data_1GMB # _entry.id 1GMB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GMB PDBE EBI-8555 WWPDB D_1290008555 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1GM4 unspecified 'OXIDISED STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 AT PH 7.6' PDB 3CYR unspecified 'CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774P' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GMB _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2001-09-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bento, I.' 1 'Louro, R.' 2 'Matias, P.M.' 3 'Catarino, T.' 4 'Baptista, A.M.' 5 'Soares, C.M.' 6 'Carrondo, M.A.' 7 'Turner, D.L.' 8 'Xavier, A.V.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Conformational Component in the Coupled Transfer of Multiple Electrons and Protons in a Monomeric Tetraheme Cytochrome' J.Biol.Chem. 276 44044 ? 2001 JBCHA3 US 0021-9258 0071 ? 11551953 10.1074/JBC.M107136200 1 ;Refinement of the Three-Dimensional Structures of Cytochrome C3 from Desulfovibrio Vulgaris Hildenborough at 1.67 Angstroms Resolution and from Desulfovibrio Desulfuricans Atcc 27774 at 1.6 Angstrom S Resolution ; Inorg.Chim.Acta 273 213 ? 1998 ICHAA3 SZ 0020-1693 0155 ? ? ? 2 ;Structure of the Tetraheme Cytochrome from Desulfovibrio Desulfuricans Atcc 27774: X-Ray Diffraction and Electron Paramagnetic Resonance Studies ; Biochemistry 34 12830 ? 1995 BICHAW US 0006-2960 0033 ? 7548038 10.1021/BI00039A044 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Louro, R.' 1 ? primary 'Bento, I.' 2 ? primary 'Matias, P.M.' 3 ? primary 'Catarino, T.' 4 ? primary 'Baptista, A.M.' 5 ? primary 'Soares, C.M.' 6 ? primary 'Carrondo, M.A.' 7 ? primary 'Turner, D.L.' 8 ? primary 'Xavier, A.V.' 9 ? 1 'Simoes, P.' 10 ? 1 'Matias, P.M.' 11 ? 1 'Morais, J.' 12 ? 1 'Wilson, K.' 13 ? 1 'Dauter, Z.' 14 ? 1 'Carrondo, M.A.' 15 ? 2 'Morais, J.' 16 ? 2 'Palma, P.N.' 17 ? 2 'Frazao, C.' 18 ? 2 'Caldeira, J.' 19 ? 2 'Legall, J.' 20 ? 2 'Moura, I.' 21 ? 2 'Moura, J.J.' 22 ? 2 'Carrondo, M.A.' 23 ? # _cell.entry_id 1GMB _cell.length_a 61.141 _cell.length_b 61.141 _cell.length_c 107.463 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GMB _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'CYTOCHROME C3' 11618.471 1 ? ? ? ? 2 non-polymer syn 'HEME C' 618.503 4 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 97 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APAVPDKPVEVKGSQKTVMFPHAPHEKVECVTCHHLVDGKESYAKCGSSGCHDDLTAKKGEKSLYYVVHARGELKHTSCL ACHSKVVAEKPELKKDLTGCAKSKCHP ; _entity_poly.pdbx_seq_one_letter_code_can ;APAVPDKPVEVKGSQKTVMFPHAPHEKVECVTCHHLVDGKESYAKCGSSGCHDDLTAKKGEKSLYYVVHARGELKHTSCL ACHSKVVAEKPELKKDLTGCAKSKCHP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ALA n 1 4 VAL n 1 5 PRO n 1 6 ASP n 1 7 LYS n 1 8 PRO n 1 9 VAL n 1 10 GLU n 1 11 VAL n 1 12 LYS n 1 13 GLY n 1 14 SER n 1 15 GLN n 1 16 LYS n 1 17 THR n 1 18 VAL n 1 19 MET n 1 20 PHE n 1 21 PRO n 1 22 HIS n 1 23 ALA n 1 24 PRO n 1 25 HIS n 1 26 GLU n 1 27 LYS n 1 28 VAL n 1 29 GLU n 1 30 CYS n 1 31 VAL n 1 32 THR n 1 33 CYS n 1 34 HIS n 1 35 HIS n 1 36 LEU n 1 37 VAL n 1 38 ASP n 1 39 GLY n 1 40 LYS n 1 41 GLU n 1 42 SER n 1 43 TYR n 1 44 ALA n 1 45 LYS n 1 46 CYS n 1 47 GLY n 1 48 SER n 1 49 SER n 1 50 GLY n 1 51 CYS n 1 52 HIS n 1 53 ASP n 1 54 ASP n 1 55 LEU n 1 56 THR n 1 57 ALA n 1 58 LYS n 1 59 LYS n 1 60 GLY n 1 61 GLU n 1 62 LYS n 1 63 SER n 1 64 LEU n 1 65 TYR n 1 66 TYR n 1 67 VAL n 1 68 VAL n 1 69 HIS n 1 70 ALA n 1 71 ARG n 1 72 GLY n 1 73 GLU n 1 74 LEU n 1 75 LYS n 1 76 HIS n 1 77 THR n 1 78 SER n 1 79 CYS n 1 80 LEU n 1 81 ALA n 1 82 CYS n 1 83 HIS n 1 84 SER n 1 85 LYS n 1 86 VAL n 1 87 VAL n 1 88 ALA n 1 89 GLU n 1 90 LYS n 1 91 PRO n 1 92 GLU n 1 93 LEU n 1 94 LYS n 1 95 LYS n 1 96 ASP n 1 97 LEU n 1 98 THR n 1 99 GLY n 1 100 CYS n 1 101 ALA n 1 102 LYS n 1 103 SER n 1 104 LYS n 1 105 CYS n 1 106 HIS n 1 107 PRO n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'DESULFOVIBRIO DESULFURICANS' _entity_src_nat.pdbx_ncbi_taxonomy_id 876 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc 27774 _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9L915 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9L915 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1GMB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9L915 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 128 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 107 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1GMB _struct_ref_seq_dif.mon_id ARG _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 71 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9L915 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 92 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 71 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1GMB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_percent_sol 50.71 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.60 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7.60' # _diffrn.id 1 _diffrn.ambient_temp 110.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR571' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1GMB _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 24.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 8507 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.04800 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.000 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.18600 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1GMB _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8507 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.0 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.205 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3CYR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 808 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 182 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 1087 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 24.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.69 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1GMB _struct.title 'Reduced structure of CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 at pH 7.6' _struct.pdbx_descriptor 'CYTOCHROME C3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GMB _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, CYTOCHROME' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 22 ? GLU A 26 ? HIS A 22 GLU A 26 5 ? 5 HELX_P HELX_P2 2 GLU A 29 ? HIS A 34 ? GLU A 29 HIS A 34 1 ? 6 HELX_P HELX_P3 3 SER A 63 ? ALA A 70 ? SER A 63 ALA A 70 1 ? 8 HELX_P HELX_P4 4 SER A 78 ? LYS A 90 ? SER A 78 LYS A 90 1 ? 13 HELX_P HELX_P5 5 LEU A 93 ? GLY A 99 ? LEU A 93 GLY A 99 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 22 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 22 A HEC 201 1_555 ? ? ? ? ? ? ? 1.988 ? metalc2 metalc ? ? A HIS 25 NE2 ? ? ? 1_555 D HEC . FE ? ? A HIS 25 A HEC 203 1_555 ? ? ? ? ? ? ? 1.957 ? covale1 covale none ? A CYS 30 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 30 A HEC 201 1_555 ? ? ? ? ? ? ? 1.823 ? covale2 covale none ? A CYS 33 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 33 A HEC 201 1_555 ? ? ? ? ? ? ? 1.827 ? metalc3 metalc ? ? A HIS 34 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 34 A HEC 201 1_555 ? ? ? ? ? ? ? 1.987 ? metalc4 metalc ? ? A HIS 35 NE2 ? ? ? 1_555 C HEC . FE ? ? A HIS 35 A HEC 202 1_555 ? ? ? ? ? ? ? 1.955 ? covale3 covale none ? A CYS 46 SG ? ? ? 1_555 C HEC . CAB ? ? A CYS 46 A HEC 202 1_555 ? ? ? ? ? ? ? 1.830 ? covale4 covale none ? A CYS 51 SG ? ? ? 1_555 C HEC . CAC ? ? A CYS 51 A HEC 202 1_555 ? ? ? ? ? ? ? 1.818 ? metalc5 metalc ? ? A HIS 52 NE2 ? ? ? 1_555 C HEC . FE ? ? A HIS 52 A HEC 202 1_555 ? ? ? ? ? ? ? 1.953 ? metalc6 metalc ? ? A HIS 69 NE2 ? ? ? 1_555 E HEC . FE ? ? A HIS 69 A HEC 204 1_555 ? ? ? ? ? ? ? 1.949 ? covale5 covale none ? A CYS 79 SG ? ? ? 1_555 D HEC . CAB ? ? A CYS 79 A HEC 203 1_555 ? ? ? ? ? ? ? 1.811 ? covale6 covale none ? A CYS 82 SG ? ? ? 1_555 D HEC . CAC ? ? A CYS 82 A HEC 203 1_555 ? ? ? ? ? ? ? 1.823 ? covale7 covale none ? A CYS 100 SG ? ? ? 1_555 E HEC . CAB ? ? A CYS 100 A HEC 204 1_555 ? ? ? ? ? ? ? 1.841 ? covale8 covale none ? A CYS 105 SG ? ? ? 1_555 E HEC . CAC ? ? A CYS 105 A HEC 204 1_555 ? ? ? ? ? ? ? 1.804 ? metalc7 metalc ? ? D HEC . FE ? ? ? 1_555 A HIS 83 NE2 ? ? A HEC 203 A HIS 83 1_555 ? ? ? ? ? ? ? 2.051 ? metalc8 metalc ? ? E HEC . FE ? ? ? 1_555 A HIS 106 NE2 ? ? A HEC 204 A HIS 106 1_555 ? ? ? ? ? ? ? 2.067 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 9 ? LYS A 12 ? VAL A 9 LYS A 12 AA 2 THR A 17 ? PHE A 20 ? THR A 17 PHE A 20 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 11 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 11 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 18 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 18 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SO4 A 300' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 301' AC3 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE HEC A 201' AC4 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE HEC A 202' AC5 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE HEC A 203' AC6 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE HEC A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 PRO A 5 ? PRO A 5 . ? 1_555 ? 2 AC1 11 ASP A 6 ? ASP A 6 . ? 1_555 ? 3 AC1 11 LYS A 7 ? LYS A 7 . ? 1_555 ? 4 AC1 11 PRO A 8 ? PRO A 8 . ? 1_555 ? 5 AC1 11 PRO A 21 ? PRO A 21 . ? 1_555 ? 6 AC1 11 HIS A 22 ? HIS A 22 . ? 1_555 ? 7 AC1 11 ALA A 23 ? ALA A 23 . ? 1_555 ? 8 AC1 11 PRO A 24 ? PRO A 24 . ? 1_555 ? 9 AC1 11 LYS A 90 ? LYS A 90 . ? 1_555 ? 10 AC1 11 HOH H . ? HOH A 2023 . ? 1_555 ? 11 AC1 11 HOH H . ? HOH A 2096 . ? 1_555 ? 12 AC2 3 LYS A 16 ? LYS A 16 . ? 1_555 ? 13 AC2 3 THR A 17 ? THR A 17 . ? 1_555 ? 14 AC2 3 LYS A 85 ? LYS A 85 . ? 1_555 ? 15 AC3 15 PRO A 2 ? PRO A 2 . ? 1_555 ? 16 AC3 15 PRO A 5 ? PRO A 5 . ? 1_555 ? 17 AC3 15 GLU A 10 ? GLU A 10 . ? 1_555 ? 18 AC3 15 PHE A 20 ? PHE A 20 . ? 1_555 ? 19 AC3 15 HIS A 22 ? HIS A 22 . ? 1_555 ? 20 AC3 15 HIS A 25 ? HIS A 25 . ? 1_555 ? 21 AC3 15 CYS A 30 ? CYS A 30 . ? 1_555 ? 22 AC3 15 CYS A 33 ? CYS A 33 . ? 1_555 ? 23 AC3 15 HIS A 34 ? HIS A 34 . ? 1_555 ? 24 AC3 15 TYR A 43 ? TYR A 43 . ? 1_555 ? 25 AC3 15 ALA A 44 ? ALA A 44 . ? 1_555 ? 26 AC3 15 LYS A 45 ? LYS A 45 . ? 1_555 ? 27 AC3 15 CYS A 46 ? CYS A 46 . ? 1_555 ? 28 AC3 15 HEC D . ? HEC A 203 . ? 1_555 ? 29 AC3 15 HOH H . ? HOH A 2092 . ? 1_555 ? 30 AC4 15 CYS A 33 ? CYS A 33 . ? 1_555 ? 31 AC4 15 HIS A 34 ? HIS A 34 . ? 1_555 ? 32 AC4 15 HIS A 35 ? HIS A 35 . ? 1_555 ? 33 AC4 15 ALA A 44 ? ALA A 44 . ? 1_555 ? 34 AC4 15 LYS A 45 ? LYS A 45 . ? 1_555 ? 35 AC4 15 CYS A 46 ? CYS A 46 . ? 1_555 ? 36 AC4 15 CYS A 51 ? CYS A 51 . ? 1_555 ? 37 AC4 15 HIS A 52 ? HIS A 52 . ? 1_555 ? 38 AC4 15 GLU A 61 ? GLU A 61 . ? 1_555 ? 39 AC4 15 GLU A 73 ? GLU A 73 . ? 1_555 ? 40 AC4 15 LEU A 74 ? LEU A 74 . ? 1_555 ? 41 AC4 15 LYS A 75 ? LYS A 75 . ? 1_555 ? 42 AC4 15 HIS A 76 ? HIS A 76 . ? 1_555 ? 43 AC4 15 HOH H . ? HOH A 2042 . ? 1_555 ? 44 AC4 15 HOH H . ? HOH A 2093 . ? 1_555 ? 45 AC5 12 GLU A 10 ? GLU A 10 . ? 1_555 ? 46 AC5 12 PHE A 20 ? PHE A 20 . ? 1_555 ? 47 AC5 12 HIS A 25 ? HIS A 25 . ? 1_555 ? 48 AC5 12 CYS A 79 ? CYS A 79 . ? 1_555 ? 49 AC5 12 CYS A 82 ? CYS A 82 . ? 1_555 ? 50 AC5 12 HIS A 83 ? HIS A 83 . ? 1_555 ? 51 AC5 12 GLU A 89 ? GLU A 89 . ? 1_555 ? 52 AC5 12 LYS A 90 ? LYS A 90 . ? 1_555 ? 53 AC5 12 LEU A 93 ? LEU A 93 . ? 1_555 ? 54 AC5 12 LEU A 97 ? LEU A 97 . ? 1_555 ? 55 AC5 12 LYS A 104 ? LYS A 104 . ? 1_555 ? 56 AC5 12 HEC B . ? HEC A 201 . ? 1_555 ? 57 AC6 20 VAL A 11 ? VAL A 11 . ? 1_555 ? 58 AC6 20 GLY A 13 ? GLY A 13 . ? 1_555 ? 59 AC6 20 SER A 14 ? SER A 14 . ? 1_555 ? 60 AC6 20 GLN A 15 ? GLN A 15 . ? 1_555 ? 61 AC6 20 LYS A 16 ? LYS A 16 . ? 1_555 ? 62 AC6 20 VAL A 18 ? VAL A 18 . ? 1_555 ? 63 AC6 20 ASP A 38 ? ASP A 38 . ? 1_555 ? 64 AC6 20 GLY A 39 ? GLY A 39 . ? 1_555 ? 65 AC6 20 LEU A 55 ? LEU A 55 . ? 1_555 ? 66 AC6 20 TYR A 65 ? TYR A 65 . ? 1_555 ? 67 AC6 20 VAL A 68 ? VAL A 68 . ? 1_555 ? 68 AC6 20 HIS A 69 ? HIS A 69 . ? 1_555 ? 69 AC6 20 HIS A 83 ? HIS A 83 . ? 1_555 ? 70 AC6 20 LEU A 97 ? LEU A 97 . ? 1_555 ? 71 AC6 20 THR A 98 ? THR A 98 . ? 1_555 ? 72 AC6 20 GLY A 99 ? GLY A 99 . ? 1_555 ? 73 AC6 20 CYS A 100 ? CYS A 100 . ? 1_555 ? 74 AC6 20 CYS A 105 ? CYS A 105 . ? 1_555 ? 75 AC6 20 HIS A 106 ? HIS A 106 . ? 1_555 ? 76 AC6 20 HOH H . ? HOH A 2095 . ? 1_555 ? # _database_PDB_matrix.entry_id 1GMB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GMB _atom_sites.fract_transf_matrix[1][1] 0.016356 _atom_sites.fract_transf_matrix[1][2] 0.009443 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018886 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009305 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 CYS 79 79 79 CYS CYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 CYS 100 100 100 CYS CYS A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 CYS 105 105 105 CYS CYS A . n A 1 106 HIS 106 106 106 HIS HIS A . n A 1 107 PRO 107 107 107 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 201 201 HEC HEC A . C 2 HEC 1 202 202 HEC HEC A . D 2 HEC 1 203 203 HEC HEC A . E 2 HEC 1 204 204 HEC HEC A . F 3 SO4 1 300 300 SO4 SO4 A . G 3 SO4 1 301 301 SO4 SO4 A . H 4 HOH 1 2001 2001 HOH HOH A . H 4 HOH 2 2002 2002 HOH HOH A . H 4 HOH 3 2003 2003 HOH HOH A . H 4 HOH 4 2004 2004 HOH HOH A . H 4 HOH 5 2005 2005 HOH HOH A . H 4 HOH 6 2006 2006 HOH HOH A . H 4 HOH 7 2007 2007 HOH HOH A . H 4 HOH 8 2008 2008 HOH HOH A . H 4 HOH 9 2009 2009 HOH HOH A . H 4 HOH 10 2010 2010 HOH HOH A . H 4 HOH 11 2011 2011 HOH HOH A . H 4 HOH 12 2012 2012 HOH HOH A . H 4 HOH 13 2013 2013 HOH HOH A . H 4 HOH 14 2014 2014 HOH HOH A . H 4 HOH 15 2015 2015 HOH HOH A . H 4 HOH 16 2016 2016 HOH HOH A . H 4 HOH 17 2017 2017 HOH HOH A . H 4 HOH 18 2018 2018 HOH HOH A . H 4 HOH 19 2019 2019 HOH HOH A . H 4 HOH 20 2020 2020 HOH HOH A . H 4 HOH 21 2021 2021 HOH HOH A . H 4 HOH 22 2022 2022 HOH HOH A . H 4 HOH 23 2023 2023 HOH HOH A . H 4 HOH 24 2024 2024 HOH HOH A . H 4 HOH 25 2025 2025 HOH HOH A . H 4 HOH 26 2026 2026 HOH HOH A . H 4 HOH 27 2027 2027 HOH HOH A . H 4 HOH 28 2028 2028 HOH HOH A . H 4 HOH 29 2029 2029 HOH HOH A . H 4 HOH 30 2030 2030 HOH HOH A . H 4 HOH 31 2031 2031 HOH HOH A . H 4 HOH 32 2032 2032 HOH HOH A . H 4 HOH 33 2033 2033 HOH HOH A . H 4 HOH 34 2034 2034 HOH HOH A . H 4 HOH 35 2035 2035 HOH HOH A . H 4 HOH 36 2036 2036 HOH HOH A . H 4 HOH 37 2037 2037 HOH HOH A . H 4 HOH 38 2038 2038 HOH HOH A . H 4 HOH 39 2039 2039 HOH HOH A . H 4 HOH 40 2040 2040 HOH HOH A . H 4 HOH 41 2041 2041 HOH HOH A . H 4 HOH 42 2042 2042 HOH HOH A . H 4 HOH 43 2043 2043 HOH HOH A . H 4 HOH 44 2044 2044 HOH HOH A . H 4 HOH 45 2045 2045 HOH HOH A . H 4 HOH 46 2046 2046 HOH HOH A . H 4 HOH 47 2047 2047 HOH HOH A . H 4 HOH 48 2048 2048 HOH HOH A . H 4 HOH 49 2049 2049 HOH HOH A . H 4 HOH 50 2050 2050 HOH HOH A . H 4 HOH 51 2051 2051 HOH HOH A . H 4 HOH 52 2052 2052 HOH HOH A . H 4 HOH 53 2053 2053 HOH HOH A . H 4 HOH 54 2054 2054 HOH HOH A . H 4 HOH 55 2055 2055 HOH HOH A . H 4 HOH 56 2056 2056 HOH HOH A . H 4 HOH 57 2057 2057 HOH HOH A . H 4 HOH 58 2058 2058 HOH HOH A . H 4 HOH 59 2059 2059 HOH HOH A . H 4 HOH 60 2060 2060 HOH HOH A . H 4 HOH 61 2061 2061 HOH HOH A . H 4 HOH 62 2062 2062 HOH HOH A . H 4 HOH 63 2063 2063 HOH HOH A . H 4 HOH 64 2064 2064 HOH HOH A . H 4 HOH 65 2065 2065 HOH HOH A . H 4 HOH 66 2066 2066 HOH HOH A . H 4 HOH 67 2067 2067 HOH HOH A . H 4 HOH 68 2068 2068 HOH HOH A . H 4 HOH 69 2069 2069 HOH HOH A . H 4 HOH 70 2070 2070 HOH HOH A . H 4 HOH 71 2071 2071 HOH HOH A . H 4 HOH 72 2072 2072 HOH HOH A . H 4 HOH 73 2073 2073 HOH HOH A . H 4 HOH 74 2074 2074 HOH HOH A . H 4 HOH 75 2075 2075 HOH HOH A . H 4 HOH 76 2076 2076 HOH HOH A . H 4 HOH 77 2077 2077 HOH HOH A . H 4 HOH 78 2078 2078 HOH HOH A . H 4 HOH 79 2079 2079 HOH HOH A . H 4 HOH 80 2080 2080 HOH HOH A . H 4 HOH 81 2081 2081 HOH HOH A . H 4 HOH 82 2082 2082 HOH HOH A . H 4 HOH 83 2083 2083 HOH HOH A . H 4 HOH 84 2084 2084 HOH HOH A . H 4 HOH 85 2085 2085 HOH HOH A . H 4 HOH 86 2086 2086 HOH HOH A . H 4 HOH 87 2087 2087 HOH HOH A . H 4 HOH 88 2088 2088 HOH HOH A . H 4 HOH 89 2089 2089 HOH HOH A . H 4 HOH 90 2090 2090 HOH HOH A . H 4 HOH 91 2091 2091 HOH HOH A . H 4 HOH 92 2092 2092 HOH HOH A . H 4 HOH 93 2093 2093 HOH HOH A . H 4 HOH 94 2094 2094 HOH HOH A . H 4 HOH 95 2095 2095 HOH HOH A . H 4 HOH 96 2096 2096 HOH HOH A . H 4 HOH 97 2097 2097 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 22 ? A HIS 22 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NA ? B HEC . ? A HEC 201 ? 1_555 92.3 ? 2 NE2 ? A HIS 22 ? A HIS 22 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NB ? B HEC . ? A HEC 201 ? 1_555 92.7 ? 3 NA ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NB ? B HEC . ? A HEC 201 ? 1_555 89.1 ? 4 NE2 ? A HIS 22 ? A HIS 22 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NC ? B HEC . ? A HEC 201 ? 1_555 93.7 ? 5 NA ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NC ? B HEC . ? A HEC 201 ? 1_555 173.9 ? 6 NB ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NC ? B HEC . ? A HEC 201 ? 1_555 89.8 ? 7 NE2 ? A HIS 22 ? A HIS 22 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 ND ? B HEC . ? A HEC 201 ? 1_555 92.9 ? 8 NA ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 ND ? B HEC . ? A HEC 201 ? 1_555 91.0 ? 9 NB ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 ND ? B HEC . ? A HEC 201 ? 1_555 174.4 ? 10 NC ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 ND ? B HEC . ? A HEC 201 ? 1_555 89.5 ? 11 NE2 ? A HIS 22 ? A HIS 22 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NE2 ? A HIS 34 ? A HIS 34 ? 1_555 176.8 ? 12 NA ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NE2 ? A HIS 34 ? A HIS 34 ? 1_555 90.9 ? 13 NB ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NE2 ? A HIS 34 ? A HIS 34 ? 1_555 87.7 ? 14 NC ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NE2 ? A HIS 34 ? A HIS 34 ? 1_555 83.1 ? 15 ND ? B HEC . ? A HEC 201 ? 1_555 FE ? B HEC . ? A HEC 201 ? 1_555 NE2 ? A HIS 34 ? A HIS 34 ? 1_555 86.7 ? 16 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NA ? D HEC . ? A HEC 203 ? 1_555 94.6 ? 17 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NB ? D HEC . ? A HEC 203 ? 1_555 90.2 ? 18 NA ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NB ? D HEC . ? A HEC 203 ? 1_555 89.1 ? 19 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NC ? D HEC . ? A HEC 203 ? 1_555 87.5 ? 20 NA ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NC ? D HEC . ? A HEC 203 ? 1_555 177.9 ? 21 NB ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NC ? D HEC . ? A HEC 203 ? 1_555 90.6 ? 22 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 ND ? D HEC . ? A HEC 203 ? 1_555 90.8 ? 23 NA ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 ND ? D HEC . ? A HEC 203 ? 1_555 91.5 ? 24 NB ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 ND ? D HEC . ? A HEC 203 ? 1_555 178.8 ? 25 NC ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 ND ? D HEC . ? A HEC 203 ? 1_555 88.8 ? 26 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 173.6 ? 27 NA ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 91.8 ? 28 NB ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 89.4 ? 29 NC ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 86.1 ? 30 ND ? D HEC . ? A HEC 203 ? 1_555 FE ? D HEC . ? A HEC 203 ? 1_555 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 89.5 ? 31 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NA ? C HEC . ? A HEC 202 ? 1_555 90.6 ? 32 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NB ? C HEC . ? A HEC 202 ? 1_555 90.9 ? 33 NA ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NB ? C HEC . ? A HEC 202 ? 1_555 91.5 ? 34 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NC ? C HEC . ? A HEC 202 ? 1_555 90.0 ? 35 NA ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NC ? C HEC . ? A HEC 202 ? 1_555 179.4 ? 36 NB ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NC ? C HEC . ? A HEC 202 ? 1_555 88.2 ? 37 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 ND ? C HEC . ? A HEC 202 ? 1_555 89.0 ? 38 NA ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 ND ? C HEC . ? A HEC 202 ? 1_555 90.7 ? 39 NB ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 ND ? C HEC . ? A HEC 202 ? 1_555 177.8 ? 40 NC ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 ND ? C HEC . ? A HEC 202 ? 1_555 89.6 ? 41 NE2 ? A HIS 35 ? A HIS 35 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NE2 ? A HIS 52 ? A HIS 52 ? 1_555 175.3 ? 42 NA ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NE2 ? A HIS 52 ? A HIS 52 ? 1_555 91.5 ? 43 NB ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NE2 ? A HIS 52 ? A HIS 52 ? 1_555 93.3 ? 44 NC ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NE2 ? A HIS 52 ? A HIS 52 ? 1_555 87.9 ? 45 ND ? C HEC . ? A HEC 202 ? 1_555 FE ? C HEC . ? A HEC 202 ? 1_555 NE2 ? A HIS 52 ? A HIS 52 ? 1_555 86.8 ? 46 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NA ? E HEC . ? A HEC 204 ? 1_555 92.5 ? 47 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NB ? E HEC . ? A HEC 204 ? 1_555 87.7 ? 48 NA ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NB ? E HEC . ? A HEC 204 ? 1_555 88.2 ? 49 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NC ? E HEC . ? A HEC 204 ? 1_555 93.1 ? 50 NA ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NC ? E HEC . ? A HEC 204 ? 1_555 173.4 ? 51 NB ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NC ? E HEC . ? A HEC 204 ? 1_555 88.7 ? 52 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 ND ? E HEC . ? A HEC 204 ? 1_555 87.9 ? 53 NA ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 ND ? E HEC . ? A HEC 204 ? 1_555 90.6 ? 54 NB ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 ND ? E HEC . ? A HEC 204 ? 1_555 175.4 ? 55 NC ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 ND ? E HEC . ? A HEC 204 ? 1_555 93.0 ? 56 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 1_555 177.1 ? 57 NA ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 1_555 90.1 ? 58 NB ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 1_555 93.5 ? 59 NC ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 1_555 84.3 ? 60 ND ? E HEC . ? A HEC 204 ? 1_555 FE ? E HEC . ? A HEC 204 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 1_555 91.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-09-12 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-06-28 5 'Structure model' 1 4 2019-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' refine 3 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.type' 2 5 'Structure model' '_refine.pdbx_ls_cross_valid_method' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 3.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id CYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 51 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -114.62 _pdbx_validate_torsion.psi -120.20 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'SULFATE ION' SO4 4 water HOH #