data_1GO6
#
_entry.id 1GO6
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.329
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
PDB 1GO6
PDBE EBI-8712
WWPDB D_1290008712
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
PDB 1HHY unspecified 'CRYSTAL STRUCURE OF DEGLUCOBALHIMYCIN COMPLEXED WITH DAL-DAL'
PDB 1HHU unspecified 'CRYSTAL STRUCTURE OF BALHIMYCIN COMPLEXED WITH DAL-DAL'
PDB 1HHZ unspecified 'CRYSTAL STRUCTURE OF DEGLUCOBALHIMYCIN COPMLEXED WITH CELL WALL PENTAPEPTIDE'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1GO6
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 2001-10-19
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Lehmann, C.' 1
'Bunkoczi, G.' 2
'Vertesy, L.' 3
'Sheldrick, G.M.' 4
#
_citation.id primary
_citation.title
'Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors'
_citation.journal_abbrev J.Mol.Biol.
_citation.journal_volume 318
_citation.page_first 723
_citation.page_last ?
_citation.year 2002
_citation.journal_id_ASTM JMOBAK
_citation.country UK
_citation.journal_id_ISSN 0022-2836
_citation.journal_id_CSD 0070
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 12054818
_citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)00146-8'
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Lehmann, C.' 1 ?
primary 'Bunkoczi, G.' 2 ?
primary 'Vertesy, L.' 3 ?
primary 'Sheldrick, G.M.' 4 ?
#
_cell.entry_id 1GO6
_cell.length_a 88.927
_cell.length_b 28.025
_cell.length_c 50.707
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 32
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1GO6
_symmetry.space_group_name_H-M 'P 21 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 18
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat BALHIMYCIN 1149.977 8 ? ? ? ?
2 polymer syn 'PEPTIDE LYS-DAL-DAL' 289.351 4 ? ? ? ?
3 non-polymer man beta-D-glucopyranose 180.156 8 ? ? ? ?
4 non-polymer man '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' 177.198 8 ? ? ? ?
5 non-polymer syn 'CITRIC ACID' 192.124 5 ? ? ? ?
6 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ?
7 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ?
8 water nat water 18.015 259 ? ? ? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no yes '(MLU)(OMZ)N(GHP)(GHP)(OMY)(3FG)' XXNGGYX A,C,E,G,I,K,M,O ?
2 'polypeptide(L)' no yes 'K(DAL)(DAL)' KAA B,D,F,H ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MLU n
1 2 OMZ n
1 3 ASN n
1 4 GHP n
1 5 GHP n
1 6 OMY n
1 7 3FG n
2 1 LYS n
2 2 DAL n
2 3 DAL n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'AMYCOLATOPSIS SP.'
_entity_src_nat.pdbx_ncbi_taxonomy_id 37632
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain 'Y-86, 21022'
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_pdbx_entity_src_syn.entity_id 2
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific 'SYNTHETIC CONSTRUCT'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
1 NOR NOR00709 1 ? ? NOR00709 ?
2 PDB 1GO6 2 ? ? 1GO6 ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1GO6 A 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
2 2 1GO6 B 1 ? 3 ? 1GO6 1 ? 3 ? 1 3
3 1 1GO6 C 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
4 2 1GO6 D 1 ? 3 ? 1GO6 1 ? 3 ? 1 3
5 1 1GO6 E 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
6 2 1GO6 F 1 ? 3 ? 1GO6 1 ? 3 ? 1 3
7 1 1GO6 G 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
8 2 1GO6 H 1 ? 3 ? 1GO6 1 ? 3 ? 1 3
9 1 1GO6 I 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
10 1 1GO6 K 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
11 1 1GO6 M 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
12 1 1GO6 O 1 ? 7 ? NOR00709 1 ? 7 ? 1 7
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
3FG 'L-peptide linking' . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ? 'C8 H9 N O4' 183.161
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156
CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124
DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093
DVC 'L-saccharide, alpha linking' . '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' ? 'C7 H15 N O4' 177.198
GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162
HOH non-polymer . WATER ? 'H2 O' 18.015
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199
MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174
MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174
OMY 'L-peptide linking' n '(betaR)-3-chloro-beta-hydroxy-L-tyrosine' ? 'C9 H10 Cl N O4' 231.633
OMZ 'D-peptide linking' . '(betaR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE' ? 'C9 H10 Cl N O4' 231.633
#
_exptl.entry_id 1GO6
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.90
_exptl_crystal.density_percent_sol 57.6
_exptl_crystal.description 'ADDITIONAL DATA SET WAS COLLECTED AT CU KALPHA RADIATION'
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 4.00
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details '0.3 M NA3CIT/H3CIT PH=4, 25% MPD, pH 4.00'
#
_diffrn.id 1
_diffrn.ambient_temp 100.0
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date 1998-09-15
_diffrn_detector.details MIRRORS
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9076
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11'
_diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG'
_diffrn_source.pdbx_synchrotron_beamline X11
_diffrn_source.pdbx_wavelength 0.9076
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 1GO6
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 90.000
_reflns.d_resolution_high 0.980
_reflns.number_obs 72913
_reflns.number_all ?
_reflns.percent_possible_obs 98.6
_reflns.pdbx_Rmerge_I_obs 0.04400
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 14.8100
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 3.500
#
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 0.98
_reflns_shell.d_res_low 1.10
_reflns_shell.percent_possible_all 95.5
_reflns_shell.Rmerge_I_obs 0.17740
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 6.720
_reflns_shell.pdbx_redundancy ?
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 1GO6
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_all 72913
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 89.0
_refine.ls_d_res_high 0.98
_refine.ls_percent_reflns_obs 98.6
_refine.ls_R_factor_obs 0.1288
_refine.ls_R_factor_all 0.1303
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free 0.1592
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5
_refine.ls_number_reflns_R_free 3629
_refine.ls_number_parameters 12104
_refine.ls_number_restraints 16491
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details 'MOEWS & KRETSINGER'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct SAD
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'ENGH & HUBER'
_refine.pdbx_stereochem_target_val_spec_case 'RESTRAINTS FOR BALHIMYCIN FROM CSD'
_refine.pdbx_R_Free_selection_details 'THIN SHELLS'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_analyze.entry_id 1GO6
_refine_analyze.Luzzati_coordinate_error_obs ?
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen 728.86
_refine_analyze.occupancy_sum_non_hydrogen 1106.67
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 720
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 246
_refine_hist.number_atoms_solvent 259
_refine_hist.number_atoms_total 1225
_refine_hist.d_res_high 0.98
_refine_hist.d_res_low 89.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
s_bond_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ?
s_angle_d 0.045 ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ?
s_from_restr_planes 0.096 ? ? ? 'X-RAY DIFFRACTION' ?
s_zero_chiral_vol 0.097 ? ? ? 'X-RAY DIFFRACTION' ?
s_non_zero_chiral_vol 0.076 ? ? ? 'X-RAY DIFFRACTION' ?
s_anti_bump_dis_restr 0.063 ? ? ? 'X-RAY DIFFRACTION' ?
s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_adp_cmpnt 0.029 ? ? ? 'X-RAY DIFFRACTION' ?
s_approx_iso_adps 0.082 ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine.entry_id 1GO6
_pdbx_refine.R_factor_all_no_cutoff 0.1303
_pdbx_refine.R_factor_obs_no_cutoff 0.1288
_pdbx_refine.free_R_factor_no_cutoff 0.1592
_pdbx_refine.free_R_error_no_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5
_pdbx_refine.free_R_val_test_set_ct_no_cutoff 3629
_pdbx_refine.R_factor_all_4sig_cutoff 0.1254
_pdbx_refine.R_factor_obs_4sig_cutoff 0.1239
_pdbx_refine.free_R_factor_4sig_cutoff 0.1542
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 3251
_pdbx_refine.number_reflns_obs_4sig_cutoff 65449
#
loop_
_struct_ncs_oper.id
_struct_ncs_oper.code
_struct_ncs_oper.details
_struct_ncs_oper.matrix[1][1]
_struct_ncs_oper.matrix[1][2]
_struct_ncs_oper.matrix[1][3]
_struct_ncs_oper.matrix[2][1]
_struct_ncs_oper.matrix[2][2]
_struct_ncs_oper.matrix[2][3]
_struct_ncs_oper.matrix[3][1]
_struct_ncs_oper.matrix[3][2]
_struct_ncs_oper.matrix[3][3]
_struct_ncs_oper.vector[1]
_struct_ncs_oper.vector[2]
_struct_ncs_oper.vector[3]
1 given ? 0.981900 0.189380 0.001160 0.189380 -0.981900 0.001730 0.001460 -0.001480 -1.000000 -1.10154 10.82174 76.56329
2 given ? -0.735960 0.644860 -0.206170 -0.676960 -0.696850 0.236910 0.009100 0.313930 0.949400 131.91583 61.36913 7.03697
3 given ? -0.607780 -0.769430 0.196450 -0.791250 0.565790 -0.231980 0.067340 -0.296430 -0.952680 124.77338 71.83916 83.28141
4 given ? 0.073400 0.993390 -0.088290 0.994910 -0.079070 -0.062490 -0.069060 -0.083260 -0.994130 64.14457 -61.33841 102.40584
5 given ? 0.277390 -0.954640 0.108280 0.955950 0.285500 0.068150 -0.095970 0.084610 0.991780 66.03882 -67.88586 26.25597
6 given ? 0.610840 -0.789980 0.052920 0.783830 0.612810 0.100430 -0.111770 -0.019860 0.993540 63.37468 -51.10247 17.46341
7 given ? 0.821230 0.570590 -0.000890 0.569360 -0.819560 -0.064480 -0.037520 0.052440 -0.997920 17.46895 5.25723 86.46360
#
_struct.entry_id 1GO6
_struct.title 'Balhimycin in complex with Lys-D-ala-D-ala'
_struct.pdbx_descriptor 'BALHIMYCIN, PEPTIDE LYS-DAL-DAL'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1GO6
_struct_keywords.pdbx_keywords ANTIBIOTIC/PEPTIDE
_struct_keywords.text 'GLYCOPEPTIDE, ANTIBIOTICS, ANTIBIOTIC-PEPTIDE COMPLEX, BACTERIAL CELL-WALL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 1 ?
D N N 2 ?
E N N 1 ?
F N N 2 ?
G N N 1 ?
H N N 2 ?
I N N 1 ?
J N N 1 ?
K N N 1 ?
L N N 1 ?
M N N 3 ?
N N N 4 ?
O N N 3 ?
P N N 4 ?
Q N N 3 ?
R N N 4 ?
S N N 5 ?
T N N 3 ?
U N N 4 ?
V N N 3 ?
W N N 4 ?
X N N 5 ?
Y N N 6 ?
Z N N 3 ?
AA N N 4 ?
BA N N 5 ?
CA N N 7 ?
DA N N 3 ?
EA N N 4 ?
FA N N 5 ?
GA N N 3 ?
HA N N 4 ?
IA N N 5 ?
JA N N 8 ?
KA N N 8 ?
LA N N 8 ?
MA N N 8 ?
NA N N 8 ?
OA N N 8 ?
PA N N 8 ?
QA N N 8 ?
RA N N 8 ?
SA N N 8 ?
TA N N 8 ?
UA N N 8 ?
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A MLU 1 C ? ? ? 1_555 A OMZ 2 N ? ? A MLU 1 A OMZ 2 1_555 ? ? ? ? ? ? ? 1.348 ? ?
covale2 covale both ? A OMZ 2 C ? ? ? 1_555 A ASN 3 N ? ? A OMZ 2 A ASN 3 1_555 ? ? ? ? ? ? ? 1.316 ? ?
covale3 covale none ? A OMZ 2 OH ? ? ? 1_555 A GHP 4 C3 ? ? A OMZ 2 A GHP 4 1_555 ? ? ? ? ? ? ? 1.370 ? ?
covale4 covale both ? A ASN 3 C ? ? ? 1_555 A GHP 4 N ? ? A ASN 3 A GHP 4 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale5 covale both ? A GHP 4 C ? ? ? 1_555 A GHP 5 N ? ? A GHP 4 A GHP 5 1_555 ? ? ? ? ? ? ? 1.341 ? ?
covale6 covale none ? A GHP 4 C5 ? ? ? 1_555 A OMY 6 OCZ ? ? A GHP 4 A OMY 6 1_555 ? ? ? ? ? ? ? 1.385 ? ?
covale7 covale one ? A GHP 4 O4 ? ? ? 1_555 M BGC . C1 ? ? A GHP 4 A BGC 8 1_555 ? ? ? ? ? ? ? 1.429 ? ?
covale8 covale both ? A GHP 5 C ? ? ? 1_555 A OMY 6 N ? ? A GHP 5 A OMY 6 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale9 covale none ? A GHP 5 C5 ? ? ? 1_555 A 3FG 7 CG1 ? ? A GHP 5 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.488 ? ?
covale10 covale both ? A OMY 6 C ? ? ? 1_555 A 3FG 7 N ? ? A OMY 6 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.333 ? ?
covale11 covale one ? A OMY 6 ODE ? ? ? 1_555 N DVC . C1 ? ? A OMY 6 A DVC 9 1_555 ? ? ? ? ? ? ? 1.420 ? ?
covale12 covale both ? B LYS 1 C ? ? ? 1_555 B DAL 2 N ? ? B LYS 1 B DAL 2 1_555 ? ? ? ? ? ? ? 1.314 ? ?
covale13 covale both ? B DAL 2 C ? ? ? 1_555 B DAL 3 N ? ? B DAL 2 B DAL 3 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale14 covale both ? C MLU 1 C ? ? ? 1_555 C OMZ 2 N ? ? C MLU 1 C OMZ 2 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale15 covale both ? C OMZ 2 C ? ? ? 1_555 C ASN 3 N ? ? C OMZ 2 C ASN 3 1_555 ? ? ? ? ? ? ? 1.306 ? ?
covale16 covale none ? C OMZ 2 OH ? ? ? 1_555 C GHP 4 C3 ? ? C OMZ 2 C GHP 4 1_555 ? ? ? ? ? ? ? 1.386 ? ?
covale17 covale both ? C ASN 3 C ? ? ? 1_555 C GHP 4 N ? ? C ASN 3 C GHP 4 1_555 ? ? ? ? ? ? ? 1.322 ? ?
covale18 covale both ? C GHP 4 C ? ? ? 1_555 C GHP 5 N ? ? C GHP 4 C GHP 5 1_555 ? ? ? ? ? ? ? 1.346 ? ?
covale19 covale none ? C GHP 4 C5 ? ? ? 1_555 C OMY 6 OCZ ? ? C GHP 4 C OMY 6 1_555 ? ? ? ? ? ? ? 1.400 ? ?
covale20 covale one ? C GHP 4 O4 ? ? ? 1_555 O BGC . C1 ? ? C GHP 4 C BGC 8 1_555 ? ? ? ? ? ? ? 1.423 ? ?
covale21 covale both ? C GHP 5 C ? ? ? 1_555 C OMY 6 N ? ? C GHP 5 C OMY 6 1_555 ? ? ? ? ? ? ? 1.333 ? ?
covale22 covale none ? C GHP 5 C5 ? ? ? 1_555 C 3FG 7 CG1 ? ? C GHP 5 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.493 ? ?
covale23 covale both ? C OMY 6 C ? ? ? 1_555 C 3FG 7 N ? ? C OMY 6 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale24 covale one ? C OMY 6 ODE ? ? ? 1_555 P DVC . C1 ? ? C OMY 6 C DVC 9 1_555 ? ? ? ? ? ? ? 1.436 ? ?
covale25 covale both ? D LYS 1 C ? ? ? 1_555 D DAL 2 N ? ? D LYS 1 D DAL 2 1_555 ? ? ? ? ? ? ? 1.309 ? ?
covale26 covale both ? D DAL 2 C ? ? ? 1_555 D DAL 3 N ? ? D DAL 2 D DAL 3 1_555 ? ? ? ? ? ? ? 1.320 ? ?
covale27 covale both ? E MLU 1 C ? ? ? 1_555 E OMZ 2 N ? ? E MLU 1 E OMZ 2 1_555 ? ? ? ? ? ? ? 1.353 ? ?
covale28 covale both ? E OMZ 2 C ? ? ? 1_555 E ASN 3 N ? ? E OMZ 2 E ASN 3 1_555 ? ? ? ? ? ? ? 1.331 ? ?
covale29 covale none ? E OMZ 2 OH ? ? ? 1_555 E GHP 4 C3 ? ? E OMZ 2 E GHP 4 1_555 ? ? ? ? ? ? ? 1.384 ? ?
covale30 covale both ? E ASN 3 C ? ? ? 1_555 E GHP 4 N ? ? E ASN 3 E GHP 4 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale31 covale both ? E GHP 4 C ? ? ? 1_555 E GHP 5 N ? ? E GHP 4 E GHP 5 1_555 ? ? ? ? ? ? ? 1.323 ? ?
covale32 covale none ? E GHP 4 C5 ? ? ? 1_555 E OMY 6 OCZ ? ? E GHP 4 E OMY 6 1_555 ? ? ? ? ? ? ? 1.384 ? ?
covale33 covale one ? E GHP 4 O4 ? ? ? 1_555 Q BGC . C1 ? ? E GHP 4 E BGC 8 1_555 ? ? ? ? ? ? ? 1.429 ? ?
covale34 covale both ? E GHP 5 C ? ? ? 1_555 E OMY 6 N ? ? E GHP 5 E OMY 6 1_555 ? ? ? ? ? ? ? 1.324 ? ?
covale35 covale none ? E GHP 5 C5 ? ? ? 1_555 E 3FG 7 CG1 ? ? E GHP 5 E 3FG 7 1_555 ? ? ? ? ? ? ? 1.475 ? ?
covale36 covale both ? E OMY 6 C ? ? ? 1_555 E 3FG 7 N ? ? E OMY 6 E 3FG 7 1_555 ? ? ? ? ? ? ? 1.347 ? ?
covale37 covale one ? E OMY 6 ODE ? ? ? 1_555 R DVC . C1 ? ? E OMY 6 E DVC 9 1_555 ? ? ? ? ? ? ? 1.391 ? ?
covale38 covale both ? F LYS 1 C A ? ? 1_555 F DAL 2 N A ? F LYS 1 F DAL 2 1_555 ? ? ? ? ? ? ? 1.288 ? ?
covale39 covale both ? F LYS 1 C B ? ? 1_555 F DAL 2 N B ? F LYS 1 F DAL 2 1_555 ? ? ? ? ? ? ? 1.322 ? ?
covale40 covale both ? F DAL 2 C ? ? ? 1_555 F DAL 3 N ? ? F DAL 2 F DAL 3 1_555 ? ? ? ? ? ? ? 1.315 ? ?
covale41 covale both ? G MLU 1 C ? ? ? 1_555 G OMZ 2 N ? ? G MLU 1 G OMZ 2 1_555 ? ? ? ? ? ? ? 1.354 ? ?
covale42 covale both ? G OMZ 2 C ? ? ? 1_555 G ASN 3 N ? ? G OMZ 2 G ASN 3 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale43 covale none ? G OMZ 2 OH ? ? ? 1_555 G GHP 4 C3 ? ? G OMZ 2 G GHP 4 1_555 ? ? ? ? ? ? ? 1.387 ? ?
covale44 covale both ? G ASN 3 C ? ? ? 1_555 G GHP 4 N ? ? G ASN 3 G GHP 4 1_555 ? ? ? ? ? ? ? 1.311 ? ?
covale45 covale both ? G GHP 4 C ? ? ? 1_555 G GHP 5 N ? ? G GHP 4 G GHP 5 1_555 ? ? ? ? ? ? ? 1.353 ? ?
covale46 covale none ? G GHP 4 C5 ? ? ? 1_555 G OMY 6 OCZ ? ? G GHP 4 G OMY 6 1_555 ? ? ? ? ? ? ? 1.383 ? ?
covale47 covale one ? G GHP 4 O4 ? ? ? 1_555 T BGC . C1 ? ? G GHP 4 G BGC 8 1_555 ? ? ? ? ? ? ? 1.441 ? ?
covale48 covale both ? G GHP 5 C ? ? ? 1_555 G OMY 6 N ? ? G GHP 5 G OMY 6 1_555 ? ? ? ? ? ? ? 1.350 ? ?
covale49 covale none ? G GHP 5 C5 ? ? ? 1_555 G 3FG 7 CG1 ? ? G GHP 5 G 3FG 7 1_555 ? ? ? ? ? ? ? 1.504 ? ?
covale50 covale both ? G OMY 6 C ? ? ? 1_555 G 3FG 7 N ? ? G OMY 6 G 3FG 7 1_555 ? ? ? ? ? ? ? 1.343 ? ?
covale51 covale one ? G OMY 6 ODE B ? ? 1_555 U DVC . C1 B ? G OMY 6 G DVC 9 1_555 ? ? ? ? ? ? ? 1.406 ? ?
covale52 covale one ? G OMY 6 ODE A ? ? 1_555 U DVC . C1 A ? G OMY 6 G DVC 9 1_555 ? ? ? ? ? ? ? 1.413 ? ?
covale53 covale both ? H LYS 1 C ? ? ? 1_555 H DAL 2 N ? ? H LYS 1 H DAL 2 1_555 ? ? ? ? ? ? ? 1.312 ? ?
covale54 covale both ? H DAL 2 C ? ? ? 1_555 H DAL 3 N ? ? H DAL 2 H DAL 3 1_555 ? ? ? ? ? ? ? 1.312 ? ?
covale55 covale both ? I MLU 1 C B ? ? 1_555 I OMZ 2 N B ? I MLU 1 I OMZ 2 1_555 ? ? ? ? ? ? ? 1.363 ? ?
covale56 covale both ? I MLU 1 C A ? ? 1_555 I OMZ 2 N A ? I MLU 1 I OMZ 2 1_555 ? ? ? ? ? ? ? 1.372 ? ?
covale57 covale both ? I OMZ 2 C ? ? ? 1_555 I ASN 3 N ? ? I OMZ 2 I ASN 3 1_555 ? ? ? ? ? ? ? 1.316 ? ?
covale58 covale none ? I OMZ 2 OH ? ? ? 1_555 I GHP 4 C3 ? ? I OMZ 2 I GHP 4 1_555 ? ? ? ? ? ? ? 1.373 ? ?
covale59 covale both ? I ASN 3 C ? ? ? 1_555 I GHP 4 N ? ? I ASN 3 I GHP 4 1_555 ? ? ? ? ? ? ? 1.317 ? ?
covale60 covale both ? I GHP 4 C ? ? ? 1_555 I GHP 5 N ? ? I GHP 4 I GHP 5 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale61 covale none ? I GHP 4 C5 ? ? ? 1_555 I OMY 6 OCZ ? ? I GHP 4 I OMY 6 1_555 ? ? ? ? ? ? ? 1.362 ? ?
covale62 covale one ? I GHP 4 O4 ? ? ? 1_555 V BGC . C1 ? ? I GHP 4 I BGC 8 1_555 ? ? ? ? ? ? ? 1.403 ? ?
covale63 covale both ? I GHP 5 C ? ? ? 1_555 I OMY 6 N ? ? I GHP 5 I OMY 6 1_555 ? ? ? ? ? ? ? 1.341 ? ?
covale64 covale none ? I GHP 5 C5 ? ? ? 1_555 I 3FG 7 CG1 ? ? I GHP 5 I 3FG 7 1_555 ? ? ? ? ? ? ? 1.503 ? ?
covale65 covale both ? I OMY 6 C ? ? ? 1_555 I 3FG 7 N ? ? I OMY 6 I 3FG 7 1_555 ? ? ? ? ? ? ? 1.327 ? ?
covale66 covale one ? I OMY 6 ODE ? ? ? 1_555 W DVC . C1 ? ? I OMY 6 I DVC 9 1_555 ? ? ? ? ? ? ? 1.401 ? ?
covale67 covale both ? J MLU 1 C A ? ? 1_555 J OMZ 2 N A ? K MLU 1 K OMZ 2 1_555 ? ? ? ? ? ? ? 1.392 ? ?
covale68 covale both ? J MLU 1 C B ? ? 1_555 J OMZ 2 N B ? K MLU 1 K OMZ 2 1_555 ? ? ? ? ? ? ? 1.376 ? ?
covale69 covale both ? J OMZ 2 C ? ? ? 1_555 J ASN 3 N ? ? K OMZ 2 K ASN 3 1_555 ? ? ? ? ? ? ? 1.320 ? ?
covale70 covale none ? J OMZ 2 OH ? ? ? 1_555 J GHP 4 C3 ? ? K OMZ 2 K GHP 4 1_555 ? ? ? ? ? ? ? 1.398 ? ?
covale71 covale both ? J ASN 3 C ? ? ? 1_555 J GHP 4 N ? ? K ASN 3 K GHP 4 1_555 ? ? ? ? ? ? ? 1.330 ? ?
covale72 covale both ? J GHP 4 C ? ? ? 1_555 J GHP 5 N ? ? K GHP 4 K GHP 5 1_555 ? ? ? ? ? ? ? 1.309 ? ?
covale73 covale none ? J GHP 4 C5 ? ? ? 1_555 J OMY 6 OCZ ? ? K GHP 4 K OMY 6 1_555 ? ? ? ? ? ? ? 1.387 ? ?
covale74 covale one ? J GHP 4 O4 ? ? ? 1_555 Z BGC . C1 ? ? K GHP 4 K BGC 8 1_555 ? ? ? ? ? ? ? 1.417 ? ?
covale75 covale both ? J GHP 5 C ? ? ? 1_555 J OMY 6 N ? ? K GHP 5 K OMY 6 1_555 ? ? ? ? ? ? ? 1.307 ? ?
covale76 covale none ? J GHP 5 C5 ? ? ? 1_555 J 3FG 7 CG1 ? ? K GHP 5 K 3FG 7 1_555 ? ? ? ? ? ? ? 1.491 ? ?
covale77 covale both ? J OMY 6 C ? ? ? 1_555 J 3FG 7 N ? ? K OMY 6 K 3FG 7 1_555 ? ? ? ? ? ? ? 1.323 ? ?
covale78 covale one ? J OMY 6 ODE ? ? ? 1_555 AA DVC . C1 ? ? K OMY 6 K DVC 9 1_555 ? ? ? ? ? ? ? 1.415 ? ?
covale79 covale both ? K MLU 1 C ? ? ? 1_555 K OMZ 2 N ? ? M MLU 1 M OMZ 2 1_555 ? ? ? ? ? ? ? 1.355 ? ?
covale80 covale both ? K OMZ 2 C ? ? ? 1_555 K ASN 3 N ? ? M OMZ 2 M ASN 3 1_555 ? ? ? ? ? ? ? 1.300 ? ?
covale81 covale none ? K OMZ 2 OH ? ? ? 1_555 K GHP 4 C3 ? ? M OMZ 2 M GHP 4 1_555 ? ? ? ? ? ? ? 1.413 ? ?
covale82 covale both ? K ASN 3 C ? ? ? 1_555 K GHP 4 N ? ? M ASN 3 M GHP 4 1_555 ? ? ? ? ? ? ? 1.308 ? ?
covale83 covale both ? K GHP 4 C ? ? ? 1_555 K GHP 5 N ? ? M GHP 4 M GHP 5 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale84 covale none ? K GHP 4 C5 ? ? ? 1_555 K OMY 6 OCZ ? ? M GHP 4 M OMY 6 1_555 ? ? ? ? ? ? ? 1.366 ? ?
covale85 covale one ? K GHP 4 O4 B ? ? 1_555 DA BGC . C1 B ? M GHP 4 M BGC 8 1_555 ? ? ? ? ? ? ? 1.427 ? ?
covale86 covale one ? K GHP 4 O4 A ? ? 1_555 DA BGC . C1 A ? M GHP 4 M BGC 8 1_555 ? ? ? ? ? ? ? 1.438 ? ?
covale87 covale both ? K GHP 5 C ? ? ? 1_555 K OMY 6 N ? ? M GHP 5 M OMY 6 1_555 ? ? ? ? ? ? ? 1.327 ? ?
covale88 covale none ? K GHP 5 C5 ? ? ? 1_555 K 3FG 7 CG1 ? ? M GHP 5 M 3FG 7 1_555 ? ? ? ? ? ? ? 1.493 ? ?
covale89 covale both ? K OMY 6 C ? ? ? 1_555 K 3FG 7 N ? ? M OMY 6 M 3FG 7 1_555 ? ? ? ? ? ? ? 1.364 ? ?
covale90 covale one ? K OMY 6 ODE B ? ? 1_555 EA DVC . C1 B ? M OMY 6 M DVC 9 1_555 ? ? ? ? ? ? ? 1.409 ? ?
covale91 covale one ? K OMY 6 ODE A ? ? 1_555 EA DVC . C1 A ? M OMY 6 M DVC 9 1_555 ? ? ? ? ? ? ? 1.425 ? ?
covale92 covale both ? L MLU 1 C B ? ? 1_555 L OMZ 2 N B ? O MLU 1 O OMZ 2 1_555 ? ? ? ? ? ? ? 1.368 ? ?
covale93 covale both ? L MLU 1 C A ? ? 1_555 L OMZ 2 N A ? O MLU 1 O OMZ 2 1_555 ? ? ? ? ? ? ? 1.366 ? ?
covale94 covale both ? L OMZ 2 C ? ? ? 1_555 L ASN 3 N ? ? O OMZ 2 O ASN 3 1_555 ? ? ? ? ? ? ? 1.293 ? ?
covale95 covale none ? L OMZ 2 OH ? ? ? 1_555 L GHP 4 C3 ? ? O OMZ 2 O GHP 4 1_555 ? ? ? ? ? ? ? 1.364 ? ?
covale96 covale both ? L ASN 3 C ? ? ? 1_555 L GHP 4 N ? ? O ASN 3 O GHP 4 1_555 ? ? ? ? ? ? ? 1.344 ? ?
covale97 covale both ? L GHP 4 C ? ? ? 1_555 L GHP 5 N ? ? O GHP 4 O GHP 5 1_555 ? ? ? ? ? ? ? 1.334 ? ?
covale98 covale none ? L GHP 4 C5 ? ? ? 1_555 L OMY 6 OCZ ? ? O GHP 4 O OMY 6 1_555 ? ? ? ? ? ? ? 1.351 ? ?
covale99 covale one ? L GHP 4 O4 ? ? ? 1_555 GA BGC . C1 ? ? O GHP 4 O BGC 8 1_555 ? ? ? ? ? ? ? 1.411 ? ?
covale100 covale both ? L GHP 5 C ? ? ? 1_555 L OMY 6 N ? ? O GHP 5 O OMY 6 1_555 ? ? ? ? ? ? ? 1.334 ? ?
covale101 covale none ? L GHP 5 C5 ? ? ? 1_555 L 3FG 7 CG1 ? ? O GHP 5 O 3FG 7 1_555 ? ? ? ? ? ? ? 1.492 ? ?
covale102 covale both ? L OMY 6 C ? ? ? 1_555 L 3FG 7 N ? ? O OMY 6 O 3FG 7 1_555 ? ? ? ? ? ? ? 1.344 ? ?
covale103 covale one ? L OMY 6 ODE B ? ? 1_555 HA DVC . C1 B ? O OMY 6 O DVC 9 1_555 ? ? ? ? ? ? ? 1.399 ? ?
covale104 covale one ? L OMY 6 ODE A ? ? 1_555 HA DVC . C1 A ? O OMY 6 O DVC 9 1_555 ? ? ? ? ? ? ? 1.406 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 GHP 5 A . ? GHP 5 A OMY 6 A ? OMY 6 A 1 12.30
2 GHP 5 C . ? GHP 5 C OMY 6 C ? OMY 6 C 1 9.93
3 GHP 5 E . ? GHP 5 E OMY 6 E ? OMY 6 E 1 12.37
4 GHP 5 G . ? GHP 5 G OMY 6 G ? OMY 6 G 1 12.22
5 GHP 5 I . ? GHP 5 I OMY 6 I ? OMY 6 I 1 7.02
6 GHP 5 J . ? GHP 5 K OMY 6 J ? OMY 6 K 1 4.91
7 GHP 5 K . ? GHP 5 M OMY 6 K ? OMY 6 M 1 8.60
8 GHP 5 L . ? GHP 5 O OMY 6 L ? OMY 6 O 1 10.20
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA ? 2 ?
CA ? 2 ?
EA ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA 1 2 ? anti-parallel
CA 1 2 ? anti-parallel
EA 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA 1 GHP A 4 ? GHP A 5 ? GHP A 4 GHP A 5
AA 2 DAL B 2 ? DAL B 3 ? DAL B 2 DAL B 3
CA 1 GHP C 4 ? GHP C 5 ? GHP C 4 GHP C 5
CA 2 DAL D 2 ? DAL D 3 ? DAL D 2 DAL D 3
EA 1 GHP E 4 ? GHP E 5 ? GHP E 4 GHP E 5
EA 2 DAL F 2 ? DAL F 3 ? DAL F 2 DAL F 3
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA 1 2 N GHP A 4 ? N GHP A 4 O DAL B 3 ? O DAL B 3
CA 1 2 N GHP C 4 ? N GHP C 4 O DAL D 3 ? O DAL D 3
EA 1 2 N GHP E 4 ? N GHP E 4 O DAL F 3 ? O DAL F 3
#
_database_PDB_matrix.entry_id 1GO6
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 1GO6
_atom_sites.fract_transf_matrix[1][1] 0.011245
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035682
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019721
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
N
O
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MLU 1 1 1 MLU MLU A . n
A 1 2 OMZ 2 2 2 OMZ OMZ A . n
A 1 3 ASN 3 3 3 ASN ASN A . n
A 1 4 GHP 4 4 4 GHP GHP A . n
A 1 5 GHP 5 5 5 GHP GHP A . n
A 1 6 OMY 6 6 6 OMY OMY A . n
A 1 7 3FG 7 7 7 3FG 3FG A . n
B 2 1 LYS 1 1 1 LYS LYS B . n
B 2 2 DAL 2 2 2 DAL DAL B . n
B 2 3 DAL 3 3 3 DAL DAL B . n
C 1 1 MLU 1 1 1 MLU MLU C . n
C 1 2 OMZ 2 2 2 OMZ OMZ C . n
C 1 3 ASN 3 3 3 ASN ASN C . n
C 1 4 GHP 4 4 4 GHP GHP C . n
C 1 5 GHP 5 5 5 GHP GHP C . n
C 1 6 OMY 6 6 6 OMY OMY C . n
C 1 7 3FG 7 7 7 3FG 3FG C . n
D 2 1 LYS 1 1 1 LYS LYS D . n
D 2 2 DAL 2 2 2 DAL DAL D . n
D 2 3 DAL 3 3 3 DAL DAL D . n
E 1 1 MLU 1 1 1 MLU MLU E . n
E 1 2 OMZ 2 2 2 OMZ OMZ E . n
E 1 3 ASN 3 3 3 ASN ASN E . n
E 1 4 GHP 4 4 4 GHP GHP E . n
E 1 5 GHP 5 5 5 GHP GHP E . n
E 1 6 OMY 6 6 6 OMY OMY E . n
E 1 7 3FG 7 7 7 3FG 3FG E . n
F 2 1 LYS 1 1 1 LYS LYS F . n
F 2 2 DAL 2 2 2 DAL DAL F . n
F 2 3 DAL 3 3 3 DAL DAL F . n
G 1 1 MLU 1 1 1 MLU MLU G . n
G 1 2 OMZ 2 2 2 OMZ OMZ G . n
G 1 3 ASN 3 3 3 ASN ASN G . n
G 1 4 GHP 4 4 4 GHP GHP G . n
G 1 5 GHP 5 5 5 GHP GHP G . n
G 1 6 OMY 6 6 6 OMY OMY G . n
G 1 7 3FG 7 7 7 3FG 3FG G . n
H 2 1 LYS 1 1 1 LYS LYS H . n
H 2 2 DAL 2 2 2 DAL DAL H . n
H 2 3 DAL 3 3 3 DAL DAL H . n
I 1 1 MLU 1 1 1 MLU MLU I . n
I 1 2 OMZ 2 2 2 OMZ OMZ I . n
I 1 3 ASN 3 3 3 ASN ASN I . n
I 1 4 GHP 4 4 4 GHP GHP I . n
I 1 5 GHP 5 5 5 GHP GHP I . n
I 1 6 OMY 6 6 6 OMY OMY I . n
I 1 7 3FG 7 7 7 3FG 3FG I . n
J 1 1 MLU 1 1 1 MLU MLU K . n
J 1 2 OMZ 2 2 2 OMZ OMZ K . n
J 1 3 ASN 3 3 3 ASN ASN K . n
J 1 4 GHP 4 4 4 GHP GHP K . n
J 1 5 GHP 5 5 5 GHP GHP K . n
J 1 6 OMY 6 6 6 OMY OMY K . n
J 1 7 3FG 7 7 7 3FG 3FG K . n
K 1 1 MLU 1 1 1 MLU MLU M . n
K 1 2 OMZ 2 2 2 OMZ OMZ M . n
K 1 3 ASN 3 3 3 ASN ASN M . n
K 1 4 GHP 4 4 4 GHP GHP M . n
K 1 5 GHP 5 5 5 GHP GHP M . n
K 1 6 OMY 6 6 6 OMY OMY M . n
K 1 7 3FG 7 7 7 3FG 3FG M . n
L 1 1 MLU 1 1 1 MLU MLU O . n
L 1 2 OMZ 2 2 2 OMZ OMZ O . n
L 1 3 ASN 3 3 3 ASN ASN O . n
L 1 4 GHP 4 4 4 GHP GHP O . n
L 1 5 GHP 5 5 5 GHP GHP O . n
L 1 6 OMY 6 6 6 OMY OMY O . n
L 1 7 3FG 7 7 7 3FG 3FG O . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 BGC 1 8 8 BGC BGC A .
N 4 DVC 1 9 9 DVC DVC A .
O 3 BGC 1 8 8 BGC BGC C .
P 4 DVC 1 9 9 DVC DVC C .
Q 3 BGC 1 8 8 BGC BGC E .
R 4 DVC 1 9 9 DVC DVC E .
S 5 CIT 1 20 20 CIT CIT E .
T 3 BGC 1 8 8 BGC BGC G .
U 4 DVC 1 9 9 DVC DVC G .
V 3 BGC 1 8 8 BGC BGC I .
W 4 DVC 1 9 9 DVC DVC I .
X 5 CIT 1 20 20 CIT CIT I .
Y 6 MRD 1 21 21 MRD MRD I .
Z 3 BGC 1 8 8 BGC BGC K .
AA 4 DVC 1 9 9 DVC DVC K .
BA 5 CIT 1 20 20 CIT CIT K .
CA 7 MPD 1 21 21 MPD MPD K .
DA 3 BGC 1 8 8 BGC BGC M .
EA 4 DVC 1 9 9 DVC DVC M .
FA 5 CIT 1 20 20 CIT CIT M .
GA 3 BGC 1 8 8 BGC BGC O .
HA 4 DVC 1 9 9 DVC DVC O .
IA 5 CIT 1 20 20 CIT CIT O .
JA 8 HOH 1 2001 2001 HOH HOH A .
JA 8 HOH 2 2002 2002 HOH HOH A .
JA 8 HOH 3 2003 2003 HOH HOH A .
JA 8 HOH 4 2004 2004 HOH HOH A .
JA 8 HOH 5 2005 2005 HOH HOH A .
JA 8 HOH 6 2006 2006 HOH HOH A .
JA 8 HOH 7 2007 2007 HOH HOH A .
JA 8 HOH 8 2008 2008 HOH HOH A .
JA 8 HOH 9 2009 2009 HOH HOH A .
JA 8 HOH 10 2010 2010 HOH HOH A .
JA 8 HOH 11 2011 2011 HOH HOH A .
JA 8 HOH 12 2012 2012 HOH HOH A .
JA 8 HOH 13 2013 2013 HOH HOH A .
JA 8 HOH 14 2014 2014 HOH HOH A .
JA 8 HOH 15 2015 2015 HOH HOH A .
JA 8 HOH 16 2016 2016 HOH HOH A .
JA 8 HOH 17 2017 2017 HOH HOH A .
JA 8 HOH 18 2018 2018 HOH HOH A .
JA 8 HOH 19 2019 2019 HOH HOH A .
JA 8 HOH 20 2020 2020 HOH HOH A .
JA 8 HOH 21 2021 2021 HOH HOH A .
JA 8 HOH 22 2022 2022 HOH HOH A .
JA 8 HOH 23 2023 2023 HOH HOH A .
JA 8 HOH 24 2024 2024 HOH HOH A .
JA 8 HOH 25 2025 2025 HOH HOH A .
JA 8 HOH 26 2026 2026 HOH HOH A .
JA 8 HOH 27 2027 2027 HOH HOH A .
KA 8 HOH 1 2001 2001 HOH HOH B .
KA 8 HOH 2 2002 2002 HOH HOH B .
KA 8 HOH 3 2003 2003 HOH HOH B .
KA 8 HOH 4 2004 2004 HOH HOH B .
KA 8 HOH 5 2005 2005 HOH HOH B .
KA 8 HOH 6 2006 2006 HOH HOH B .
KA 8 HOH 7 2007 2007 HOH HOH B .
KA 8 HOH 8 2008 2008 HOH HOH B .
KA 8 HOH 9 2009 2009 HOH HOH B .
KA 8 HOH 10 2010 2010 HOH HOH B .
LA 8 HOH 1 2001 2001 HOH HOH C .
LA 8 HOH 2 2002 2002 HOH HOH C .
LA 8 HOH 3 2003 2003 HOH HOH C .
LA 8 HOH 4 2004 2004 HOH HOH C .
LA 8 HOH 5 2005 2005 HOH HOH C .
LA 8 HOH 6 2006 2006 HOH HOH C .
LA 8 HOH 7 2007 2007 HOH HOH C .
LA 8 HOH 8 2008 2008 HOH HOH C .
LA 8 HOH 9 2009 2009 HOH HOH C .
LA 8 HOH 10 2010 2010 HOH HOH C .
LA 8 HOH 11 2011 2011 HOH HOH C .
LA 8 HOH 12 2012 2012 HOH HOH C .
LA 8 HOH 13 2013 2013 HOH HOH C .
LA 8 HOH 14 2014 2014 HOH HOH C .
LA 8 HOH 15 2015 2015 HOH HOH C .
LA 8 HOH 16 2016 2016 HOH HOH C .
LA 8 HOH 17 2017 2017 HOH HOH C .
LA 8 HOH 18 2018 2018 HOH HOH C .
LA 8 HOH 19 2019 2019 HOH HOH C .
LA 8 HOH 20 2020 2020 HOH HOH C .
LA 8 HOH 21 2021 2021 HOH HOH C .
LA 8 HOH 22 2022 2022 HOH HOH C .
MA 8 HOH 1 2001 2001 HOH HOH D .
MA 8 HOH 2 2002 2002 HOH HOH D .
MA 8 HOH 3 2003 2003 HOH HOH D .
MA 8 HOH 4 2004 2004 HOH HOH D .
MA 8 HOH 5 2005 2005 HOH HOH D .
MA 8 HOH 6 2006 2006 HOH HOH D .
MA 8 HOH 7 2007 2007 HOH HOH D .
NA 8 HOH 1 2001 2001 HOH HOH E .
NA 8 HOH 2 2002 2002 HOH HOH E .
NA 8 HOH 3 2003 2003 HOH HOH E .
NA 8 HOH 4 2004 2004 HOH HOH E .
NA 8 HOH 5 2005 2005 HOH HOH E .
NA 8 HOH 6 2006 2006 HOH HOH E .
NA 8 HOH 7 2007 2007 HOH HOH E .
NA 8 HOH 8 2008 2008 HOH HOH E .
NA 8 HOH 9 2009 2009 HOH HOH E .
NA 8 HOH 10 2010 2010 HOH HOH E .
NA 8 HOH 11 2011 2011 HOH HOH E .
NA 8 HOH 12 2012 2012 HOH HOH E .
NA 8 HOH 13 2013 2013 HOH HOH E .
NA 8 HOH 14 2014 2014 HOH HOH E .
NA 8 HOH 15 2015 2015 HOH HOH E .
NA 8 HOH 16 2016 2016 HOH HOH E .
NA 8 HOH 17 2017 2017 HOH HOH E .
NA 8 HOH 18 2018 2018 HOH HOH E .
NA 8 HOH 19 2019 2019 HOH HOH E .
NA 8 HOH 20 2020 2020 HOH HOH E .
NA 8 HOH 21 2021 2021 HOH HOH E .
NA 8 HOH 22 2022 2022 HOH HOH E .
NA 8 HOH 23 2023 2023 HOH HOH E .
NA 8 HOH 24 2024 2024 HOH HOH E .
NA 8 HOH 25 2025 2025 HOH HOH E .
OA 8 HOH 1 2001 2001 HOH HOH F .
OA 8 HOH 2 2002 2002 HOH HOH F .
OA 8 HOH 3 2003 2003 HOH HOH F .
OA 8 HOH 4 2004 2004 HOH HOH F .
OA 8 HOH 5 2005 2005 HOH HOH F .
OA 8 HOH 6 2006 2006 HOH HOH F .
OA 8 HOH 7 2007 2007 HOH HOH F .
OA 8 HOH 8 2008 2008 HOH HOH F .
PA 8 HOH 1 2001 2001 HOH HOH G .
PA 8 HOH 2 2002 2002 HOH HOH G .
PA 8 HOH 3 2003 2003 HOH HOH G .
PA 8 HOH 4 2004 2004 HOH HOH G .
PA 8 HOH 5 2005 2005 HOH HOH G .
PA 8 HOH 6 2006 2006 HOH HOH G .
PA 8 HOH 7 2007 2007 HOH HOH G .
PA 8 HOH 8 2008 2008 HOH HOH G .
PA 8 HOH 9 2009 2009 HOH HOH G .
PA 8 HOH 10 2010 2010 HOH HOH G .
PA 8 HOH 11 2011 2011 HOH HOH G .
PA 8 HOH 12 2012 2012 HOH HOH G .
PA 8 HOH 13 2013 2013 HOH HOH G .
PA 8 HOH 14 2014 2014 HOH HOH G .
PA 8 HOH 15 2015 2015 HOH HOH G .
PA 8 HOH 16 2016 2016 HOH HOH G .
PA 8 HOH 17 2017 2017 HOH HOH G .
PA 8 HOH 18 2018 2018 HOH HOH G .
PA 8 HOH 19 2019 2019 HOH HOH G .
PA 8 HOH 20 2020 2020 HOH HOH G .
PA 8 HOH 21 2021 2021 HOH HOH G .
PA 8 HOH 22 2022 2022 HOH HOH G .
PA 8 HOH 23 2023 2023 HOH HOH G .
PA 8 HOH 24 2024 2024 HOH HOH G .
PA 8 HOH 25 2025 2025 HOH HOH G .
PA 8 HOH 26 2026 2026 HOH HOH G .
QA 8 HOH 1 2001 2001 HOH HOH H .
QA 8 HOH 2 2002 2002 HOH HOH H .
QA 8 HOH 3 2003 2003 HOH HOH H .
QA 8 HOH 4 2004 2004 HOH HOH H .
QA 8 HOH 5 2005 2005 HOH HOH H .
QA 8 HOH 6 2006 2006 HOH HOH H .
RA 8 HOH 1 2001 2001 HOH HOH I .
RA 8 HOH 2 2002 2002 HOH HOH I .
RA 8 HOH 3 2003 2003 HOH HOH I .
RA 8 HOH 4 2004 2004 HOH HOH I .
RA 8 HOH 5 2005 2005 HOH HOH I .
RA 8 HOH 6 2006 2006 HOH HOH I .
RA 8 HOH 7 2007 2007 HOH HOH I .
RA 8 HOH 8 2008 2008 HOH HOH I .
RA 8 HOH 9 2009 2009 HOH HOH I .
RA 8 HOH 10 2010 2010 HOH HOH I .
RA 8 HOH 11 2011 2011 HOH HOH I .
RA 8 HOH 12 2012 2012 HOH HOH I .
RA 8 HOH 13 2013 2013 HOH HOH I .
RA 8 HOH 14 2014 2014 HOH HOH I .
RA 8 HOH 15 2015 2015 HOH HOH I .
RA 8 HOH 16 2016 2016 HOH HOH I .
RA 8 HOH 17 2017 2017 HOH HOH I .
RA 8 HOH 18 2018 2018 HOH HOH I .
RA 8 HOH 19 2019 2019 HOH HOH I .
RA 8 HOH 20 2020 2020 HOH HOH I .
RA 8 HOH 21 2021 2021 HOH HOH I .
RA 8 HOH 22 2022 2022 HOH HOH I .
RA 8 HOH 23 2023 2023 HOH HOH I .
RA 8 HOH 24 2024 2024 HOH HOH I .
RA 8 HOH 25 2025 2025 HOH HOH I .
RA 8 HOH 26 2026 2026 HOH HOH I .
RA 8 HOH 27 2027 2027 HOH HOH I .
SA 8 HOH 1 2001 2001 HOH HOH K .
SA 8 HOH 2 2002 2002 HOH HOH K .
SA 8 HOH 3 2003 2003 HOH HOH K .
SA 8 HOH 4 2004 2004 HOH HOH K .
SA 8 HOH 5 2005 2005 HOH HOH K .
SA 8 HOH 6 2006 2006 HOH HOH K .
SA 8 HOH 7 2007 2007 HOH HOH K .
SA 8 HOH 8 2008 2008 HOH HOH K .
SA 8 HOH 9 2009 2009 HOH HOH K .
SA 8 HOH 10 2010 2010 HOH HOH K .
SA 8 HOH 11 2011 2011 HOH HOH K .
SA 8 HOH 12 2012 2012 HOH HOH K .
SA 8 HOH 13 2013 2013 HOH HOH K .
SA 8 HOH 14 2014 2014 HOH HOH K .
SA 8 HOH 15 2015 2015 HOH HOH K .
SA 8 HOH 16 2016 2016 HOH HOH K .
SA 8 HOH 17 2017 2017 HOH HOH K .
SA 8 HOH 18 2018 2018 HOH HOH K .
SA 8 HOH 19 2019 2019 HOH HOH K .
SA 8 HOH 20 2020 2020 HOH HOH K .
SA 8 HOH 21 2021 2021 HOH HOH K .
SA 8 HOH 22 2022 2022 HOH HOH K .
SA 8 HOH 23 2023 2023 HOH HOH K .
SA 8 HOH 24 2024 2024 HOH HOH K .
SA 8 HOH 25 2025 2025 HOH HOH K .
SA 8 HOH 26 2026 2026 HOH HOH K .
SA 8 HOH 27 2027 2027 HOH HOH K .
SA 8 HOH 28 2028 2028 HOH HOH K .
SA 8 HOH 29 2029 2029 HOH HOH K .
SA 8 HOH 30 2030 2030 HOH HOH K .
SA 8 HOH 31 2031 2031 HOH HOH K .
TA 8 HOH 1 2001 2001 HOH HOH M .
TA 8 HOH 2 2002 2002 HOH HOH M .
TA 8 HOH 3 2003 2003 HOH HOH M .
TA 8 HOH 4 2004 2004 HOH HOH M .
TA 8 HOH 5 2005 2005 HOH HOH M .
TA 8 HOH 6 2006 2006 HOH HOH M .
TA 8 HOH 7 2007 2007 HOH HOH M .
TA 8 HOH 8 2008 2008 HOH HOH M .
TA 8 HOH 9 2009 2009 HOH HOH M .
TA 8 HOH 10 2010 2010 HOH HOH M .
TA 8 HOH 11 2011 2011 HOH HOH M .
TA 8 HOH 12 2012 2012 HOH HOH M .
TA 8 HOH 13 2013 2013 HOH HOH M .
TA 8 HOH 14 2014 2014 HOH HOH M .
TA 8 HOH 15 2015 2015 HOH HOH M .
TA 8 HOH 16 2016 2016 HOH HOH M .
TA 8 HOH 17 2017 2017 HOH HOH M .
TA 8 HOH 18 2018 2018 HOH HOH M .
TA 8 HOH 19 2019 2019 HOH HOH M .
TA 8 HOH 20 2020 2020 HOH HOH M .
TA 8 HOH 21 2021 2021 HOH HOH M .
TA 8 HOH 22 2022 2022 HOH HOH M .
TA 8 HOH 23 2023 2023 HOH HOH M .
TA 8 HOH 24 2024 2024 HOH HOH M .
TA 8 HOH 25 2025 2025 HOH HOH M .
TA 8 HOH 26 2026 2026 HOH HOH M .
TA 8 HOH 27 2027 2027 HOH HOH M .
TA 8 HOH 28 2028 2028 HOH HOH M .
TA 8 HOH 29 2029 2029 HOH HOH M .
TA 8 HOH 30 2030 2030 HOH HOH M .
TA 8 HOH 31 2031 2031 HOH HOH M .
TA 8 HOH 32 2032 2032 HOH HOH M .
UA 8 HOH 1 2001 2001 HOH HOH O .
UA 8 HOH 2 2002 2002 HOH HOH O .
UA 8 HOH 3 2003 2003 HOH HOH O .
UA 8 HOH 4 2004 2004 HOH HOH O .
UA 8 HOH 5 2005 2005 HOH HOH O .
UA 8 HOH 6 2006 2006 HOH HOH O .
UA 8 HOH 7 2007 2007 HOH HOH O .
UA 8 HOH 8 2008 2008 HOH HOH O .
UA 8 HOH 9 2009 2009 HOH HOH O .
UA 8 HOH 10 2010 2010 HOH HOH O .
UA 8 HOH 11 2011 2011 HOH HOH O .
UA 8 HOH 12 2012 2012 HOH HOH O .
UA 8 HOH 13 2013 2013 HOH HOH O .
UA 8 HOH 14 2014 2014 HOH HOH O .
UA 8 HOH 15 2015 2015 HOH HOH O .
UA 8 HOH 16 2016 2016 HOH HOH O .
UA 8 HOH 17 2017 2017 HOH HOH O .
UA 8 HOH 18 2018 2018 HOH HOH O .
UA 8 HOH 19 2019 2019 HOH HOH O .
UA 8 HOH 20 2020 2020 HOH HOH O .
UA 8 HOH 21 2021 2021 HOH HOH O .
UA 8 HOH 22 2022 2022 HOH HOH O .
UA 8 HOH 23 2023 2023 HOH HOH O .
UA 8 HOH 24 2024 2024 HOH HOH O .
UA 8 HOH 25 2025 2025 HOH HOH O .
UA 8 HOH 26 2026 2026 HOH HOH O .
UA 8 HOH 27 2027 2027 HOH HOH O .
UA 8 HOH 28 2028 2028 HOH HOH O .
UA 8 HOH 29 2029 2029 HOH HOH O .
UA 8 HOH 30 2030 2030 HOH HOH O .
UA 8 HOH 31 2031 2031 HOH HOH O .
UA 8 HOH 32 2032 2032 HOH HOH O .
UA 8 HOH 33 2033 2033 HOH HOH O .
UA 8 HOH 34 2034 2034 HOH HOH O .
UA 8 HOH 35 2035 2035 HOH HOH O .
UA 8 HOH 36 2036 2036 HOH HOH O .
UA 8 HOH 37 2037 2037 HOH HOH O .
UA 8 HOH 38 2038 2038 HOH HOH O .
#
_pdbx_molecule_features.prd_id PRD_000484
_pdbx_molecule_features.name Balhimycin
_pdbx_molecule_features.type Glycopeptide
_pdbx_molecule_features.class 'Antibiotic, Antimicrobial'
_pdbx_molecule_features.details
;BALHIMYCIN IS A TRICYCLIC HEPTAPEPTIDE
GLYCOSYLATED BY D-GLUCOSE (RESIDUE 8) ON
RESIDUE 4 AND BY 4-OXO-VANCOSAMINE
(RESIDUE 9) ON RESIDUE 6.
;
#
loop_
_pdbx_molecule.instance_id
_pdbx_molecule.prd_id
_pdbx_molecule.asym_id
1 PRD_000484 A
1 PRD_000484 M
1 PRD_000484 N
2 PRD_000484 C
2 PRD_000484 O
2 PRD_000484 P
3 PRD_000484 E
3 PRD_000484 Q
3 PRD_000484 R
4 PRD_000484 G
4 PRD_000484 T
4 PRD_000484 U
5 PRD_000484 I
5 PRD_000484 V
5 PRD_000484 W
6 PRD_000484 J
6 PRD_000484 Z
6 PRD_000484 AA
7 PRD_000484 K
7 PRD_000484 DA
7 PRD_000484 EA
8 PRD_000484 L
8 PRD_000484 GA
8 PRD_000484 HA
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A OMY 6 A OMY 6 ? TYR ?
2 C OMY 6 C OMY 6 ? TYR ?
3 E OMY 6 E OMY 6 ? TYR ?
4 G OMY 6 G OMY 6 ? TYR ?
5 I OMY 6 I OMY 6 ? TYR ?
6 J OMY 6 K OMY 6 ? TYR ?
7 K OMY 6 M OMY 6 ? TYR ?
8 L OMY 6 O OMY 6 ? TYR ?
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 software_defined_assembly PISA hexameric 6
2 software_defined_assembly PISA dimeric 2
3 software_defined_assembly PISA tetrameric 4
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,C,D,I,J,M,N,O,P,V,W,X,Y,Z,AA,BA,CA,JA,KA,LA,MA,RA,SA
2 1 K,L,DA,EA,FA,GA,HA,IA,TA,UA
3 1 E,F,G,H,Q,R,S,T,U,NA,OA,PA,QA
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 5490 ?
1 MORE -42.4 ?
1 'SSA (A^2)' 6660 ?
2 'ABSA (A^2)' 1770 ?
2 MORE -3.3 ?
2 'SSA (A^2)' 2110 ?
3 'ABSA (A^2)' 1430 ?
3 MORE -9.2 ?
3 'SSA (A^2)' 3080 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2002-06-13
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2012-07-25
4 'Structure model' 1 3 2012-11-30
5 'Structure model' 1 4 2013-02-27
6 'Structure model' 1 5 2013-03-20
7 'Structure model' 1 6 2017-02-08
8 'Structure model' 2 0 2019-04-24
9 'Structure model' 2 1 2019-05-22
10 'Structure model' 2 2 2019-07-10
11 'Structure model' 2 3 2019-07-24
12 'Structure model' 2 4 2020-07-29
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 12 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Database references'
3 2 'Structure model' 'Derived calculations'
4 2 'Structure model' 'Structure summary'
5 2 'Structure model' 'Version format compliance'
6 3 'Structure model' 'Atomic model'
7 3 'Structure model' 'Non-polymer description'
8 3 'Structure model' Other
9 4 'Structure model' Other
10 5 'Structure model' 'Derived calculations'
11 6 'Structure model' 'Derived calculations'
12 7 'Structure model' 'Source and taxonomy'
13 8 'Structure model' 'Data collection'
14 8 'Structure model' 'Derived calculations'
15 8 'Structure model' Other
16 8 'Structure model' 'Polymer sequence'
17 9 'Structure model' 'Data collection'
18 9 'Structure model' 'Refinement description'
19 10 'Structure model' 'Data collection'
20 11 'Structure model' 'Data collection'
21 12 'Structure model' 'Data collection'
22 12 'Structure model' 'Derived calculations'
23 12 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 8 'Structure model' diffrn_source
2 8 'Structure model' entity_poly
3 8 'Structure model' pdbx_database_proc
4 8 'Structure model' pdbx_database_status
5 8 'Structure model' pdbx_seq_map_depositor_info
6 8 'Structure model' struct_conn
7 9 'Structure model' refine
8 10 'Structure model' diffrn_source
9 11 'Structure model' diffrn_source
10 12 'Structure model' chem_comp
11 12 'Structure model' entity
12 12 'Structure model' pdbx_chem_comp_identifier
13 12 'Structure model' pdbx_entity_nonpoly
14 12 'Structure model' struct_conn
15 12 'Structure model' struct_site
16 12 'Structure model' struct_site_gen
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 8 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
2 8 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
3 8 'Structure model' '_pdbx_database_status.recvd_author_approval'
4 8 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code'
5 8 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
6 9 'Structure model' '_refine.pdbx_ls_cross_valid_method'
7 10 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
8 11 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
9 12 'Structure model' '_chem_comp.name'
10 12 'Structure model' '_chem_comp.type'
11 12 'Structure model' '_entity.pdbx_description'
12 12 'Structure model' '_pdbx_entity_nonpoly.name'
13 12 'Structure model' '_struct_conn.pdbx_dist_value'
14 12 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
15 12 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id'
16 12 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id'
17 12 'Structure model' '_struct_conn.ptnr1_label_atom_id'
18 12 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
19 12 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
20 12 'Structure model' '_struct_conn.ptnr2_label_asym_id'
21 12 'Structure model' '_struct_conn.ptnr2_label_atom_id'
22 12 'Structure model' '_struct_conn.ptnr2_label_comp_id'
23 12 'Structure model' '_struct_conn.ptnr2_label_seq_id'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
SHELXL-97 refinement . ? 1
DENZO 'data reduction' . ? 2
SCALEPACK 'data scaling' . ? 3
SHELXD phasing . ? 4
#
_pdbx_entry_details.entry_id 1GO6
_pdbx_entry_details.compound_details
;BALHIMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS
A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS
FURTHER GLYCOSYLATED BY TWO MONOSACCHARIDES: A D-GLUCOSE
AND A 4-OXO-VANCOSAMINE.
HERE, BALHIMYCIN IS REPRESENTED GROUPING TOGETHER THE
SEQUENCE (SEQRES) AND TWO LIGANDS (HET) DVC AND BGC
GROUP: 1
NAME: BALHIMYCIN
CHAIN: A, C, E, G, I, K, M, O
COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 7
COMPONENT_2: SUGAR RESIDUES 8 AND 9
DESCRIPTION: BALHIMYCIN IS A TRICYCLIC HEPTAPEPTIDE
GLYCOSYLATED BY D-GLUCOSE (RESIDUE 8) ON
RESIDUE 4 AND BY 4-OXO-VANCOSAMINE
(RESIDUE 9) ON RESIDUE 6.
;
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASN G 3 ? ? -123.27 -51.73
2 1 ASN O 3 ? ? -105.61 -60.33
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 N 1 E CIT 20 ? C4 ? S CIT 1 C4
2 1 N 1 E CIT 20 ? C5 ? S CIT 1 C5
3 1 N 1 E CIT 20 ? O3 ? S CIT 1 O3
4 1 N 1 E CIT 20 ? O4 ? S CIT 1 O4
5 1 N 1 K CIT 20 ? C4 ? BA CIT 1 C4
6 1 N 1 K CIT 20 ? C5 ? BA CIT 1 C5
7 1 N 1 K CIT 20 ? O3 ? BA CIT 1 O3
8 1 N 1 K CIT 20 ? O4 ? BA CIT 1 O4
9 1 N 1 K CIT 20 ? C6 ? BA CIT 1 C6
10 1 N 1 K CIT 20 ? O5 ? BA CIT 1 O5
11 1 N 1 K CIT 20 ? O6 ? BA CIT 1 O6
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb
BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose
BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp
BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 beta-D-glucopyranose BGC
4 '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' DVC
5 'CITRIC ACID' CIT
6 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD
7 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD
8 water HOH
#