HEADER OXIDOREDUCTASE/ELECTRON TRANSPORT 08-MAY-00 1GAQ TITLE CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN FERREDOXIN AND FERREDOXIN- TITLE 2 NADP+ REDUCTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN-NADP+ REDUCTASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: FNR; COMPND 5 EC: 1.18.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: FERREDOXIN I; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: FD; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_TAXID: 4577; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PQE60; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 9 ORGANISM_TAXID: 4577; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE/ELECTRON TRANSPORT, OXIDOREDUCTASE-ELECTRON TRANSPORT KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KURISU,M.KUSUNOKI,T.HASE REVDAT 4 27-DEC-23 1GAQ 1 REMARK LINK REVDAT 3 24-FEB-09 1GAQ 1 VERSN REVDAT 2 01-APR-03 1GAQ 1 JRNL REVDAT 1 07-FEB-01 1GAQ 0 JRNL AUTH G.KURISU,M.KUSUNOKI,E.KATOH,T.YAMAZAKI,K.TESHIMA,Y.ONDA, JRNL AUTH 2 Y.KIMATA-ARIGA,T.HASE JRNL TITL STRUCTURE OF THE ELECTRON TRANSFER COMPLEX BETWEEN JRNL TITL 2 FERREDOXIN AND FERREDOXIN-NADP(+) REDUCTASE. JRNL REF NAT.STRUCT.BIOL. V. 8 117 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11175898 JRNL DOI 10.1038/84097 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1246520.540 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 22761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1152 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3482 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 181 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.40000 REMARK 3 B22 (A**2) : 4.23000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.48 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.360 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.310 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.810 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.590 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 30.47 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GAQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-00. REMARK 100 THE DEPOSITION ID IS D_1000005005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, TRIS, SODIUM CHLORIDE, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.53500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.83000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.70500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.83000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.53500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.70500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 ARG A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 ALA A 7 REMARK 465 VAL A 8 REMARK 465 GLU A 9 REMARK 465 ALA A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 LYS A 15 REMARK 465 ALA A 16 REMARK 465 LYS A 17 REMARK 465 LYS A 18 REMARK 465 ILE C 1 REMARK 465 ARG C 2 REMARK 465 ALA C 3 REMARK 465 GLN C 4 REMARK 465 ALA C 5 REMARK 465 SER C 6 REMARK 465 ALA C 7 REMARK 465 VAL C 8 REMARK 465 GLU C 9 REMARK 465 ALA C 10 REMARK 465 PRO C 11 REMARK 465 ALA C 12 REMARK 465 THR C 13 REMARK 465 ALA C 14 REMARK 465 LYS C 15 REMARK 465 ALA C 16 REMARK 465 LYS C 17 REMARK 465 LYS C 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY C 55 N - CA - C ANGL. DEV. = 16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 25 -71.78 -70.66 REMARK 500 GLU A 36 73.02 -171.28 REMARK 500 ASN A 45 106.22 -160.04 REMARK 500 ASP A 51 -1.17 -51.88 REMARK 500 GLN A 74 -169.71 -72.76 REMARK 500 LYS A 85 51.07 -65.15 REMARK 500 ASN A 86 5.77 -163.92 REMARK 500 ALA A 124 -9.50 -159.39 REMARK 500 THR A 172 3.92 -59.47 REMARK 500 PHE A 185 -58.60 -144.36 REMARK 500 PHE A 186 10.03 -63.01 REMARK 500 ASP A 191 6.82 -155.52 REMARK 500 ALA A 223 65.10 -177.56 REMARK 500 PRO A 224 0.12 -60.94 REMARK 500 ARG A 228 110.68 -163.55 REMARK 500 VAL A 233 87.40 -69.32 REMARK 500 GLU A 236 44.38 -107.39 REMARK 500 ASN A 239 -127.14 -103.46 REMARK 500 ALA A 240 -103.01 -53.50 REMARK 500 ALA A 241 57.83 -66.75 REMARK 500 LYS A 255 -33.52 -36.57 REMARK 500 LEU A 262 31.18 -64.77 REMARK 500 LYS A 263 22.25 -152.69 REMARK 500 LEU A 274 109.68 -54.74 REMARK 500 GLU A 290 10.53 -59.84 REMARK 500 ASP A 292 -72.23 -118.32 REMARK 500 ILE A 294 -166.95 -65.17 REMARK 500 TRP A 296 -56.32 -26.89 REMARK 500 GLU A 312 75.16 -162.58 REMARK 500 THR B 2 90.66 174.92 REMARK 500 PRO B 10 9.06 -65.07 REMARK 500 GLU B 13 88.17 -174.63 REMARK 500 LEU B 16 -168.55 -51.13 REMARK 500 GLN B 17 70.36 -156.90 REMARK 500 ASP B 21 43.10 -85.47 REMARK 500 SER B 38 -89.55 -135.14 REMARK 500 CYS B 44 -169.27 -124.79 REMARK 500 VAL B 52 -108.40 -148.57 REMARK 500 GLN B 61 -84.87 -41.44 REMARK 500 SER B 62 -51.72 71.75 REMARK 500 ASP B 65 -155.53 -83.84 REMARK 500 ASP B 66 -89.81 -62.40 REMARK 500 THR B 76 -28.44 -33.53 REMARK 500 GLU B 94 28.65 -148.73 REMARK 500 LEU B 95 -134.81 -172.50 REMARK 500 THR B 96 83.52 64.72 REMARK 500 SER C 20 145.65 -176.18 REMARK 500 GLN C 23 127.46 -36.66 REMARK 500 ASN C 30 77.06 35.49 REMARK 500 GLU C 56 118.86 72.29 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 99 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 39 SG REMARK 620 2 FES B 99 S1 114.3 REMARK 620 3 FES B 99 S2 119.4 104.2 REMARK 620 4 CYS B 44 SG 97.0 97.6 122.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 99 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 47 SG REMARK 620 2 FES B 99 S1 124.8 REMARK 620 3 FES B 99 S2 114.4 104.5 REMARK 620 4 CYS B 77 SG 103.5 116.4 87.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 99 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 321 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GAW RELATED DB: PDB REMARK 900 FERREDOXIN FREE FERREDOXIN-NADP+ REDUCTASE SOLVED INDEPENDENTLY DBREF 1GAQ A 1 314 UNP Q9SLP6 Q9SLP6_MAIZE 42 355 DBREF 1GAQ C 1 314 UNP Q9SLP6 Q9SLP6_MAIZE 42 355 DBREF 1GAQ B 1 98 UNP P27787 FER1_MAIZE 53 150 SEQRES 1 A 314 ILE ARG ALA GLN ALA SER ALA VAL GLU ALA PRO ALA THR SEQRES 2 A 314 ALA LYS ALA LYS LYS GLU SER LYS LYS GLN GLU GLU GLY SEQRES 3 A 314 VAL VAL THR ASN LEU TYR LYS PRO LYS GLU PRO TYR VAL SEQRES 4 A 314 GLY ARG CYS LEU LEU ASN THR LYS ILE THR GLY ASP ASP SEQRES 5 A 314 ALA PRO GLY GLU THR TRP HIS MET VAL PHE SER THR GLU SEQRES 6 A 314 GLY LYS ILE PRO TYR ARG GLU GLY GLN SER ILE GLY VAL SEQRES 7 A 314 ILE ALA ASP GLY VAL ASP LYS ASN GLY LYS PRO HIS LYS SEQRES 8 A 314 VAL ARG LEU TYR SER ILE ALA SER SER ALA ILE GLY ASP SEQRES 9 A 314 PHE GLY ASP SER LYS THR VAL SER LEU CYS VAL LYS ARG SEQRES 10 A 314 LEU ILE TYR THR ASN ASP ALA GLY GLU ILE VAL LYS GLY SEQRES 11 A 314 VAL CYS SER ASN PHE LEU CYS ASP LEU GLN PRO GLY ASP SEQRES 12 A 314 ASN VAL GLN ILE THR GLY PRO VAL GLY LYS GLU MET LEU SEQRES 13 A 314 MET PRO LYS ASP PRO ASN ALA THR ILE ILE MET LEU ALA SEQRES 14 A 314 THR GLY THR GLY ILE ALA PRO PHE ARG SER PHE LEU TRP SEQRES 15 A 314 LYS MET PHE PHE GLU LYS HIS ASP ASP TYR LYS PHE ASN SEQRES 16 A 314 GLY LEU GLY TRP LEU PHE LEU GLY VAL PRO THR SER SER SEQRES 17 A 314 SER LEU LEU TYR LYS GLU GLU PHE GLY LYS MET LYS GLU SEQRES 18 A 314 ARG ALA PRO GLU ASN PHE ARG VAL ASP TYR ALA VAL SER SEQRES 19 A 314 ARG GLU GLN THR ASN ALA ALA GLY GLU ARG MET TYR ILE SEQRES 20 A 314 GLN THR ARG MET ALA GLU TYR LYS GLU GLU LEU TRP GLU SEQRES 21 A 314 LEU LEU LYS LYS ASP ASN THR TYR VAL TYR MET CYS GLY SEQRES 22 A 314 LEU LYS GLY MET GLU LYS GLY ILE ASP ASP ILE MET VAL SEQRES 23 A 314 SER LEU ALA GLU LYS ASP GLY ILE ASP TRP PHE ASP TYR SEQRES 24 A 314 LYS LYS GLN LEU LYS ARG GLY ASP GLN TRP ASN VAL GLU SEQRES 25 A 314 VAL TYR SEQRES 1 B 98 ALA THR TYR ASN VAL LYS LEU ILE THR PRO GLU GLY GLU SEQRES 2 B 98 VAL GLU LEU GLN VAL PRO ASP ASP VAL TYR ILE LEU ASP SEQRES 3 B 98 GLN ALA GLU GLU ASP GLY ILE ASP LEU PRO TYR SER CYS SEQRES 4 B 98 ARG ALA GLY SER CYS SER SER CYS ALA GLY LYS VAL VAL SEQRES 5 B 98 SER GLY SER VAL ASP GLN SER ASP GLN SER TYR LEU ASP SEQRES 6 B 98 ASP GLY GLN ILE ALA ASP GLY TRP VAL LEU THR CYS HIS SEQRES 7 B 98 ALA TYR PRO THR SER ASP VAL VAL ILE GLU THR HIS LYS SEQRES 8 B 98 GLU GLU GLU LEU THR GLY ALA SEQRES 1 C 314 ILE ARG ALA GLN ALA SER ALA VAL GLU ALA PRO ALA THR SEQRES 2 C 314 ALA LYS ALA LYS LYS GLU SER LYS LYS GLN GLU GLU GLY SEQRES 3 C 314 VAL VAL THR ASN LEU TYR LYS PRO LYS GLU PRO TYR VAL SEQRES 4 C 314 GLY ARG CYS LEU LEU ASN THR LYS ILE THR GLY ASP ASP SEQRES 5 C 314 ALA PRO GLY GLU THR TRP HIS MET VAL PHE SER THR GLU SEQRES 6 C 314 GLY LYS ILE PRO TYR ARG GLU GLY GLN SER ILE GLY VAL SEQRES 7 C 314 ILE ALA ASP GLY VAL ASP LYS ASN GLY LYS PRO HIS LYS SEQRES 8 C 314 VAL ARG LEU TYR SER ILE ALA SER SER ALA ILE GLY ASP SEQRES 9 C 314 PHE GLY ASP SER LYS THR VAL SER LEU CYS VAL LYS ARG SEQRES 10 C 314 LEU ILE TYR THR ASN ASP ALA GLY GLU ILE VAL LYS GLY SEQRES 11 C 314 VAL CYS SER ASN PHE LEU CYS ASP LEU GLN PRO GLY ASP SEQRES 12 C 314 ASN VAL GLN ILE THR GLY PRO VAL GLY LYS GLU MET LEU SEQRES 13 C 314 MET PRO LYS ASP PRO ASN ALA THR ILE ILE MET LEU ALA SEQRES 14 C 314 THR GLY THR GLY ILE ALA PRO PHE ARG SER PHE LEU TRP SEQRES 15 C 314 LYS MET PHE PHE GLU LYS HIS ASP ASP TYR LYS PHE ASN SEQRES 16 C 314 GLY LEU GLY TRP LEU PHE LEU GLY VAL PRO THR SER SER SEQRES 17 C 314 SER LEU LEU TYR LYS GLU GLU PHE GLY LYS MET LYS GLU SEQRES 18 C 314 ARG ALA PRO GLU ASN PHE ARG VAL ASP TYR ALA VAL SER SEQRES 19 C 314 ARG GLU GLN THR ASN ALA ALA GLY GLU ARG MET TYR ILE SEQRES 20 C 314 GLN THR ARG MET ALA GLU TYR LYS GLU GLU LEU TRP GLU SEQRES 21 C 314 LEU LEU LYS LYS ASP ASN THR TYR VAL TYR MET CYS GLY SEQRES 22 C 314 LEU LYS GLY MET GLU LYS GLY ILE ASP ASP ILE MET VAL SEQRES 23 C 314 SER LEU ALA GLU LYS ASP GLY ILE ASP TRP PHE ASP TYR SEQRES 24 C 314 LYS LYS GLN LEU LYS ARG GLY ASP GLN TRP ASN VAL GLU SEQRES 25 C 314 VAL TYR HET FAD A 320 53 HET FES B 99 4 HET FAD C 321 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 4 FAD 2(C27 H33 N9 O15 P2) FORMUL 5 FES FE2 S2 FORMUL 7 HOH *133(H2 O) HELIX 1 1 GLY A 130 ASP A 138 1 9 HELIX 2 2 ILE A 174 PHE A 185 1 12 HELIX 3 3 THR A 206 LEU A 210 5 5 HELIX 4 4 TYR A 212 ALA A 223 1 12 HELIX 5 5 TYR A 246 GLU A 253 1 8 HELIX 6 6 TYR A 254 GLU A 260 1 7 HELIX 7 7 GLY A 276 GLU A 290 1 15 HELIX 8 8 ASP A 295 LYS A 304 1 10 HELIX 9 9 ARG A 305 ASP A 307 5 3 HELIX 10 10 TYR B 23 GLU B 29 1 7 HELIX 11 11 GLY B 67 GLY B 72 1 6 HELIX 12 12 GLY C 130 CYS C 137 1 8 HELIX 13 13 ILE C 174 PHE C 186 1 13 HELIX 14 14 THR C 206 LEU C 210 5 5 HELIX 15 15 TYR C 212 ALA C 223 1 12 HELIX 16 16 TYR C 246 GLU C 253 1 8 HELIX 17 17 TYR C 254 LEU C 262 1 9 HELIX 18 18 GLY C 276 ASP C 292 1 17 HELIX 19 19 ASP C 295 ARG C 305 1 11 SHEET 1 A 6 ARG A 93 SER A 96 0 SHEET 2 A 6 SER A 75 ILE A 79 -1 O ILE A 76 N TYR A 95 SHEET 3 A 6 ASN A 144 VAL A 151 -1 O GLN A 146 N ILE A 79 SHEET 4 A 6 TYR A 38 LYS A 47 -1 O TYR A 38 N ILE A 147 SHEET 5 A 6 THR A 57 SER A 63 -1 O HIS A 59 N THR A 46 SHEET 6 A 6 THR A 110 LYS A 116 -1 O VAL A 111 N PHE A 62 SHEET 1 B 2 ILE A 119 THR A 121 0 SHEET 2 B 2 ILE A 127 LYS A 129 -1 N VAL A 128 O TYR A 120 SHEET 1 C 5 PHE A 227 VAL A 233 0 SHEET 2 C 5 LEU A 197 VAL A 204 1 O GLY A 198 N ARG A 228 SHEET 3 C 5 THR A 164 THR A 170 1 O ILE A 165 N TRP A 199 SHEET 4 C 5 THR A 267 LEU A 274 1 N TYR A 268 O THR A 164 SHEET 5 C 5 TRP A 309 TYR A 314 1 O ASN A 310 N MET A 271 SHEET 1 D 3 VAL B 5 LEU B 7 0 SHEET 2 D 3 VAL B 85 THR B 89 1 O VAL B 85 N LYS B 6 SHEET 3 D 3 GLY B 49 LYS B 50 -1 O LYS B 50 N GLU B 88 SHEET 1 E 2 VAL B 56 ASP B 57 0 SHEET 2 E 2 TYR B 80 PRO B 81 -1 O TYR B 80 N ASP B 57 SHEET 1 F 6 ARG C 93 SER C 96 0 SHEET 2 F 6 SER C 75 VAL C 78 -1 N ILE C 76 O TYR C 95 SHEET 3 F 6 ASN C 144 VAL C 151 -1 N THR C 148 O GLY C 77 SHEET 4 F 6 TYR C 38 LYS C 47 -1 O TYR C 38 N ILE C 147 SHEET 5 F 6 THR C 57 SER C 63 -1 N HIS C 59 O THR C 46 SHEET 6 F 6 THR C 110 LYS C 116 -1 O VAL C 111 N PHE C 62 SHEET 1 G 2 ILE C 119 THR C 121 0 SHEET 2 G 2 ILE C 127 LYS C 129 -1 N VAL C 128 O TYR C 120 SHEET 1 H 5 PHE C 227 VAL C 233 0 SHEET 2 H 5 LEU C 197 VAL C 204 1 O GLY C 198 N ARG C 228 SHEET 3 H 5 THR C 164 THR C 170 1 N ILE C 165 O LEU C 197 SHEET 4 H 5 THR C 267 LEU C 274 1 N TYR C 268 O THR C 164 SHEET 5 H 5 TRP C 309 TYR C 314 1 O ASN C 310 N MET C 271 LINK SG CYS B 39 FE2 FES B 99 1555 1555 2.61 LINK SG CYS B 44 FE2 FES B 99 1555 1555 2.52 LINK SG CYS B 47 FE1 FES B 99 1555 1555 2.51 LINK SG CYS B 77 FE1 FES B 99 1555 1555 2.51 CISPEP 1 GLY A 149 PRO A 150 0 0.17 CISPEP 2 GLY C 149 PRO C 150 0 0.19 SITE 1 AC1 21 ARG A 93 LEU A 94 TYR A 95 SER A 96 SITE 2 AC1 21 CYS A 114 VAL A 115 LYS A 116 LEU A 118 SITE 3 AC1 21 TYR A 120 GLY A 130 VAL A 131 CYS A 132 SITE 4 AC1 21 SER A 133 THR A 172 TYR A 314 HOH A 334 SITE 5 AC1 21 HOH A 351 SER B 38 GLU B 94 THR C 121 SITE 6 AC1 21 FAD C 321 SITE 1 AC2 8 SER B 38 CYS B 39 ARG B 40 GLY B 42 SITE 2 AC2 8 SER B 43 CYS B 44 CYS B 47 CYS B 77 SITE 1 AC3 18 FAD A 320 ARG C 93 LEU C 94 TYR C 95 SITE 2 AC3 18 SER C 96 CYS C 114 LYS C 116 LEU C 118 SITE 3 AC3 18 TYR C 120 GLY C 130 VAL C 131 CYS C 132 SITE 4 AC3 18 SER C 133 THR C 172 GLU C 312 TYR C 314 SITE 5 AC3 18 HOH C 348 HOH C 351 CRYST1 57.070 93.410 135.660 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017522 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010705 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007371 0.00000