HEADER TRANSLATION 02-NOV-00 1G5V TITLE SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF THE HUMAN SMN PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SURVIVAL MOTOR NEURON PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TUDOR DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9D; SOURCE 11 EXPRESSION_SYSTEM_GENE: EXPRESSED AS FUSION PROTEIN WITH N-TERMINAL SOURCE 12 HIS6-GST AND TEV CLEAVAGE SITE KEYWDS MRNA PROCESSING, TRANSLATION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR P.SELENKO,R.SPRANGERS,G.STIER,D.BUEHLER,U.FISCHER,M.SATTLER REVDAT 5 01-MAY-24 1G5V 1 REMARK REVDAT 4 05-FEB-20 1G5V 1 REMARK REVDAT 3 24-FEB-09 1G5V 1 VERSN REVDAT 2 01-APR-03 1G5V 1 JRNL REVDAT 1 02-MAY-01 1G5V 0 JRNL AUTH P.SELENKO,R.SPRANGERS,G.STIER,D.BUHLER,U.FISCHER,M.SATTLER JRNL TITL SMN TUDOR DOMAIN STRUCTURE AND ITS INTERACTION WITH THE SM JRNL TITL 2 PROTEINS. JRNL REF NAT.STRUCT.BIOL. V. 8 27 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11135666 JRNL DOI 10.1038/83014 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CNS 0.3 REMARK 3 AUTHORS : BRUKER (XWINNMR), BRUENGER ET AL. ACTA REMARK 3 CRYSTALLOGR.D BIOL. CRYSTALLOGR. 54, 905-21 (1998) REMARK 3 (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1402 UNAMBIGUOUS NOE DISTANCE REMARK 3 RESTRAINTS 50 HYDROGEN BOND RESTRAINTS 44 HN-N DIPOLAR COUPLINGS REMARK 4 REMARK 4 1G5V COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1000012271. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 20MM PHOSPHATE 30MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM 15N; 20MM PHOSPHATE REMARK 210 BUFFER PH 6.3; 30MM NACL; 5MM REMARK 210 DTT; 1.0 MM 15N,13C; 20MM REMARK 210 PHOSPHATE BUFFER PH 6.3; 30MM REMARK 210 NACL; 5MM DTT; 1.0 MM 15N,13C; REMARK 210 20MM PHOSPHATE BUFFER PH 6.3; REMARK 210 30MM NACL; 5MM DTT REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; HNHA; IPAP REMARK 210 (DIPOLAR COUPLINGS) REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, XEASY REMARK 210 METHOD USED : MIXED TORSION AND CARTESIAN REMARK 210 ANGLE DYNAMICS SIMULATED REMARK 210 ANNEALING PROTOCOL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : BACK CALCULATED DATA AGREE WITH REMARK 210 EXPERIMENTAL NOESY SPECTRUM, REMARK 210 STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY,STRUCTURES REMARK 210 WITH FAVORABLE NON-BOND ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 LYS A 82 REMARK 465 LYS A 83 REMARK 465 ASN A 84 REMARK 465 THR A 85 REMARK 465 ALA A 86 REMARK 465 ALA A 87 REMARK 465 SER A 88 REMARK 465 LEU A 89 REMARK 465 CYS A 146 REMARK 465 GLU A 147 REMARK 465 VAL A 148 REMARK 465 ALA A 149 REMARK 465 ASN A 150 REMARK 465 ASN A 151 REMARK 465 ILE A 152 REMARK 465 GLU A 153 REMARK 465 GLN A 154 REMARK 465 ASN A 155 REMARK 465 ALA A 156 REMARK 465 GLN A 157 REMARK 465 GLU A 158 REMARK 465 ASN A 159 REMARK 465 GLU A 160 REMARK 465 ASN A 161 REMARK 465 GLU A 162 REMARK 465 SER A 163 REMARK 465 GLN A 164 REMARK 465 VAL A 165 REMARK 465 SER A 166 REMARK 465 THR A 167 REMARK 465 ASP A 168 REMARK 465 GLU A 169 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 91 97.53 59.28 REMARK 500 1 THR A 128 106.23 -57.48 REMARK 500 1 PRO A 144 -179.61 -64.57 REMARK 500 2 GLN A 91 -130.60 -75.60 REMARK 500 2 CYS A 98 -164.74 -125.75 REMARK 500 2 PHE A 118 -9.02 -57.49 REMARK 500 2 LYS A 119 -72.52 -51.74 REMARK 500 2 PRO A 144 93.37 -66.99 REMARK 500 3 LYS A 119 -72.15 -68.80 REMARK 500 3 THR A 128 98.42 -61.98 REMARK 500 3 PRO A 144 -79.10 -56.72 REMARK 500 4 CYS A 98 -162.54 -129.09 REMARK 500 5 GLN A 91 123.94 65.08 REMARK 500 5 CYS A 98 -155.91 -136.43 REMARK 500 5 ASP A 105 -76.97 -117.23 REMARK 500 5 LYS A 119 -60.62 -99.93 REMARK 500 5 GLU A 121 56.31 38.87 REMARK 500 5 TYR A 130 -95.08 -115.28 REMARK 500 6 CYS A 98 -154.79 -136.26 REMARK 500 6 SER A 103 36.54 -97.36 REMARK 500 6 LYS A 119 -75.40 -51.97 REMARK 500 7 CYS A 98 -165.13 -126.09 REMARK 500 7 ASP A 105 -1.88 -144.88 REMARK 500 7 ILE A 113 104.97 -58.55 REMARK 500 7 LYS A 119 -73.98 -81.79 REMARK 500 7 TYR A 130 -94.12 -114.72 REMARK 500 8 GLN A 91 133.03 65.68 REMARK 500 8 CYS A 98 -161.43 -124.99 REMARK 500 8 ASP A 105 -70.74 -126.94 REMARK 500 8 ILE A 113 101.10 -59.01 REMARK 500 8 ARG A 120 -90.74 -84.51 REMARK 500 8 GLU A 121 55.60 176.86 REMARK 500 8 CYS A 123 135.92 -172.03 REMARK 500 9 CYS A 98 -158.76 -135.48 REMARK 500 9 GLU A 104 -60.94 -90.51 REMARK 500 9 THR A 128 -88.38 -53.47 REMARK 500 10 GLN A 91 -151.75 50.63 REMARK 500 10 CYS A 98 -169.04 -121.90 REMARK 500 10 SER A 103 35.63 -84.55 REMARK 500 10 ILE A 113 109.72 -59.20 REMARK 500 10 LYS A 119 -71.75 -69.94 REMARK 500 10 GLU A 121 74.03 52.48 REMARK 500 10 THR A 128 95.70 -62.17 REMARK 500 10 PRO A 144 -162.59 -73.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4899 RELATED DB: BMRB DBREF 1G5V A 82 169 UNP Q16637 SMN_HUMAN 82 169 SEQRES 1 A 88 LYS LYS ASN THR ALA ALA SER LEU GLN GLN TRP LYS VAL SEQRES 2 A 88 GLY ASP LYS CYS SER ALA ILE TRP SER GLU ASP GLY CYS SEQRES 3 A 88 ILE TYR PRO ALA THR ILE ALA SER ILE ASP PHE LYS ARG SEQRES 4 A 88 GLU THR CYS VAL VAL VAL TYR THR GLY TYR GLY ASN ARG SEQRES 5 A 88 GLU GLU GLN ASN LEU SER ASP LEU LEU SER PRO ILE CYS SEQRES 6 A 88 GLU VAL ALA ASN ASN ILE GLU GLN ASN ALA GLN GLU ASN SEQRES 7 A 88 GLU ASN GLU SER GLN VAL SER THR ASP GLU HELIX 1 1 LEU A 138 ASP A 140 5 3 SHEET 1 B1 1 GLY A 95 ILE A 101 0 SHEET 1 B2 1 ILE A 108 PHE A 118 0 SHEET 1 B3 1 THR A 122 TYR A 127 0 SHEET 1 B4 1 ASN A 132 ASP A 140 0 SHEET 1 B5 1 LEU A 142 SER A 143 0 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1