data_1GE6 # _entry.id 1GE6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GE6 RCSB RCSB005066 WWPDB D_1000005066 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1G12 '1G12 contains the same enzyme with different crystal form.' unspecified PDB 1GE5 '1GE5 contains the same enzyme with different crystal form.' unspecified PDB 1GE7 '1GE7 contains the same enzyme with different crystal form.' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GE6 _pdbx_database_status.recvd_initial_deposition_date 2000-10-11 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hori, T.' 1 'Kumasaka, T.' 2 'Yamamoto, M.' 3 'Nonaka, T.' 4 'Tanaka, N.' 5 'Hashimoto, Y.' 6 'Ueki, T.' 7 'Takio, K.' 8 # _citation.id primary _citation.title ;Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 57 _citation.page_first 361 _citation.page_last 368 _citation.year 2001 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11223512 _citation.pdbx_database_id_DOI 10.1107/S0907444900019740 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hori, T.' 1 ? primary 'Kumasaka, T.' 2 ? primary 'Yamamoto, M.' 3 ? primary 'Nonaka, N.' 4 ? primary 'Tanaka, N.' 5 ? primary 'Hashimoto, Y.' 6 ? primary 'Ueki, U.' 7 ? primary 'Takio, K.' 8 ? # _cell.entry_id 1GE6 _cell.length_a 58.650 _cell.length_b 58.650 _cell.length_c 145.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GE6 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PEPTIDYL-LYS METALLOENDOPEPTIDASE' 18058.424 1 3.4.24.20 ? ? ? 2 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 water nat water 18.015 145 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TYNGCSSSEQSALAAAASAAQSYVAESLSYLQTHTAATPRYTTWFGSYISSRHSTVLQHYTDMNSNDFSSYSFDCTCTAA GTFAYVYPNRFGTVYLCGAFWKAPTTGTDSQAGTLVHESSHFTRNGGTKDYAYGQAAAKSLATMDPDKAVMNADNHEYFS ENNPAQS ; _entity_poly.pdbx_seq_one_letter_code_can ;TYNGCSSSEQSALAAAASAAQSYVAESLSYLQTHTAATPRYTTWFGSYISSRHSTVLQHYTDMNSNDFSSYSFDCTCTAA GTFAYVYPNRFGTVYLCGAFWKAPTTGTDSQAGTLVHESSHFTRNGGTKDYAYGQAAAKSLATMDPDKAVMNADNHEYFS ENNPAQS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 TYR n 1 3 ASN n 1 4 GLY n 1 5 CYS n 1 6 SER n 1 7 SER n 1 8 SER n 1 9 GLU n 1 10 GLN n 1 11 SER n 1 12 ALA n 1 13 LEU n 1 14 ALA n 1 15 ALA n 1 16 ALA n 1 17 ALA n 1 18 SER n 1 19 ALA n 1 20 ALA n 1 21 GLN n 1 22 SER n 1 23 TYR n 1 24 VAL n 1 25 ALA n 1 26 GLU n 1 27 SER n 1 28 LEU n 1 29 SER n 1 30 TYR n 1 31 LEU n 1 32 GLN n 1 33 THR n 1 34 HIS n 1 35 THR n 1 36 ALA n 1 37 ALA n 1 38 THR n 1 39 PRO n 1 40 ARG n 1 41 TYR n 1 42 THR n 1 43 THR n 1 44 TRP n 1 45 PHE n 1 46 GLY n 1 47 SER n 1 48 TYR n 1 49 ILE n 1 50 SER n 1 51 SER n 1 52 ARG n 1 53 HIS n 1 54 SER n 1 55 THR n 1 56 VAL n 1 57 LEU n 1 58 GLN n 1 59 HIS n 1 60 TYR n 1 61 THR n 1 62 ASP n 1 63 MET n 1 64 ASN n 1 65 SER n 1 66 ASN n 1 67 ASP n 1 68 PHE n 1 69 SER n 1 70 SER n 1 71 TYR n 1 72 SER n 1 73 PHE n 1 74 ASP n 1 75 CYS n 1 76 THR n 1 77 CYS n 1 78 THR n 1 79 ALA n 1 80 ALA n 1 81 GLY n 1 82 THR n 1 83 PHE n 1 84 ALA n 1 85 TYR n 1 86 VAL n 1 87 TYR n 1 88 PRO n 1 89 ASN n 1 90 ARG n 1 91 PHE n 1 92 GLY n 1 93 THR n 1 94 VAL n 1 95 TYR n 1 96 LEU n 1 97 CYS n 1 98 GLY n 1 99 ALA n 1 100 PHE n 1 101 TRP n 1 102 LYS n 1 103 ALA n 1 104 PRO n 1 105 THR n 1 106 THR n 1 107 GLY n 1 108 THR n 1 109 ASP n 1 110 SER n 1 111 GLN n 1 112 ALA n 1 113 GLY n 1 114 THR n 1 115 LEU n 1 116 VAL n 1 117 HIS n 1 118 GLU n 1 119 SER n 1 120 SER n 1 121 HIS n 1 122 PHE n 1 123 THR n 1 124 ARG n 1 125 ASN n 1 126 GLY n 1 127 GLY n 1 128 THR n 1 129 LYS n 1 130 ASP n 1 131 TYR n 1 132 ALA n 1 133 TYR n 1 134 GLY n 1 135 GLN n 1 136 ALA n 1 137 ALA n 1 138 ALA n 1 139 LYS n 1 140 SER n 1 141 LEU n 1 142 ALA n 1 143 THR n 1 144 MET n 1 145 ASP n 1 146 PRO n 1 147 ASP n 1 148 LYS n 1 149 ALA n 1 150 VAL n 1 151 MET n 1 152 ASN n 1 153 ALA n 1 154 ASP n 1 155 ASN n 1 156 HIS n 1 157 GLU n 1 158 TYR n 1 159 PHE n 1 160 SER n 1 161 GLU n 1 162 ASN n 1 163 ASN n 1 164 PRO n 1 165 ALA n 1 166 GLN n 1 167 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Grifola frondosa' _entity_src_nat.pdbx_ncbi_taxonomy_id 5627 _entity_src_nat.genus Grifola _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'FRUITING BODY' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_code PLMP_GRIFR _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P81054 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1GE6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 167 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P81054 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 167 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 167 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1GE6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.35 _exptl_crystal.density_Matthews 2.00 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'sodium chloride , pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1998-11-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.pdbx_wavelength 1.04 _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1GE6 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 27.2 _reflns.d_resolution_high 2.2 _reflns.number_obs 50233 _reflns.number_all 70869 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.2 _reflns.B_iso_Wilson_estimate 16.2 _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.184 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 5.8 _reflns_shell.number_unique_all 975 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1GE6 _refine.ls_number_reflns_obs 50233 _refine.ls_number_reflns_all 70869 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 27.2 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs 92.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 384 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1240 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1397 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 27.2 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.12 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1GE6 _struct.title 'ZINC PEPTIDASE FROM GRIFOLA FRONDOSA' _struct.pdbx_descriptor 'PEPTIDYL-LYS METALLOENDOPEPTIDASE(E.C.3.4.24.20)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GE6 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'zinc coordinate, METALLOPROTEASE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? HIS A 34 ? SER A 6 HIS A 34 1 ? 29 HELX_P HELX_P2 2 THR A 38 ? GLY A 46 ? THR A 38 GLY A 46 1 ? 9 HELX_P HELX_P3 3 ILE A 49 ? ASN A 66 ? ILE A 49 ASN A 66 1 ? 18 HELX_P HELX_P4 4 ASP A 67 ? TYR A 71 ? ASP A 67 TYR A 71 5 ? 5 HELX_P HELX_P5 5 CYS A 97 ? ALA A 103 ? CYS A 97 ALA A 103 1 ? 7 HELX_P HELX_P6 6 SER A 110 ? PHE A 122 ? SER A 110 PHE A 122 1 ? 13 HELX_P HELX_P7 7 THR A 123 ? GLY A 126 ? THR A 123 GLY A 126 5 ? 4 HELX_P HELX_P8 8 GLY A 134 ? ASP A 145 ? GLY A 134 ASP A 145 1 ? 12 HELX_P HELX_P9 9 ASP A 145 ? VAL A 150 ? ASP A 145 VAL A 150 1 ? 6 HELX_P HELX_P10 10 ASN A 152 ? ASN A 162 ? ASN A 152 ASN A 162 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 75 SG ? ? A CYS 5 A CYS 75 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 77 A CYS 97 1_555 ? ? ? ? ? ? ? 2.038 ? ? covale1 covale one ? A THR 42 OG1 ? ? ? 1_555 B MAN . C1 ? ? A THR 42 A MAN 900 1_555 ? ? ? ? ? ? ? 1.484 ? O-Glycosylation metalc1 metalc ? ? A HIS 117 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 117 A ZN 200 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc2 metalc ? ? A HIS 121 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 121 A ZN 200 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc3 metalc ? ? A ASP 130 OD1 ? ? ? 1_555 C ZN . ZN ? ? A ASP 130 A ZN 200 1_555 ? ? ? ? ? ? ? 2.138 ? ? metalc4 metalc ? ? A ASP 130 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 130 A ZN 200 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 200 A HOH 346 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 200 A HOH 513 1_555 ? ? ? ? ? ? ? 2.552 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 163 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 163 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 164 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 164 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.09 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 72 ? ASP A 74 ? SER A 72 ASP A 74 A 2 THR A 93 ? LEU A 96 ? THR A 93 LEU A 96 A 3 ALA A 84 ? TYR A 85 ? ALA A 84 TYR A 85 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 72 ? O SER A 72 N VAL A 94 ? N VAL A 94 A 2 3 N TYR A 95 ? N TYR A 95 O TYR A 85 ? O TYR A 85 # _database_PDB_matrix.entry_id 1GE6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GE6 _atom_sites.fract_transf_matrix[1][1] 0.017050 _atom_sites.fract_transf_matrix[1][2] 0.009844 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019688 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006888 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? A . n A 1 2 TYR 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 GLY 4 4 ? ? ? A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 TRP 44 44 44 TRP TRP A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 MET 63 63 63 MET MET A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 HIS 121 121 121 HIS HIS A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 MET 144 144 144 MET MET A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 MET 151 151 151 MET MET A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 SER 167 167 167 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MAN 1 900 900 MAN MAN A . C 3 ZN 1 200 200 ZN ZN A . D 4 HOH 1 301 301 HOH WAT A . D 4 HOH 2 302 302 HOH WAT A . D 4 HOH 3 303 303 HOH WAT A . D 4 HOH 4 304 304 HOH WAT A . D 4 HOH 5 305 305 HOH WAT A . D 4 HOH 6 306 306 HOH WAT A . D 4 HOH 7 307 307 HOH WAT A . D 4 HOH 8 308 308 HOH WAT A . D 4 HOH 9 309 309 HOH WAT A . D 4 HOH 10 310 310 HOH WAT A . D 4 HOH 11 311 311 HOH WAT A . D 4 HOH 12 312 312 HOH WAT A . D 4 HOH 13 313 313 HOH WAT A . D 4 HOH 14 314 314 HOH WAT A . D 4 HOH 15 315 315 HOH WAT A . D 4 HOH 16 318 318 HOH WAT A . D 4 HOH 17 319 319 HOH WAT A . D 4 HOH 18 320 320 HOH WAT A . D 4 HOH 19 321 321 HOH WAT A . D 4 HOH 20 322 322 HOH WAT A . D 4 HOH 21 323 323 HOH WAT A . D 4 HOH 22 324 324 HOH WAT A . D 4 HOH 23 326 326 HOH WAT A . D 4 HOH 24 327 327 HOH WAT A . D 4 HOH 25 328 328 HOH WAT A . D 4 HOH 26 330 330 HOH WAT A . D 4 HOH 27 331 331 HOH WAT A . D 4 HOH 28 332 332 HOH WAT A . D 4 HOH 29 333 333 HOH WAT A . D 4 HOH 30 334 334 HOH WAT A . D 4 HOH 31 335 335 HOH WAT A . D 4 HOH 32 336 336 HOH WAT A . D 4 HOH 33 338 338 HOH WAT A . D 4 HOH 34 340 340 HOH WAT A . D 4 HOH 35 341 341 HOH WAT A . D 4 HOH 36 343 343 HOH WAT A . D 4 HOH 37 344 344 HOH WAT A . D 4 HOH 38 345 345 HOH WAT A . D 4 HOH 39 346 346 HOH WAT A . D 4 HOH 40 347 347 HOH WAT A . D 4 HOH 41 348 348 HOH WAT A . D 4 HOH 42 350 350 HOH WAT A . D 4 HOH 43 351 351 HOH WAT A . D 4 HOH 44 353 353 HOH WAT A . D 4 HOH 45 354 354 HOH WAT A . D 4 HOH 46 355 355 HOH WAT A . D 4 HOH 47 356 356 HOH WAT A . D 4 HOH 48 357 357 HOH WAT A . D 4 HOH 49 360 360 HOH WAT A . D 4 HOH 50 361 361 HOH WAT A . D 4 HOH 51 362 362 HOH WAT A . D 4 HOH 52 364 364 HOH WAT A . D 4 HOH 53 365 365 HOH WAT A . D 4 HOH 54 366 366 HOH WAT A . D 4 HOH 55 367 367 HOH WAT A . D 4 HOH 56 368 368 HOH WAT A . D 4 HOH 57 371 371 HOH WAT A . D 4 HOH 58 372 372 HOH WAT A . D 4 HOH 59 375 375 HOH WAT A . D 4 HOH 60 377 377 HOH WAT A . D 4 HOH 61 378 378 HOH WAT A . D 4 HOH 62 380 380 HOH WAT A . D 4 HOH 63 381 381 HOH WAT A . D 4 HOH 64 384 384 HOH WAT A . D 4 HOH 65 385 385 HOH WAT A . D 4 HOH 66 386 386 HOH WAT A . D 4 HOH 67 387 387 HOH WAT A . D 4 HOH 68 391 391 HOH WAT A . D 4 HOH 69 393 393 HOH WAT A . D 4 HOH 70 395 395 HOH WAT A . D 4 HOH 71 396 396 HOH WAT A . D 4 HOH 72 401 401 HOH WAT A . D 4 HOH 73 404 404 HOH WAT A . D 4 HOH 74 407 407 HOH WAT A . D 4 HOH 75 408 408 HOH WAT A . D 4 HOH 76 409 409 HOH WAT A . D 4 HOH 77 410 410 HOH WAT A . D 4 HOH 78 413 413 HOH WAT A . D 4 HOH 79 415 415 HOH WAT A . D 4 HOH 80 416 416 HOH WAT A . D 4 HOH 81 421 421 HOH WAT A . D 4 HOH 82 425 425 HOH WAT A . D 4 HOH 83 427 427 HOH WAT A . D 4 HOH 84 431 431 HOH WAT A . D 4 HOH 85 432 432 HOH WAT A . D 4 HOH 86 433 433 HOH WAT A . D 4 HOH 87 436 436 HOH WAT A . D 4 HOH 88 440 440 HOH WAT A . D 4 HOH 89 441 441 HOH WAT A . D 4 HOH 90 442 442 HOH WAT A . D 4 HOH 91 444 444 HOH WAT A . D 4 HOH 92 445 445 HOH WAT A . D 4 HOH 93 446 446 HOH WAT A . D 4 HOH 94 447 447 HOH WAT A . D 4 HOH 95 451 451 HOH WAT A . D 4 HOH 96 456 456 HOH WAT A . D 4 HOH 97 463 463 HOH WAT A . D 4 HOH 98 471 471 HOH WAT A . D 4 HOH 99 478 478 HOH WAT A . D 4 HOH 100 479 479 HOH WAT A . D 4 HOH 101 480 480 HOH WAT A . D 4 HOH 102 483 483 HOH WAT A . D 4 HOH 103 489 489 HOH WAT A . D 4 HOH 104 490 490 HOH WAT A . D 4 HOH 105 493 493 HOH WAT A . D 4 HOH 106 498 498 HOH WAT A . D 4 HOH 107 506 506 HOH WAT A . D 4 HOH 108 509 509 HOH WAT A . D 4 HOH 109 510 510 HOH WAT A . D 4 HOH 110 511 511 HOH WAT A . D 4 HOH 111 513 513 HOH WAT A . D 4 HOH 112 514 514 HOH WAT A . D 4 HOH 113 516 516 HOH WAT A . D 4 HOH 114 520 520 HOH WAT A . D 4 HOH 115 521 521 HOH WAT A . D 4 HOH 116 522 522 HOH WAT A . D 4 HOH 117 524 524 HOH WAT A . D 4 HOH 118 525 525 HOH WAT A . D 4 HOH 119 528 528 HOH WAT A . D 4 HOH 120 529 529 HOH WAT A . D 4 HOH 121 531 531 HOH WAT A . D 4 HOH 122 533 533 HOH WAT A . D 4 HOH 123 535 535 HOH WAT A . D 4 HOH 124 536 536 HOH WAT A . D 4 HOH 125 602 602 HOH WAT A . D 4 HOH 126 605 605 HOH WAT A . D 4 HOH 127 606 606 HOH WAT A . D 4 HOH 128 607 607 HOH WAT A . D 4 HOH 129 616 616 HOH WAT A . D 4 HOH 130 618 618 HOH WAT A . D 4 HOH 131 624 624 HOH WAT A . D 4 HOH 132 625 625 HOH WAT A . D 4 HOH 133 626 626 HOH WAT A . D 4 HOH 134 627 627 HOH WAT A . D 4 HOH 135 630 630 HOH WAT A . D 4 HOH 136 638 638 HOH WAT A . D 4 HOH 137 639 639 HOH WAT A . D 4 HOH 138 641 641 HOH WAT A . D 4 HOH 139 644 644 HOH WAT A . D 4 HOH 140 647 647 HOH WAT A . D 4 HOH 141 657 657 HOH WAT A . D 4 HOH 142 658 658 HOH WAT A . D 4 HOH 143 659 659 HOH WAT A . D 4 HOH 144 660 660 HOH WAT A . D 4 HOH 145 663 663 HOH WAT A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id THR _pdbx_struct_mod_residue.label_seq_id 42 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id THR _pdbx_struct_mod_residue.auth_seq_id 42 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 117 ? A HIS 117 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 NE2 ? A HIS 121 ? A HIS 121 ? 1_555 102.2 ? 2 NE2 ? A HIS 117 ? A HIS 117 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 OD1 ? A ASP 130 ? A ASP 130 ? 1_555 100.9 ? 3 NE2 ? A HIS 121 ? A HIS 121 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 OD1 ? A ASP 130 ? A ASP 130 ? 1_555 90.2 ? 4 NE2 ? A HIS 117 ? A HIS 117 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 OD2 ? A ASP 130 ? A ASP 130 ? 1_555 154.3 ? 5 NE2 ? A HIS 121 ? A HIS 121 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 OD2 ? A ASP 130 ? A ASP 130 ? 1_555 81.8 ? 6 OD1 ? A ASP 130 ? A ASP 130 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 OD2 ? A ASP 130 ? A ASP 130 ? 1_555 53.5 ? 7 NE2 ? A HIS 117 ? A HIS 117 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 346 ? 1_555 103.3 ? 8 NE2 ? A HIS 121 ? A HIS 121 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 346 ? 1_555 108.7 ? 9 OD1 ? A ASP 130 ? A ASP 130 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 346 ? 1_555 145.0 ? 10 OD2 ? A ASP 130 ? A ASP 130 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 346 ? 1_555 99.2 ? 11 NE2 ? A HIS 117 ? A HIS 117 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 93.1 ? 12 NE2 ? A HIS 121 ? A HIS 121 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 164.7 ? 13 OD1 ? A ASP 130 ? A ASP 130 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 86.4 ? 14 OD2 ? A ASP 130 ? A ASP 130 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 84.2 ? 15 O ? D HOH . ? A HOH 346 ? 1_555 ZN ? C ZN . ? A ZN 200 ? 1_555 O ? D HOH . ? A HOH 513 ? 1_555 67.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-03-14 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp 3 5 'Structure model' entity 4 5 'Structure model' pdbx_chem_comp_identifier 5 5 'Structure model' pdbx_entity_nonpoly 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site 9 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_nonpoly.name' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.value' 18 5 'Structure model' '_struct_conn.pdbx_dist_value' 19 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 5 'Structure model' '_struct_conn.pdbx_role' 21 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PROCESS 'data collection' . ? 1 PROCESS 'data reduction' . ? 2 SHARP phasing . ? 3 CNS refinement . ? 4 PROCESS 'data scaling' '(RIGAKU)' ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 130 ? ? -116.46 79.17 2 1 GLN A 166 ? ? -137.32 -61.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 1 ? A THR 1 2 1 Y 1 A TYR 2 ? A TYR 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 A GLY 4 ? A GLY 4 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-D-mannopyranose MAN 3 'ZINC ION' ZN 4 water HOH #