HEADER TRANSFERASE (FORMYL) 08-DEC-94 1GAR TITLE TOWARDS STRUCTURE-BASED DRUG DESIGN: CRYSTAL STRUCTURE OF A TITLE 2 MULTISUBSTRATE ADDUCT COMPLEX OF GLYCINAMIDE RIBONUCLEOTIDE TITLE 3 TRANSFORMYLASE AT 1.96 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS TRANSFERASE (FORMYL) EXPDTA X-RAY DIFFRACTION AUTHOR I.A.WILSON,C.KLEIN,P.CHEN,J.H.AREVALO REVDAT 3 07-FEB-24 1GAR 1 REMARK REVDAT 2 24-FEB-09 1GAR 1 VERSN REVDAT 1 10-JUL-95 1GAR 0 JRNL AUTH C.KLEIN,P.CHEN,J.H.AREVALO,E.A.STURA,A.MAROLEWSKI, JRNL AUTH 2 M.S.WARREN,S.J.BENKOVIC,I.A.WILSON JRNL TITL TOWARDS STRUCTURE-BASED DRUG DESIGN: CRYSTAL STRUCTURE OF A JRNL TITL 2 MULTISUBSTRATE ADDUCT COMPLEX OF GLYCINAMIDE RIBONUCLEOTIDE JRNL TITL 3 TRANSFORMYLASE AT 1.96 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 249 153 1995 JRNL REFN ISSN 0022-2836 JRNL PMID 7776369 JRNL DOI 10.1006/JMBI.1995.0286 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.CHEN,U.SCHULZE-GAHMEN,E.A.STURA,J.INGLESE,D.L.JOHNSON, REMARK 1 AUTH 2 A.MAROLEWSKI,S.J.BENKOVIC,I.A.WILSON REMARK 1 TITL CRYSTAL STRUCTURE OF GLYCINAMIDE RIBONUCLEOTIDE REMARK 1 TITL 2 TRANSFORMYLASE FROM ESCHERICHIA COLI AT 3.0 ANGSTROMS REMARK 1 TITL 3 RESOLUTION. A TARGET ENZYME FOR CHEMOTHERAPY REMARK 1 REF J.MOL.BIOL. V. 227 283 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 71.6 REMARK 3 NUMBER OF REFLECTIONS : 17365 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3025 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 3.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.500 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 1991 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MULTIWIRE AREA DETECTOR REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22588 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.65000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 123 REMARK 465 ALA A 124 REMARK 465 LEU A 125 REMARK 465 GLU A 126 REMARK 465 ALA A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 LYS B 114 REMARK 465 TYR B 115 REMARK 465 PRO B 116 REMARK 465 GLY B 117 REMARK 465 LEU B 118 REMARK 465 HIS B 119 REMARK 465 THR B 120 REMARK 465 HIS B 121 REMARK 465 ARG B 122 REMARK 465 GLN B 123 REMARK 465 ALA B 124 REMARK 465 LEU B 125 REMARK 465 GLU B 126 REMARK 465 ASN B 127 REMARK 465 GLY B 128 REMARK 465 ALA B 210 REMARK 465 ASP B 211 REMARK 465 GLU B 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 113 CB CG CD REMARK 470 LYS A 114 CB CG CD CE NZ REMARK 470 TYR A 115 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO A 116 CB CG CD REMARK 470 LEU A 118 CB CG CD1 CD2 REMARK 470 HIS A 119 CB CG ND1 CD2 CE1 NE2 REMARK 470 THR A 120 CB OG1 CG2 REMARK 470 HIS A 121 CB CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 122 CA C O CB CG CD NE REMARK 470 ARG A 122 CZ NH1 NH2 REMARK 470 ASN A 127 CB CG OD1 ND2 REMARK 470 PRO B 113 CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 54 NE2 HIS A 54 CD2 -0.085 REMARK 500 HIS A 73 NE2 HIS A 73 CD2 -0.076 REMARK 500 HIS A 99 NE2 HIS A 99 CD2 -0.069 REMARK 500 HIS A 108 NE2 HIS A 108 CD2 -0.072 REMARK 500 HIS A 108 NE2 HIS A 108 CD2 -0.069 REMARK 500 HIS A 132 NE2 HIS A 132 CD2 -0.068 REMARK 500 HIS A 174 NE2 HIS A 174 CD2 -0.075 REMARK 500 HIS B 73 NE2 HIS B 73 CD2 -0.068 REMARK 500 HIS B 99 NE2 HIS B 99 CD2 -0.079 REMARK 500 HIS B 108 NE2 HIS B 108 CD2 -0.075 REMARK 500 HIS B 132 NE2 HIS B 132 CD2 -0.071 REMARK 500 HIS B 192 NE2 HIS B 192 CD2 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 69 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 TRP A 183 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP A 183 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 TRP A 197 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 197 CE2 - CD2 - CG ANGL. DEV. = -5.1 DEGREES REMARK 500 TYR A 208 CA - C - N ANGL. DEV. = -13.2 DEGREES REMARK 500 TYR A 208 O - C - N ANGL. DEV. = 9.7 DEGREES REMARK 500 THR B 23 N - CA - CB ANGL. DEV. = -11.5 DEGREES REMARK 500 ARG B 31 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG B 45 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 90 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP B 160 CA - C - N ANGL. DEV. = -16.8 DEGREES REMARK 500 ARG B 168 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 TYR B 177 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 TRP B 183 CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP B 183 CG - CD1 - NE1 ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP B 183 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP B 197 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP B 197 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 79 64.73 38.87 REMARK 500 ARG A 103 41.31 -143.92 REMARK 500 LEU A 111 -107.76 -95.82 REMARK 500 PRO A 113 -38.41 157.08 REMARK 500 TYR A 115 17.81 -163.91 REMARK 500 PRO A 116 19.90 39.74 REMARK 500 LEU A 118 -78.40 38.80 REMARK 500 HIS A 119 35.94 85.36 REMARK 500 ASP A 129 -78.24 -72.59 REMARK 500 GLU A 130 -156.82 -174.68 REMARK 500 GLU A 131 95.97 51.13 REMARK 500 THR B 23 12.61 -66.57 REMARK 500 ASN B 24 12.60 51.22 REMARK 500 ALA B 79 63.11 33.75 REMARK 500 LEU B 112 52.20 -166.76 REMARK 500 GLU B 131 80.20 -50.89 REMARK 500 ASP B 141 4.07 -64.19 REMARK 500 ASP B 144 -23.43 67.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ASA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: ASB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U89 A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U89 B 213 DBREF 1GAR A 1 212 UNP P08179 PUR3_ECOLI 1 212 DBREF 1GAR B 1 212 UNP P08179 PUR3_ECOLI 1 212 SEQRES 1 A 212 MET ASN ILE VAL VAL LEU ILE SER GLY ASN GLY SER ASN SEQRES 2 A 212 LEU GLN ALA ILE ILE ASP ALA CYS LYS THR ASN LYS ILE SEQRES 3 A 212 LYS GLY THR VAL ARG ALA VAL PHE SER ASN LYS ALA ASP SEQRES 4 A 212 ALA PHE GLY LEU GLU ARG ALA ARG GLN ALA GLY ILE ALA SEQRES 5 A 212 THR HIS THR LEU ILE ALA SER ALA PHE ASP SER ARG GLU SEQRES 6 A 212 ALA TYR ASP ARG GLU LEU ILE HIS GLU ILE ASP MET TYR SEQRES 7 A 212 ALA PRO ASP VAL VAL VAL LEU ALA GLY PHE MET ARG ILE SEQRES 8 A 212 LEU SER PRO ALA PHE VAL SER HIS TYR ALA GLY ARG LEU SEQRES 9 A 212 LEU ASN ILE HIS PRO SER LEU LEU PRO LYS TYR PRO GLY SEQRES 10 A 212 LEU HIS THR HIS ARG GLN ALA LEU GLU ASN GLY ASP GLU SEQRES 11 A 212 GLU HIS GLY THR SER VAL HIS PHE VAL THR ASP GLU LEU SEQRES 12 A 212 ASP GLY GLY PRO VAL ILE LEU GLN ALA LYS VAL PRO VAL SEQRES 13 A 212 PHE ALA GLY ASP SER GLU ASP ASP ILE THR ALA ARG VAL SEQRES 14 A 212 GLN THR GLN GLU HIS ALA ILE TYR PRO LEU VAL ILE SER SEQRES 15 A 212 TRP PHE ALA ASP GLY ARG LEU LYS MET HIS GLU ASN ALA SEQRES 16 A 212 ALA TRP LEU ASP GLY GLN ARG LEU PRO PRO GLN GLY TYR SEQRES 17 A 212 ALA ALA ASP GLU SEQRES 1 B 212 MET ASN ILE VAL VAL LEU ILE SER GLY ASN GLY SER ASN SEQRES 2 B 212 LEU GLN ALA ILE ILE ASP ALA CYS LYS THR ASN LYS ILE SEQRES 3 B 212 LYS GLY THR VAL ARG ALA VAL PHE SER ASN LYS ALA ASP SEQRES 4 B 212 ALA PHE GLY LEU GLU ARG ALA ARG GLN ALA GLY ILE ALA SEQRES 5 B 212 THR HIS THR LEU ILE ALA SER ALA PHE ASP SER ARG GLU SEQRES 6 B 212 ALA TYR ASP ARG GLU LEU ILE HIS GLU ILE ASP MET TYR SEQRES 7 B 212 ALA PRO ASP VAL VAL VAL LEU ALA GLY PHE MET ARG ILE SEQRES 8 B 212 LEU SER PRO ALA PHE VAL SER HIS TYR ALA GLY ARG LEU SEQRES 9 B 212 LEU ASN ILE HIS PRO SER LEU LEU PRO LYS TYR PRO GLY SEQRES 10 B 212 LEU HIS THR HIS ARG GLN ALA LEU GLU ASN GLY ASP GLU SEQRES 11 B 212 GLU HIS GLY THR SER VAL HIS PHE VAL THR ASP GLU LEU SEQRES 12 B 212 ASP GLY GLY PRO VAL ILE LEU GLN ALA LYS VAL PRO VAL SEQRES 13 B 212 PHE ALA GLY ASP SER GLU ASP ASP ILE THR ALA ARG VAL SEQRES 14 B 212 GLN THR GLN GLU HIS ALA ILE TYR PRO LEU VAL ILE SER SEQRES 15 B 212 TRP PHE ALA ASP GLY ARG LEU LYS MET HIS GLU ASN ALA SEQRES 16 B 212 ALA TRP LEU ASP GLY GLN ARG LEU PRO PRO GLN GLY TYR SEQRES 17 B 212 ALA ALA ASP GLU HET U89 A 213 96 HET U89 B 213 96 HETNAM U89 N-[4-[[3-(2,4-DIAMINO-1,6-DIHYDRO-6-OXO-4-PYRIMIDINYL)- HETNAM 2 U89 PROPYL]-[2-((2-OXO-2-((4-PHOSPHORIBOXY)-BUTYL)-AMINO)- HETNAM 3 U89 ETHYL)-THIO-ACETYL]-AMINO]BENZOYL]-1-GLUTAMIC ACID FORMUL 3 U89 2(C27 H38 N7 O12 P S) FORMUL 5 HOH *326(H2 O) HELIX 1 1 SER A 12 LYS A 22 1 11 HELIX 2 2 PHE A 41 ALA A 49 1 9 HELIX 3 3 ALA A 58 ALA A 60 5 3 HELIX 4 4 ARG A 64 TYR A 78 1 15 HELIX 5 5 PRO A 94 HIS A 99 1 6 HELIX 6 6 GLU A 162 ALA A 185 1 24 HELIX 7 7 SER B 12 LYS B 22 1 11 HELIX 8 8 PHE B 41 GLN B 48 1 8 HELIX 9 9 ALA B 58 ALA B 60 5 3 HELIX 10 10 ARG B 64 TYR B 78 1 15 HELIX 11 11 PRO B 94 TYR B 100 1 7 HELIX 12 12 GLU B 162 ALA B 185 1 24 SHEET 1 A 7 VAL A 148 LYS A 153 0 SHEET 2 A 7 GLY A 133 PHE A 138 -1 N VAL A 136 O ILE A 149 SHEET 3 A 7 LEU A 104 HIS A 108 -1 N HIS A 108 O SER A 135 SHEET 4 A 7 VAL A 82 LEU A 85 1 N VAL A 83 O LEU A 105 SHEET 5 A 7 ASN A 2 ILE A 7 1 N VAL A 4 O VAL A 82 SHEET 6 A 7 THR A 29 SER A 35 1 N THR A 29 O ILE A 3 SHEET 7 A 7 ALA A 52 THR A 55 1 N ALA A 52 O VAL A 33 SHEET 1 B 2 LEU A 189 HIS A 192 0 SHEET 2 B 2 ALA A 195 LEU A 198 -1 N TRP A 197 O LYS A 190 SHEET 1 C 7 VAL B 148 LYS B 153 0 SHEET 2 C 7 GLY B 133 PHE B 138 -1 N VAL B 136 O ILE B 149 SHEET 3 C 7 LEU B 104 HIS B 108 -1 N HIS B 108 O SER B 135 SHEET 4 C 7 VAL B 82 LEU B 85 1 N VAL B 83 O LEU B 105 SHEET 5 C 7 ASN B 2 ILE B 7 1 N VAL B 4 O VAL B 82 SHEET 6 C 7 THR B 29 SER B 35 1 N THR B 29 O ILE B 3 SHEET 7 C 7 ALA B 52 THR B 55 1 N ALA B 52 O VAL B 33 SHEET 1 D 2 LEU B 189 HIS B 192 0 SHEET 2 D 2 ALA B 195 LEU B 198 -1 N TRP B 197 O LYS B 190 SITE 1 ASA 3 ASN A 106 HIS A 108 ASP A 144 SITE 1 ASB 3 ASN B 106 HIS B 108 ASP B 144 SITE 1 AC1 27 ASN A 10 GLY A 11 SER A 12 ASN A 13 SITE 2 AC1 27 ARG A 31 ARG A 64 GLY A 87 PHE A 88 SITE 3 AC1 27 MET A 89 ARG A 90 ILE A 91 LEU A 92 SITE 4 AC1 27 VAL A 97 ASN A 106 ILE A 107 HIS A 108 SITE 5 AC1 27 PRO A 109 VAL A 139 THR A 140 ASP A 144 SITE 6 AC1 27 GLN A 170 GLU A 173 HOH A 215 HOH A 216 SITE 7 AC1 27 HOH A 273 HOH A 345 HOH A 367 SITE 1 AC2 31 SER A 59 HOH A 289 ASN B 10 GLY B 11 SITE 2 AC2 31 SER B 12 ASN B 13 ARG B 31 ARG B 64 SITE 3 AC2 31 GLY B 87 PHE B 88 MET B 89 ARG B 90 SITE 4 AC2 31 ILE B 91 LEU B 92 VAL B 97 ASN B 106 SITE 5 AC2 31 ILE B 107 HIS B 108 PRO B 109 VAL B 139 SITE 6 AC2 31 ASP B 144 GLU B 173 HOH B 218 HOH B 222 SITE 7 AC2 31 HOH B 228 HOH B 231 HOH B 260 HOH B 281 SITE 8 AC2 31 HOH B 304 HOH B 340 HOH B 363 CRYST1 75.700 73.300 35.500 90.00 94.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013210 0.000000 0.000993 0.00000 SCALE2 0.000000 0.013643 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028249 0.00000