10 CD OE1 OE2 REMARK 480 GLU A 15 CD OE1 OE2 REMARK 480 GLU A 78 OE1 OE2 REMARK 480 GLU A 94 OE2 REMARK 480 GLU A 145 CD OE1 OE2 REMARK 480 GLN A 146 CG CD OE1 NE2 REMARK 480 GLN A 157 CG CD OE1 NE2 REMARK 480 ARG A 225 CD NE CZ NH1 NH2 REMARK 480 GLU A 233 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 32 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 8 -79.63 -63.54 REMARK 500 PRO A 39 50.24 -109.89 REMARK 500 THR A 40 -155.90 -98.01 REMARK 500 SER A 41 -169.70 -162.46 REMARK 500 ASP A 108 -127.22 49.20 REMARK 500 GLU A 132 61.86 37.86 REMARK 500 ARG A 155 31.50 -83.04 REMARK 500 ALA A 247 -72.42 -150.31 REMARK 500 ALA A 271 -90.16 -102.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 149 OD1 REMARK 620 2 GLN A 152 OE1 93.2 REMARK 620 3 HOH A 723 O 102.7 67.7 REMARK 620 4 HOH A 763 O 171.8 91.4 72.8 REMARK 620 5 HOH A 987 O 93.5 89.9 152.8 93.3 REMARK 620 6 HOH A1054 O 94.2 160.7 127.5 83.6 71.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 165 OE1 REMARK 620 2 ASP A 166 OD1 92.7 REMARK 620 3 ASP A 166 OD2 101.4 52.6 REMARK 620 4 PRO A 175 O 175.0 88.9 83.3 REMARK 620 5 ILE A 178 O 93.4 151.6 151.4 83.0 REMARK 620 6 HOH A 710 O 91.4 73.0 124.3 84.5 79.2 REMARK 620 7 HOH A 804 O 89.6 129.5 77.5 93.1 78.3 157.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CP2 A 703 CL1 REMARK 620 2 CP2 A 703 CL5 68.7 REMARK 620 3 CP2 A 703 CL5 73.4 124.6 REMARK 620 4 CP2 A 703 CL1 91.7 73.4 68.7 REMARK 620 5 HOH A 764 O 91.1 73.2 146.6 142.8 REMARK 620 6 HOH A 764 O 142.8 146.6 73.2 91.1 108.3 REMARK 620 7 HOH A1082 O 79.1 131.9 75.2 143.9 72.8 77.1 REMARK 620 8 HOH A1082 O 143.9 75.2 131.9 79.1 77.1 72.8 127.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CP2 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CP2 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CP2 A 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G5F RELATED DB: PDB REMARK 900 STRUCTURE OF LINB COMPLEXED WITH 1,2-DICHLOROETHANE REMARK 900 RELATED ID: 1G4H RELATED DB: PDB REMARK 900 LINB COMPLEXED WITH BUTAN-1-OL DBREF 1G42 A 1 296 UNP P51698 LINB_PSEPA 1 296 SEQADV 1G42 2MR A 291 UNP P51698 ARG 291 MODIFIED RESIDUE SEQRES 1 A 296 MET SER LEU GLY ALA LYS PRO PHE GLY GLU LYS LYS PHE SEQRES 2 A 296 ILE GLU ILE LYS GLY ARG ARG MET ALA TYR ILE ASP GLU SEQRES 3 A 296 GLY THR GLY ASP PRO ILE LEU PHE GLN HIS GLY ASN PRO SEQRES 4 A 296 THR SER SER TYR LEU TRP ARG ASN ILE MET PRO HIS CYS SEQRES 5 A 296 ALA GLY LEU GLY ARG LEU ILE ALA CYS ASP LEU ILE GLY SEQRES 6 A 296 MET GLY ASP SER ASP LYS LEU ASP PRO SER GLY PRO GLU SEQRES 7 A 296 ARG TYR ALA TYR ALA GLU HIS ARG ASP TYR LEU ASP ALA SEQRES 8 A 296 LEU TRP GLU ALA LEU ASP LEU GLY ASP ARG VAL VAL LEU SEQRES 9 A 296 VAL VAL HIS ASP TRP GLY SER ALA LEU GLY PHE ASP TRP SEQRES 10 A 296 ALA ARG ARG HIS ARG GLU ARG VAL GLN GLY ILE ALA TYR SEQRES 11 A 296 MET GLU ALA ILE ALA MET PRO ILE GLU TRP ALA ASP PHE SEQRES 12 A 296 PRO GLU GLN ASP ARG ASP LEU PHE GLN ALA PHE ARG SER SEQRES 13 A 296 GLN ALA GLY GLU GLU LEU VAL LEU GLN ASP ASN VAL PHE SEQRES 14 A 296 VAL GLU GLN VAL LEU PRO GLY LEU ILE LEU ARG PRO LEU SEQRES 15 A 296 SER GLU ALA GLU MET ALA ALA TYR ARG GLU PRO PHE LEU SEQRES 16 A 296 ALA ALA GLY GLU ALA ARG ARG PRO THR LEU SER TRP PRO SEQRES 17 A 296 ARG GLN ILE PRO ILE ALA GLY THR PRO ALA ASP VAL VAL SEQRES 18 A 296 ALA ILE ALA ARG ASP TYR ALA GLY TRP LEU SER GLU SER SEQRES 19 A 296 PRO ILE PRO LYS LEU PHE ILE ASN ALA GLU PRO GLY ALA SEQRES 20 A 296 LEU THR THR GLY ARG MET ARG ASP PHE CYS ARG THR TRP SEQRES 21 A 296 PRO ASN GLN THR GLU ILE THR VAL ALA GLY ALA HIS PHE SEQRES 22 A 296 ILE GLN GLU ASP SER PRO ASP GLU ILE GLY ALA ALA ILE SEQRES 23 A 296 ALA ALA PHE VAL 2MR ARG LEU ARG PRO ALA MODRES 1G42 2MR A 291 ARG N3, N4-DIMETHYLARGININE HET 2MR A 291 13 HET ACT A 501 4 HET CA A 601 1 HET CA A 602 1 HET CA A 603 1 HET CL A 604 1 HET CP2 A 701 5 HET CP2 A 702 5 HET CP2 A 703 5 HETNAM 2MR N3, N4-DIMETHYLARGININE HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM CP2 1,2-DICHLORO-PROPANE FORMUL 1 2MR C8 H18 N4 O2 FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 CA 3(CA 2+) FORMUL 6 CL CL 1- FORMUL 7 CP2 3(C3 H6 CL2) FORMUL 10 HOH *407(H2 O) HELIX 1 1 SER A 41 ARG A 46 5 6 HELIX 2 2 ILE A 48 ALA A 53 5 6 HELIX 3 3 ALA A 81 LEU A 96 1 16 HELIX 4 4 ASP A 108 HIS A 121 1 14 HELIX 5 5 GLU A 139 PHE A 143 5 5 HELIX 6 6 PRO A 144 GLN A 146 5 3 HELIX 7 7 ASP A 147 ARG A 155 1 9 HELIX 8 8 ALA A 158 LEU A 164 1 7 HELIX 9 9 ASN A 167 GLN A 172 1 6 HELIX 10 10 GLN A 172 LEU A 177 1 6 HELIX 11 11 SER A 183 GLU A 192 1 10 HELIX 12 12 PRO A 193 LEU A 195 5 3 HELIX 13 13 GLY A 198 ALA A 200 5 3 HELIX 14 14 ARG A 201 TRP A 207 1 7 HELIX 15 15 PRO A 208 ILE A 211 5 4 HELIX 16 16 PRO A 217 SER A 232 1 16 HELIX 17 17 THR A 250 ARG A 258 1 9 HELIX 18 18 PHE A 273 ASP A 277 5 5 HELIX 19 19 SER A 278 VAL A 290 1 13 SHEET 1 A 8 LYS A 12 ILE A 16 0 SHEET 2 A 8 ARG A 19 GLU A 26 -1 O ARG A 19 N ILE A 16 SHEET 3 A 8 ARG A 57 CYS A 61 -1 N LEU A 58 O GLU A 26 SHEET 4 A 8 PRO A 31 GLN A 35 1 N ILE A 32 O ARG A 57 SHEET 5 A 8 VAL A 102 HIS A 107 1 O VAL A 103 N LEU A 33 SHEET 6 A 8 VAL A 125 MET A 131 1 N GLN A 126 O VAL A 102 SHEET 7 A 8 LYS A 238 PRO A 245 1 O LEU A 239 N TYR A 130 SHEET 8 A 8 GLN A 263 GLY A 270 1 O THR A 264 N PHE A 240 LINK C VAL A 290 N 2MR A 291 1555 1555 1.33 LINK C 2MR A 291 N ARG A 292 1555 1555 1.33 LINK C2 CP2 A 701 CL1 CP2 A 702 1555 1555 1.82 LINK C2 CP2 A 701 C3 CP2 A 702 1555 1555 1.30 LINK C3 CP2 A 701 C2 CP2 A 702 1555 1555 1.78 LINK C3 CP2 A 701 CL5 CP2 A 702 1555 1555 1.91 LINK C3 CP2 A 701 C4 CP2 A 702 1555 1555 1.32 LINK C4 CP2 A 701 C3 CP2 A 702 1555 1555 1.49 LINK CL5 CP2 A 701 C3 CP2 A 702 1555 1555 2.03 LINK CL1 CP2 A 701 C2 CP2 A 702 1555 1555 1.74 LINK OD1 ASP A 149 CA CA A 603 1555 1555 2.16 LINK OE1 GLN A 152 CA CA A 603 1555 1555 2.42 LINK OE1 GLN A 165 CA CA A 602 2565 1555 2.40 LINK OD1 ASP A 166 CA CA A 602 2565 1555 2.36 LINK OD2 ASP A 166 CA CA A 602 2565 1555 2.57 LINK O PRO A 175 CA CA A 602 1555 1555 2.38 LINK O ILE A 178 CA CA A 602 1555 1555 2.41 LINK CA CA A 601 CL1 CP2 A 703 1555 1555 2.59 LINK CA CA A 601 CL5 CP2 A 703 1555 1555 2.59 LINK CA CA A 601 CL5 CP2 A 703 1555 2655 2.59 LINK CA CA A 601 CL1 CP2 A 703 1555 2655 2.59 LINK CA CA A 601 O HOH A 764 1555 1555 2.51 LINK CA CA A 601 O HOH A 764 1555 2655 2.51 LINK CA CA A 601 O HOH A1082 1555 1555 2.48 LINK CA CA A 601 O HOH A1082 1555 2655 2.48 LINK CA CA A 602 O HOH A 710 1555 1555 2.37 LINK CA CA A 602 O HOH A 804 1555 2565 2.34 LINK CA CA A 603 O HOH A 723 1555 1555 2.07 LINK CA CA A 603 O HOH A 763 1555 4456 2.17 LINK CA CA A 603 O HOH A 987 1555 1555 2.21 LINK CA CA A 603 O HOH A1054 1555 4456 2.33 CISPEP 1 ASN A 38 PRO A 39 0 0.02 CISPEP 2 ASP A 73 PRO A 74 0 0.05 CISPEP 3 THR A 216 PRO A 217 0 -0.19 CISPEP 4 GLU A 244 PRO A 245 0 0.36 SITE 1 AC1 4 GLU A 139 ALA A 214 GLY A 215 ARG A 258 SITE 1 AC2 3 CP2 A 703 HOH A 764 HOH A1082 SITE 1 AC3 6 GLN A 165 ASP A 166 PRO A 175 ILE A 178 SITE 2 AC3 6 HOH A 710 HOH A 804 SITE 1 AC4 6 ASP A 149 GLN A 152 HOH A 723 HOH A 763 SITE 2 AC4 6 HOH A 987 HOH A1054 SITE 1 AC5 5 ASN A 38 TRP A 109 PHE A 169 PRO A 208 SITE 2 AC5 5 HOH A 806 SITE 1 AC6 3 LEU A 177 HIS A 272 CP2 A 702 SITE 1 AC7 6 ASP A 108 VAL A 173 LEU A 177 HIS A 272 SITE 2 AC7 6 CP2 A 701 HOH A 806 SITE 1 AC8 5 ASP A 30 CA A 601 HOH A 764 HOH A 898 SITE 2 AC8 5 HOH A1082 CRYST1 50.800 72.000 73.300 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013643 0.00000