HEADER HYDROLASE 07-FEB-01 1GIK TITLE POKEWEED ANTIVIRAL PROTEIN FROM SEEDS CAVEAT 1GIK NAG A 302 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIVIRAL PROTEIN S; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RIBOSOME-INACTIVATING PROTEIN; COMPND 5 EC: 3.2.2.22 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHYTOLACCA AMERICANA; SOURCE 3 ORGANISM_COMMON: AMERICAN POKEWEED; SOURCE 4 ORGANISM_TAXID: 3527 KEYWDS ALPHA+BETA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.H.ZENG,X.L.HE,H.M.LI,Z.HU,D.C.WANG REVDAT 7 30-OCT-24 1GIK 1 REMARK REVDAT 6 09-AUG-23 1GIK 1 HETSYN REVDAT 5 29-JUL-20 1GIK 1 CAVEAT COMPND REMARK HET REVDAT 5 2 1 HETNAM FORMUL LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 04-OCT-17 1GIK 1 REMARK REVDAT 3 13-JUL-11 1GIK 1 VERSN REVDAT 2 24-FEB-09 1GIK 1 VERSN REVDAT 1 30-SEP-03 1GIK 0 JRNL AUTH Z.H.ZENG,X.L.HE,H.M.LI,Z.HU,D.C.WANG JRNL TITL CRYSTAL STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN WITH JRNL TITL 2 WELL-DEFINED SUGARS FROM SEEDS AT 1.8 ANGSTROM RESOLUTION JRNL REF J.STRUCT.BIOL. V. 141 171 2003 JRNL REFN ISSN 1047-8477 JRNL PMID 12615543 JRNL DOI 10.1016/S1047-8477(02)00580-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.M.LI,Z.H.ZENG,Z.HU,D.C.WANG REMARK 1 TITL CRYSTALLIZATION AND PERLIMINARY CRYSTALLOGRAPHIC ANALYSES OF REMARK 1 TITL 2 POKEWEED ANTIVIRAL PROTEIN FROM SEEDS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 137 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444997010639 REMARK 1 REFERENCE 2 REMARK 1 AUTH Z.H.ZENG,L.JIN,H.M.LI,Z.HU,D.C.WANG REMARK 1 TITL CRYSTAL STRUCTURE OF A POKEWEED ANTIVIRAL PROTEIN FROM SEEDS REMARK 1 TITL 2 OF PHYTOLACCA AMERICANA AT 0.25 NM REMARK 1 REF SCI.CHINA, SER.C: LIFE SCI. V. 41 413 1998 REMARK 1 REFN ISSN 1006-9305 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.AGO,J.KATAOKA,H.TSUGE,N.HABUKA,E.INAGAKI,M.NOMA,M.MIYANO REMARK 1 TITL X-RAY STRUCTURE OF A POKEWEED ANTIVIRAL PROTEIN, CODED BY A REMARK 1 TITL 2 NEW GENOMIC CLONE, AT 0.23 NM RESOLUTION. A MODEL STRUCTURE REMARK 1 TITL 3 PROVIDES A SUITABLE ELECTROSTATIC FIELD FOR SUBSTRATE REMARK 1 TITL 4 BINDING REMARK 1 REF EUR.J.BIOCHEM. V. 225 369 1994 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 4 REMARK 1 AUTH A.F.MONZINGO,E.J.COLLINS,S.R.ERUST,J.D.IRVIN,J.D.ROBERTUS REMARK 1 TITL THE 2.5 A STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN REMARK 1 REF J.MOL.BIOL. V. 233 705 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1993.1547 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2754268.790 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 68.8 REMARK 3 NUMBER OF REFLECTIONS : 19619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1894 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 53.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2198 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 270 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2053 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 594 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.25000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.55 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.66 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.040 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GIK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-01. REMARK 100 THE DEPOSITION ID IS D_1000001555. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-94 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : FUJI REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CCP4, WEIS REMARK 200 DATA SCALING SOFTWARE : WEIS, CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19619 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 69.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1PAF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6000 SODIUM PHOSPHATE, PH 5.5, REMARK 280 EVAPORATION, TEMPERATURE 305K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.38000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.02500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.78500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.38000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.02500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.78500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.38000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.02500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.78500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.38000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 39.02500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 45.78500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 327 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 433 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 550 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 553 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 556 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 895 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 639 O HOH A 653 1.72 REMARK 500 O HOH A 660 O HOH A 743 1.76 REMARK 500 O HOH A 825 O HOH A 853 1.86 REMARK 500 O HOH A 844 O HOH A 867 1.91 REMARK 500 O HOH A 688 O HOH A 708 1.93 REMARK 500 O HOH A 563 O HOH A 630 2.00 REMARK 500 O HOH A 526 O HOH A 704 2.00 REMARK 500 O HOH A 589 O HOH A 605 2.02 REMARK 500 O HOH A 716 O HOH A 754 2.07 REMARK 500 O HOH A 461 O HOH A 539 2.08 REMARK 500 O HOH A 812 O HOH A 848 2.09 REMARK 500 O HOH A 442 O HOH A 708 2.09 REMARK 500 O HOH A 832 O HOH A 851 2.09 REMARK 500 O HOH A 548 O HOH A 554 2.10 REMARK 500 O HOH A 823 O HOH A 847 2.10 REMARK 500 O HOH A 548 O HOH A 561 2.15 REMARK 500 O HOH A 479 O HOH A 513 2.15 REMARK 500 O HOH A 418 O HOH A 661 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 446 O HOH A 446 2665 1.64 REMARK 500 O HOH A 488 O HOH A 555 4565 1.94 REMARK 500 O HOH A 367 O HOH A 422 8455 2.13 REMARK 500 NZ LYS A 93 NZ LYS A 93 2565 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 32 104.09 -178.22 REMARK 500 CYS A 34 99.85 -173.18 REMARK 500 THR A 43 -65.12 -18.51 REMARK 500 LEU A 59 -5.69 77.89 REMARK 500 LEU A 71 27.97 80.58 REMARK 500 PRO A 106 132.55 -34.70 REMARK 500 SER A 107 36.04 -75.51 REMARK 500 ASN A 117 55.74 -95.52 REMARK 500 TYR A 118 -178.02 175.04 REMARK 500 ILE A 151 -64.53 -109.93 REMARK 500 VAL A 173 -59.56 -128.32 REMARK 500 ASN A 189 63.21 -100.51 REMARK 500 HIS A 215 -82.05 -48.95 REMARK 500 ASN A 216 33.12 -80.92 REMARK 500 ASN A 219 -10.53 75.29 REMARK 500 LEU A 222 150.12 -42.70 REMARK 500 PRO A 225 149.02 -36.91 REMARK 500 LEU A 228 -157.45 -132.01 REMARK 500 GLN A 259 99.44 -53.88 REMARK 500 REMARK 500 REMARK: NULL DBREF 1GIK A 1 261 UNP P23339 RIPS_PHYAM 1 261 SEQRES 1 A 261 ILE ASN THR ILE THR PHE ASP ALA GLY ASN ALA THR ILE SEQRES 2 A 261 ASN LYS TYR ALA THR PHE MET GLU SER LEU ARG ASN GLU SEQRES 3 A 261 ALA LYS ASP PRO SER LEU LYS CYS TYR GLY ILE PRO MET SEQRES 4 A 261 LEU PRO ASN THR ASN SER THR ILE LYS TYR LEU LEU VAL SEQRES 5 A 261 LYS LEU GLN GLY ALA SER LEU LYS THR ILE THR LEU MET SEQRES 6 A 261 LEU ARG ARG ASN ASN LEU TYR VAL MET GLY TYR SER ASP SEQRES 7 A 261 PRO TYR ASP ASN LYS CYS ARG TYR HIS ILE PHE ASN ASP SEQRES 8 A 261 ILE LYS GLY THR GLU TYR SER ASP VAL GLU ASN THR LEU SEQRES 9 A 261 CYS PRO SER SER ASN PRO ARG VAL ALA LYS PRO ILE ASN SEQRES 10 A 261 TYR ASN GLY LEU TYR PRO THR LEU GLU LYS LYS ALA GLY SEQRES 11 A 261 VAL THR SER ARG ASN GLU VAL GLN LEU GLY ILE GLN ILE SEQRES 12 A 261 LEU SER SER ASP ILE GLY LYS ILE SER GLY GLN GLY SER SEQRES 13 A 261 PHE THR GLU LYS ILE GLU ALA LYS PHE LEU LEU VAL ALA SEQRES 14 A 261 ILE GLN MET VAL SER GLU ALA ALA ARG PHE LYS TYR ILE SEQRES 15 A 261 GLU ASN GLN VAL LYS THR ASN PHE ASN ARG ASP PHE SER SEQRES 16 A 261 PRO ASN ASP LYS VAL LEU ASP LEU GLU GLU ASN TRP GLY SEQRES 17 A 261 LYS ILE SER THR ALA ILE HIS ASN SER LYS ASN GLY ALA SEQRES 18 A 261 LEU PRO LYS PRO LEU GLU LEU LYS ASN ALA ASP GLY THR SEQRES 19 A 261 LYS TRP ILE VAL LEU ARG VAL ASP GLU ILE LYS PRO ASP SEQRES 20 A 261 VAL GLY LEU LEU ASN TYR VAL ASN GLY THR CYS GLN ALA SEQRES 21 A 261 THR MODRES 1GIK ASN A 10 ASN GLYCOSYLATION SITE MODRES 1GIK ASN A 44 ASN GLYCOSYLATION SITE MODRES 1GIK ASN A 255 ASN GLYCOSYLATION SITE HET NAG A 301 14 HET NAG A 302 14 HET NAG A 303 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 5 HOH *594(H2 O) HELIX 1 1 THR A 12 LYS A 28 1 17 HELIX 2 2 GLY A 94 CYS A 105 1 12 HELIX 3 3 LEU A 121 GLY A 130 1 10 HELIX 4 4 SER A 133 VAL A 137 5 5 HELIX 5 5 GLY A 140 SER A 152 1 13 HELIX 6 6 THR A 158 VAL A 173 1 16 HELIX 7 7 VAL A 173 PHE A 179 1 7 HELIX 8 8 PHE A 179 ASN A 189 1 11 HELIX 9 9 ASN A 197 ASN A 206 1 10 HELIX 10 10 ASN A 206 ASN A 216 1 11 HELIX 11 11 SER A 217 ASN A 219 5 3 HELIX 12 12 VAL A 241 LYS A 245 1 5 SHEET 1 A 6 THR A 3 ASP A 7 0 SHEET 2 A 6 TYR A 49 GLN A 55 1 O LEU A 51 N ILE A 4 SHEET 3 A 6 THR A 61 ARG A 67 -1 O ILE A 62 N LEU A 54 SHEET 4 A 6 VAL A 73 TYR A 80 -1 N MET A 74 O MET A 65 SHEET 5 A 6 LYS A 83 ILE A 88 -1 O LYS A 83 N TYR A 80 SHEET 6 A 6 ARG A 111 ALA A 113 1 N VAL A 112 O CYS A 84 SHEET 1 B 2 ALA A 221 LYS A 229 0 SHEET 2 B 2 LYS A 235 ARG A 240 -1 O TRP A 236 N LEU A 228 SSBOND 1 CYS A 34 CYS A 258 1555 1555 2.04 SSBOND 2 CYS A 84 CYS A 105 1555 1555 1.99 LINK ND2 ASN A 10 C1 NAG A 301 1555 1555 1.45 LINK ND2 ASN A 44 C1 NAG A 302 1555 1555 1.46 LINK ND2 ASN A 255 C1 NAG A 303 1555 1555 1.47 CRYST1 84.760 78.050 91.570 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011798 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010921 0.00000