data_1GBC # _entry.id 1GBC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1GBC pdb_00001gbc 10.2210/pdb1gbc/pdb WWPDB D_1000173492 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GBC _pdbx_database_status.recvd_initial_deposition_date 1995-09-06 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mace, J.E.' 1 'Agard, D.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity. ; J.Mol.Biol. 254 720 736 1995 JMOBAK UK 0022-2836 0070 ? 7500345 10.1006/jmbi.1995.0650 1 'Structural Basis for Broad Specificity in Alpha-Lytic Protease' Biochemistry 30 10388 ? 1991 BICHAW US 0006-2960 0033 ? ? ? 2 'Structural Plasticity Broadens the Specificity of an Engineered Protease' Nature 339 191 ? 1989 NATUAS UK 0028-0836 0006 ? ? ? 3 'Structural Analysis of Specificity: Alpha-Lytic Protease Complexes with Analogues of Reaction Intermediates' Biochemistry 28 7600 ? 1989 BICHAW US 0006-2960 0033 ? ? ? 4 'Serine Protease Mechanism: Structure of an Inhibitory Complex of Alpha-Lytic Protease and a Tightly Bound Peptide Boronic Acid' Biochemistry 27 7609 ? 1987 BICHAW US 0006-2960 0033 ? ? ? 5 'Refined Structure of Alpha-Lytic Protease at 1.7 Angstroms Resolution. Analysis of Hydrogen Bonding and Solvent Structure' J.Mol.Biol. 184 479 ? 1985 JMOBAK UK 0022-2836 0070 ? ? ? 6 'Molecular Structure of the Alpha-Lytic Protease from Myxobacter 495 at 2.8 Angstroms Resolution' J.Mol.Biol. 131 743 ? 1979 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mace, J.E.' 1 ? primary 'Agard, D.A.' 2 ? 1 'Bone, R.' 3 ? 1 'Fujushige, A.' 4 ? 1 'Kettner, C.A.' 5 ? 1 'Agard, D.A.' 6 ? 2 'Bone, R.' 7 ? 2 'Silen, J.L.' 8 ? 2 'Agard, D.A.' 9 ? 3 'Bone, R.' 10 ? 3 'Frank, D.' 11 ? 3 'Kettner, D.' 12 ? 3 'Agard, D.A.' 13 ? 4 'Bone, R.' 14 ? 4 'Shenvi, A.B.' 15 ? 4 'Kettner, C.A.' 16 ? 4 'Agard, D.A.' 17 ? 5 'Fujinaga, M.' 18 ? 5 'Delbaere, L.T.J.' 19 ? 5 'Brayer, G.D.' 20 ? 5 'James, M.N.G.' 21 ? 6 'Brayer, G.D.' 22 ? 6 'Delbaere, L.T.J.' 23 ? 6 'James, M.N.G.' 24 ? # _cell.entry_id 1GBC _cell.length_a 66.160 _cell.length_b 66.160 _cell.length_c 80.240 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1GBC _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ALPHA-LYTIC PROTEASE' 19829.041 1 3.4.21.12 'M190A, G216A' ? ? 2 polymer syn 'METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR' 484.351 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 159 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVA NGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACAGRGDSGGSWITSAGQAQGVMSG ANVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; ;ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVA NGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACAGRGDSGGSWITSAGQAQGVMSG ANVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; A ? 2 'polypeptide(L)' no yes '(MSU)AAP(BLE)' XAAPL P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASN n 1 3 ILE n 1 4 VAL n 1 5 GLY n 1 6 GLY n 1 7 ILE n 1 8 GLU n 1 9 TYR n 1 10 SER n 1 11 ILE n 1 12 ASN n 1 13 ASN n 1 14 ALA n 1 15 SER n 1 16 LEU n 1 17 CYS n 1 18 SER n 1 19 VAL n 1 20 GLY n 1 21 PHE n 1 22 SER n 1 23 VAL n 1 24 THR n 1 25 ARG n 1 26 GLY n 1 27 ALA n 1 28 THR n 1 29 LYS n 1 30 GLY n 1 31 PHE n 1 32 VAL n 1 33 THR n 1 34 ALA n 1 35 GLY n 1 36 HIS n 1 37 CYS n 1 38 GLY n 1 39 THR n 1 40 VAL n 1 41 ASN n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 ARG n 1 46 ILE n 1 47 GLY n 1 48 GLY n 1 49 ALA n 1 50 VAL n 1 51 VAL n 1 52 GLY n 1 53 THR n 1 54 PHE n 1 55 ALA n 1 56 ALA n 1 57 ARG n 1 58 VAL n 1 59 PHE n 1 60 PRO n 1 61 GLY n 1 62 ASN n 1 63 ASP n 1 64 ARG n 1 65 ALA n 1 66 TRP n 1 67 VAL n 1 68 SER n 1 69 LEU n 1 70 THR n 1 71 SER n 1 72 ALA n 1 73 GLN n 1 74 THR n 1 75 LEU n 1 76 LEU n 1 77 PRO n 1 78 ARG n 1 79 VAL n 1 80 ALA n 1 81 ASN n 1 82 GLY n 1 83 SER n 1 84 SER n 1 85 PHE n 1 86 VAL n 1 87 THR n 1 88 VAL n 1 89 ARG n 1 90 GLY n 1 91 SER n 1 92 THR n 1 93 GLU n 1 94 ALA n 1 95 ALA n 1 96 VAL n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 VAL n 1 101 CYS n 1 102 ARG n 1 103 SER n 1 104 GLY n 1 105 ARG n 1 106 THR n 1 107 THR n 1 108 GLY n 1 109 TYR n 1 110 GLN n 1 111 CYS n 1 112 GLY n 1 113 THR n 1 114 ILE n 1 115 THR n 1 116 ALA n 1 117 LYS n 1 118 ASN n 1 119 VAL n 1 120 THR n 1 121 ALA n 1 122 ASN n 1 123 TYR n 1 124 ALA n 1 125 GLU n 1 126 GLY n 1 127 ALA n 1 128 VAL n 1 129 ARG n 1 130 GLY n 1 131 LEU n 1 132 THR n 1 133 GLN n 1 134 GLY n 1 135 ASN n 1 136 ALA n 1 137 CYS n 1 138 ALA n 1 139 GLY n 1 140 ARG n 1 141 GLY n 1 142 ASP n 1 143 SER n 1 144 GLY n 1 145 GLY n 1 146 SER n 1 147 TRP n 1 148 ILE n 1 149 THR n 1 150 SER n 1 151 ALA n 1 152 GLY n 1 153 GLN n 1 154 ALA n 1 155 GLN n 1 156 GLY n 1 157 VAL n 1 158 MET n 1 159 SER n 1 160 GLY n 1 161 ALA n 1 162 ASN n 1 163 VAL n 1 164 GLN n 1 165 SER n 1 166 ASN n 1 167 GLY n 1 168 ASN n 1 169 ASN n 1 170 CYS n 1 171 GLY n 1 172 ILE n 1 173 PRO n 1 174 ALA n 1 175 SER n 1 176 GLN n 1 177 ARG n 1 178 SER n 1 179 SER n 1 180 LEU n 1 181 PHE n 1 182 GLU n 1 183 ARG n 1 184 LEU n 1 185 GLN n 1 186 PRO n 1 187 ILE n 1 188 LEU n 1 189 SER n 1 190 GLN n 1 191 TYR n 1 192 GLY n 1 193 LEU n 1 194 SER n 1 195 LEU n 1 196 VAL n 1 197 THR n 1 198 GLY n 2 1 MSU n 2 2 ALA n 2 3 ALA n 2 4 PRO n 2 5 BLE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lysobacter _entity_src_gen.pdbx_gene_src_gene 'ALPHA-LYTIC PROTEASE PREPROENZ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 495 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lysobacter enzymogenes' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 69 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 29487 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene 'ALPHA-LYTIC PROTEASE PREPROENZYME' _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PALP12 (PBR322-DERIVATIVE)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PRLA_LYSEN 1 P00778 1 ;MYVSNHRSRRVARVSVSCLVAALAAMSCGAALAADQVDPQLKFAMQRDLGIFPTQLPQYLQTEKLARTQAAAIEREFGAQ FAGSWIERNEDGSFKLVAATSGARKSSTLGGVEVRNVRYSLKQLQSAMEQLDAGANARVKGVSKPLDGVQSWYVDPRSNA VVVKVDDGATEAGVDFVALSGADSAQVRIESSPGKLQTTANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVN ATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTA NYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; ? 2 PDB 1GBC 2 1GBC ? '(MSU)AAP(BLE)' ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1GBC A 1 A 198 ? P00778 200 ? 397 ? 15 245 2 2 1GBC P 5 ? 1 ? 1GBC 1 ? 5 ? 1 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1GBC ALA A 138 ? UNP P00778 MET 337 'engineered mutation' 190 1 1 1GBC ALA A 161 ? UNP P00778 GLY 360 'engineered mutation' 216 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BLE peptide-like n 'LEUCINE BORONIC ACID' ? 'C5 H14 B N O2' 130.981 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSU non-polymer . 'SUCCINIC ACID MONOMETHYL ESTER' ? 'C5 H8 O4' 132.115 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1GBC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1994-09-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1GBC _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 17.5 _reflns.d_resolution_high 2.20 _reflns.number_obs 10447 _reflns.number_all ? _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1GBC _refine.ls_number_reflns_obs 10255 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 17.5 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.141 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.141 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details 'THE METHOXYSUCCINYL PORTION OF THE INHIBITOR WAS DISORDERED AND NO COORDINATES ARE INCLUDED FOR IT IN THIS ENTRY' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1415 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 1584 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 17.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.0 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.18 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1GBC _struct.title ;ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY ALA COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GBC _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'ACTIVE-SITE MUTATION, SERINE PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 35 ? CYS A 37 ? GLY A 56 CYS A 58 5 ? 3 HELX_P HELX_P2 2 ALA A 174 B GLN A 176 ? ALA A 222 GLN A 223 5 ? 3 HELX_P HELX_P3 3 LEU A 184 ? TYR A 191 ? LEU A 231 TYR A 238 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 37 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf2 disulf ? ? A CYS 101 SG ? ? ? 1_555 A CYS 111 SG ? ? A CYS 137 A CYS 159 1_555 ? ? ? ? ? ? ? 2.000 ? ? disulf3 disulf ? ? A CYS 137 SG ? ? ? 1_555 A CYS 170 SG ? A A CYS 189 A CYS 220 1_555 ? ? ? ? ? ? ? 2.021 ? ? covale1 covale none ? A SER 143 OG ? ? ? 1_555 B BLE 5 B ? ? A SER 195 P BLE 1 1_555 ? ? ? ? ? ? ? 1.407 ? ? covale2 covale both ? B BLE 5 N ? ? ? 1_555 B PRO 4 C ? ? P BLE 1 P PRO 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 59 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 60 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? D ? 6 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 8 ? ILE A 11 ? GLU A 32 ILE A 35 A 2 SER A 15 ? SER A 18 ? SER A 40 SER A 43 B 1 PHE A 21 ? ARG A 25 A PHE A 45 ARG A 48 B 2 THR A 28 ? THR A 33 ? THR A 49 THR A 54 B 3 ARG A 64 ? LEU A 69 ? ARG A 103 LEU A 108 B 4 ALA A 49 ? VAL A 58 ? ALA A 82 VAL A 91 B 5 THR A 43 ? ILE A 46 ? THR A 62 ILE A 66 C 1 ARG A 78 A ASN A 81 D ARG A 120 ASN A 120 C 2 SER A 84 H THR A 87 K SER A 120 THR A 120 D 1 GLY A 108 ? THR A 113 ? GLY A 156 THR A 161 D 2 ALA A 99 ? GLY A 104 ? ALA A 135 GLY A 140 D 3 SER A 146 ? ILE A 148 ? SER A 198 ILE A 200 D 4 ALA A 154 ? ALA A 161 ? ALA A 209 ALA A 216 D 5 SER A 179 ? ARG A 183 ? SER A 226 ARG A 230 D 6 THR A 132 ? GLY A 134 ? THR A 181 GLY A 183 E 1 ALA A 121 ? TYR A 123 ? ALA A 169 TYR A 171 E 2 GLY A 126 ? VAL A 128 ? GLY A 175 VAL A 177 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 9 ? O TYR A 33 N CYS A 17 ? N CYS A 42 B 1 2 O PHE A 21 ? O PHE A 45 N VAL A 32 ? N VAL A 53 B 2 3 O PHE A 31 ? O PHE A 52 N VAL A 67 ? N VAL A 106 B 3 4 O ARG A 64 ? O ARG A 103 N VAL A 58 ? N VAL A 91 B 4 5 O ALA A 49 ? O ALA A 82 N ILE A 46 ? N ILE A 66 C 1 2 O VAL A 79 B O VAL A 120 N VAL A 86 J N VAL A 120 D 1 2 O GLY A 108 ? O GLY A 156 N GLY A 104 ? N GLY A 140 D 2 3 O CYS A 101 ? O CYS A 137 N ILE A 148 ? N ILE A 200 D 3 4 O TRP A 147 ? O TRP A 199 N GLY A 156 ? N GLY A 211 D 4 5 O VAL A 157 ? O VAL A 212 N GLU A 182 ? N GLU A 229 D 5 6 O SER A 179 ? O SER A 226 N GLY A 134 ? N GLY A 183 E 1 2 O ALA A 121 ? O ALA A 169 N VAL A 128 ? N VAL A 177 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 7 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A SO4 2 ? 8 'BINDING SITE FOR RESIDUE SO4 A 2' AC3 Software ? ? ? ? 18 'BINDING SITE FOR CHAIN P OF METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 SER A 83 G SER A 120 . ? 4_555 ? 2 AC1 7 GLY A 90 ? GLY A 123 . ? 5_565 ? 3 AC1 7 SER A 91 ? SER A 124 . ? 5_565 ? 4 AC1 7 THR A 92 ? THR A 125 . ? 5_565 ? 5 AC1 7 ARG A 140 ? ARG A 192 . ? 1_555 ? 6 AC1 7 HOH E . ? HOH A 253 . ? 5_565 ? 7 AC1 7 HOH E . ? HOH A 293 . ? 5_565 ? 8 AC2 8 ALA A 1 A ALA A 15 . ? 3_665 ? 9 AC2 8 ASN A 2 B ASN A 15 . ? 3_665 ? 10 AC2 8 ARG A 183 ? ARG A 230 . ? 1_555 ? 11 AC2 8 PRO A 186 ? PRO A 233 . ? 1_555 ? 12 AC2 8 HOH E . ? HOH A 269 . ? 3_665 ? 13 AC2 8 HOH E . ? HOH A 280 . ? 1_555 ? 14 AC2 8 HOH E . ? HOH A 350 . ? 1_555 ? 15 AC2 8 HOH E . ? HOH A 364 . ? 3_665 ? 16 AC3 18 HIS A 36 ? HIS A 57 . ? 1_555 ? 17 AC3 18 ARG A 89 ? ARG A 122 . ? 5_565 ? 18 AC3 18 TYR A 123 ? TYR A 171 . ? 1_555 ? 19 AC3 18 GLY A 139 ? GLY A 191 . ? 1_555 ? 20 AC3 18 GLY A 141 ? GLY A 193 . ? 1_555 ? 21 AC3 18 ASP A 142 ? ASP A 194 . ? 1_555 ? 22 AC3 18 SER A 143 ? SER A 195 . ? 1_555 ? 23 AC3 18 SER A 159 ? SER A 214 . ? 1_555 ? 24 AC3 18 GLY A 160 ? GLY A 215 . ? 1_555 ? 25 AC3 18 ALA A 161 ? ALA A 216 . ? 1_555 ? 26 AC3 18 VAL A 163 ? VAL A 218 . ? 1_555 ? 27 AC3 18 HOH E . ? HOH A 388 . ? 1_555 ? 28 AC3 18 HOH E . ? HOH A 392 . ? 1_555 ? 29 AC3 18 HOH F . ? HOH P 141 . ? 1_555 ? 30 AC3 18 HOH F . ? HOH P 145 . ? 1_555 ? 31 AC3 18 HOH F . ? HOH P 153 . ? 1_555 ? 32 AC3 18 HOH F . ? HOH P 160 . ? 1_555 ? 33 AC3 18 HOH F . ? HOH P 161 . ? 1_555 ? # _database_PDB_matrix.entry_id 1GBC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GBC _atom_sites.fract_transf_matrix[1][1] 0.015115 _atom_sites.fract_transf_matrix[1][2] 0.008727 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012463 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text ? # loop_ _atom_type.symbol B C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 15 15 ALA ALA A A n A 1 2 ASN 2 15 15 ASN ASN A B n A 1 3 ILE 3 16 16 ILE ILE A . n A 1 4 VAL 4 17 17 VAL VAL A . n A 1 5 GLY 5 18 18 GLY GLY A . n A 1 6 GLY 6 19 19 GLY GLY A . n A 1 7 ILE 7 31 31 ILE ILE A . n A 1 8 GLU 8 32 32 GLU GLU A . n A 1 9 TYR 9 33 33 TYR TYR A . n A 1 10 SER 10 34 34 SER SER A . n A 1 11 ILE 11 35 35 ILE ILE A . n A 1 12 ASN 12 36 36 ASN ASN A . n A 1 13 ASN 13 38 38 ASN ASN A . n A 1 14 ALA 14 39 39 ALA ALA A . n A 1 15 SER 15 40 40 SER SER A . n A 1 16 LEU 16 41 41 LEU LEU A . n A 1 17 CYS 17 42 42 CYS CYS A . n A 1 18 SER 18 43 43 SER SER A . n A 1 19 VAL 19 44 44 VAL VAL A . n A 1 20 GLY 20 44 44 GLY GLY A A n A 1 21 PHE 21 45 45 PHE PHE A . n A 1 22 SER 22 46 46 SER SER A . n A 1 23 VAL 23 47 47 VAL VAL A . n A 1 24 THR 24 48 48 THR THR A . n A 1 25 ARG 25 48 48 ARG ARG A A n A 1 26 GLY 26 48 48 GLY GLY A B n A 1 27 ALA 27 48 48 ALA ALA A C n A 1 28 THR 28 49 49 THR THR A . n A 1 29 LYS 29 50 50 LYS LYS A . n A 1 30 GLY 30 51 51 GLY GLY A . n A 1 31 PHE 31 52 52 PHE PHE A . n A 1 32 VAL 32 53 53 VAL VAL A . n A 1 33 THR 33 54 54 THR THR A . n A 1 34 ALA 34 55 55 ALA ALA A . n A 1 35 GLY 35 56 56 GLY GLY A . n A 1 36 HIS 36 57 57 HIS HIS A . n A 1 37 CYS 37 58 58 CYS CYS A . n A 1 38 GLY 38 59 59 GLY GLY A . n A 1 39 THR 39 59 59 THR THR A A n A 1 40 VAL 40 59 59 VAL VAL A B n A 1 41 ASN 41 60 60 ASN ASN A . n A 1 42 ALA 42 61 61 ALA ALA A . n A 1 43 THR 43 62 62 THR THR A . n A 1 44 ALA 44 64 64 ALA ALA A . n A 1 45 ARG 45 65 65 ARG ARG A . n A 1 46 ILE 46 66 66 ILE ILE A . n A 1 47 GLY 47 67 67 GLY GLY A . n A 1 48 GLY 48 81 81 GLY GLY A . n A 1 49 ALA 49 82 82 ALA ALA A . n A 1 50 VAL 50 83 83 VAL VAL A . n A 1 51 VAL 51 84 84 VAL VAL A . n A 1 52 GLY 52 85 85 GLY GLY A . n A 1 53 THR 53 87 87 THR THR A . n A 1 54 PHE 54 88 88 PHE PHE A . n A 1 55 ALA 55 88 88 ALA ALA A A n A 1 56 ALA 56 89 89 ALA ALA A . n A 1 57 ARG 57 90 90 ARG ARG A . n A 1 58 VAL 58 91 91 VAL VAL A . n A 1 59 PHE 59 94 94 PHE PHE A . n A 1 60 PRO 60 95 95 PRO PRO A . n A 1 61 GLY 61 100 100 GLY GLY A . n A 1 62 ASN 62 101 101 ASN ASN A . n A 1 63 ASP 63 102 102 ASP ASP A . n A 1 64 ARG 64 103 103 ARG ARG A . n A 1 65 ALA 65 104 104 ALA ALA A . n A 1 66 TRP 66 105 105 TRP TRP A . n A 1 67 VAL 67 106 106 VAL VAL A . n A 1 68 SER 68 107 107 SER SER A . n A 1 69 LEU 69 108 108 LEU LEU A . n A 1 70 THR 70 109 109 THR THR A . n A 1 71 SER 71 110 110 SER SER A . n A 1 72 ALA 72 111 111 ALA ALA A . n A 1 73 GLN 73 112 112 GLN GLN A . n A 1 74 THR 74 113 113 THR THR A . n A 1 75 LEU 75 114 114 LEU LEU A . n A 1 76 LEU 76 119 119 LEU LEU A . n A 1 77 PRO 77 120 120 PRO PRO A . n A 1 78 ARG 78 120 120 ARG ARG A A n A 1 79 VAL 79 120 120 VAL VAL A B n A 1 80 ALA 80 120 120 ALA ALA A C n A 1 81 ASN 81 120 120 ASN ASN A D n A 1 82 GLY 82 120 120 GLY GLY A E n A 1 83 SER 83 120 120 SER SER A G n A 1 84 SER 84 120 120 SER SER A H n A 1 85 PHE 85 120 120 PHE PHE A I n A 1 86 VAL 86 120 120 VAL VAL A J n A 1 87 THR 87 120 120 THR THR A K n A 1 88 VAL 88 121 121 VAL VAL A . n A 1 89 ARG 89 122 122 ARG ARG A . n A 1 90 GLY 90 123 123 GLY GLY A . n A 1 91 SER 91 124 124 SER SER A . n A 1 92 THR 92 125 125 THR THR A . n A 1 93 GLU 93 129 129 GLU GLU A . n A 1 94 ALA 94 130 130 ALA ALA A . n A 1 95 ALA 95 131 131 ALA ALA A . n A 1 96 VAL 96 132 132 VAL VAL A . n A 1 97 GLY 97 133 133 GLY GLY A . n A 1 98 ALA 98 134 134 ALA ALA A . n A 1 99 ALA 99 135 135 ALA ALA A . n A 1 100 VAL 100 136 136 VAL VAL A . n A 1 101 CYS 101 137 137 CYS CYS A . n A 1 102 ARG 102 138 138 ARG ARG A . n A 1 103 SER 103 139 139 SER SER A . n A 1 104 GLY 104 140 140 GLY GLY A . n A 1 105 ARG 105 141 141 ARG ARG A . n A 1 106 THR 106 142 142 THR THR A . n A 1 107 THR 107 143 143 THR THR A . n A 1 108 GLY 108 156 156 GLY GLY A . n A 1 109 TYR 109 157 157 TYR TYR A . n A 1 110 GLN 110 158 158 GLN GLN A . n A 1 111 CYS 111 159 159 CYS CYS A . n A 1 112 GLY 112 160 160 GLY GLY A . n A 1 113 THR 113 161 161 THR THR A . n A 1 114 ILE 114 162 162 ILE ILE A . n A 1 115 THR 115 163 163 THR THR A . n A 1 116 ALA 116 164 164 ALA ALA A . n A 1 117 LYS 117 165 165 LYS LYS A . n A 1 118 ASN 118 166 166 ASN ASN A . n A 1 119 VAL 119 167 167 VAL VAL A . n A 1 120 THR 120 168 168 THR THR A . n A 1 121 ALA 121 169 169 ALA ALA A . n A 1 122 ASN 122 170 170 ASN ASN A . n A 1 123 TYR 123 171 171 TYR TYR A . n A 1 124 ALA 124 173 173 ALA ALA A . n A 1 125 GLU 125 174 174 GLU GLU A . n A 1 126 GLY 126 175 175 GLY GLY A . n A 1 127 ALA 127 176 176 ALA ALA A . n A 1 128 VAL 128 177 177 VAL VAL A . n A 1 129 ARG 129 178 178 ARG ARG A . n A 1 130 GLY 130 179 179 GLY GLY A . n A 1 131 LEU 131 180 180 LEU LEU A . n A 1 132 THR 132 181 181 THR THR A . n A 1 133 GLN 133 182 182 GLN GLN A . n A 1 134 GLY 134 183 183 GLY GLY A . n A 1 135 ASN 135 184 184 ASN ASN A . n A 1 136 ALA 136 185 185 ALA ALA A . n A 1 137 CYS 137 189 189 CYS CYS A . n A 1 138 ALA 138 190 190 ALA ALA A . n A 1 139 GLY 139 191 191 GLY GLY A . n A 1 140 ARG 140 192 192 ARG ARG A . n A 1 141 GLY 141 193 193 GLY GLY A . n A 1 142 ASP 142 194 194 ASP ASP A . n A 1 143 SER 143 195 195 SER SER A . n A 1 144 GLY 144 196 196 GLY GLY A . n A 1 145 GLY 145 197 197 GLY GLY A . n A 1 146 SER 146 198 198 SER SER A . n A 1 147 TRP 147 199 199 TRP TRP A . n A 1 148 ILE 148 200 200 ILE ILE A . n A 1 149 THR 149 201 201 THR THR A . n A 1 150 SER 150 201 201 SER SER A A n A 1 151 ALA 151 202 202 ALA ALA A . n A 1 152 GLY 152 207 207 GLY GLY A . n A 1 153 GLN 153 208 208 GLN GLN A . n A 1 154 ALA 154 209 209 ALA ALA A . n A 1 155 GLN 155 210 210 GLN GLN A . n A 1 156 GLY 156 211 211 GLY GLY A . n A 1 157 VAL 157 212 212 VAL VAL A . n A 1 158 MET 158 213 213 MET MET A . n A 1 159 SER 159 214 214 SER SER A . n A 1 160 GLY 160 215 215 GLY GLY A . n A 1 161 ALA 161 216 216 ALA ALA A . n A 1 162 ASN 162 217 217 ASN ASN A . n A 1 163 VAL 163 218 218 VAL VAL A . n A 1 164 GLN 164 219 219 GLN GLN A . n A 1 165 SER 165 219 219 SER SER A A n A 1 166 ASN 166 219 219 ASN ASN A B n A 1 167 GLY 167 219 219 GLY GLY A C n A 1 168 ASN 168 219 219 ASN ASN A D n A 1 169 ASN 169 220 220 ASN ASN A . n A 1 170 CYS 170 220 220 CYS CYS A A n A 1 171 GLY 171 221 221 GLY GLY A . n A 1 172 ILE 172 222 222 ILE ILE A . n A 1 173 PRO 173 222 222 PRO PRO A A n A 1 174 ALA 174 222 222 ALA ALA A B n A 1 175 SER 175 222 222 SER SER A C n A 1 176 GLN 176 223 223 GLN GLN A . n A 1 177 ARG 177 224 224 ARG ARG A . n A 1 178 SER 178 225 225 SER SER A . n A 1 179 SER 179 226 226 SER SER A . n A 1 180 LEU 180 227 227 LEU LEU A . n A 1 181 PHE 181 228 228 PHE PHE A . n A 1 182 GLU 182 229 229 GLU GLU A . n A 1 183 ARG 183 230 230 ARG ARG A . n A 1 184 LEU 184 231 231 LEU LEU A . n A 1 185 GLN 185 232 232 GLN GLN A . n A 1 186 PRO 186 233 233 PRO PRO A . n A 1 187 ILE 187 234 234 ILE ILE A . n A 1 188 LEU 188 235 235 LEU LEU A . n A 1 189 SER 189 236 236 SER SER A . n A 1 190 GLN 190 237 237 GLN GLN A . n A 1 191 TYR 191 238 238 TYR TYR A . n A 1 192 GLY 192 239 239 GLY GLY A . n A 1 193 LEU 193 240 240 LEU LEU A . n A 1 194 SER 194 241 241 SER SER A . n A 1 195 LEU 195 242 242 LEU LEU A . n A 1 196 VAL 196 243 243 VAL VAL A . n A 1 197 THR 197 244 244 THR THR A . n A 1 198 GLY 198 245 245 GLY GLY A . n B 2 1 MSU 1 5 ? ? ? P . n B 2 2 ALA 2 4 4 ALA ALA P . n B 2 3 ALA 3 3 3 ALA ALA P . n B 2 4 PRO 4 2 2 PRO PRO P . n B 2 5 BLE 5 1 1 BLE BLE P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 1 1 SO4 SO4 A . D 3 SO4 1 2 2 SO4 SO4 A . E 4 HOH 1 246 3 HOH HOH A . E 4 HOH 2 247 4 HOH HOH A . E 4 HOH 3 248 5 HOH HOH A . E 4 HOH 4 249 6 HOH HOH A . E 4 HOH 5 250 7 HOH HOH A . E 4 HOH 6 251 8 HOH HOH A . E 4 HOH 7 252 9 HOH HOH A . E 4 HOH 8 253 10 HOH HOH A . E 4 HOH 9 254 11 HOH HOH A . E 4 HOH 10 255 12 HOH HOH A . E 4 HOH 11 256 13 HOH HOH A . E 4 HOH 12 257 14 HOH HOH A . E 4 HOH 13 258 15 HOH HOH A . E 4 HOH 14 259 16 HOH HOH A . E 4 HOH 15 260 17 HOH HOH A . E 4 HOH 16 261 18 HOH HOH A . E 4 HOH 17 262 19 HOH HOH A . E 4 HOH 18 263 20 HOH HOH A . E 4 HOH 19 264 21 HOH HOH A . E 4 HOH 20 265 22 HOH HOH A . E 4 HOH 21 266 23 HOH HOH A . E 4 HOH 22 267 24 HOH HOH A . E 4 HOH 23 268 25 HOH HOH A . E 4 HOH 24 269 26 HOH HOH A . E 4 HOH 25 270 27 HOH HOH A . E 4 HOH 26 271 28 HOH HOH A . E 4 HOH 27 272 29 HOH HOH A . E 4 HOH 28 273 30 HOH HOH A . E 4 HOH 29 274 31 HOH HOH A . E 4 HOH 30 275 32 HOH HOH A . E 4 HOH 31 276 33 HOH HOH A . E 4 HOH 32 277 34 HOH HOH A . E 4 HOH 33 278 35 HOH HOH A . E 4 HOH 34 279 36 HOH HOH A . E 4 HOH 35 280 37 HOH HOH A . E 4 HOH 36 281 38 HOH HOH A . E 4 HOH 37 282 39 HOH HOH A . E 4 HOH 38 283 40 HOH HOH A . E 4 HOH 39 284 41 HOH HOH A . E 4 HOH 40 285 42 HOH HOH A . E 4 HOH 41 286 43 HOH HOH A . E 4 HOH 42 287 44 HOH HOH A . E 4 HOH 43 288 45 HOH HOH A . E 4 HOH 44 289 46 HOH HOH A . E 4 HOH 45 290 47 HOH HOH A . E 4 HOH 46 291 48 HOH HOH A . E 4 HOH 47 292 49 HOH HOH A . E 4 HOH 48 293 50 HOH HOH A . E 4 HOH 49 294 51 HOH HOH A . E 4 HOH 50 295 52 HOH HOH A . E 4 HOH 51 296 53 HOH HOH A . E 4 HOH 52 297 54 HOH HOH A . E 4 HOH 53 298 55 HOH HOH A . E 4 HOH 54 299 56 HOH HOH A . E 4 HOH 55 300 57 HOH HOH A . E 4 HOH 56 301 58 HOH HOH A . E 4 HOH 57 302 59 HOH HOH A . E 4 HOH 58 303 60 HOH HOH A . E 4 HOH 59 304 61 HOH HOH A . E 4 HOH 60 305 62 HOH HOH A . E 4 HOH 61 306 63 HOH HOH A . E 4 HOH 62 307 64 HOH HOH A . E 4 HOH 63 308 65 HOH HOH A . E 4 HOH 64 309 66 HOH HOH A . E 4 HOH 65 310 67 HOH HOH A . E 4 HOH 66 311 68 HOH HOH A . E 4 HOH 67 312 69 HOH HOH A . E 4 HOH 68 313 70 HOH HOH A . E 4 HOH 69 314 71 HOH HOH A . E 4 HOH 70 315 72 HOH HOH A . E 4 HOH 71 316 73 HOH HOH A . E 4 HOH 72 317 74 HOH HOH A . E 4 HOH 73 318 75 HOH HOH A . E 4 HOH 74 319 76 HOH HOH A . E 4 HOH 75 320 77 HOH HOH A . E 4 HOH 76 321 78 HOH HOH A . E 4 HOH 77 322 79 HOH HOH A . E 4 HOH 78 323 80 HOH HOH A . E 4 HOH 79 324 81 HOH HOH A . E 4 HOH 80 325 82 HOH HOH A . E 4 HOH 81 326 83 HOH HOH A . E 4 HOH 82 327 84 HOH HOH A . E 4 HOH 83 328 85 HOH HOH A . E 4 HOH 84 329 86 HOH HOH A . E 4 HOH 85 330 87 HOH HOH A . E 4 HOH 86 331 88 HOH HOH A . E 4 HOH 87 332 89 HOH HOH A . E 4 HOH 88 333 90 HOH HOH A . E 4 HOH 89 334 91 HOH HOH A . E 4 HOH 90 335 92 HOH HOH A . E 4 HOH 91 336 93 HOH HOH A . E 4 HOH 92 337 94 HOH HOH A . E 4 HOH 93 338 95 HOH HOH A . E 4 HOH 94 339 96 HOH HOH A . E 4 HOH 95 340 97 HOH HOH A . E 4 HOH 96 341 98 HOH HOH A . E 4 HOH 97 342 99 HOH HOH A . E 4 HOH 98 343 100 HOH HOH A . E 4 HOH 99 344 101 HOH HOH A . E 4 HOH 100 345 102 HOH HOH A . E 4 HOH 101 346 103 HOH HOH A . E 4 HOH 102 347 104 HOH HOH A . E 4 HOH 103 348 105 HOH HOH A . E 4 HOH 104 349 106 HOH HOH A . E 4 HOH 105 350 107 HOH HOH A . E 4 HOH 106 351 108 HOH HOH A . E 4 HOH 107 352 109 HOH HOH A . E 4 HOH 108 353 110 HOH HOH A . E 4 HOH 109 354 111 HOH HOH A . E 4 HOH 110 355 112 HOH HOH A . E 4 HOH 111 356 113 HOH HOH A . E 4 HOH 112 357 114 HOH HOH A . E 4 HOH 113 358 115 HOH HOH A . E 4 HOH 114 359 116 HOH HOH A . E 4 HOH 115 360 117 HOH HOH A . E 4 HOH 116 361 118 HOH HOH A . E 4 HOH 117 362 119 HOH HOH A . E 4 HOH 118 363 120 HOH HOH A . E 4 HOH 119 364 121 HOH HOH A . E 4 HOH 120 365 122 HOH HOH A . E 4 HOH 121 366 123 HOH HOH A . E 4 HOH 122 367 124 HOH HOH A . E 4 HOH 123 368 125 HOH HOH A . E 4 HOH 124 369 126 HOH HOH A . E 4 HOH 125 370 127 HOH HOH A . E 4 HOH 126 371 128 HOH HOH A . E 4 HOH 127 372 129 HOH HOH A . E 4 HOH 128 373 130 HOH HOH A . E 4 HOH 129 374 131 HOH HOH A . E 4 HOH 130 375 132 HOH HOH A . E 4 HOH 131 376 133 HOH HOH A . E 4 HOH 132 377 134 HOH HOH A . E 4 HOH 133 378 135 HOH HOH A . E 4 HOH 134 379 136 HOH HOH A . E 4 HOH 135 380 137 HOH HOH A . E 4 HOH 136 381 138 HOH HOH A . E 4 HOH 137 382 139 HOH HOH A . E 4 HOH 138 383 140 HOH HOH A . E 4 HOH 139 384 143 HOH HOH A . E 4 HOH 140 385 144 HOH HOH A . E 4 HOH 141 386 147 HOH HOH A . E 4 HOH 142 387 148 HOH HOH A . E 4 HOH 143 388 149 HOH HOH A . E 4 HOH 144 389 150 HOH HOH A . E 4 HOH 145 390 151 HOH HOH A . E 4 HOH 146 391 152 HOH HOH A . E 4 HOH 147 392 154 HOH HOH A . E 4 HOH 148 393 155 HOH HOH A . E 4 HOH 149 394 156 HOH HOH A . E 4 HOH 150 395 157 HOH HOH A . F 4 HOH 1 141 141 HOH HOH P . F 4 HOH 2 142 142 HOH HOH P . F 4 HOH 3 145 145 HOH HOH P . F 4 HOH 4 146 146 HOH HOH P . F 4 HOH 5 153 153 HOH HOH P . F 4 HOH 6 158 158 HOH HOH P . F 4 HOH 7 159 159 HOH HOH P . F 4 HOH 8 160 160 HOH HOH P . F 4 HOH 9 161 161 HOH HOH P . # _pdbx_molecule_features.prd_id PRD_000317 _pdbx_molecule_features.name 'N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-prolinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000317 _pdbx_molecule.asym_id B # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id BLE _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id BLE _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LEU _pdbx_struct_mod_residue.details 'LEUCINE BORONIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1150 ? 1 MORE -24 ? 1 'SSA (A^2)' 7810 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-01-29 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2021-11-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_database_status 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.process_site' 4 5 'Structure model' '_struct_conn.pdbx_dist_value' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 20 5 'Structure model' '_struct_ref_seq.db_align_beg' 21 5 'Structure model' '_struct_ref_seq.db_align_end' 22 5 'Structure model' '_struct_ref_seq_dif.details' 23 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RIGAKU 'data collection' 'AFC5 CONTROL SOFTWARE' ? 1 X-PLOR 'model building' 3.1 ? 2 X-PLOR refinement 3.1 ? 3 RIGAKU 'data reduction' 'AFC5 CONTROL SOFTWARE' ? 4 X-PLOR phasing 3.1 ? 5 # _pdbx_entry_details.entry_id 1GBC _pdbx_entry_details.compound_details ;INHIBITORY PEPTIDE BORONIC ACIDS ARE PEPTIDE ANALOGS IN WHICH THE C-TERMINAL CARBOXYL GROUP HAS BEEN REPLACED WITH THE BORONIC ACID GROUP (B(OH)2). ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;INHIBITORY PEPTIDE BORONIC ACIDS ARE PEPTIDE ANALOGS IN WHICH THE C-TERMINAL CARBOXYL GROUP HAS BEEN REPLACED WITH THE BORONIC ACID GROUP (B(OH)2). INHIBITOR NUMBERING IS BY ANALOGY TO PROTEASE SUBSTRATE NOMENCLATURE IN WHICH THE RESIDUE PRIOR TO THE SCISSILE BOND IS THE P1 RESIDUE, THE NEXT TOWARD THE N-TERMINUS IS THE P2 RESIDUE, ETC. ; _pdbx_entry_details.sequence_details ;CHAIN A RESIDUE NUMBERING IS DONE BY HOMOLOGY WITH CHYMOTRYPSIN FOR RESIDUES 15A - 245. CHAIN P INHIBITOR NUMBERING IS DONE BY ANALOGY TO PROTEASE SUBSTRATE NOMENCLATURE IN WHICH THE RESIDUE PRIOR TO THE SCISSILE BOND IS THE P1 RESIDUE, THE NEXT TOWARD THE N-TERMINUS IS THE P2 RESIDUE, ETC. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 48 A ? CZ A ARG 48 A ? NH1 A ARG 48 A ? 124.05 120.30 3.75 0.50 N 2 1 NE A ARG 48 A ? CZ A ARG 48 A ? NH2 A ARG 48 A ? 113.95 120.30 -6.35 0.50 N 3 1 NE A ARG 65 ? ? CZ A ARG 65 ? ? NH1 A ARG 65 ? ? 125.44 120.30 5.14 0.50 N 4 1 NE A ARG 90 ? ? CZ A ARG 90 ? ? NH1 A ARG 90 ? ? 125.63 120.30 5.33 0.50 N 5 1 CD1 A TRP 105 ? ? CG A TRP 105 ? ? CD2 A TRP 105 ? ? 112.00 106.30 5.70 0.80 N 6 1 CE2 A TRP 105 ? ? CD2 A TRP 105 ? ? CG A TRP 105 ? ? 101.88 107.30 -5.42 0.80 N 7 1 NE A ARG 120 A ? CZ A ARG 120 A ? NH1 A ARG 120 A ? 123.98 120.30 3.68 0.50 N 8 1 CD1 A TRP 199 ? ? CG A TRP 199 ? ? CD2 A TRP 199 ? ? 111.95 106.30 5.65 0.80 N 9 1 CE2 A TRP 199 ? ? CD2 A TRP 199 ? ? CG A TRP 199 ? ? 102.24 107.30 -5.06 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 39 ? ? -136.83 -81.88 2 1 PRO A 95 ? ? -79.78 -157.25 3 1 PRO A 120 ? ? -78.29 49.35 4 1 ALA A 164 ? ? -171.65 149.50 5 1 SER A 214 ? ? -106.60 -61.75 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id P _pdbx_unobs_or_zero_occ_residues.auth_comp_id MSU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 5 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id MSU _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH #