data_1GV2 # _entry.id 1GV2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GV2 PDBE EBI-9405 WWPDB D_1290009405 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1GUU unspecified 'CRYSTAL STRUCTURE OF C-MYB R1' PDB 1GV5 unspecified 'CRYSTAL STRUCTURE OF C-MYB R2' PDB 1H88 unspecified 'CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1' PDB 1H89 unspecified 'CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2' PDB 1IDY unspecified 'STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZEDAVERAGE STRUCTURE' PDB 1IDZ unspecified 'STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES' PDB 1MBE unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 1' PDB 1MBF unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 1' PDB 1MBG unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 2' PDB 1MBH unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 2' PDB 1MBJ unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 3' PDB 1MBK unspecified 'MOUSE C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN REPEAT 3' PDB 1MSE unspecified 'C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN COMPLEXED WITH DEOXYRIBONUCLEIC ACID (NMR, MINIMIZED AVERAGE STRUCTURE)' PDB 1MSF unspecified 'C-MYB DEOXYRIBONUCLEIC ACID-BINDING DOMAIN COMPLEXED WITH DEOXYRIBONUCLEIC ACID (NMR, 25 STRUCTURES)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GV2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2002-02-05 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tahirov, T.H.' 1 'Ogata, K.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter' 'Cell (Cambridge,Mass.)' 108 57 ? 2002 CELLB5 US 0092-8674 0998 ? 11792321 '10.1016/S0092-8674(01)00636-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tahirov, T.H.' 1 primary 'Morii, H.' 2 primary 'Uedaira, H.' 3 primary 'Sasaki, M.' 4 primary 'Sarai, A.' 5 primary 'Adachi, S.' 6 primary 'Park, S.Y.' 7 primary 'Kamiya, N.' 8 primary 'Ogata, K.' 9 1 'Tahirov, T.H.' 10 1 'Sato, K.' 11 1 'Ichikawa-Iwata, E.' 12 1 'Sasaki, M.' 13 1 'Inoue-Bungo, T.' 14 1 'Shiina, M.' 15 1 'Kimura, K.' 16 1 'Takata, S.' 17 1 'Fujikawa, A.' 18 1 'Morii, H.' 19 1 'Kumasaka, T.' 20 1 'Yamamoto, M.' 21 1 'Ishii, S.' 22 1 'Ogata, K.' 23 # _cell.entry_id 1GV2 _cell.length_a 38.722 _cell.length_b 28.250 _cell.length_c 44.129 _cell.angle_alpha 90.00 _cell.angle_beta 90.87 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GV2 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'MYB PROTO-ONCOGENE PROTEIN' 12674.693 1 ? ? 'R2R3, RESIDUES 89-193' ? 2 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 3 water nat water 18.015 60 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name C-MYB # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAE IAKLLPGRTDNAIKNHWNSTMRRKV ; _entity_poly.pdbx_seq_one_letter_code_can ;ELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAE IAKLLPGRTDNAIKNHWNSTMRRKV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 LEU n 1 3 ILE n 1 4 LYS n 1 5 GLY n 1 6 PRO n 1 7 TRP n 1 8 THR n 1 9 LYS n 1 10 GLU n 1 11 GLU n 1 12 ASP n 1 13 GLN n 1 14 ARG n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LEU n 1 19 VAL n 1 20 GLN n 1 21 LYS n 1 22 TYR n 1 23 GLY n 1 24 PRO n 1 25 LYS n 1 26 ARG n 1 27 TRP n 1 28 SER n 1 29 VAL n 1 30 ILE n 1 31 ALA n 1 32 LYS n 1 33 HIS n 1 34 LEU n 1 35 LYS n 1 36 GLY n 1 37 ARG n 1 38 ILE n 1 39 GLY n 1 40 LYS n 1 41 GLN n 1 42 CYS n 1 43 ARG n 1 44 GLU n 1 45 ARG n 1 46 TRP n 1 47 HIS n 1 48 ASN n 1 49 HIS n 1 50 LEU n 1 51 ASN n 1 52 PRO n 1 53 GLU n 1 54 VAL n 1 55 LYS n 1 56 LYS n 1 57 THR n 1 58 SER n 1 59 TRP n 1 60 THR n 1 61 GLU n 1 62 GLU n 1 63 GLU n 1 64 ASP n 1 65 ARG n 1 66 ILE n 1 67 ILE n 1 68 TYR n 1 69 GLN n 1 70 ALA n 1 71 HIS n 1 72 LYS n 1 73 ARG n 1 74 LEU n 1 75 GLY n 1 76 ASN n 1 77 ARG n 1 78 TRP n 1 79 ALA n 1 80 GLU n 1 81 ILE n 1 82 ALA n 1 83 LYS n 1 84 LEU n 1 85 LEU n 1 86 PRO n 1 87 GLY n 1 88 ARG n 1 89 THR n 1 90 ASP n 1 91 ASN n 1 92 ALA n 1 93 ILE n 1 94 LYS n 1 95 ASN n 1 96 HIS n 1 97 TRP n 1 98 ASN n 1 99 SER n 1 100 THR n 1 101 MET n 1 102 ARG n 1 103 ARG n 1 104 LYS n 1 105 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name MOUSE _entity_src_nat.pdbx_organism_scientific 'MUS MUSCULUS' _entity_src_nat.pdbx_ncbi_taxonomy_id 10090 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'BL21(DE3)' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MYB_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P06876 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1GV2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06876 _struct_ref_seq.db_align_beg 89 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 193 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 89 _struct_ref_seq.pdbx_auth_seq_align_end 193 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1GV2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 35.40 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.80 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;1.6-1.7 M SODIUM CITRATE PH 6.8, PROTEIN CONCENTRATION 15 MG/ML, CRYSTAL WAS GROWN BY REPEATED MACROSEEDING, TRANSFORMED TO LOW HUMIDITY FORM AND FLASH COOLED, 1-2% V/V OF GLYCEROL WAS ADDED TO SODIUM CITRATE TO PREVENT THE CRYSTAL CRACKING DURING THE FLASH COOLING ; # _diffrn.id 1 _diffrn.ambient_temp 293.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1998-05-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.7 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength 0.7 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1GV2 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.680 _reflns.number_obs 11033 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.10000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.6010 _reflns.B_iso_Wilson_estimate 13.4 _reflns.pdbx_redundancy 4.244 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.68 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs 0.44600 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.904 _reflns_shell.pdbx_redundancy 3.53 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1GV2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11022 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 87837.03 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.12 _refine.ls_d_res_high 1.68 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.210 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 570 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 18.3 _refine.aniso_B[1][1] 1.60 _refine.aniso_B[2][2] 0.17 _refine.aniso_B[3][3] -1.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.64 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.357663 _refine.solvent_model_param_bsol 51.1365 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRIES 1MBG AND 1MBJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1GV2 _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 50.00 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.21 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 867 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 60 _refine_hist.number_atoms_total 929 _refine_hist.d_res_high 1.68 _refine_hist.d_res_low 44.12 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.80 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.74 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.50 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.21 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.92 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.68 _refine_ls_shell.d_res_low 1.79 _refine_ls_shell.number_reflns_R_work 1702 _refine_ls_shell.R_factor_R_work 0.310 _refine_ls_shell.percent_reflns_obs 96.9 _refine_ls_shell.R_factor_R_free 0.264 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP # _struct.entry_id 1GV2 _struct.title 'CRYSTAL STRUCTURE OF C-MYB R2R3' _struct.pdbx_descriptor 'MYB PROTO-ONCOGENE PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GV2 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, MYB, C-MYB, DNA BINDING, ION BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? GLY A 23 ? THR A 96 GLY A 111 1 ? 16 HELX_P HELX_P2 2 ARG A 26 ? LYS A 32 ? ARG A 114 LYS A 120 1 ? 7 HELX_P HELX_P3 3 ILE A 38 ? HIS A 49 ? ILE A 126 HIS A 137 1 ? 12 HELX_P HELX_P4 4 THR A 60 ? GLY A 75 ? THR A 148 GLY A 163 1 ? 16 HELX_P HELX_P5 5 ARG A 77 ? LYS A 83 ? ARG A 165 LYS A 171 1 ? 7 HELX_P HELX_P6 6 THR A 89 ? MET A 101 ? THR A 177 MET A 189 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B NA . NA ? ? ? 1_555 A LEU 85 O ? ? A NA 1191 A LEU 173 1_555 ? ? ? ? ? ? ? 2.337 ? metalc2 metalc ? ? B NA . NA ? ? ? 1_555 A ARG 88 O ? ? A NA 1191 A ARG 176 1_555 ? ? ? ? ? ? ? 2.446 ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 A ASN 48 OD1 ? ? A NA 1191 A ASN 136 1_555 ? ? ? ? ? ? ? 2.453 ? metalc4 metalc ? ? B NA . NA ? ? ? 1_555 A ALA 82 O ? ? A NA 1191 A ALA 170 1_555 ? ? ? ? ? ? ? 2.391 ? metalc5 metalc ? ? B NA . NA ? ? ? 1_555 D HOH . O ? ? A NA 1191 A HOH 2052 1_555 ? ? ? ? ? ? ? 2.392 ? metalc6 metalc ? ? C NA . NA ? ? ? 1_555 A ALA 31 O ? ? A NA 1192 A ALA 119 1_555 ? ? ? ? ? ? ? 2.303 ? metalc7 metalc ? ? C NA . NA ? ? ? 1_555 A ARG 37 O ? ? A NA 1192 A ARG 125 1_555 ? ? ? ? ? ? ? 2.372 ? metalc8 metalc ? ? C NA . NA ? ? ? 1_555 A LEU 34 O ? ? A NA 1192 A LEU 122 1_555 ? ? ? ? ? ? ? 2.397 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A1191' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NA A1192' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASN A 48 ? ASN A 136 . ? 1_555 ? 2 AC1 6 ALA A 82 ? ALA A 170 . ? 1_555 ? 3 AC1 6 LEU A 85 ? LEU A 173 . ? 1_555 ? 4 AC1 6 ARG A 88 ? ARG A 176 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 2051 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 2052 . ? 1_555 ? 7 AC2 5 ALA A 31 ? ALA A 119 . ? 1_555 ? 8 AC2 5 LEU A 34 ? LEU A 122 . ? 1_555 ? 9 AC2 5 ARG A 37 ? ARG A 125 . ? 1_555 ? 10 AC2 5 HOH D . ? HOH A 2016 . ? 1_555 ? 11 AC2 5 HOH D . ? HOH A 2017 . ? 1_555 ? # _database_PDB_matrix.entry_id 1GV2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GV2 _atom_sites.fract_transf_matrix[1][1] 0.025825 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000392 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035398 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022663 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 89 89 GLU GLU A . n A 1 2 LEU 2 90 90 LEU LEU A . n A 1 3 ILE 3 91 91 ILE ILE A . n A 1 4 LYS 4 92 92 LYS LYS A . n A 1 5 GLY 5 93 93 GLY GLY A . n A 1 6 PRO 6 94 94 PRO PRO A . n A 1 7 TRP 7 95 95 TRP TRP A . n A 1 8 THR 8 96 96 THR THR A . n A 1 9 LYS 9 97 97 LYS LYS A . n A 1 10 GLU 10 98 98 GLU GLU A . n A 1 11 GLU 11 99 99 GLU GLU A . n A 1 12 ASP 12 100 100 ASP ASP A . n A 1 13 GLN 13 101 101 GLN GLN A . n A 1 14 ARG 14 102 102 ARG ARG A . n A 1 15 VAL 15 103 103 VAL VAL A . n A 1 16 ILE 16 104 104 ILE ILE A . n A 1 17 LYS 17 105 105 LYS LYS A . n A 1 18 LEU 18 106 106 LEU LEU A . n A 1 19 VAL 19 107 107 VAL VAL A . n A 1 20 GLN 20 108 108 GLN GLN A . n A 1 21 LYS 21 109 109 LYS LYS A . n A 1 22 TYR 22 110 110 TYR TYR A . n A 1 23 GLY 23 111 111 GLY GLY A . n A 1 24 PRO 24 112 112 PRO PRO A . n A 1 25 LYS 25 113 113 LYS LYS A . n A 1 26 ARG 26 114 114 ARG ARG A . n A 1 27 TRP 27 115 115 TRP TRP A . n A 1 28 SER 28 116 116 SER SER A . n A 1 29 VAL 29 117 117 VAL VAL A . n A 1 30 ILE 30 118 118 ILE ILE A . n A 1 31 ALA 31 119 119 ALA ALA A . n A 1 32 LYS 32 120 120 LYS LYS A . n A 1 33 HIS 33 121 121 HIS HIS A . n A 1 34 LEU 34 122 122 LEU LEU A . n A 1 35 LYS 35 123 123 LYS LYS A . n A 1 36 GLY 36 124 124 GLY GLY A . n A 1 37 ARG 37 125 125 ARG ARG A . n A 1 38 ILE 38 126 126 ILE ILE A . n A 1 39 GLY 39 127 127 GLY GLY A . n A 1 40 LYS 40 128 128 LYS LYS A . n A 1 41 GLN 41 129 129 GLN GLN A . n A 1 42 CYS 42 130 130 CYS CYS A . n A 1 43 ARG 43 131 131 ARG ARG A . n A 1 44 GLU 44 132 132 GLU GLU A . n A 1 45 ARG 45 133 133 ARG ARG A . n A 1 46 TRP 46 134 134 TRP TRP A . n A 1 47 HIS 47 135 135 HIS HIS A . n A 1 48 ASN 48 136 136 ASN ASN A . n A 1 49 HIS 49 137 137 HIS HIS A . n A 1 50 LEU 50 138 138 LEU LEU A . n A 1 51 ASN 51 139 139 ASN ASN A . n A 1 52 PRO 52 140 140 PRO PRO A . n A 1 53 GLU 53 141 141 GLU GLU A . n A 1 54 VAL 54 142 142 VAL VAL A . n A 1 55 LYS 55 143 143 LYS LYS A . n A 1 56 LYS 56 144 144 LYS LYS A . n A 1 57 THR 57 145 145 THR THR A . n A 1 58 SER 58 146 146 SER SER A . n A 1 59 TRP 59 147 147 TRP TRP A . n A 1 60 THR 60 148 148 THR THR A . n A 1 61 GLU 61 149 149 GLU GLU A . n A 1 62 GLU 62 150 150 GLU GLU A . n A 1 63 GLU 63 151 151 GLU GLU A . n A 1 64 ASP 64 152 152 ASP ASP A . n A 1 65 ARG 65 153 153 ARG ARG A . n A 1 66 ILE 66 154 154 ILE ILE A . n A 1 67 ILE 67 155 155 ILE ILE A . n A 1 68 TYR 68 156 156 TYR TYR A . n A 1 69 GLN 69 157 157 GLN GLN A . n A 1 70 ALA 70 158 158 ALA ALA A . n A 1 71 HIS 71 159 159 HIS HIS A . n A 1 72 LYS 72 160 160 LYS LYS A . n A 1 73 ARG 73 161 161 ARG ARG A . n A 1 74 LEU 74 162 162 LEU LEU A . n A 1 75 GLY 75 163 163 GLY GLY A . n A 1 76 ASN 76 164 164 ASN ASN A . n A 1 77 ARG 77 165 165 ARG ARG A . n A 1 78 TRP 78 166 166 TRP TRP A . n A 1 79 ALA 79 167 167 ALA ALA A . n A 1 80 GLU 80 168 168 GLU GLU A . n A 1 81 ILE 81 169 169 ILE ILE A . n A 1 82 ALA 82 170 170 ALA ALA A . n A 1 83 LYS 83 171 171 LYS LYS A . n A 1 84 LEU 84 172 172 LEU LEU A . n A 1 85 LEU 85 173 173 LEU LEU A . n A 1 86 PRO 86 174 174 PRO PRO A . n A 1 87 GLY 87 175 175 GLY GLY A . n A 1 88 ARG 88 176 176 ARG ARG A . n A 1 89 THR 89 177 177 THR THR A . n A 1 90 ASP 90 178 178 ASP ASP A . n A 1 91 ASN 91 179 179 ASN ASN A . n A 1 92 ALA 92 180 180 ALA ALA A . n A 1 93 ILE 93 181 181 ILE ILE A . n A 1 94 LYS 94 182 182 LYS LYS A . n A 1 95 ASN 95 183 183 ASN ASN A . n A 1 96 HIS 96 184 184 HIS HIS A . n A 1 97 TRP 97 185 185 TRP TRP A . n A 1 98 ASN 98 186 186 ASN ASN A . n A 1 99 SER 99 187 187 SER SER A . n A 1 100 THR 100 188 188 THR THR A . n A 1 101 MET 101 189 189 MET MET A . n A 1 102 ARG 102 190 190 ARG ARG A . n A 1 103 ARG 103 191 191 ARG ARG A . n A 1 104 LYS 104 192 ? ? ? A . n A 1 105 VAL 105 193 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1191 1191 NA NA A . C 2 NA 1 1192 1192 NA NA A . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . D 3 HOH 45 2045 2045 HOH HOH A . D 3 HOH 46 2046 2046 HOH HOH A . D 3 HOH 47 2047 2047 HOH HOH A . D 3 HOH 48 2048 2048 HOH HOH A . D 3 HOH 49 2049 2049 HOH HOH A . D 3 HOH 50 2050 2050 HOH HOH A . D 3 HOH 51 2051 2051 HOH HOH A . D 3 HOH 52 2052 2052 HOH HOH A . D 3 HOH 53 2053 2053 HOH HOH A . D 3 HOH 54 2054 2054 HOH HOH A . D 3 HOH 55 2055 2055 HOH HOH A . D 3 HOH 56 2056 2056 HOH HOH A . D 3 HOH 57 2057 2057 HOH HOH A . D 3 HOH 58 2058 2058 HOH HOH A . D 3 HOH 59 2059 2059 HOH HOH A . D 3 HOH 60 2060 2060 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LEU 85 ? A LEU 173 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? A ARG 88 ? A ARG 176 ? 1_555 93.8 ? 2 O ? A LEU 85 ? A LEU 173 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 OD1 ? A ASN 48 ? A ASN 136 ? 1_555 157.1 ? 3 O ? A ARG 88 ? A ARG 176 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 OD1 ? A ASN 48 ? A ASN 136 ? 1_555 107.9 ? 4 O ? A LEU 85 ? A LEU 173 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? A ALA 82 ? A ALA 170 ? 1_555 91.8 ? 5 O ? A ARG 88 ? A ARG 176 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? A ALA 82 ? A ALA 170 ? 1_555 106.7 ? 6 OD1 ? A ASN 48 ? A ASN 136 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? A ALA 82 ? A ALA 170 ? 1_555 89.0 ? 7 O ? A LEU 85 ? A LEU 173 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? D HOH . ? A HOH 2052 ? 1_555 94.8 ? 8 O ? A ARG 88 ? A ARG 176 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? D HOH . ? A HOH 2052 ? 1_555 85.6 ? 9 OD1 ? A ASN 48 ? A ASN 136 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? D HOH . ? A HOH 2052 ? 1_555 80.0 ? 10 O ? A ALA 82 ? A ALA 170 ? 1_555 NA ? B NA . ? A NA 1191 ? 1_555 O ? D HOH . ? A HOH 2052 ? 1_555 165.7 ? 11 O ? A ALA 31 ? A ALA 119 ? 1_555 NA ? C NA . ? A NA 1192 ? 1_555 O ? A ARG 37 ? A ARG 125 ? 1_555 94.5 ? 12 O ? A ALA 31 ? A ALA 119 ? 1_555 NA ? C NA . ? A NA 1192 ? 1_555 O ? A LEU 34 ? A LEU 122 ? 1_555 85.1 ? 13 O ? A ARG 37 ? A ARG 125 ? 1_555 NA ? C NA . ? A NA 1192 ? 1_555 O ? A LEU 34 ? A LEU 122 ? 1_555 102.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-03 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 X-PLOR phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 112 ? ? -79.75 32.41 2 1 LYS A 113 ? A -155.42 30.11 3 1 LYS A 113 ? B -109.94 -146.28 4 1 ARG A 114 ? B 39.82 34.45 5 1 HIS A 137 ? ? -147.75 -48.77 6 1 ARG A 165 ? ? -100.48 79.30 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2015 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.83 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 191 ? CA ? A ARG 103 CA 2 1 Y 1 A ARG 191 ? C ? A ARG 103 C 3 1 Y 1 A ARG 191 ? O ? A ARG 103 O 4 1 Y 1 A ARG 191 ? CB ? A ARG 103 CB 5 1 Y 1 A ARG 191 ? CG ? A ARG 103 CG 6 1 Y 1 A ARG 191 ? CD ? A ARG 103 CD 7 1 Y 1 A ARG 191 ? NE ? A ARG 103 NE 8 1 Y 1 A ARG 191 ? CZ ? A ARG 103 CZ 9 1 Y 1 A ARG 191 ? NH1 ? A ARG 103 NH1 10 1 Y 1 A ARG 191 ? NH2 ? A ARG 103 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 192 ? A LYS 104 2 1 Y 1 A VAL 193 ? A VAL 105 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH #