HEADER OXIDOREDUCTASE 26-OCT-01 1GOS TITLE HUMAN MONOAMINE OXIDASE B COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOAMINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MONOAMINE OXIDASE TYPE B, MAOB; COMPND 5 EC: 1.4.3.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS OXIDOREDUCTASE, FAD-CONTAINING AMINE OXIDASE EXPDTA X-RAY DIFFRACTION AUTHOR C.BINDA,P.NEWTON-VINSON,F.HUBALEK,D.E.EDMONDSON,A.MATTEVI REVDAT 3 13-NOV-24 1GOS 1 REMARK LINK REVDAT 2 24-FEB-09 1GOS 1 VERSN REVDAT 1 29-NOV-01 1GOS 0 JRNL AUTH C.BINDA,P.NEWTON-VINSON,F.HUBALEK,D.E.EDMONDSON,A.MATTEVI JRNL TITL STRUCTURE OF HUMAN MONOAMINE OXIDASE B, A DRUG TARGET FOR JRNL TITL 2 THE TREATMENT OF NEUROLOGICAL DISORDERS JRNL REF NAT.STRUCT.BIOL. V. 9 22 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11753429 JRNL DOI 10.1038/NSB732 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 24034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 982 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7890 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GOS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1290008762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24034 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIR REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 112.15000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 112.15000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 112.15000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 112.15000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ILE A 501 REMARK 465 PHE A 502 REMARK 465 SER A 503 REMARK 465 ALA A 504 REMARK 465 THR A 505 REMARK 465 ALA A 506 REMARK 465 LEU A 507 REMARK 465 GLY A 508 REMARK 465 PHE A 509 REMARK 465 LEU A 510 REMARK 465 ALA A 511 REMARK 465 HIS A 512 REMARK 465 LYS A 513 REMARK 465 ARG A 514 REMARK 465 GLY A 515 REMARK 465 LEU A 516 REMARK 465 LEU A 517 REMARK 465 VAL A 518 REMARK 465 ARG A 519 REMARK 465 VAL A 520 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 GLY B 497 REMARK 465 LEU B 498 REMARK 465 THR B 499 REMARK 465 THR B 500 REMARK 465 ILE B 501 REMARK 465 PHE B 502 REMARK 465 SER B 503 REMARK 465 ALA B 504 REMARK 465 THR B 505 REMARK 465 ALA B 506 REMARK 465 LEU B 507 REMARK 465 GLY B 508 REMARK 465 PHE B 509 REMARK 465 LEU B 510 REMARK 465 ALA B 511 REMARK 465 HIS B 512 REMARK 465 LYS B 513 REMARK 465 ARG B 514 REMARK 465 GLY B 515 REMARK 465 LEU B 516 REMARK 465 LEU B 517 REMARK 465 VAL B 518 REMARK 465 ARG B 519 REMARK 465 VAL B 520 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 233 OE2 GLU A 253 1.96 REMARK 500 N ARG A 67 OE2 GLU A 437 1.98 REMARK 500 O GLU B 243 NH1 ARG B 420 2.01 REMARK 500 OE1 GLU B 253 OH TYR B 255 2.02 REMARK 500 N ARG B 67 OE2 GLU B 437 2.03 REMARK 500 NH2 ARG B 70 OE2 GLU B 444 2.07 REMARK 500 OG1 THR B 400 OE1 GLU B 427 2.10 REMARK 500 OE1 GLU A 34 O3B FAD A 600 2.12 REMARK 500 O GLU A 243 NH1 ARG A 420 2.13 REMARK 500 NZ LYS A 209 OD1 ASP A 330 2.17 REMARK 500 NH2 ARG B 47 OE1 GLU B 219 2.17 REMARK 500 OD2 ASP A 55 OG SER A 59 2.18 REMARK 500 OE1 GLU B 34 O3B FAD B 600 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 37 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 VAL A 54 CB - CA - C ANGL. DEV. = -15.0 DEGREES REMARK 500 THR A 64 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 ASP A 114 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 132 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 144 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 330 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 CYS A 397 N - CA - C ANGL. DEV. = 16.6 DEGREES REMARK 500 ASP A 419 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 471 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP B 37 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 VAL B 54 CB - CA - C ANGL. DEV. = -12.0 DEGREES REMARK 500 ASP B 123 CB - CG - OD2 ANGL. DEV. = 9.6 DEGREES REMARK 500 ASP B 144 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP B 223 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 310 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 LEU B 375 CA - CB - CG ANGL. DEV. = -15.6 DEGREES REMARK 500 TYR B 398 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP B 471 CB - CG - OD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP B 471 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 5 -144.78 -158.02 REMARK 500 ASP A 25 -9.75 -53.48 REMARK 500 VAL A 39 -13.33 -148.35 REMARK 500 ARG A 42 40.34 -78.01 REMARK 500 ASN A 48 144.89 176.77 REMARK 500 LYS A 52 -71.21 77.38 REMARK 500 VAL A 61 144.93 -171.83 REMARK 500 GLN A 65 72.88 -107.15 REMARK 500 GLU A 86 -169.79 -64.47 REMARK 500 THR A 111 -30.16 -154.51 REMARK 500 ARG A 127 -5.57 -52.49 REMARK 500 ASP A 132 -49.78 -23.48 REMARK 500 ALA A 133 86.11 -166.01 REMARK 500 THR A 195 -72.17 -38.38 REMARK 500 ASN A 203 31.05 -87.74 REMARK 500 GLN A 206 35.52 -96.22 REMARK 500 ARG A 228 -18.50 -47.17 REMARK 500 ARG A 242 -140.99 -87.07 REMARK 500 GLU A 243 -65.35 -101.38 REMARK 500 HIS A 252 51.94 86.76 REMARK 500 THR A 267 -36.61 -39.55 REMARK 500 PRO A 276 -179.15 -68.00 REMARK 500 ILE A 286 -8.53 -42.87 REMARK 500 PRO A 304 68.69 -68.57 REMARK 500 GLU A 321 -2.13 -51.82 REMARK 500 ASN A 336 -82.18 -71.93 REMARK 500 ALA A 346 -130.69 38.21 REMARK 500 CYS A 365 -76.95 -45.01 REMARK 500 SER A 374 99.26 -172.05 REMARK 500 HIS A 382 139.50 173.28 REMARK 500 CYS A 389 -30.62 -29.21 REMARK 500 SER A 394 -44.89 -131.43 REMARK 500 TYR A 398 -87.04 47.94 REMARK 500 THR A 399 -151.81 -137.50 REMARK 500 PRO A 404 -62.87 -23.01 REMARK 500 THR A 408 -41.40 -29.46 REMARK 500 ARG A 412 27.13 -71.35 REMARK 500 ASP A 419 -91.86 53.35 REMARK 500 ALA A 424 -149.79 -98.26 REMARK 500 GLU A 427 2.54 -59.32 REMARK 500 ALA A 429 -159.96 -73.46 REMARK 500 THR A 430 -29.40 -148.19 REMARK 500 ALA A 439 -36.97 -38.49 REMARK 500 ALA A 442 -76.83 -55.28 REMARK 500 ALA A 446 -82.94 -37.46 REMARK 500 ILE A 457 148.33 -179.47 REMARK 500 PHE A 481 -55.74 -25.84 REMARK 500 ILE A 496 98.95 -45.54 REMARK 500 CYS B 5 -147.99 -160.78 REMARK 500 VAL B 39 -9.72 -145.95 REMARK 500 REMARK 500 THIS ENTRY HAS 94 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 397 TYR A 398 -139.91 REMARK 500 GLY A 405 ILE A 406 -141.75 REMARK 500 CYS B 397 TYR B 398 -138.42 REMARK 500 GLY B 405 ILE B 406 -141.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NYP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NYP B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H8R RELATED DB: PDB REMARK 900 HUMAN MONOAMINE OXIDASE TYPE B (TRUNCATED) DBREF 1GOS A 1 1 PDB 1GOS 1GOS 1 1 DBREF 1GOS A 2 520 UNP P27338 AOFB_HUMAN 1 519 DBREF 1GOS B 1 1 PDB 1GOS 1GOS 1 1 DBREF 1GOS B 2 520 UNP P27338 AOFB_HUMAN 1 519 SEQRES 1 A 520 MET SER ASN LYS CYS ASP VAL VAL VAL VAL GLY GLY GLY SEQRES 2 A 520 ILE SER GLY MET ALA ALA ALA LYS LEU LEU HIS ASP SER SEQRES 3 A 520 GLY LEU ASN VAL VAL VAL LEU GLU ALA ARG ASP ARG VAL SEQRES 4 A 520 GLY GLY ARG THR TYR THR LEU ARG ASN GLN LYS VAL LYS SEQRES 5 A 520 TYR VAL ASP LEU GLY GLY SER TYR VAL GLY PRO THR GLN SEQRES 6 A 520 ASN ARG ILE LEU ARG LEU ALA LYS GLU LEU GLY LEU GLU SEQRES 7 A 520 THR TYR LYS VAL ASN GLU VAL GLU ARG LEU ILE HIS HIS SEQRES 8 A 520 VAL LYS GLY LYS SER TYR PRO PHE ARG GLY PRO PHE PRO SEQRES 9 A 520 PRO VAL TRP ASN PRO ILE THR TYR LEU ASP HIS ASN ASN SEQRES 10 A 520 PHE TRP ARG THR MET ASP ASP MET GLY ARG GLU ILE PRO SEQRES 11 A 520 SER ASP ALA PRO TRP LYS ALA PRO LEU ALA GLU GLU TRP SEQRES 12 A 520 ASP ASN MET THR MET LYS GLU LEU LEU ASP LYS LEU CYS SEQRES 13 A 520 TRP THR GLU SER ALA LYS GLN LEU ALA THR LEU PHE VAL SEQRES 14 A 520 ASN LEU CYS VAL THR ALA GLU THR HIS GLU VAL SER ALA SEQRES 15 A 520 LEU TRP PHE LEU TRP TYR VAL LYS GLN CYS GLY GLY THR SEQRES 16 A 520 THR ARG ILE ILE SER THR THR ASN GLY GLY GLN GLU ARG SEQRES 17 A 520 LYS PHE VAL GLY GLY SER GLY GLN VAL SER GLU ARG ILE SEQRES 18 A 520 MET ASP LEU LEU GLY ASP ARG VAL LYS LEU GLU ARG PRO SEQRES 19 A 520 VAL ILE TYR ILE ASP GLN THR ARG GLU ASN VAL LEU VAL SEQRES 20 A 520 GLU THR LEU ASN HIS GLU MET TYR GLU ALA LYS TYR VAL SEQRES 21 A 520 ILE SER ALA ILE PRO PRO THR LEU GLY MET LYS ILE HIS SEQRES 22 A 520 PHE ASN PRO PRO LEU PRO MET MET ARG ASN GLN MET ILE SEQRES 23 A 520 THR ARG VAL PRO LEU GLY SER VAL ILE LYS CYS ILE VAL SEQRES 24 A 520 TYR TYR LYS GLU PRO PHE TRP ARG LYS LYS ASP TYR CYS SEQRES 25 A 520 GLY THR MET ILE ILE ASP GLY GLU GLU ALA PRO VAL ALA SEQRES 26 A 520 TYR THR LEU ASP ASP THR LYS PRO GLU GLY ASN TYR ALA SEQRES 27 A 520 ALA ILE MET GLY PHE ILE LEU ALA HIS LYS ALA ARG LYS SEQRES 28 A 520 LEU ALA ARG LEU THR LYS GLU GLU ARG LEU LYS LYS LEU SEQRES 29 A 520 CYS GLU LEU TYR ALA LYS VAL LEU GLY SER LEU GLU ALA SEQRES 30 A 520 LEU GLU PRO VAL HIS TYR GLU GLU LYS ASN TRP CYS GLU SEQRES 31 A 520 GLU GLN TYR SER GLY GLY CYS TYR THR THR TYR PHE PRO SEQRES 32 A 520 PRO GLY ILE LEU THR GLN TYR GLY ARG VAL LEU ARG GLN SEQRES 33 A 520 PRO VAL ASP ARG ILE TYR PHE ALA GLY THR GLU THR ALA SEQRES 34 A 520 THR HIS TRP SER GLY TYR MET GLU GLY ALA VAL GLU ALA SEQRES 35 A 520 GLY GLU ARG ALA ALA ARG GLU ILE LEU HIS ALA MET GLY SEQRES 36 A 520 LYS ILE PRO GLU ASP GLU ILE TRP GLN SER GLU PRO GLU SEQRES 37 A 520 SER VAL ASP VAL PRO ALA GLN PRO ILE THR THR THR PHE SEQRES 38 A 520 LEU GLU ARG HIS LEU PRO SER VAL PRO GLY LEU LEU ARG SEQRES 39 A 520 LEU ILE GLY LEU THR THR ILE PHE SER ALA THR ALA LEU SEQRES 40 A 520 GLY PHE LEU ALA HIS LYS ARG GLY LEU LEU VAL ARG VAL SEQRES 1 B 520 MET SER ASN LYS CYS ASP VAL VAL VAL VAL GLY GLY GLY SEQRES 2 B 520 ILE SER GLY MET ALA ALA ALA LYS LEU LEU HIS ASP SER SEQRES 3 B 520 GLY LEU ASN VAL VAL VAL LEU GLU ALA ARG ASP ARG VAL SEQRES 4 B 520 GLY GLY ARG THR TYR THR LEU ARG ASN GLN LYS VAL LYS SEQRES 5 B 520 TYR VAL ASP LEU GLY GLY SER TYR VAL GLY PRO THR GLN SEQRES 6 B 520 ASN ARG ILE LEU ARG LEU ALA LYS GLU LEU GLY LEU GLU SEQRES 7 B 520 THR TYR LYS VAL ASN GLU VAL GLU ARG LEU ILE HIS HIS SEQRES 8 B 520 VAL LYS GLY LYS SER TYR PRO PHE ARG GLY PRO PHE PRO SEQRES 9 B 520 PRO VAL TRP ASN PRO ILE THR TYR LEU ASP HIS ASN ASN SEQRES 10 B 520 PHE TRP ARG THR MET ASP ASP MET GLY ARG GLU ILE PRO SEQRES 11 B 520 SER ASP ALA PRO TRP LYS ALA PRO LEU ALA GLU GLU TRP SEQRES 12 B 520 ASP ASN MET THR MET LYS GLU LEU LEU ASP LYS LEU CYS SEQRES 13 B 520 TRP THR GLU SER ALA LYS GLN LEU ALA THR LEU PHE VAL SEQRES 14 B 520 ASN LEU CYS VAL THR ALA GLU THR HIS GLU VAL SER ALA SEQRES 15 B 520 LEU TRP PHE LEU TRP TYR VAL LYS GLN CYS GLY GLY THR SEQRES 16 B 520 THR ARG ILE ILE SER THR THR ASN GLY GLY GLN GLU ARG SEQRES 17 B 520 LYS PHE VAL GLY GLY SER GLY GLN VAL SER GLU ARG ILE SEQRES 18 B 520 MET ASP LEU LEU GLY ASP ARG VAL LYS LEU GLU ARG PRO SEQRES 19 B 520 VAL ILE TYR ILE ASP GLN THR ARG GLU ASN VAL LEU VAL SEQRES 20 B 520 GLU THR LEU ASN HIS GLU MET TYR GLU ALA LYS TYR VAL SEQRES 21 B 520 ILE SER ALA ILE PRO PRO THR LEU GLY MET LYS ILE HIS SEQRES 22 B 520 PHE ASN PRO PRO LEU PRO MET MET ARG ASN GLN MET ILE SEQRES 23 B 520 THR ARG VAL PRO LEU GLY SER VAL ILE LYS CYS ILE VAL SEQRES 24 B 520 TYR TYR LYS GLU PRO PHE TRP ARG LYS LYS ASP TYR CYS SEQRES 25 B 520 GLY THR MET ILE ILE ASP GLY GLU GLU ALA PRO VAL ALA SEQRES 26 B 520 TYR THR LEU ASP ASP THR LYS PRO GLU GLY ASN TYR ALA SEQRES 27 B 520 ALA ILE MET GLY PHE ILE LEU ALA HIS LYS ALA ARG LYS SEQRES 28 B 520 LEU ALA ARG LEU THR LYS GLU GLU ARG LEU LYS LYS LEU SEQRES 29 B 520 CYS GLU LEU TYR ALA LYS VAL LEU GLY SER LEU GLU ALA SEQRES 30 B 520 LEU GLU PRO VAL HIS TYR GLU GLU LYS ASN TRP CYS GLU SEQRES 31 B 520 GLU GLN TYR SER GLY GLY CYS TYR THR THR TYR PHE PRO SEQRES 32 B 520 PRO GLY ILE LEU THR GLN TYR GLY ARG VAL LEU ARG GLN SEQRES 33 B 520 PRO VAL ASP ARG ILE TYR PHE ALA GLY THR GLU THR ALA SEQRES 34 B 520 THR HIS TRP SER GLY TYR MET GLU GLY ALA VAL GLU ALA SEQRES 35 B 520 GLY GLU ARG ALA ALA ARG GLU ILE LEU HIS ALA MET GLY SEQRES 36 B 520 LYS ILE PRO GLU ASP GLU ILE TRP GLN SER GLU PRO GLU SEQRES 37 B 520 SER VAL ASP VAL PRO ALA GLN PRO ILE THR THR THR PHE SEQRES 38 B 520 LEU GLU ARG HIS LEU PRO SER VAL PRO GLY LEU LEU ARG SEQRES 39 B 520 LEU ILE GLY LEU THR THR ILE PHE SER ALA THR ALA LEU SEQRES 40 B 520 GLY PHE LEU ALA HIS LYS ARG GLY LEU LEU VAL ARG VAL HET FAD A 600 53 HET NYP A 601 12 HET FAD B 600 53 HET NYP B 601 12 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NYP N-[(E)-METHYL](PHENYL)-N-[(E)-2- HETNAM 2 NYP PROPENYLIDENE]METHANAMINIUM FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 NYP 2(C11 H18 N 1+) HELIX 1 1 GLY A 13 ASP A 25 1 13 HELIX 2 2 GLN A 65 LEU A 75 1 11 HELIX 3 3 ASN A 108 MET A 125 1 18 HELIX 4 4 ALA A 133 ALA A 137 5 5 HELIX 5 5 LEU A 139 ASN A 145 1 7 HELIX 6 6 THR A 147 CYS A 156 1 10 HELIX 7 7 THR A 158 VAL A 173 1 16 HELIX 8 8 GLU A 176 VAL A 180 5 5 HELIX 9 9 SER A 181 CYS A 192 1 12 HELIX 10 10 GLY A 193 SER A 200 1 8 HELIX 11 11 GLY A 213 LEU A 225 1 13 HELIX 12 12 PRO A 265 ILE A 272 5 8 HELIX 13 13 PRO A 279 ILE A 286 1 8 HELIX 14 14 PRO A 304 LYS A 309 5 6 HELIX 15 15 ALA A 346 ARG A 354 1 9 HELIX 16 16 THR A 356 GLY A 373 1 18 HELIX 17 17 SER A 374 GLU A 379 5 6 HELIX 18 18 CYS A 389 GLU A 391 5 3 HELIX 19 19 ILE A 406 GLY A 411 1 6 HELIX 20 20 ARG A 412 LEU A 414 5 3 HELIX 21 21 GLY A 425 ALA A 429 5 5 HELIX 22 22 TYR A 435 GLY A 455 1 21 HELIX 23 23 PRO A 458 ILE A 462 5 5 HELIX 24 24 SER A 488 ILE A 496 1 9 HELIX 25 25 GLY B 13 ASP B 25 1 13 HELIX 26 26 GLN B 65 LEU B 75 1 11 HELIX 27 27 ASN B 108 ARG B 127 1 20 HELIX 28 28 ALA B 133 ALA B 137 5 5 HELIX 29 29 LEU B 139 ASN B 145 1 7 HELIX 30 30 THR B 147 CYS B 156 1 10 HELIX 31 31 THR B 158 VAL B 173 1 16 HELIX 32 32 GLU B 176 VAL B 180 5 5 HELIX 33 33 SER B 181 GLN B 191 1 11 HELIX 34 34 GLY B 193 SER B 200 1 8 HELIX 35 35 SER B 214 LEU B 225 1 12 HELIX 36 36 PRO B 265 ILE B 272 5 8 HELIX 37 37 PRO B 279 ILE B 286 1 8 HELIX 38 38 PRO B 304 LYS B 309 5 6 HELIX 39 39 ALA B 346 ARG B 354 1 9 HELIX 40 40 THR B 356 GLY B 373 1 18 HELIX 41 41 SER B 374 GLU B 379 5 6 HELIX 42 42 CYS B 389 GLU B 391 5 3 HELIX 43 43 ILE B 406 GLY B 411 1 6 HELIX 44 44 ARG B 412 LEU B 414 5 3 HELIX 45 45 GLY B 425 ALA B 429 5 5 HELIX 46 46 TYR B 435 GLY B 455 1 21 HELIX 47 47 PRO B 458 ILE B 462 5 5 HELIX 48 48 THR B 480 LEU B 486 1 7 HELIX 49 49 SER B 488 ILE B 496 1 9 SHEET 1 AA 5 VAL A 229 LYS A 230 0 SHEET 2 AA 5 VAL A 30 LEU A 33 1 O VAL A 32 N LYS A 230 SHEET 3 AA 5 VAL A 7 VAL A 9 1 O VAL A 7 N VAL A 31 SHEET 4 AA 5 VAL A 260 SER A 262 1 N ILE A 261 O VAL A 8 SHEET 5 AA 5 ILE A 421 PHE A 423 1 O TYR A 422 N SER A 262 SHEET 1 AB 2 THR A 45 ASN A 48 0 SHEET 2 AB 2 LYS A 52 ASP A 55 -1 O LYS A 52 N ASN A 48 SHEET 1 AC 2 THR A 79 LYS A 81 0 SHEET 2 AC 2 ARG A 208 PHE A 210 -1 O LYS A 209 N TYR A 80 SHEET 1 AD 7 LYS A 95 PHE A 99 0 SHEET 2 AD 7 ARG A 87 VAL A 92 -1 O LEU A 88 N PHE A 99 SHEET 3 AD 7 TYR A 311 ILE A 317 1 N CYS A 312 O ARG A 87 SHEET 4 AD 7 TYR A 326 ASP A 329 -1 O THR A 327 N MET A 315 SHEET 5 AD 7 ALA A 339 LEU A 345 -1 O MET A 341 N LEU A 328 SHEET 6 AD 7 VAL A 294 TYR A 300 -1 O ILE A 295 N ILE A 344 SHEET 7 AD 7 HIS A 382 ASN A 387 -1 O HIS A 382 N TYR A 300 SHEET 1 AE 4 MET A 254 ALA A 257 0 SHEET 2 AE 4 VAL A 245 THR A 249 -1 O VAL A 245 N ALA A 257 SHEET 3 AE 4 VAL A 235 ASP A 239 -1 N ILE A 236 O GLU A 248 SHEET 4 AE 4 HIS A 273 ASN A 275 1 O HIS A 273 N ILE A 238 SHEET 1 BA 5 VAL B 229 LYS B 230 0 SHEET 2 BA 5 VAL B 30 LEU B 33 1 O VAL B 32 N LYS B 230 SHEET 3 BA 5 VAL B 7 VAL B 9 1 O VAL B 7 N VAL B 31 SHEET 4 BA 5 VAL B 260 SER B 262 1 N ILE B 261 O VAL B 8 SHEET 5 BA 5 ILE B 421 PHE B 423 1 O TYR B 422 N SER B 262 SHEET 1 BB 2 THR B 45 ASN B 48 0 SHEET 2 BB 2 LYS B 52 ASP B 55 -1 O LYS B 52 N ASN B 48 SHEET 1 BC 2 THR B 79 LYS B 81 0 SHEET 2 BC 2 ARG B 208 PHE B 210 -1 O LYS B 209 N TYR B 80 SHEET 1 BD 7 LYS B 95 PHE B 99 0 SHEET 2 BD 7 ARG B 87 VAL B 92 -1 O LEU B 88 N PHE B 99 SHEET 3 BD 7 TYR B 311 ILE B 317 1 N CYS B 312 O ARG B 87 SHEET 4 BD 7 TYR B 326 ASP B 329 -1 O THR B 327 N MET B 315 SHEET 5 BD 7 ALA B 339 LEU B 345 -1 O MET B 341 N LEU B 328 SHEET 6 BD 7 VAL B 294 TYR B 300 -1 O ILE B 295 N ILE B 344 SHEET 7 BD 7 HIS B 382 ASN B 387 -1 O HIS B 382 N TYR B 300 SHEET 1 BE 4 MET B 254 ALA B 257 0 SHEET 2 BE 4 VAL B 245 THR B 249 -1 O VAL B 245 N ALA B 257 SHEET 3 BE 4 VAL B 235 ASP B 239 -1 N ILE B 236 O GLU B 248 SHEET 4 BE 4 HIS B 273 ASN B 275 1 O HIS B 273 N ILE B 238 LINK SG CYS A 397 C8M FAD A 600 1555 1555 1.83 LINK N5 FAD A 600 C11 NYP A 601 1555 1555 1.43 LINK SG CYS B 397 C8M FAD B 600 1555 1555 1.66 LINK N5 FAD B 600 C11 NYP B 601 1555 1555 1.43 CISPEP 1 ASN A 275 PRO A 276 0 3.63 CISPEP 2 ASN B 275 PRO B 276 0 4.60 SITE 1 AC1 26 VAL A 10 GLY A 11 GLY A 12 GLY A 13 SITE 2 AC1 26 ILE A 14 SER A 15 GLU A 34 ARG A 36 SITE 3 AC1 26 GLY A 41 ARG A 42 GLY A 57 GLY A 58 SITE 4 AC1 26 SER A 59 TYR A 60 VAL A 235 ILE A 264 SITE 5 AC1 26 TYR A 393 CYS A 397 TYR A 398 GLY A 425 SITE 6 AC1 26 THR A 426 GLY A 434 TYR A 435 MET A 436 SITE 7 AC1 26 ALA A 439 NYP A 601 SITE 1 AC2 5 LEU A 171 CYS A 172 GLN A 206 TYR A 398 SITE 2 AC2 5 FAD A 600 SITE 1 AC3 28 VAL B 10 GLY B 11 GLY B 12 GLY B 13 SITE 2 AC3 28 ILE B 14 SER B 15 GLU B 34 ALA B 35 SITE 3 AC3 28 ARG B 36 GLY B 41 ARG B 42 GLY B 57 SITE 4 AC3 28 GLY B 58 SER B 59 TYR B 60 VAL B 235 SITE 5 AC3 28 ILE B 264 TRP B 388 TYR B 393 CYS B 397 SITE 6 AC3 28 TYR B 398 GLY B 425 THR B 426 GLY B 434 SITE 7 AC3 28 TYR B 435 MET B 436 ALA B 439 NYP B 601 SITE 1 AC4 5 LEU B 171 CYS B 172 GLN B 206 TYR B 398 SITE 2 AC4 5 FAD B 600 CRYST1 138.800 224.300 87.200 90.00 90.00 90.00 C 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004458 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011468 0.00000 MTRIX1 1 -0.557530 -0.488230 -0.671420 141.66000 1 MTRIX2 1 -0.494030 -0.454850 0.740980 205.59000 1 MTRIX3 1 -0.667160 0.744810 0.012390 -57.25000 1