HEADER TOXIN 12-MAR-01 1GIQ TITLE CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF IOTA-TOXIN FROM TITLE 2 CLOSTRIDIUM PERFRINGENS WITH NADH COMPND MOL_ID: 1; COMPND 2 MOLECULE: IOTA TOXIN COMPONENT IA; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502 KEYWDS ENZYMATIC COMPONENT, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR H.TSUGE,M.NAGAHAMA,H.NISHIMURA,J.HISATSUNE,Y.SAKAGUCHI,Y.ITOGAWA, AUTHOR 2 N.KATUNUMA,J.SAKURAI REVDAT 5 25-OCT-23 1GIQ 1 REMARK REVDAT 4 04-OCT-17 1GIQ 1 REMARK REVDAT 3 06-NOV-13 1GIQ 1 HET HETATM HETNAM VERSN REVDAT 2 24-FEB-09 1GIQ 1 VERSN REVDAT 1 14-JAN-03 1GIQ 0 JRNL AUTH H.TSUGE,M.NAGAHAMA,H.NISHIMURA,J.HISATSUNE,Y.SAKAGUCHI, JRNL AUTH 2 Y.ITOGAWA,N.KATUNUMA,J.SAKURAI JRNL TITL CRYSTAL STRUCTURE AND SITE-DIRECTED MUTAGENESIS OF ENZYMATIC JRNL TITL 2 COMPONENTS FROM CLOSTRIDIUM PERFRINGENS IOTA-TOXIN JRNL REF J.MOL.BIOL. V. 325 471 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12498797 JRNL DOI 10.1016/S0022-2836(02)01247-0 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 454280.270 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 83233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 8178 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11160 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1051 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6694 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 2.08000 REMARK 3 B33 (A**2) : -2.28000 REMARK 3 B12 (A**2) : 0.38000 REMARK 3 B13 (A**2) : -0.11000 REMARK 3 B23 (A**2) : 2.12000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.810 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.580 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.540 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.400 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.620 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 56.98 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : VIP2NAD.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : VIP2NAD.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GIQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-MAR-01. REMARK 100 THE DEPOSITION ID IS D_1000001559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 283.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-18B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, DPS REMARK 200 DATA SCALING SOFTWARE : DPS, MOSFLM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87691 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 1.970 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.25600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1GIR:THE ENZYMATIC COMPONENT IOTA-TOXIN WITH NADPH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, NADH, TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PHE A 2 REMARK 465 ALA B 1001 REMARK 465 PHE B 1002 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 288 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 4 43.84 -89.61 REMARK 500 LEU A 10 -129.94 55.56 REMARK 500 ASP A 45 73.73 -158.27 REMARK 500 ASN A 103 45.98 -87.93 REMARK 500 GLN A 127 -95.06 -81.33 REMARK 500 ASN A 163 46.43 -98.32 REMARK 500 ASN A 171 -95.96 -94.25 REMARK 500 SER A 172 -81.25 -82.65 REMARK 500 ASP A 182 50.83 -155.16 REMARK 500 LYS A 214 -127.94 50.26 REMARK 500 ASN A 265 -18.18 167.08 REMARK 500 ASN A 266 62.45 -174.69 REMARK 500 ALA A 348 -28.77 88.26 REMARK 500 SER A 370 2.37 -68.76 REMARK 500 PRO A 373 109.86 -48.91 REMARK 500 TYR A 375 72.37 -164.27 REMARK 500 GLU B1004 42.07 -173.25 REMARK 500 LEU B1010 -126.90 53.07 REMARK 500 ASP B1045 70.95 -154.91 REMARK 500 ASN B1103 36.03 -80.52 REMARK 500 ILE B1126 63.10 -119.65 REMARK 500 GLN B1127 -65.60 -106.96 REMARK 500 ASP B1128 58.56 -114.45 REMARK 500 ASN B1163 37.93 -97.72 REMARK 500 ASN B1171 -69.95 -92.56 REMARK 500 SER B1172 -94.49 -120.47 REMARK 500 ASP B1182 57.58 -152.91 REMARK 500 LYS B1214 -125.04 48.72 REMARK 500 SER B1260 34.69 -99.79 REMARK 500 ASN B1261 53.87 37.12 REMARK 500 PRO B1263 -3.35 -57.93 REMARK 500 LEU B1264 37.43 -141.98 REMARK 500 ASN B1265 -21.53 -169.29 REMARK 500 ASN B1266 56.65 -167.65 REMARK 500 ALA B1348 -38.27 99.55 REMARK 500 ASP B1363 8.01 80.13 REMARK 500 SER B1370 1.85 -69.53 REMARK 500 TYR B1375 65.35 175.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI B 1500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GIR RELATED DB: PDB REMARK 900 1GIR CONTAINS THE SAME PROTEIN WITH NADPH DBREF 1GIQ A 1 413 UNP Q46220 Q46220_CLOPE 42 454 DBREF 1GIQ B 1001 1413 UNP Q46220 Q46220_CLOPE 42 454 SEQRES 1 A 413 ALA PHE ILE GLU ARG PRO GLU ASP PHE LEU LYS ASP LYS SEQRES 2 A 413 GLU ASN ALA ILE GLN TRP GLU LYS LYS GLU ALA GLU ARG SEQRES 3 A 413 VAL GLU LYS ASN LEU ASP THR LEU GLU LYS GLU ALA LEU SEQRES 4 A 413 GLU LEU TYR LYS LYS ASP SER GLU GLN ILE SER ASN TYR SEQRES 5 A 413 SER GLN THR ARG GLN TYR PHE TYR ASP TYR GLN ILE GLU SEQRES 6 A 413 SER ASN PRO ARG GLU LYS GLU TYR LYS ASN LEU ARG ASN SEQRES 7 A 413 ALA ILE SER LYS ASN LYS ILE ASP LYS PRO ILE ASN VAL SEQRES 8 A 413 TYR TYR PHE GLU SER PRO GLU LYS PHE ALA PHE ASN LYS SEQRES 9 A 413 GLU ILE ARG THR GLU ASN GLN ASN GLU ILE SER LEU GLU SEQRES 10 A 413 LYS PHE ASN GLU LEU LYS GLU THR ILE GLN ASP LYS LEU SEQRES 11 A 413 PHE LYS GLN ASP GLY PHE LYS ASP VAL SER LEU TYR GLU SEQRES 12 A 413 PRO GLY ASN GLY ASP GLU LYS PRO THR PRO LEU LEU ILE SEQRES 13 A 413 HIS LEU LYS LEU PRO LYS ASN THR GLY MET LEU PRO TYR SEQRES 14 A 413 ILE ASN SER ASN ASP VAL LYS THR LEU ILE GLU GLN ASP SEQRES 15 A 413 TYR SER ILE LYS ILE ASP LYS ILE VAL ARG ILE VAL ILE SEQRES 16 A 413 GLU GLY LYS GLN TYR ILE LYS ALA GLU ALA SER ILE VAL SEQRES 17 A 413 ASN SER LEU ASP PHE LYS ASP ASP VAL SER LYS GLY ASP SEQRES 18 A 413 LEU TRP GLY LYS GLU ASN TYR SER ASP TRP SER ASN LYS SEQRES 19 A 413 LEU THR PRO ASN GLU LEU ALA ASP VAL ASN ASP TYR MET SEQRES 20 A 413 ARG GLY GLY TYR THR ALA ILE ASN ASN TYR LEU ILE SER SEQRES 21 A 413 ASN GLY PRO LEU ASN ASN PRO ASN PRO GLU LEU ASP SER SEQRES 22 A 413 LYS VAL ASN ASN ILE GLU ASN ALA LEU LYS LEU THR PRO SEQRES 23 A 413 ILE PRO SER ASN LEU ILE VAL TYR ARG ARG SER GLY PRO SEQRES 24 A 413 GLN GLU PHE GLY LEU THR LEU THR SER PRO GLU TYR ASP SEQRES 25 A 413 PHE ASN LYS ILE GLU ASN ILE ASP ALA PHE LYS GLU LYS SEQRES 26 A 413 TRP GLU GLY LYS VAL ILE THR TYR PRO ASN PHE ILE SER SEQRES 27 A 413 THR SER ILE GLY SER VAL ASN MET SER ALA PHE ALA LYS SEQRES 28 A 413 ARG LYS ILE ILE LEU ARG ILE ASN ILE PRO LYS ASP SER SEQRES 29 A 413 PRO GLY ALA TYR LEU SER ALA ILE PRO GLY TYR ALA GLY SEQRES 30 A 413 GLU TYR GLU VAL LEU LEU ASN HIS GLY SER LYS PHE LYS SEQRES 31 A 413 ILE ASN LYS VAL ASP SER TYR LYS ASP GLY THR VAL THR SEQRES 32 A 413 LYS LEU ILE LEU ASP ALA THR LEU ILE ASN SEQRES 1 B 413 ALA PHE ILE GLU ARG PRO GLU ASP PHE LEU LYS ASP LYS SEQRES 2 B 413 GLU ASN ALA ILE GLN TRP GLU LYS LYS GLU ALA GLU ARG SEQRES 3 B 413 VAL GLU LYS ASN LEU ASP THR LEU GLU LYS GLU ALA LEU SEQRES 4 B 413 GLU LEU TYR LYS LYS ASP SER GLU GLN ILE SER ASN TYR SEQRES 5 B 413 SER GLN THR ARG GLN TYR PHE TYR ASP TYR GLN ILE GLU SEQRES 6 B 413 SER ASN PRO ARG GLU LYS GLU TYR LYS ASN LEU ARG ASN SEQRES 7 B 413 ALA ILE SER LYS ASN LYS ILE ASP LYS PRO ILE ASN VAL SEQRES 8 B 413 TYR TYR PHE GLU SER PRO GLU LYS PHE ALA PHE ASN LYS SEQRES 9 B 413 GLU ILE ARG THR GLU ASN GLN ASN GLU ILE SER LEU GLU SEQRES 10 B 413 LYS PHE ASN GLU LEU LYS GLU THR ILE GLN ASP LYS LEU SEQRES 11 B 413 PHE LYS GLN ASP GLY PHE LYS ASP VAL SER LEU TYR GLU SEQRES 12 B 413 PRO GLY ASN GLY ASP GLU LYS PRO THR PRO LEU LEU ILE SEQRES 13 B 413 HIS LEU LYS LEU PRO LYS ASN THR GLY MET LEU PRO TYR SEQRES 14 B 413 ILE ASN SER ASN ASP VAL LYS THR LEU ILE GLU GLN ASP SEQRES 15 B 413 TYR SER ILE LYS ILE ASP LYS ILE VAL ARG ILE VAL ILE SEQRES 16 B 413 GLU GLY LYS GLN TYR ILE LYS ALA GLU ALA SER ILE VAL SEQRES 17 B 413 ASN SER LEU ASP PHE LYS ASP ASP VAL SER LYS GLY ASP SEQRES 18 B 413 LEU TRP GLY LYS GLU ASN TYR SER ASP TRP SER ASN LYS SEQRES 19 B 413 LEU THR PRO ASN GLU LEU ALA ASP VAL ASN ASP TYR MET SEQRES 20 B 413 ARG GLY GLY TYR THR ALA ILE ASN ASN TYR LEU ILE SER SEQRES 21 B 413 ASN GLY PRO LEU ASN ASN PRO ASN PRO GLU LEU ASP SER SEQRES 22 B 413 LYS VAL ASN ASN ILE GLU ASN ALA LEU LYS LEU THR PRO SEQRES 23 B 413 ILE PRO SER ASN LEU ILE VAL TYR ARG ARG SER GLY PRO SEQRES 24 B 413 GLN GLU PHE GLY LEU THR LEU THR SER PRO GLU TYR ASP SEQRES 25 B 413 PHE ASN LYS ILE GLU ASN ILE ASP ALA PHE LYS GLU LYS SEQRES 26 B 413 TRP GLU GLY LYS VAL ILE THR TYR PRO ASN PHE ILE SER SEQRES 27 B 413 THR SER ILE GLY SER VAL ASN MET SER ALA PHE ALA LYS SEQRES 28 B 413 ARG LYS ILE ILE LEU ARG ILE ASN ILE PRO LYS ASP SER SEQRES 29 B 413 PRO GLY ALA TYR LEU SER ALA ILE PRO GLY TYR ALA GLY SEQRES 30 B 413 GLU TYR GLU VAL LEU LEU ASN HIS GLY SER LYS PHE LYS SEQRES 31 B 413 ILE ASN LYS VAL ASP SER TYR LYS ASP GLY THR VAL THR SEQRES 32 B 413 LYS LEU ILE LEU ASP ALA THR LEU ILE ASN HET NAI A 500 44 HET NAI B1500 44 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETSYN NAI NADH FORMUL 3 NAI 2(C21 H29 N7 O14 P2) FORMUL 5 HOH *286(H2 O) HELIX 1 1 ASP A 12 LYS A 29 1 18 HELIX 2 2 ASP A 32 LYS A 43 1 12 HELIX 3 3 ASP A 45 ARG A 56 1 12 HELIX 4 4 GLN A 57 PHE A 59 5 3 HELIX 5 5 TYR A 60 ASN A 67 1 8 HELIX 6 6 ASN A 67 ASN A 83 1 17 HELIX 7 7 SER A 96 ALA A 101 5 6 HELIX 8 8 SER A 115 ILE A 126 1 12 HELIX 9 9 ASP A 216 SER A 229 1 14 HELIX 10 10 TRP A 231 LEU A 235 5 5 HELIX 11 11 THR A 236 ARG A 248 1 13 HELIX 12 12 GLY A 250 SER A 260 1 11 HELIX 13 13 ASN A 261 ASN A 265 5 5 HELIX 14 14 ASN A 268 LYS A 283 1 16 HELIX 15 15 GLY A 298 GLY A 303 5 6 HELIX 16 16 SER A 308 ASP A 312 5 5 HELIX 17 17 LYS A 315 GLU A 327 1 13 HELIX 18 18 SER A 370 ILE A 372 5 3 HELIX 19 19 ASP B 1012 LYS B 1029 1 18 HELIX 20 20 ASP B 1032 LYS B 1043 1 12 HELIX 21 21 ASP B 1045 ARG B 1056 1 12 HELIX 22 22 GLN B 1057 PHE B 1059 5 3 HELIX 23 23 TYR B 1060 ASN B 1067 1 8 HELIX 24 24 ASN B 1067 ASN B 1083 1 17 HELIX 25 25 SER B 1096 ALA B 1101 5 6 HELIX 26 26 SER B 1115 ILE B 1126 1 12 HELIX 27 27 ASP B 1216 SER B 1229 1 14 HELIX 28 28 TRP B 1231 LEU B 1235 5 5 HELIX 29 29 THR B 1236 ARG B 1248 1 13 HELIX 30 30 GLY B 1250 SER B 1260 1 11 HELIX 31 31 ASN B 1261 ASN B 1265 5 5 HELIX 32 32 ASN B 1268 LYS B 1283 1 16 HELIX 33 33 GLY B 1298 GLY B 1303 5 6 HELIX 34 34 SER B 1308 ASP B 1312 5 5 HELIX 35 35 LYS B 1315 GLU B 1327 1 13 HELIX 36 36 SER B 1370 ILE B 1372 5 3 SHEET 1 A 5 ILE A 89 GLU A 95 0 SHEET 2 A 5 LEU A 154 LEU A 160 -1 O LEU A 154 N GLU A 95 SHEET 3 A 5 LYS A 198 VAL A 208 1 O ILE A 201 N LEU A 155 SHEET 4 A 5 VAL A 175 ILE A 195 -1 O SER A 184 N VAL A 208 SHEET 5 A 5 LEU A 130 VAL A 139 -1 N PHE A 131 O ILE A 185 SHEET 1 B 5 ILE A 89 GLU A 95 0 SHEET 2 B 5 LEU A 154 LEU A 160 -1 O LEU A 154 N GLU A 95 SHEET 3 B 5 LYS A 198 VAL A 208 1 O ILE A 201 N LEU A 155 SHEET 4 B 5 VAL A 175 ILE A 195 -1 O SER A 184 N VAL A 208 SHEET 5 B 5 LEU A 167 ILE A 170 -1 N LEU A 167 O LEU A 178 SHEET 1 C 5 LEU A 291 SER A 297 0 SHEET 2 C 5 ILE A 354 ILE A 360 -1 O ILE A 354 N SER A 297 SHEET 3 C 5 VAL A 402 LEU A 411 1 O LEU A 405 N ILE A 355 SHEET 4 C 5 SER A 387 ASP A 399 -1 N LYS A 390 O THR A 410 SHEET 5 C 5 VAL A 330 TYR A 333 -1 O ILE A 331 N PHE A 389 SHEET 1 D 3 ILE A 337 SER A 340 0 SHEET 2 D 3 GLU A 380 LEU A 383 -1 N VAL A 381 O THR A 339 SHEET 3 D 3 ALA A 367 TYR A 368 -1 O ALA A 367 N LEU A 382 SHEET 1 E 5 ILE B1089 PHE B1094 0 SHEET 2 E 5 LEU B1154 LEU B1160 -1 N ILE B1156 O TYR B1093 SHEET 3 E 5 LYS B1198 VAL B1208 1 O ILE B1201 N LEU B1155 SHEET 4 E 5 VAL B1175 ILE B1195 -1 O SER B1184 N VAL B1208 SHEET 5 E 5 LEU B1130 VAL B1139 -1 O PHE B1131 N ILE B1185 SHEET 1 F 5 ILE B1089 PHE B1094 0 SHEET 2 F 5 LEU B1154 LEU B1160 -1 N ILE B1156 O TYR B1093 SHEET 3 F 5 LYS B1198 VAL B1208 1 O ILE B1201 N LEU B1155 SHEET 4 F 5 VAL B1175 ILE B1195 -1 O SER B1184 N VAL B1208 SHEET 5 F 5 LEU B1167 ILE B1170 -1 N LEU B1167 O LEU B1178 SHEET 1 G 5 LEU B1291 SER B1297 0 SHEET 2 G 5 ILE B1354 ILE B1360 -1 O ILE B1354 N SER B1297 SHEET 3 G 5 VAL B1402 LEU B1411 1 O LEU B1405 N ILE B1355 SHEET 4 G 5 SER B1387 ASP B1399 -1 N LYS B1390 O THR B1410 SHEET 5 G 5 VAL B1330 TYR B1333 -1 O ILE B1331 N PHE B1389 SHEET 1 H 3 ILE B1337 SER B1340 0 SHEET 2 H 3 GLU B1380 LEU B1383 -1 O VAL B1381 N THR B1339 SHEET 3 H 3 ALA B1367 TYR B1368 -1 O ALA B1367 N LEU B1382 SITE 1 AC1 16 ILE A 259 ARG A 295 ARG A 296 GLN A 300 SITE 2 AC1 16 GLU A 301 ASN A 335 SER A 338 PHE A 349 SITE 3 AC1 16 ARG A 352 GLU A 380 HOH A4135 HOH A4215 SITE 4 AC1 16 HOH A4246 HOH A4282 ASP B1012 ASN B1015 SITE 1 AC2 15 ASP A 12 ASN A 15 ILE B1259 ARG B1295 SITE 2 AC2 15 ARG B1296 GLN B1300 GLU B1301 ASN B1335 SITE 3 AC2 15 SER B1338 THR B1339 PHE B1349 ARG B1352 SITE 4 AC2 15 GLU B1380 HOH B4074 HOH B4092 CRYST1 48.200 54.440 103.380 99.20 93.10 106.90 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020747 0.006303 0.002322 0.00000 SCALE2 0.000000 0.019198 0.003590 0.00000 SCALE3 0.000000 0.000000 0.009855 0.00000