data_1GDM # _entry.id 1GDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GDM WWPDB D_1000173535 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 1995-10-15 _pdbx_database_PDB_obs_spr.pdb_id 2GDM _pdbx_database_PDB_obs_spr.replace_pdb_id 1GDM _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 1GDM _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 1994-09-14 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harutyunyan, E.' 1 'Safonova, T.' 2 'Kuranova, I.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian)' Bioorg.Khim. 17 1605 ? 1991 BIKHD7 UR 0132-3423 0364 ? ? ? 1 'X-Ray Structure of Ferrous Complexes of the Yellow Lupin Leghemoglobin with Co and No at 1.8 Angstroms Resolution (Russian)' Bioorg.Khim. 14 1509 ? 1988 BIKHD7 UR 0132-3423 0364 ? ? ? 2 ;X-Ray Structural Investigation of Leghemoglobin. Vi. Structure of Acetate-Ferrileghemoglobin at a Resolution of 2.0 Angstroms (Russian) ; Kristallografiya 25 80 ? 1980 KRISAJ UR 0023-4761 0041 ? ? ? 3 'X-Ray Structural Investigation of Leghemoglobin. Vi. Structure of Acetate-Ferrileghemoglobin at a Resolution of 2.0 Angstroms' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 25 43 ? 1980 SPHCA6 US 0038-5638 0902 ? ? ? 4 'X-Ray Diffraction Study of Leghemoglobin. Iv. Determination of the Structure with 2.8 Angstroms Resolution (Russian)' Kristallografiya 23 517 ? 1978 KRISAJ UR 0023-4761 0041 ? ? ? 5 'X-Ray Structural Investigation of Leghemoglobin. Iv. Structure Determination at a Resolution of 2.8 Angstroms' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 23 287 ? 1978 SPHCA6 US 0038-5638 0902 ? ? ? 6 'Spatial Structure of Lupine Leghemoglobin with the 2.8 Angstroms Resolution (Russian)' 'Dokl.Akad.Nauk Sssr' 233 238 ? 1977 DANKAS UR 0002-3264 0093 ? ? ? 7 'Three-Dimensional Structure of Lupine Leghemoglobin with a Resolution of 2.8 Angstroms' 'Dokl.Biochem.(Engl.Transl.)' 233 67 ? 1977 DBIOAM US 0012-4958 0903 ? ? ? 8 'X-Ray Structural Study of Leghemoglobin. III. Crystallographic Data on the Structure of the First Component (Russian)' Kristallografiya 22 634 ? 1977 KRISAJ UR 0023-4761 0041 ? ? ? 9 'X-Ray Structural Study of Leghemoglobin. III. Crystallographic Data Regarding the Structure of the First Component' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 22 362 ? 1977 SPHCA6 US 0038-5638 0902 ? ? ? 10 'The Haem-Accessibility in Leghaemoglobin of Lupinus Luteus as Observed by Proton Magnetic Relaxation' 'Int.J.Pept.Protein Res.' 8 427 ? 1976 IJPPC3 DK 0367-8377 0215 ? ? ? 11 'X-Ray Study of Leghemoglobin. II. Determination of the Structure with Resolution of 5 Angstroms' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 19 602 ? 1975 SPHCA6 US 0038-5638 0902 ? ? ? 12 'X-Ray Study of Leghemoglobin. I.Purification, Crystallization, and Preparation of Derivatives Containing Heavy Atoms' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 19 598 ? 1975 SPHCA6 US 0038-5638 0902 ? ? ? 13 'Structure of Leghaemoglobin from Lupin Root Nodules at 5 Angstroms Resolution' Nature 254 163 ? 1975 NATUAS UK 0028-0836 0006 ? ? ? 14 'The X-Ray Structural Study of Leghemoglobin. II. Determination of the Structure at 5 Angstroms Resolution (Russian)' Kristallografiya 19 971 ? 1974 KRISAJ UR 0023-4761 0041 ? ? ? 15 ;The X-Ray Structural Study of Leghemoglobin. I. Purification, Crystallization, and Production of Derivatives Containing Heavy Atoms (Russian) ; Kristallografiya 19 964 ? 1974 KRISAJ UR 0023-4761 0041 ? ? ? 16 'X-Ray Determination of Three-Dimensional Structure of Leghemoglobin from Lupinus Luteus L. At 5 Angstroms Resolution (Russian)' 'Dokl.Akad.Nauk Sssr' 216 690 ? 1974 DANKAS UR 0002-3264 0093 ? ? ? 17 ;X-Ray Diffraction Determination of the Three-Dimensional Structure of Leghemoglobin of Lupinus Luteus L. With 5 Angstroms Resolution ; 'Dokl.Biochem.(Engl.Transl.)' 216 226 ? 1974 DBIOAM US 0012-4958 0903 ? ? ? 18 'Cell Parameters of Crystalline Plant (Lupinus Luteus (Lupine)) Hemoglobin (Russian)' Kristallografiya 16 237 ? 1971 KRISAJ UR 0023-4761 0041 ? ? ? 19 'Unit-Cell Parameters of Crystalline Plant Hemoglobin' 'Sov.Phys.Crystallogr.(Engl. Transl.)' 16 193 ? 1971 SPHCA6 US 0038-5638 0902 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Safonova, T.N.' 1 primary 'Teplyakov, A.V.' 2 primary 'Obmolova, G.V.' 3 primary 'Popov, A.N.' 4 primary 'Kuranova, I.P.' 5 primary 'Harutyunyan, E.G.' 6 1 'Obmolova, G.V.' 7 1 'Safonova, T.N.' 8 1 'Teplyakov, A.V.' 9 1 'Popov, A.N.' 10 1 'Kuranova, I.P.' 11 1 'Harutyunyan, E.G.' 12 1 'Vainshtein, B.K.' 13 2 'Arutyunyan, E.G.' 14 2 'Kuranova, I.P.' 15 2 'Vainshtein, B.K.' 16 2 'Steigemann, W.' 17 3 'Arutyunyan, E.G.' 18 3 'Kuranova, I.P.' 19 3 'Vainshtein, B.K.' 20 3 'Steigemann, W.' 21 4 'Vainshtein, B.K.' 22 4 'Arutyunyan, E.G.' 23 4 'Kuranova, I.P.' 24 4 'Borisov, V.V.' 25 4 'Sosfenov, N.I.' 26 4 'Pavlovskii, A.G.' 27 4 'Grebenko, A.I.' 28 4 'Nekrasov, Yu.V.' 29 5 'Vainshtein, B.K.' 30 5 'Arutyunyan, E.G.' 31 5 'Kuranova, I.P.' 32 5 'Borisov, V.V.' 33 5 'Sosfenov, N.I.' 34 5 'Pavlovskii, A.G.' 35 5 'Grebenko, A.I.' 36 5 'Nekrasov, Yu.V.' 37 6 'Vainshtein, B.K.' 38 6 'Arutiunian, E.G.' 39 6 'Kuranova, I.P.' 40 6 'Borisov, V.V.' 41 6 'Sosfenov, N.I.' 42 6 'Pavlovskii, A.G.' 43 6 'Grebenko, A.I.' 44 6 'Konareva, N.V.' 45 6 'Nekrasov, Iu.V.' 46 7 'Vainshtein, B.K.' 47 7 'Arutyunyan, E.G.' 48 7 'Kuranova, I.P.' 49 7 'Borisov, V.V.' 50 7 'Sosfenov, N.I.' 51 7 'Pavlovskii, A.G.' 52 7 'Grebenko, A.I.' 53 7 'Konareva, N.V.' 54 7 'Nekrasov, Yu.V.' 55 8 'Arutyunyan, E.G.' 56 8 'Kuranova, I.P.' 57 8 'Grebenko, A.I.' 58 8 'Voronova, A.A.' 59 9 'Arutyunyan, E.G.' 60 9 'Kuranova, I.P.' 61 9 'Grebenko, A.I.' 62 9 'Voronova, A.A.' 63 10 'Vuk-Pavlovic, S.' 64 10 'Benko, B.' 65 10 'Maricic, S.' 66 10 'Lahajnar, G.' 67 10 'Kuranova, I.P.' 68 10 'Vainshtein, B.K.' 69 11 'Vainshtein, B.K.' 70 11 'Arutyunyan, E.G.' 71 11 'Kuranova, I.P.' 72 11 'Borisov, V.V.' 73 11 'Sosfenov, N.I.' 74 11 'Pavlovskii, A.G.' 75 11 'Grebenko, A.I.' 76 11 'Konareva, N.V.' 77 12 'Vainshtein, B.K.' 78 12 'Arutyunyan, E.G.' 79 12 'Kuranova, I.P.' 80 12 'Borisov, V.V.' 81 12 'Sosfenov, N.I.' 82 12 'Pavlovskii, A.G.' 83 12 'Grebenko, A.I.' 84 12 'Konareva, N.V.' 85 13 'Vainshtein, B.K.' 86 13 'Harutyunyan, E.H.' 87 13 'Kuranova, I.P.' 88 13 'Borisov, V.V.' 89 13 'Sosfenov, N.I.' 90 13 'Pavlovsky, A.G.' 91 13 'Grebenko, A.I.' 92 13 'Konareva, N.V.' 93 14 'Vainshtein, B.K.' 94 14 'Arutyunyan, E.G.' 95 14 'Kuranova, I.P.' 96 14 'Borisov, V.V.' 97 14 'Sosfenov, N.I.' 98 14 'Pavlovskii, A.G.' 99 14 'Grebenko, A.I.' 100 14 'Konareva, N.V.' 101 15 'Vainshtein, B.K.' 102 15 'Arutyunyan, E.G.' 103 15 'Kuranova, I.P.' 104 15 'Borisov, V.V.' 105 15 'Sosfenov, N.I.' 106 15 'Pavlovskii, A.G.' 107 15 'Grebenko, A.I.' 108 15 'Konareva, N.V.' 109 16 'Vainshtein, B.K.' 110 16 'Arutiunian, E.G.' 111 16 'Kuranova, I.P.' 112 16 'Borisov, V.V.' 113 16 'Sosfenov, N.I.' 114 16 'Pavlovskii, A.G.' 115 16 'Grebenko, A.I.' 116 16 'Konareva, N.V.' 117 17 'Vainshtein, B.K.' 118 17 'Arutyunyan, E.G.' 119 17 'Kuranova, I.P.' 120 17 'Borisov, V.V.' 121 17 'Sosfenov, N.I.' 122 17 'Pavlovskii, A.G.' 123 17 'Grebenko, A.I.' 124 17 'Konareva, N.V.' 125 18 'Arutyunyan, E.G.' 126 18 'Zaitsev, V.N.' 127 18 'Zhiznevskaya, G.Ya.' 128 18 'Borodenko, L.I.' 129 19 'Arutyunyan, E.G.' 130 19 'Zaitsev, V.N.' 131 19 'Zhiznevskaya, G.Ya.' 132 19 'Borodenko, L.I.' 133 # _cell.entry_id 1GDM _cell.length_a 93.190 _cell.length_b 51.950 _cell.length_c 38.300 _cell.angle_alpha 90.00 _cell.angle_beta 98.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GDM _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 non-polymer man GLYCINE 16674.070 1 ? ? ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'OXYGEN MOLECULE' 31.999 1 ? ? ? ? 4 water nat water 18.015 155 ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OXY non-polymer . 'OXYGEN MOLECULE' ? O2 31.999 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1GDM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.23 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1GDM _refine.ls_number_reflns_obs 13723 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 7.7 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.155 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1187 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 155 _refine_hist.number_atoms_total 1387 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 7.7 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1GDM _struct.title 'CRYSTAL STRUCTURE OF FERRIC COMPLEXES OF THE YELLOW LUPIN LEGHEMOGLOBIN WITH ISOQUINOLINE AT 1.8 ANGSTROMS RESOLUTION (RUSSIAN)' _struct.pdbx_descriptor 'PROTEIN, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GDM _struct_keywords.pdbx_keywords 'OXYGEN TRANSPORT' _struct_keywords.text 'OXYGEN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A THR A . ? ALA A . ? THR ? 4 ALA ? 20 1 ? 17 HELX_P HELX_P2 B ASN A . ? ILE A . ? ASN ? 21 ILE ? 36 1 ? 16 HELX_P HELX_P3 C ALA A . ? LEU A . ? ALA ? 37 LEU ? 43 1 ? 7 HELX_P HELX_P4 D PHE A . ? LYS A . ? PHE ? 44 LYS ? 48 1 ? 5 HELX_P HELX_P5 E ASN A . ? GLY A . ? ASN ? 57 GLY ? 82 1 ? 26 HELX_P HELX_P6 F ALA A . ? GLY A . ? ALA ? 88 GLY ? 101 1 ? 14 HELX_P HELX_P7 G ASP A . ? GLY A . ? ASP ? 104 GLY ? 123 1 ? 20 HELX_P HELX_P8 H SER A . ? ALA A . ? SER ? 127 ALA ? 152 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1GDM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GDM _atom_sites.fract_transf_matrix[1][1] 0.010731 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001661 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019249 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026421 _atom_sites.fract_transf_vector[1] -0.25000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code A 1 GLY 1 1 1 GLY GLY ? . A 1 ALA 2 2 2 ALA ALA ? . A 1 LEU 3 3 3 LEU LEU ? . A 1 THR 4 4 4 THR THR ? . A 1 GLU 5 5 5 GLU GLU ? . A 1 SER 6 6 6 SER SER ? . A 1 GLN 7 7 7 GLN GLN ? . A 1 ALA 8 8 8 ALA ALA ? . A 1 ALA 9 9 9 ALA ALA ? . A 1 LEU 10 10 10 LEU LEU ? . A 1 VAL 11 11 11 VAL VAL ? . A 1 LYS 12 12 12 LYS LYS ? . A 1 SER 13 13 13 SER SER ? . A 1 SER 14 14 14 SER SER ? . A 1 TRP 15 15 15 TRP TRP ? . A 1 GLU 16 16 16 GLU GLU ? . A 1 GLU 17 17 17 GLU GLU ? . A 1 PHE 18 18 18 PHE PHE ? . A 1 ASN 19 19 19 ASN ASN ? . A 1 ALA 20 20 20 ALA ALA ? . A 1 ASN 21 21 21 ASN ASN ? . A 1 ILE 22 22 22 ILE ILE ? . A 1 PRO 23 23 23 PRO PRO ? . A 1 LYS 24 24 24 LYS LYS ? . A 1 HIS 25 25 25 HIS HIS ? . A 1 THR 26 26 26 THR THR ? . A 1 HIS 27 27 27 HIS HIS ? . A 1 ARG 28 28 28 ARG ARG ? . A 1 PHE 29 29 29 PHE PHE ? . A 1 PHE 30 30 30 PHE PHE ? . A 1 ILE 31 31 31 ILE ILE ? . A 1 LEU 32 32 32 LEU LEU ? . A 1 VAL 33 33 33 VAL VAL ? . A 1 LEU 34 34 34 LEU LEU ? . A 1 GLU 35 35 35 GLU GLU ? . A 1 ILE 36 36 36 ILE ILE ? . A 1 ALA 37 37 37 ALA ALA ? . A 1 PRO 38 38 38 PRO PRO ? . A 1 ALA 39 39 39 ALA ALA ? . A 1 ALA 40 40 40 ALA ALA ? . A 1 LYS 41 41 41 LYS LYS ? . A 1 ASP 42 42 42 ASP ASP ? . A 1 LEU 43 43 43 LEU LEU ? . A 1 PHE 44 44 44 PHE PHE ? . A 1 SER 45 45 45 SER SER ? . A 1 PHE 46 46 46 PHE PHE ? . A 1 LEU 47 47 47 LEU LEU ? . A 1 LYS 48 48 48 LYS LYS ? . A 1 GLY 49 49 49 GLY GLY ? . A 1 THR 50 50 50 THR THR ? . A 1 SER 51 51 51 SER SER ? . A 1 GLU 52 52 52 GLU GLU ? . A 1 VAL 53 53 53 VAL VAL ? . A 1 PRO 54 54 54 PRO PRO ? . A 1 GLN 55 55 55 GLN GLN ? . A 1 ASN 56 56 56 ASN ASN ? . A 1 ASN 57 57 57 ASN ASN ? . A 1 PRO 58 58 58 PRO PRO ? . A 1 GLU 59 59 59 GLU GLU ? . A 1 LEU 60 60 60 LEU LEU ? . A 1 GLN 61 61 61 GLN GLN ? . A 1 ALA 62 62 62 ALA ALA ? . A 1 HIS 63 63 63 HIS HIS ? . A 1 ALA 64 64 64 ALA ALA ? . A 1 GLY 65 65 65 GLY GLY ? . A 1 LYS 66 66 66 LYS LYS ? . A 1 VAL 67 67 67 VAL VAL ? . A 1 PHE 68 68 68 PHE PHE ? . A 1 LYS 69 69 69 LYS LYS ? . A 1 LEU 70 70 70 LEU LEU ? . A 1 VAL 71 71 71 VAL VAL ? . A 1 TYR 72 72 72 TYR TYR ? . A 1 GLU 73 73 73 GLU GLU ? . A 1 ALA 74 74 74 ALA ALA ? . A 1 ALA 75 75 75 ALA ALA ? . A 1 ILE 76 76 76 ILE ILE ? . A 1 GLN 77 77 77 GLN GLN ? . A 1 LEU 78 78 78 LEU LEU ? . A 1 GLU 79 79 79 GLU GLU ? . A 1 VAL 80 80 80 VAL VAL ? . A 1 THR 81 81 81 THR THR ? . A 1 GLY 82 82 82 GLY GLY ? . A 1 VAL 83 83 83 VAL VAL ? . A 1 VAL 84 84 84 VAL VAL ? . A 1 VAL 85 85 85 VAL VAL ? . A 1 THR 86 86 86 THR THR ? . A 1 ASP 87 87 87 ASP ASP ? . A 1 ALA 88 88 88 ALA ALA ? . A 1 THR 89 89 89 THR THR ? . A 1 LEU 90 90 90 LEU LEU ? . A 1 LYS 91 91 91 LYS LYS ? . A 1 ASN 92 92 92 ASN ASN ? . A 1 LEU 93 93 93 LEU LEU ? . A 1 GLY 94 94 94 GLY GLY ? . A 1 SER 95 95 95 SER SER ? . A 1 VAL 96 96 96 VAL VAL ? . A 1 HIS 97 97 97 HIS HIS ? . A 1 VAL 98 98 98 VAL VAL ? . A 1 SER 99 99 99 SER SER ? . A 1 LYS 100 100 100 LYS LYS ? . A 1 GLY 101 101 101 GLY GLY ? . A 1 VAL 102 102 102 VAL VAL ? . A 1 ALA 103 103 103 ALA ALA ? . A 1 ASP 104 104 104 ASP ASP ? . A 1 ALA 105 105 105 ALA ALA ? . A 1 HIS 106 106 106 HIS HIS ? . A 1 PHE 107 107 107 PHE PHE ? . A 1 PRO 108 108 108 PRO PRO ? . A 1 VAL 109 109 109 VAL VAL ? . A 1 VAL 110 110 110 VAL VAL ? . A 1 LYS 111 111 111 LYS LYS ? . A 1 GLU 112 112 112 GLU GLU ? . A 1 ALA 113 113 113 ALA ALA ? . A 1 ILE 114 114 114 ILE ILE ? . A 1 LEU 115 115 115 LEU LEU ? . A 1 LYS 116 116 116 LYS LYS ? . A 1 THR 117 117 117 THR THR ? . A 1 ILE 118 118 118 ILE ILE ? . A 1 LYS 119 119 119 LYS LYS ? . A 1 GLU 120 120 120 GLU GLU ? . A 1 VAL 121 121 121 VAL VAL ? . A 1 VAL 122 122 122 VAL VAL ? . A 1 GLY 123 123 123 GLY GLY ? . A 1 ALA 124 124 124 ALA ALA ? . A 1 LYS 125 125 125 LYS LYS ? . A 1 TRP 126 126 126 TRP TRP ? . A 1 SER 127 127 127 SER SER ? . A 1 GLU 128 128 128 GLU GLU ? . A 1 GLU 129 129 129 GLU GLU ? . A 1 LEU 130 130 130 LEU LEU ? . A 1 ASN 131 131 131 ASN ASN ? . A 1 SER 132 132 132 SER SER ? . A 1 ALA 133 133 133 ALA ALA ? . A 1 TRP 134 134 134 TRP TRP ? . A 1 THR 135 135 135 THR THR ? . A 1 ILE 136 136 136 ILE ILE ? . A 1 ALA 137 137 137 ALA ALA ? . A 1 TYR 138 138 138 TYR TYR ? . A 1 ASP 139 139 139 ASP ASP ? . A 1 GLU 140 140 140 GLU GLU ? . A 1 LEU 141 141 141 LEU LEU ? . A 1 ALA 142 142 142 ALA ALA ? . A 1 ILE 143 143 143 ILE ILE ? . A 1 VAL 144 144 144 VAL VAL ? . A 1 ILE 145 145 145 ILE ILE ? . A 1 LYS 146 146 146 LYS LYS ? . A 1 LYS 147 147 147 LYS LYS ? . A 1 GLU 148 148 148 GLU GLU ? . A 1 MET 149 149 149 MET MET ? . A 1 ASP 150 150 150 ASP ASP ? . A 1 ASP 151 151 151 ASP ASP ? . A 1 ALA 152 152 152 ALA ALA ? . A 1 ALA 153 153 153 ALA ALA ? . B 2 HEM 1 154 154 HEM HEM ? . C 3 OXY 1 155 155 OXY OXY ? . D 4 HOH 1 156 156 HOH HOH ? . D 4 HOH 2 157 157 HOH HOH ? . D 4 HOH 3 158 158 HOH HOH ? . D 4 HOH 4 159 159 HOH HOH ? . D 4 HOH 5 160 160 HOH HOH ? . D 4 HOH 6 161 161 HOH HOH ? . D 4 HOH 7 162 162 HOH HOH ? . D 4 HOH 8 163 163 HOH HOH ? . D 4 HOH 9 164 164 HOH HOH ? . D 4 HOH 10 165 165 HOH HOH ? . D 4 HOH 11 166 166 HOH HOH ? . D 4 HOH 12 167 167 HOH HOH ? . D 4 HOH 13 168 168 HOH HOH ? . D 4 HOH 14 169 169 HOH HOH ? . D 4 HOH 15 170 170 HOH HOH ? . D 4 HOH 16 171 171 HOH HOH ? . D 4 HOH 17 172 172 HOH HOH ? . D 4 HOH 18 173 173 HOH HOH ? . D 4 HOH 19 174 174 HOH HOH ? . D 4 HOH 20 175 175 HOH HOH ? . D 4 HOH 21 176 176 HOH HOH ? . D 4 HOH 22 177 177 HOH HOH ? . D 4 HOH 23 178 178 HOH HOH ? . D 4 HOH 24 179 179 HOH HOH ? . D 4 HOH 25 180 180 HOH HOH ? . D 4 HOH 26 181 181 HOH HOH ? . D 4 HOH 27 182 182 HOH HOH ? . D 4 HOH 28 183 183 HOH HOH ? . D 4 HOH 29 184 184 HOH HOH ? . D 4 HOH 30 185 185 HOH HOH ? . D 4 HOH 31 186 186 HOH HOH ? . D 4 HOH 32 187 187 HOH HOH ? . D 4 HOH 33 188 188 HOH HOH ? . D 4 HOH 34 189 189 HOH HOH ? . D 4 HOH 35 190 190 HOH HOH ? . D 4 HOH 36 191 191 HOH HOH ? . D 4 HOH 37 192 192 HOH HOH ? . D 4 HOH 38 193 193 HOH HOH ? . D 4 HOH 39 194 194 HOH HOH ? . D 4 HOH 40 195 195 HOH HOH ? . D 4 HOH 41 196 196 HOH HOH ? . D 4 HOH 42 197 197 HOH HOH ? . D 4 HOH 43 198 198 HOH HOH ? . D 4 HOH 44 200 200 HOH HOH ? . D 4 HOH 45 202 202 HOH HOH ? . D 4 HOH 46 203 203 HOH HOH ? . D 4 HOH 47 206 206 HOH HOH ? . D 4 HOH 48 208 208 HOH HOH ? . D 4 HOH 49 209 209 HOH HOH ? . D 4 HOH 50 210 210 HOH HOH ? . D 4 HOH 51 211 211 HOH HOH ? . D 4 HOH 52 213 213 HOH HOH ? . D 4 HOH 53 215 215 HOH HOH ? . D 4 HOH 54 216 216 HOH HOH ? . D 4 HOH 55 217 217 HOH HOH ? . D 4 HOH 56 218 218 HOH HOH ? . D 4 HOH 57 221 221 HOH HOH ? . D 4 HOH 58 222 222 HOH HOH ? . D 4 HOH 59 225 225 HOH HOH ? . D 4 HOH 60 226 226 HOH HOH ? . D 4 HOH 61 228 228 HOH HOH ? . D 4 HOH 62 230 230 HOH HOH ? . D 4 HOH 63 232 232 HOH HOH ? . D 4 HOH 64 234 234 HOH HOH ? . D 4 HOH 65 238 238 HOH HOH ? . D 4 HOH 66 239 239 HOH HOH ? . D 4 HOH 67 242 242 HOH HOH ? . D 4 HOH 68 244 244 HOH HOH ? . D 4 HOH 69 245 245 HOH HOH ? . D 4 HOH 70 246 246 HOH HOH ? . D 4 HOH 71 249 249 HOH HOH ? . D 4 HOH 72 251 251 HOH HOH ? . D 4 HOH 73 253 253 HOH HOH ? . D 4 HOH 74 254 254 HOH HOH ? . D 4 HOH 75 255 255 HOH HOH ? . D 4 HOH 76 256 256 HOH HOH ? . D 4 HOH 77 257 257 HOH HOH ? . D 4 HOH 78 258 258 HOH HOH ? . D 4 HOH 79 260 260 HOH HOH ? . D 4 HOH 80 262 262 HOH HOH ? . D 4 HOH 81 265 265 HOH HOH ? . D 4 HOH 82 266 266 HOH HOH ? . D 4 HOH 83 267 267 HOH HOH ? . D 4 HOH 84 268 268 HOH HOH ? . D 4 HOH 85 269 269 HOH HOH ? . D 4 HOH 86 271 271 HOH HOH ? . D 4 HOH 87 272 272 HOH HOH ? . D 4 HOH 88 273 273 HOH HOH ? . D 4 HOH 89 276 276 HOH HOH ? . D 4 HOH 90 277 277 HOH HOH ? . D 4 HOH 91 280 280 HOH HOH ? . D 4 HOH 92 281 281 HOH HOH ? . D 4 HOH 93 282 282 HOH HOH ? . D 4 HOH 94 287 287 HOH HOH ? . D 4 HOH 95 288 288 HOH HOH ? . D 4 HOH 96 290 290 HOH HOH ? . D 4 HOH 97 292 292 HOH HOH ? . D 4 HOH 98 293 293 HOH HOH ? . D 4 HOH 99 295 295 HOH HOH ? . D 4 HOH 100 296 296 HOH HOH ? . D 4 HOH 101 297 297 HOH HOH ? . D 4 HOH 102 300 300 HOH HOH ? . D 4 HOH 103 305 305 HOH HOH ? . D 4 HOH 104 307 307 HOH HOH ? . D 4 HOH 105 308 308 HOH HOH ? . D 4 HOH 106 310 310 HOH HOH ? . D 4 HOH 107 311 311 HOH HOH ? . D 4 HOH 108 312 312 HOH HOH ? . D 4 HOH 109 313 313 HOH HOH ? . D 4 HOH 110 314 314 HOH HOH ? . D 4 HOH 111 315 315 HOH HOH ? . D 4 HOH 112 316 316 HOH HOH ? . D 4 HOH 113 317 317 HOH HOH ? . D 4 HOH 114 318 318 HOH HOH ? . D 4 HOH 115 319 319 HOH HOH ? . D 4 HOH 116 321 321 HOH HOH ? . D 4 HOH 117 323 323 HOH HOH ? . D 4 HOH 118 324 324 HOH HOH ? . D 4 HOH 119 327 327 HOH HOH ? . D 4 HOH 120 328 328 HOH HOH ? . D 4 HOH 121 329 329 HOH HOH ? . D 4 HOH 122 330 330 HOH HOH ? . D 4 HOH 123 332 332 HOH HOH ? . D 4 HOH 124 334 334 HOH HOH ? . D 4 HOH 125 336 336 HOH HOH ? . D 4 HOH 126 337 337 HOH HOH ? . D 4 HOH 127 339 339 HOH HOH ? . D 4 HOH 128 342 342 HOH HOH ? . D 4 HOH 129 345 345 HOH HOH ? . D 4 HOH 130 346 346 HOH HOH ? . D 4 HOH 131 347 347 HOH HOH ? . D 4 HOH 132 348 348 HOH HOH ? . D 4 HOH 133 350 350 HOH HOH ? . D 4 HOH 134 354 354 HOH HOH ? . D 4 HOH 135 360 360 HOH HOH ? . D 4 HOH 136 362 362 HOH HOH ? . D 4 HOH 137 363 363 HOH HOH ? . D 4 HOH 138 365 365 HOH HOH ? . D 4 HOH 139 366 366 HOH HOH ? . D 4 HOH 140 367 367 HOH HOH ? . D 4 HOH 141 376 376 HOH HOH ? . D 4 HOH 142 378 378 HOH HOH ? . D 4 HOH 143 379 379 HOH HOH ? . D 4 HOH 144 380 380 HOH HOH ? . D 4 HOH 145 382 382 HOH HOH ? . D 4 HOH 146 384 384 HOH HOH ? . D 4 HOH 147 390 390 HOH HOH ? . D 4 HOH 148 391 391 HOH HOH ? . D 4 HOH 149 393 393 HOH HOH ? . D 4 HOH 150 395 395 HOH HOH ? . D 4 HOH 151 397 397 HOH HOH ? . D 4 HOH 152 398 398 HOH HOH ? . D 4 HOH 153 399 399 HOH HOH ? . D 4 HOH 154 403 403 HOH HOH ? . D 4 HOH 155 410 410 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-02-27 2 'Structure model' 1 1 1995-10-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _software.name PROLSQ _software.classification refinement _software.version 1GDM _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C . ALA 2 ? ? N . LEU 3 ? ? 1.26 2 1 C . LYS 100 ? ? N . GLY 101 ? ? 1.26 3 1 C . THR 4 ? ? N . GLU 5 ? ? 1.27 4 1 C . GLU 79 ? ? N . VAL 80 ? ? 1.27 5 1 C . THR 86 ? ? N . ASP 87 ? ? 1.28 6 1 C . THR 135 ? ? N . ILE 136 ? ? 1.29 7 1 C . ILE 76 ? ? N . GLN 77 ? ? 1.29 8 1 C . GLY 65 ? ? N . LYS 66 ? ? 1.29 9 1 C . LYS 12 ? ? N . SER 13 ? ? 1.29 10 1 C . ASP 42 ? ? N . LEU 43 ? ? 1.29 11 1 C . PHE 68 ? ? N . LYS 69 ? ? 1.29 12 1 C . ALA 75 ? ? N . ILE 76 ? ? 1.30 13 1 C . LEU 3 ? ? N . THR 4 ? ? 1.30 14 1 C . LYS 66 ? ? N . VAL 67 ? ? 1.30 15 1 C . LYS 147 ? ? N . GLU 148 ? ? 1.30 16 1 C . LYS 24 ? ? N . HIS 25 ? ? 1.30 17 1 C . ASN 57 ? ? N . PRO 58 ? ? 1.30 18 1 C . ALA 113 ? ? N . ILE 114 ? ? 1.30 19 1 C . LEU 10 ? ? N . VAL 11 ? ? 1.30 20 1 C . MET 149 ? ? N . ASP 150 ? ? 1.30 21 1 C . LEU 47 ? ? N . LYS 48 ? ? 1.30 22 1 C . GLN 61 ? ? N . ALA 62 ? ? 1.30 23 1 C . ALA 8 ? ? N . ALA 9 ? ? 1.30 24 1 C . ASN 131 ? ? N . SER 132 ? ? 1.30 25 1 C . VAL 67 ? ? N . PHE 68 ? ? 1.30 26 1 C . ASP 139 ? ? N . GLU 140 ? ? 1.30 27 1 C . ILE 31 ? ? N . LEU 32 ? ? 1.30 28 1 C . PHE 18 ? ? N . ASN 19 ? ? 1.30 29 1 C . SER 99 ? ? N . LYS 100 ? ? 1.31 30 1 C . GLU 59 ? ? N . LEU 60 ? ? 1.31 31 1 C . PHE 44 ? ? N . SER 45 ? ? 1.31 32 1 C . LEU 78 ? ? N . GLU 79 ? ? 1.31 33 1 C . ALA 64 ? ? N . GLY 65 ? ? 1.31 34 1 C . ASN 56 ? ? N . ASN 57 ? ? 1.31 35 1 C . TYR 138 ? ? N . ASP 139 ? ? 1.31 36 1 C . ASN 21 ? ? N . ILE 22 ? ? 1.31 37 1 C . SER 45 ? ? N . PHE 46 ? ? 1.31 38 1 C . ALA 88 ? ? N . THR 89 ? ? 1.31 39 1 C . LYS 146 ? ? N . LYS 147 ? ? 1.31 40 1 C . ASN 19 ? ? N . ALA 20 ? ? 1.31 41 1 C . ALA 37 ? ? N . PRO 38 ? ? 1.31 42 1 C . ALA 152 ? ? N . ALA 153 ? ? 1.31 43 1 C . VAL 84 ? ? N . VAL 85 ? ? 1.31 44 1 C . PHE 30 ? ? N . ILE 31 ? ? 1.31 45 1 C . GLY 82 ? ? N . VAL 83 ? ? 1.31 46 1 C . GLY 49 ? ? N . THR 50 ? ? 1.31 47 1 C . VAL 102 ? ? N . ALA 103 ? ? 1.31 48 1 C . ASP 150 ? ? N . ASP 151 ? ? 1.31 49 1 C . HIS 97 ? ? N . VAL 98 ? ? 1.31 50 1 C . LEU 130 ? ? N . ASN 131 ? ? 1.32 51 1 C . LYS 41 ? ? N . ASP 42 ? ? 1.32 52 1 C . TYR 72 ? ? N . GLU 73 ? ? 1.32 53 1 C . LEU 43 ? ? N . PHE 44 ? ? 1.32 54 1 C . GLY 123 ? ? N . ALA 124 ? ? 1.32 55 1 C . LYS 116 ? ? N . THR 117 ? ? 1.32 56 1 C . LYS 69 ? ? N . LEU 70 ? ? 1.32 57 1 C . ALA 105 ? ? N . HIS 106 ? ? 1.32 58 1 C . HIS 106 ? ? N . PHE 107 ? ? 1.32 59 1 C . ALA 40 ? ? N . LYS 41 ? ? 1.32 60 1 C . VAL 98 ? ? N . SER 99 ? ? 1.32 61 1 C . ILE 136 ? ? N . ALA 137 ? ? 1.32 62 1 C . LYS 48 ? ? N . GLY 49 ? ? 1.32 63 1 C . THR 50 ? ? N . SER 51 ? ? 1.32 64 1 C . ILE 22 ? ? N . PRO 23 ? ? 1.32 65 1 C . TRP 15 ? ? N . GLU 16 ? ? 1.32 66 1 C . PHE 107 ? ? N . PRO 108 ? ? 1.32 67 1 C . ALA 74 ? ? N . ALA 75 ? ? 1.32 68 1 C . ALA 62 ? ? N . HIS 63 ? ? 1.32 69 1 C . VAL 85 ? ? N . THR 86 ? ? 1.32 70 1 C . LEU 115 ? ? N . LYS 116 ? ? 1.32 71 1 C . GLU 148 ? ? N . MET 149 ? ? 1.32 72 1 C . VAL 11 ? ? N . LYS 12 ? ? 1.32 73 1 C . GLY 94 ? ? N . SER 95 ? ? 1.32 74 1 C . GLN 55 ? ? N . ASN 56 ? ? 1.32 75 1 C . ASP 151 ? ? N . ALA 152 ? ? 1.32 76 1 C . VAL 83 ? ? N . VAL 84 ? ? 1.32 77 1 C . SER 132 ? ? N . ALA 133 ? ? 1.32 78 1 C . GLY 1 ? ? N . ALA 2 ? ? 1.32 79 1 C . GLU 17 ? ? N . PHE 18 ? ? 1.32 80 1 C . GLN 7 ? ? N . ALA 8 ? ? 1.32 81 1 C . THR 89 ? ? N . LEU 90 ? ? 1.32 82 1 C . SER 6 ? ? N . GLN 7 ? ? 1.32 83 1 C . SER 95 ? ? N . VAL 96 ? ? 1.32 84 1 C . GLU 140 ? ? N . LEU 141 ? ? 1.33 85 1 C . GLU 73 ? ? N . ALA 74 ? ? 1.33 86 1 C . LYS 125 ? ? N . TRP 126 ? ? 1.33 87 1 C . SER 14 ? ? N . TRP 15 ? ? 1.33 88 1 C . ALA 39 ? ? N . ALA 40 ? ? 1.33 89 1 C . GLU 16 ? ? N . GLU 17 ? ? 1.33 90 1 C . ARG 28 ? ? N . PHE 29 ? ? 1.33 91 1 C . ALA 142 ? ? N . ILE 143 ? ? 1.33 92 1 C . GLU 35 ? ? N . ILE 36 ? ? 1.33 93 1 C . ALA 124 ? ? N . LYS 125 ? ? 1.33 94 1 C . ALA 137 ? ? N . TYR 138 ? ? 1.33 95 1 C . SER 51 ? ? N . GLU 52 ? ? 1.33 96 1 C . THR 26 ? ? N . HIS 27 ? ? 1.33 97 1 C . GLU 5 ? ? N . SER 6 ? ? 1.33 98 1 C . ILE 143 ? ? N . VAL 144 ? ? 1.33 99 1 C . LEU 93 ? ? N . GLY 94 ? ? 1.33 100 1 C . HIS 25 ? ? N . THR 26 ? ? 1.33 101 1 C . LEU 90 ? ? N . LYS 91 ? ? 1.33 102 1 C . LEU 34 ? ? N . GLU 35 ? ? 1.33 103 1 C . ALA 103 ? ? N . ASP 104 ? ? 1.33 104 1 C . LYS 91 ? ? N . ASN 92 ? ? 1.33 105 1 C . ASP 87 ? ? N . ALA 88 ? ? 1.34 106 1 C . GLY 101 ? ? N . VAL 102 ? ? 1.34 107 1 C . LEU 141 ? ? N . ALA 142 ? ? 1.34 108 1 C . LYS 119 ? ? N . GLU 120 ? ? 1.34 109 1 C . LEU 60 ? ? N . GLN 61 ? ? 1.34 110 1 C . ALA 9 ? ? N . LEU 10 ? ? 1.34 111 1 C . VAL 71 ? ? N . TYR 72 ? ? 1.34 112 1 C . PHE 46 ? ? N . LEU 47 ? ? 1.34 113 1 C . GLU 129 ? ? N . LEU 130 ? ? 1.34 114 1 C . THR 117 ? ? N . ILE 118 ? ? 1.34 115 1 C . VAL 109 ? ? N . VAL 110 ? ? 1.34 116 1 C . ILE 145 ? ? N . LYS 146 ? ? 1.34 117 1 C . PRO 58 ? ? N . GLU 59 ? ? 1.34 118 1 C . ILE 118 ? ? N . LYS 119 ? ? 1.34 119 1 C . GLU 120 ? ? N . VAL 121 ? ? 1.34 120 1 C . PHE 29 ? ? N . PHE 30 ? ? 1.34 121 1 C . PRO 54 ? ? N . GLN 55 ? ? 1.34 122 1 C . GLN 77 ? ? N . LEU 78 ? ? 1.34 123 1 C . LEU 32 ? ? N . VAL 33 ? ? 1.34 124 1 C . VAL 144 ? ? N . ILE 145 ? ? 1.34 125 1 C . GLU 128 ? ? N . GLU 129 ? ? 1.34 126 1 C . GLU 52 ? ? N . VAL 53 ? ? 1.34 127 1 C . VAL 110 ? ? N . LYS 111 ? ? 1.34 128 1 C . PRO 38 ? ? N . ALA 39 ? ? 1.34 129 1 C . ALA 133 ? ? N . TRP 134 ? ? 1.34 130 1 C . VAL 96 ? ? N . HIS 97 ? ? 1.34 131 1 C . VAL 80 ? ? N . THR 81 ? ? 1.34 132 1 C . ASN 92 ? ? N . LEU 93 ? ? 1.34 133 1 C . PRO 23 ? ? N . LYS 24 ? ? 1.35 134 1 C . ALA 20 ? ? N . ASN 21 ? ? 1.35 135 1 C . VAL 53 ? ? N . PRO 54 ? ? 1.35 136 1 C . GLU 112 ? ? N . ALA 113 ? ? 1.35 137 1 C . TRP 126 ? ? N . SER 127 ? ? 1.35 138 1 C . LEU 70 ? ? N . VAL 71 ? ? 1.35 139 1 C . ASP 104 ? ? N . ALA 105 ? ? 1.35 140 1 C . VAL 121 ? ? N . VAL 122 ? ? 1.35 141 1 C . VAL 122 ? ? N . GLY 123 ? ? 1.35 142 1 C . ILE 114 ? ? N . LEU 115 ? ? 1.36 143 1 C . HIS 27 ? ? N . ARG 28 ? ? 1.36 144 1 C . SER 13 ? ? N . SER 14 ? ? 1.36 145 1 C . HIS 63 ? ? N . ALA 64 ? ? 1.36 146 1 C . VAL 33 ? ? N . LEU 34 ? ? 1.36 147 1 C . SER 127 ? ? N . GLU 128 ? ? 1.37 148 1 C . LYS 111 ? ? N . GLU 112 ? ? 1.37 149 1 C . THR 81 ? ? N . GLY 82 ? ? 1.37 150 1 C . ILE 36 ? ? N . ALA 37 ? ? 1.37 151 1 C . PRO 108 ? ? N . VAL 109 ? ? 1.38 152 1 C . TRP 134 ? ? N . THR 135 ? ? 1.38 153 1 FE . HEM 154 ? ? O1 . OXY 155 ? ? 1.82 154 1 O . ALA 2 ? ? N . LEU 3 ? ? 2.06 155 1 NE2 . HIS 97 ? ? FE . HEM 154 ? ? 2.09 156 1 O . LYS 100 ? ? N . GLY 101 ? ? 2.18 157 1 O . GLU 79 ? ? N . VAL 80 ? ? 2.18 158 1 O . THR 135 ? ? N . ILE 136 ? ? 2.19 159 1 O . GLN 77 ? ? N . LEU 78 ? ? 2.19 160 1 O . GLU 148 ? ? N . MET 149 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O . HOH 313 ? ? 1_555 O . HOH 314 ? ? 2_657 1.53 2 1 O . HOH 313 ? ? 1_555 O . HOH 337 ? ? 2_657 2.04 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 . GLY 1 ? OXT ? A GLY 1 OXT 2 1 N 1 . ALA 2 ? OXT ? A ALA 2 OXT 3 1 N 1 . LEU 3 ? OXT ? A LEU 3 OXT 4 1 N 1 . THR 4 ? OXT ? A THR 4 OXT 5 1 N 1 . GLU 5 ? OXT ? A GLU 5 OXT 6 1 N 1 . SER 6 ? OXT ? A SER 6 OXT 7 1 N 1 . GLN 7 ? OXT ? A GLN 7 OXT 8 1 N 1 . ALA 8 ? OXT ? A ALA 8 OXT 9 1 N 1 . ALA 9 ? OXT ? A ALA 9 OXT 10 1 N 1 . LEU 10 ? OXT ? A LEU 10 OXT 11 1 N 1 . VAL 11 ? OXT ? A VAL 11 OXT 12 1 N 1 . LYS 12 ? OXT ? A LYS 12 OXT 13 1 N 1 . SER 13 ? OXT ? A SER 13 OXT 14 1 N 1 . SER 14 ? OXT ? A SER 14 OXT 15 1 N 1 . TRP 15 ? OXT ? A TRP 15 OXT 16 1 N 1 . GLU 16 ? OXT ? A GLU 16 OXT 17 1 N 1 . GLU 17 ? OXT ? A GLU 17 OXT 18 1 N 1 . PHE 18 ? OXT ? A PHE 18 OXT 19 1 N 1 . ASN 19 ? OXT ? A ASN 19 OXT 20 1 N 1 . ALA 20 ? OXT ? A ALA 20 OXT 21 1 N 1 . ASN 21 ? OXT ? A ASN 21 OXT 22 1 N 1 . ILE 22 ? OXT ? A ILE 22 OXT 23 1 N 1 . PRO 23 ? OXT ? A PRO 23 OXT 24 1 N 1 . LYS 24 ? OXT ? A LYS 24 OXT 25 1 N 1 . HIS 25 ? OXT ? A HIS 25 OXT 26 1 N 1 . THR 26 ? OXT ? A THR 26 OXT 27 1 N 1 . HIS 27 ? OXT ? A HIS 27 OXT 28 1 N 1 . ARG 28 ? OXT ? A ARG 28 OXT 29 1 N 1 . PHE 29 ? OXT ? A PHE 29 OXT 30 1 N 1 . PHE 30 ? OXT ? A PHE 30 OXT 31 1 N 1 . ILE 31 ? OXT ? A ILE 31 OXT 32 1 N 1 . LEU 32 ? OXT ? A LEU 32 OXT 33 1 N 1 . VAL 33 ? OXT ? A VAL 33 OXT 34 1 N 1 . LEU 34 ? OXT ? A LEU 34 OXT 35 1 N 1 . GLU 35 ? OXT ? A GLU 35 OXT 36 1 N 1 . ILE 36 ? OXT ? A ILE 36 OXT 37 1 N 1 . ALA 37 ? OXT ? A ALA 37 OXT 38 1 N 1 . PRO 38 ? OXT ? A PRO 38 OXT 39 1 N 1 . ALA 39 ? OXT ? A ALA 39 OXT 40 1 N 1 . ALA 40 ? OXT ? A ALA 40 OXT 41 1 N 1 . LYS 41 ? OXT ? A LYS 41 OXT 42 1 N 1 . ASP 42 ? OXT ? A ASP 42 OXT 43 1 N 1 . LEU 43 ? OXT ? A LEU 43 OXT 44 1 N 1 . PHE 44 ? OXT ? A PHE 44 OXT 45 1 N 1 . SER 45 ? OXT ? A SER 45 OXT 46 1 N 1 . PHE 46 ? OXT ? A PHE 46 OXT 47 1 N 1 . LEU 47 ? OXT ? A LEU 47 OXT 48 1 N 1 . LYS 48 ? OXT ? A LYS 48 OXT 49 1 N 1 . GLY 49 ? OXT ? A GLY 49 OXT 50 1 N 1 . THR 50 ? OXT ? A THR 50 OXT 51 1 N 1 . SER 51 ? OXT ? A SER 51 OXT 52 1 N 1 . GLU 52 ? OXT ? A GLU 52 OXT 53 1 N 1 . VAL 53 ? OXT ? A VAL 53 OXT 54 1 N 1 . PRO 54 ? OXT ? A PRO 54 OXT 55 1 N 1 . GLN 55 ? OXT ? A GLN 55 OXT 56 1 N 1 . ASN 56 ? OXT ? A ASN 56 OXT 57 1 N 1 . ASN 57 ? OXT ? A ASN 57 OXT 58 1 N 1 . PRO 58 ? OXT ? A PRO 58 OXT 59 1 N 1 . GLU 59 ? OXT ? A GLU 59 OXT 60 1 N 1 . LEU 60 ? OXT ? A LEU 60 OXT 61 1 N 1 . GLN 61 ? OXT ? A GLN 61 OXT 62 1 N 1 . ALA 62 ? OXT ? A ALA 62 OXT 63 1 N 1 . HIS 63 ? OXT ? A HIS 63 OXT 64 1 N 1 . ALA 64 ? OXT ? A ALA 64 OXT 65 1 N 1 . GLY 65 ? OXT ? A GLY 65 OXT 66 1 N 1 . LYS 66 ? OXT ? A LYS 66 OXT 67 1 N 1 . VAL 67 ? OXT ? A VAL 67 OXT 68 1 N 1 . PHE 68 ? OXT ? A PHE 68 OXT 69 1 N 1 . LYS 69 ? OXT ? A LYS 69 OXT 70 1 N 1 . LEU 70 ? OXT ? A LEU 70 OXT 71 1 N 1 . VAL 71 ? OXT ? A VAL 71 OXT 72 1 N 1 . TYR 72 ? OXT ? A TYR 72 OXT 73 1 N 1 . GLU 73 ? OXT ? A GLU 73 OXT 74 1 N 1 . ALA 74 ? OXT ? A ALA 74 OXT 75 1 N 1 . ALA 75 ? OXT ? A ALA 75 OXT 76 1 N 1 . ILE 76 ? OXT ? A ILE 76 OXT 77 1 N 1 . GLN 77 ? OXT ? A GLN 77 OXT 78 1 N 1 . LEU 78 ? OXT ? A LEU 78 OXT 79 1 N 1 . GLU 79 ? OXT ? A GLU 79 OXT 80 1 N 1 . VAL 80 ? OXT ? A VAL 80 OXT 81 1 N 1 . THR 81 ? OXT ? A THR 81 OXT 82 1 N 1 . GLY 82 ? OXT ? A GLY 82 OXT 83 1 N 1 . VAL 83 ? OXT ? A VAL 83 OXT 84 1 N 1 . VAL 84 ? OXT ? A VAL 84 OXT 85 1 N 1 . VAL 85 ? OXT ? A VAL 85 OXT 86 1 N 1 . THR 86 ? OXT ? A THR 86 OXT 87 1 N 1 . ASP 87 ? OXT ? A ASP 87 OXT 88 1 N 1 . ALA 88 ? OXT ? A ALA 88 OXT 89 1 N 1 . THR 89 ? OXT ? A THR 89 OXT 90 1 N 1 . LEU 90 ? OXT ? A LEU 90 OXT 91 1 N 1 . LYS 91 ? OXT ? A LYS 91 OXT 92 1 N 1 . ASN 92 ? OXT ? A ASN 92 OXT 93 1 N 1 . LEU 93 ? OXT ? A LEU 93 OXT 94 1 N 1 . GLY 94 ? OXT ? A GLY 94 OXT 95 1 N 1 . SER 95 ? OXT ? A SER 95 OXT 96 1 N 1 . VAL 96 ? OXT ? A VAL 96 OXT 97 1 N 1 . HIS 97 ? OXT ? A HIS 97 OXT 98 1 N 1 . VAL 98 ? OXT ? A VAL 98 OXT 99 1 N 1 . SER 99 ? OXT ? A SER 99 OXT 100 1 N 1 . LYS 100 ? OXT ? A LYS 100 OXT 101 1 N 1 . GLY 101 ? OXT ? A GLY 101 OXT 102 1 N 1 . VAL 102 ? OXT ? A VAL 102 OXT 103 1 N 1 . ALA 103 ? OXT ? A ALA 103 OXT 104 1 N 1 . ASP 104 ? OXT ? A ASP 104 OXT 105 1 N 1 . ALA 105 ? OXT ? A ALA 105 OXT 106 1 N 1 . HIS 106 ? OXT ? A HIS 106 OXT 107 1 N 1 . PHE 107 ? OXT ? A PHE 107 OXT 108 1 N 1 . PRO 108 ? OXT ? A PRO 108 OXT 109 1 N 1 . VAL 109 ? OXT ? A VAL 109 OXT 110 1 N 1 . VAL 110 ? OXT ? A VAL 110 OXT 111 1 N 1 . LYS 111 ? OXT ? A LYS 111 OXT 112 1 N 1 . GLU 112 ? OXT ? A GLU 112 OXT 113 1 N 1 . ALA 113 ? OXT ? A ALA 113 OXT 114 1 N 1 . ILE 114 ? OXT ? A ILE 114 OXT 115 1 N 1 . LEU 115 ? OXT ? A LEU 115 OXT 116 1 N 1 . LYS 116 ? OXT ? A LYS 116 OXT 117 1 N 1 . THR 117 ? OXT ? A THR 117 OXT 118 1 N 1 . ILE 118 ? OXT ? A ILE 118 OXT 119 1 N 1 . LYS 119 ? OXT ? A LYS 119 OXT 120 1 N 1 . GLU 120 ? OXT ? A GLU 120 OXT 121 1 N 1 . VAL 121 ? OXT ? A VAL 121 OXT 122 1 N 1 . VAL 122 ? OXT ? A VAL 122 OXT 123 1 N 1 . GLY 123 ? OXT ? A GLY 123 OXT 124 1 N 1 . ALA 124 ? OXT ? A ALA 124 OXT 125 1 N 1 . LYS 125 ? OXT ? A LYS 125 OXT 126 1 N 1 . TRP 126 ? OXT ? A TRP 126 OXT 127 1 N 1 . SER 127 ? OXT ? A SER 127 OXT 128 1 N 1 . GLU 128 ? OXT ? A GLU 128 OXT 129 1 N 1 . GLU 129 ? OXT ? A GLU 129 OXT 130 1 N 1 . LEU 130 ? OXT ? A LEU 130 OXT 131 1 N 1 . ASN 131 ? OXT ? A ASN 131 OXT 132 1 N 1 . SER 132 ? OXT ? A SER 132 OXT 133 1 N 1 . ALA 133 ? OXT ? A ALA 133 OXT 134 1 N 1 . TRP 134 ? OXT ? A TRP 134 OXT 135 1 N 1 . THR 135 ? OXT ? A THR 135 OXT 136 1 N 1 . ILE 136 ? OXT ? A ILE 136 OXT 137 1 N 1 . ALA 137 ? OXT ? A ALA 137 OXT 138 1 N 1 . TYR 138 ? OXT ? A TYR 138 OXT 139 1 N 1 . ASP 139 ? OXT ? A ASP 139 OXT 140 1 N 1 . GLU 140 ? OXT ? A GLU 140 OXT 141 1 N 1 . LEU 141 ? OXT ? A LEU 141 OXT 142 1 N 1 . ALA 142 ? OXT ? A ALA 142 OXT 143 1 N 1 . ILE 143 ? OXT ? A ILE 143 OXT 144 1 N 1 . VAL 144 ? OXT ? A VAL 144 OXT 145 1 N 1 . ILE 145 ? OXT ? A ILE 145 OXT 146 1 N 1 . LYS 146 ? OXT ? A LYS 146 OXT 147 1 N 1 . LYS 147 ? OXT ? A LYS 147 OXT 148 1 N 1 . GLU 148 ? OXT ? A GLU 148 OXT 149 1 N 1 . MET 149 ? OXT ? A MET 149 OXT 150 1 N 1 . ASP 150 ? OXT ? A ASP 150 OXT 151 1 N 1 . ASP 151 ? OXT ? A ASP 151 OXT 152 1 N 1 . ALA 152 ? OXT ? A ALA 152 OXT 153 1 N 1 . ALA 153 ? OXT ? A ALA 153 OXT 154 1 N 1 . HEM 154 ? NA ? B HEM 1 NA 155 1 N 1 . HEM 154 ? NB ? B HEM 1 NB 156 1 N 1 . HEM 154 ? NC ? B HEM 1 NC 157 1 N 1 . HEM 154 ? ND ? B HEM 1 ND # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 1 GLYCINE GLY 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'OXYGEN MOLECULE' OXY 4 water HOH #