data_1GQ0 # _entry.id 1GQ0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GQ0 PDBE EBI-5778 WWPDB D_1290005778 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1JOH unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I' PDB 1EE7 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES' PDB 1AMT unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL ALAMETHICIN' PDB 1M24 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL TRICHOTOXIN_A50E' PDB 1OB4 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL A' PDB 1OB6 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL B' PDB 1OB7 unspecified 'CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL C' PDB 1R9U unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN METHANOL' PDB 1IH9 unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB BOUND TO DPC MICELLES' PDB 1DLZ unspecified 'SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN ISOTROPIC SOLVENTS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GQ0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2001-11-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Galbraith, T.P.' 1 ? 'Harris, R.' 2 ? 'Driscoll, P.C.' 3 ? 'Wallace, B.A.' 4 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Solution NMR studies of antiamoebin, a membrane channel-forming polypeptide.' 'Biophys. J.' 84 185 194 2003 BIOJAU US 0006-3495 0030 ? 12524274 '10.1016/S0006-3495(03)74841-3' 1 'The structure and function of antiamoebin I, a proline-rich membrane-active polypeptide.' Structure 6 783 792 1998 STRUE6 UK 0969-2126 2005 ? 9655831 '10.1016/S0969-2126(98)00079-3' 2 'Antiamoebin can function as a carrier or as a pore-forming peptaibol.' 'Biochim. Biophys. Acta' 1415 255 260 1998 BBACAQ NE 0006-3002 0113 ? 9858744 '10.1016/S0005-2736(98)00184-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Galbraith, T.P.' 1 primary 'Harris, R.' 2 primary 'Driscoll, P.C.' 3 primary 'Wallace, B.A.' 4 1 'Snook, C.F.' 5 1 'Woolley, G.A.' 6 1 'Oliva, G.' 7 1 'Pattabhi, V.' 8 1 'Wood, S.F.' 9 1 'Blundell, T.L.' 10 1 'Wallace, B.A.' 11 2 'Duclohier, H.' 12 2 'Snook, C.F.' 13 2 'Wallace, B.A.' 14 # _cell.entry_id 1GQ0 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GQ0 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'ANTIAMOEBIN I' _entity.formula_weight 1654.991 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)F(AIB)(AIB)(AIB)(DIV)GL(AIB)(AIB)(HYP)Q(DIV)(HYP)(AIB)P(PHL)' _entity_poly.pdbx_seq_one_letter_code_can XFAAAVGLAAPQVPAPF _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 PHE n 1 3 AIB n 1 4 AIB n 1 5 AIB n 1 6 DIV n 1 7 GLY n 1 8 LEU n 1 9 AIB n 1 10 AIB n 1 11 HYP n 1 12 GLN n 1 13 DIV n 1 14 HYP n 1 15 AIB n 1 16 PRO n 1 17 PHL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'EMERICELLOPSIS SP. 2723' _entity_src_nat.pdbx_ncbi_taxonomy_id 489044 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00945 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00945 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1GQ0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 17 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession NOR00945 _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 16 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 DIV 'D-peptide linking' . D-ISOVALINE ? 'C5 H11 N O2' 117.146 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PHL 'L-peptide linking' n L-PHENYLALANINOL ? 'C9 H13 N O' 151.206 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 ROESY 1 3 1 DQF-COSY 1 4 1 TOCSY 1 5 1 HSQC 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K _pdbx_nmr_exptl_sample_conditions.label ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model UNITYPLUS _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1GQ0 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;246 ATOMS USED IN SIMULATED ANNEALING (INCLUDING HYDROGENS) RMSD VALUES FROM IDEAL GEOMETRY FOR 20 MODELS: BOND DISTANCES 0.013 ANGSTROMS, STANDARD DEVIATION 0.0001 BOND ANGLES 2.92 DEGREES, STANDARD DEVIATION 0.017 IMPROPER ANGLES 6.62 DEGREES, STANDARD DEVIATION 0.028 ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1GQ0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY' # _pdbx_nmr_representative.entry_id 1GQ0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.1 BRUNGER 1 'structure solution' MARDIGRAS ? ? 2 'structure solution' XPLOR ? ? 3 # _exptl.entry_id 1GQ0 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1GQ0 _struct.title 'Solution structure of Antiamoebin I, a membrane channel-forming polypeptide; NMR, 20 structures' _struct.pdbx_descriptor 'ANTIAMOEBIN I' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GQ0 _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'ANTIAMOEBIN I, PEPTAIBOL, ANTIBACTERIAL, ANTIFUNGAL, ANTIBIOTIC' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 AIB A 4 ? AIB A 9 ? AIB A 3 AIB A 8 1 ? 6 HELX_P HELX_P2 2 AIB A 10 ? DIV A 13 ? AIB A 9 DIV A 12 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ACE 1 C ? ? ? 1_555 A PHE 2 N ? ? A ACE 0 A PHE 1 1_555 ? ? ? ? ? ? ? 1.347 ? covale2 covale ? ? A PHE 2 C ? ? ? 1_555 A AIB 3 N ? ? A PHE 1 A AIB 2 1_555 ? ? ? ? ? ? ? 1.351 ? covale3 covale ? ? A AIB 3 C ? ? ? 1_555 A AIB 4 N ? ? A AIB 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.368 ? covale4 covale ? ? A AIB 4 C ? ? ? 1_555 A AIB 5 N ? ? A AIB 3 A AIB 4 1_555 ? ? ? ? ? ? ? 1.374 ? covale5 covale ? ? A AIB 5 C ? ? ? 1_555 A DIV 6 N ? ? A AIB 4 A DIV 5 1_555 ? ? ? ? ? ? ? 1.372 ? covale6 covale ? ? A DIV 6 C ? ? ? 1_555 A GLY 7 N ? ? A DIV 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.348 ? covale7 covale ? ? A LEU 8 C ? ? ? 1_555 A AIB 9 N ? ? A LEU 7 A AIB 8 1_555 ? ? ? ? ? ? ? 1.350 ? covale8 covale ? ? A AIB 9 C ? ? ? 1_555 A AIB 10 N ? ? A AIB 8 A AIB 9 1_555 ? ? ? ? ? ? ? 1.371 ? covale9 covale ? ? A AIB 10 C ? ? ? 1_555 A HYP 11 N ? ? A AIB 9 A HYP 10 1_555 ? ? ? ? ? ? ? 1.367 ? covale10 covale ? ? A HYP 11 C ? ? ? 1_555 A GLN 12 N ? ? A HYP 10 A GLN 11 1_555 ? ? ? ? ? ? ? 1.326 ? covale11 covale ? ? A GLN 12 C ? ? ? 1_555 A DIV 13 N ? ? A GLN 11 A DIV 12 1_555 ? ? ? ? ? ? ? 1.353 ? covale12 covale ? ? A DIV 13 C ? ? ? 1_555 A HYP 14 N ? ? A DIV 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.384 ? covale13 covale ? ? A HYP 14 C ? ? ? 1_555 A AIB 15 N ? ? A HYP 13 A AIB 14 1_555 ? ? ? ? ? ? ? 1.365 ? covale14 covale ? ? A AIB 15 C ? ? ? 1_555 A PRO 16 N ? ? A AIB 14 A PRO 15 1_555 ? ? ? ? ? ? ? 1.368 ? covale15 covale ? ? A PRO 16 C ? ? ? 1_555 A PHL 17 N ? ? A PRO 15 A PHL 16 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1GQ0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GQ0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _database_PDB_caveat.text 'HYP A 13 C-ALPHA WRONG HAND IN ALL MODELS, PHL A 16 C-ALPHA WRONG HAND IN ALL MODELS' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 PHE 2 1 1 PHE PHE A . n A 1 3 AIB 3 2 2 AIB AIB A . n A 1 4 AIB 4 3 3 AIB AIB A . n A 1 5 AIB 5 4 4 AIB AIB A . n A 1 6 DIV 6 5 5 DIV DIV A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 AIB 9 8 8 AIB AIB A . n A 1 10 AIB 10 9 9 AIB AIB A . n A 1 11 HYP 11 10 10 HYP HYP A . n A 1 12 GLN 12 11 11 GLN GLN A . n A 1 13 DIV 13 12 12 DIV DIV A . n A 1 14 HYP 14 13 13 HYP HYP A . n A 1 15 AIB 15 14 14 AIB AIB A . n A 1 16 PRO 16 15 15 PRO PRO A . n A 1 17 PHL 17 16 16 PHL PHL A . n # _pdbx_molecule_features.prd_id PRD_000161 _pdbx_molecule_features.name 'Antiamoebin 1' _pdbx_molecule_features.type Peptaibol _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;ANTIAMOEBIN I IS A HEXADECAMERIC HELICAL PEPTIDE. THE N-TERM IS ACETYLATED (RESIDUE 0) ; # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000161 _pdbx_molecule.asym_id A # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A AIB 3 A AIB 2 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 2 A AIB 4 A AIB 3 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 3 A AIB 5 A AIB 4 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 4 A AIB 9 A AIB 8 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 5 A AIB 10 A AIB 9 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 6 A HYP 11 A HYP 10 ? PRO 4-HYDROXYPROLINE 7 A HYP 14 A HYP 13 ? PRO 4-HYDROXYPROLINE 8 A AIB 15 A AIB 14 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 9 A PHL 17 A PHL 16 ? PHE L-PHENYLALANINOL # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-01-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-11-30 4 'Structure model' 1 3 2017-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 2 'Structure model' 'Version format compliance' 6 3 'Structure model' Other 7 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.pdbx_database_id_DOI' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_citation_author.name' # _pdbx_entry_details.entry_id 1GQ0 _pdbx_entry_details.compound_details ;ANTIAMOEBIN I IS LINEAR PEPTIDE, A MEMBER OF THE PEPTAIBOL FAMILY OF MEMBRANE CHANNEL FORMING PEPTIDES. HERE, ANTIAMOEBIN I IS REPRESENTED BY THE SEQUENCE (SEQRES) GROUP: 1 NAME: ANTIAMOEBIN I CHAIN: A COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 0 TO 16 DESCRIPTION: ANTIAMOEBIN I IS A HEXADECAMERIC HELICAL PEPTIDE. THE N-TERM IS ACETYLATED (RESIDUE 0) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE ANTIBIOTIC REPORTED HERE IS SIMILAR IN STRUCTURE TO THAT FOUND IN EMBL:AAB11467 FROM THE SPECIES ACREMONIUM TUBAKII ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A HYP 13 ? ? H A PHL 16 ? ? 1.52 2 3 O A HYP 13 ? ? H A PHL 16 ? ? 1.53 3 4 O A HYP 13 ? ? H A PHL 16 ? ? 1.57 4 5 O A GLY 6 ? ? H A AIB 9 ? ? 1.58 5 6 O A HYP 13 ? ? H A PHL 16 ? ? 1.51 6 6 O A GLY 6 ? ? H A AIB 9 ? ? 1.59 7 7 O A HYP 13 ? ? H A PHL 16 ? ? 1.52 8 8 O A HYP 13 ? ? H A PHL 16 ? ? 1.51 9 8 O A GLY 6 ? ? H A AIB 9 ? ? 1.52 10 9 O A HYP 13 ? ? H A PHL 16 ? ? 1.50 11 9 O A GLY 6 ? ? H A AIB 9 ? ? 1.56 12 13 O A HYP 13 ? ? H A PHL 16 ? ? 1.50 13 13 O A GLY 6 ? ? H A AIB 9 ? ? 1.57 14 14 O A GLY 6 ? ? H A AIB 9 ? ? 1.52 15 15 O A HYP 13 ? ? H A PHL 16 ? ? 1.53 16 16 O A GLY 6 ? ? H A AIB 9 ? ? 1.50 17 16 O A HYP 13 ? ? H A PHL 16 ? ? 1.50 18 18 O A HYP 13 ? ? H A PHL 16 ? ? 1.53 19 18 O A GLY 6 ? ? H A AIB 9 ? ? 1.56 20 19 O A GLY 6 ? ? H A AIB 9 ? ? 1.51 21 20 O A AIB 8 ? ? H A DIV 12 ? ? 1.49 22 20 O A HYP 13 ? ? H A PHL 16 ? ? 1.52 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 AIB A 2 ? ? -65.05 56.39 2 1 AIB A 3 ? ? -176.90 -33.54 3 1 AIB A 4 ? ? -8.73 73.91 4 1 DIV A 5 ? ? 27.51 65.98 5 1 LEU A 7 ? ? 22.77 45.84 6 1 AIB A 8 ? ? 159.42 -23.24 7 1 DIV A 12 ? ? -38.84 -37.20 8 1 HYP A 13 ? ? -4.54 -59.22 9 1 AIB A 14 ? ? -35.94 -79.87 10 2 AIB A 3 ? ? 164.94 -23.25 11 2 AIB A 4 ? ? -7.81 86.26 12 2 DIV A 5 ? ? 29.42 66.04 13 2 LEU A 7 ? ? 33.17 79.51 14 2 HYP A 13 ? ? -2.61 -62.92 15 2 AIB A 14 ? ? 14.75 -79.86 16 2 PRO A 15 ? ? -38.93 -34.85 17 3 AIB A 2 ? ? -65.43 58.72 18 3 AIB A 3 ? ? 178.45 -27.29 19 3 AIB A 4 ? ? -21.75 85.92 20 3 LEU A 7 ? ? 32.33 86.46 21 3 DIV A 12 ? ? -35.99 -38.36 22 3 HYP A 13 ? ? -4.21 -58.12 23 3 AIB A 14 ? ? -0.68 -67.18 24 3 PRO A 15 ? ? -38.73 -35.66 25 4 AIB A 2 ? ? -64.32 64.85 26 4 AIB A 3 ? ? 143.46 -7.78 27 4 AIB A 4 ? ? -24.77 84.69 28 4 DIV A 5 ? ? 29.61 60.07 29 4 LEU A 7 ? ? 35.81 65.41 30 4 HYP A 10 ? ? -86.07 35.78 31 4 DIV A 12 ? ? -38.59 -60.90 32 4 HYP A 13 ? ? 18.97 -66.14 33 4 AIB A 14 ? ? -23.00 -58.74 34 4 PRO A 15 ? ? -39.53 -35.83 35 5 AIB A 2 ? ? -61.52 68.65 36 5 AIB A 3 ? ? 172.60 -26.50 37 5 AIB A 4 ? ? -21.95 83.79 38 5 LEU A 7 ? ? 34.81 51.02 39 5 DIV A 12 ? ? -31.40 -35.01 40 5 HYP A 13 ? ? -0.51 -61.34 41 5 AIB A 14 ? ? 6.63 -72.47 42 5 PRO A 15 ? ? -33.76 -33.91 43 6 AIB A 2 ? ? -62.11 68.22 44 6 AIB A 3 ? ? -175.20 -33.10 45 6 AIB A 4 ? ? -24.40 89.72 46 6 DIV A 5 ? ? 35.55 70.21 47 6 LEU A 7 ? ? 36.49 58.31 48 6 AIB A 8 ? ? 40.83 29.92 49 6 DIV A 12 ? ? -38.06 -44.68 50 6 HYP A 13 ? ? 4.73 -63.65 51 6 AIB A 14 ? ? -7.85 -64.18 52 6 PRO A 15 ? ? -39.18 -35.14 53 7 AIB A 2 ? ? -65.66 59.20 54 7 AIB A 3 ? ? -171.04 -33.75 55 7 AIB A 4 ? ? -25.90 87.50 56 7 LEU A 7 ? ? 31.81 69.86 57 7 DIV A 12 ? ? -37.91 -40.50 58 7 HYP A 13 ? ? -0.47 -63.39 59 7 AIB A 14 ? ? 9.31 -76.25 60 7 PRO A 15 ? ? -37.08 -31.55 61 8 AIB A 2 ? ? -66.78 64.52 62 8 AIB A 3 ? ? -171.59 -33.67 63 8 AIB A 4 ? ? -24.71 87.30 64 8 LEU A 7 ? ? 39.25 34.37 65 8 AIB A 8 ? ? 75.80 -2.02 66 8 DIV A 12 ? ? -39.43 -45.99 67 8 HYP A 13 ? ? -1.28 -63.06 68 8 AIB A 14 ? ? 11.53 -79.93 69 8 PRO A 15 ? ? -36.50 -30.18 70 9 AIB A 2 ? ? -63.50 63.32 71 9 AIB A 3 ? ? 164.00 -23.90 72 9 AIB A 4 ? ? -25.07 88.30 73 9 LEU A 7 ? ? 37.98 47.69 74 9 AIB A 8 ? ? 47.00 28.32 75 9 HYP A 13 ? ? 11.30 -64.18 76 9 AIB A 14 ? ? -15.28 -58.09 77 10 AIB A 2 ? ? -65.48 55.47 78 10 AIB A 3 ? ? -169.17 -33.72 79 10 AIB A 4 ? ? -26.10 92.94 80 10 LEU A 7 ? ? 35.56 68.75 81 10 AIB A 8 ? ? 46.37 22.87 82 10 DIV A 12 ? ? -34.05 -39.45 83 10 HYP A 13 ? ? -6.75 -57.21 84 10 AIB A 14 ? ? -42.82 -78.79 85 10 PRO A 15 ? ? -38.94 -30.81 86 11 AIB A 2 ? ? -64.22 59.46 87 11 AIB A 3 ? ? -178.64 -28.08 88 11 AIB A 4 ? ? -23.02 88.07 89 11 HYP A 10 ? ? -86.24 33.94 90 11 HYP A 13 ? ? -3.47 -60.69 91 11 AIB A 14 ? ? 13.30 -77.75 92 11 PRO A 15 ? ? -33.81 -31.77 93 12 AIB A 2 ? ? -66.45 61.71 94 12 AIB A 3 ? ? 156.61 -22.02 95 12 AIB A 4 ? ? -14.86 78.56 96 12 LEU A 7 ? ? 21.02 60.78 97 12 AIB A 8 ? ? 148.25 -35.92 98 12 AIB A 9 ? ? -32.60 -35.87 99 12 HYP A 13 ? ? 2.64 -57.15 100 12 AIB A 14 ? ? -18.33 -80.25 101 12 PRO A 15 ? ? -30.99 -37.41 102 13 AIB A 2 ? ? -66.25 56.53 103 13 AIB A 3 ? ? -177.20 -30.50 104 13 AIB A 4 ? ? -15.16 81.05 105 13 LEU A 7 ? ? 31.35 71.93 106 13 AIB A 8 ? ? 82.87 -18.82 107 13 AIB A 9 ? ? -27.41 -38.44 108 13 HYP A 10 ? ? -81.11 37.39 109 13 DIV A 12 ? ? -38.10 -42.96 110 13 HYP A 13 ? ? -5.39 -59.72 111 13 AIB A 14 ? ? 2.75 -80.41 112 13 PRO A 15 ? ? -33.05 -32.70 113 14 AIB A 2 ? ? -66.36 63.33 114 14 AIB A 3 ? ? 160.42 -25.46 115 14 AIB A 4 ? ? -31.71 84.61 116 14 LEU A 7 ? ? 37.50 44.63 117 14 AIB A 8 ? ? 48.09 27.35 118 14 HYP A 10 ? ? -84.84 30.62 119 14 HYP A 13 ? ? -16.61 -50.50 120 14 AIB A 14 ? ? 17.34 -79.43 121 14 PRO A 15 ? ? -37.33 -27.41 122 15 AIB A 2 ? ? -63.01 65.17 123 15 AIB A 3 ? ? -162.28 -34.59 124 15 AIB A 4 ? ? -20.13 90.35 125 15 DIV A 5 ? ? 38.81 70.26 126 15 LEU A 7 ? ? 32.23 70.67 127 15 DIV A 12 ? ? -38.39 -41.37 128 15 HYP A 13 ? ? -2.88 -61.24 129 15 AIB A 14 ? ? 14.27 -80.33 130 15 PRO A 15 ? ? -37.84 -33.71 131 16 AIB A 2 ? ? -67.28 64.11 132 16 AIB A 3 ? ? 167.90 -24.23 133 16 AIB A 4 ? ? -21.40 83.35 134 16 LEU A 7 ? ? 34.99 37.99 135 16 AIB A 8 ? ? 58.01 18.42 136 16 DIV A 12 ? ? -29.57 -51.11 137 16 HYP A 13 ? ? 6.82 -68.75 138 16 AIB A 14 ? ? 4.19 -73.57 139 16 PRO A 15 ? ? -37.49 -28.48 140 17 AIB A 2 ? ? -61.01 68.84 141 17 AIB A 3 ? ? -170.64 -28.80 142 17 AIB A 4 ? ? -18.47 87.20 143 17 HYP A 10 ? ? -81.25 31.73 144 17 HYP A 13 ? ? -4.56 -56.85 145 17 AIB A 14 ? ? -36.18 -77.87 146 17 PRO A 15 ? ? -36.55 -30.63 147 18 AIB A 2 ? ? -65.32 59.07 148 18 AIB A 3 ? ? 164.20 -24.22 149 18 AIB A 4 ? ? -29.19 91.61 150 18 LEU A 7 ? ? 45.83 28.40 151 18 AIB A 8 ? ? 81.64 15.48 152 18 DIV A 12 ? ? -32.60 -44.57 153 18 HYP A 13 ? ? 4.65 -63.61 154 18 AIB A 14 ? ? -9.94 -67.38 155 19 AIB A 2 ? ? -65.37 60.63 156 19 AIB A 3 ? ? 146.56 -17.46 157 19 AIB A 4 ? ? -35.21 85.92 158 19 LEU A 7 ? ? 36.62 35.69 159 19 DIV A 12 ? ? -34.87 -45.81 160 19 HYP A 13 ? ? -8.69 -56.14 161 19 AIB A 14 ? ? -38.53 -80.65 162 19 PRO A 15 ? ? -37.25 -29.00 163 20 AIB A 2 ? ? -62.81 63.96 164 20 AIB A 3 ? ? -158.91 -36.35 165 20 AIB A 4 ? ? -24.71 84.98 166 20 LEU A 7 ? ? 36.93 58.56 167 20 DIV A 12 ? ? -37.25 -41.82 168 20 HYP A 13 ? ? 0.87 -61.57 169 20 AIB A 14 ? ? -6.23 -69.00 170 20 PRO A 15 ? ? -38.17 -36.64 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? A HYP 13 ? 'WRONG HAND' . 2 1 CA ? A PHL 16 ? 'WRONG HAND' . 3 2 CA ? A HYP 13 ? 'WRONG HAND' . 4 2 CA ? A PHL 16 ? 'WRONG HAND' . 5 3 CA ? A HYP 13 ? 'WRONG HAND' . 6 3 CA ? A PHL 16 ? 'WRONG HAND' . 7 4 CA ? A HYP 13 ? 'WRONG HAND' . 8 4 CA ? A PHL 16 ? 'WRONG HAND' . 9 5 CA ? A HYP 13 ? 'WRONG HAND' . 10 5 CA ? A PHL 16 ? 'WRONG HAND' . 11 6 CA ? A HYP 13 ? 'WRONG HAND' . 12 6 CA ? A PHL 16 ? 'WRONG HAND' . 13 7 CA ? A HYP 13 ? 'WRONG HAND' . 14 7 CA ? A PHL 16 ? 'WRONG HAND' . 15 8 CA ? A HYP 13 ? 'WRONG HAND' . 16 8 CA ? A PHL 16 ? 'WRONG HAND' . 17 9 CA ? A HYP 13 ? 'WRONG HAND' . 18 9 CA ? A PHL 16 ? 'WRONG HAND' . 19 10 CA ? A HYP 13 ? 'WRONG HAND' . 20 10 CA ? A PHL 16 ? 'WRONG HAND' . 21 11 CA ? A HYP 13 ? 'WRONG HAND' . 22 11 CA ? A PHL 16 ? 'WRONG HAND' . 23 12 CA ? A HYP 13 ? 'WRONG HAND' . 24 12 CA ? A PHL 16 ? 'WRONG HAND' . 25 13 CA ? A HYP 13 ? 'WRONG HAND' . 26 13 CA ? A PHL 16 ? 'WRONG HAND' . 27 14 CA ? A HYP 13 ? 'WRONG HAND' . 28 14 CA ? A PHL 16 ? 'WRONG HAND' . 29 15 CA ? A HYP 13 ? 'WRONG HAND' . 30 15 CA ? A PHL 16 ? 'WRONG HAND' . 31 16 CA ? A HYP 13 ? 'WRONG HAND' . 32 16 CA ? A PHL 16 ? 'WRONG HAND' . 33 17 CA ? A HYP 13 ? 'WRONG HAND' . 34 17 CA ? A PHL 16 ? 'WRONG HAND' . 35 18 CA ? A HYP 13 ? 'WRONG HAND' . 36 18 CA ? A PHL 16 ? 'WRONG HAND' . 37 19 CA ? A HYP 13 ? 'WRONG HAND' . 38 19 CA ? A PHL 16 ? 'WRONG HAND' . 39 20 CA ? A HYP 13 ? 'WRONG HAND' . 40 20 CA ? A PHL 16 ? 'WRONG HAND' . #