data_1GV6 # _entry.id 1GV6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1GV6 PDBE EBI-9382 WWPDB D_1290009382 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GV6 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2002-02-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nielsen, K.M.E.' 1 'Petersen, M.' 2 'Haakansson, A.E.' 3 'Wengel, J.' 4 'Jacobsen, J.P.' 5 # _citation.id primary _citation.title 'Alfa-L-Lna (Alfa-L-Ribo Configured Locked Nucleic Acid) Recognition of DNA: An NMR Spectroscopic Study' _citation.journal_abbrev Chemistry _citation.journal_volume 8 _citation.page_first 3001 _citation.page_last ? _citation.year 2002 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 0947-6539 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12489231 _citation.pdbx_database_id_DOI '10.1002/1521-3765(20020703)8:13<3001::AID-CHEM3001>3.0.CO;2-1' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nielsen, K.M.E.' 1 primary 'Petersen, M.' 2 primary 'Haakansson, A.E.' 3 primary 'Wengel, J.' 4 primary 'Jacobsen, J.P.' 5 # _cell.entry_id 1GV6 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GV6 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '5- D(*CP*(ATL)P*GP*CP*(ATL)P*(ATL)P*CP*(ATL)P* GP*C) -3' 3098.997 1 ? ? ? ;ATL IS ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S, 3R, 4S, 7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO[2. 2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE ; 2 polymer syn '5- D(*GP*CP*AP*GP*AP*AP*GP*CP*AP*G) -3' 3103.057 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polydeoxyribonucleotide/polyribonucleotide hybrid' no yes '(DC)(ATL)(DG)(DC)(ATL)(ATL)(DC)(ATL)(DG)(DC)' CTGCTTCTGC A ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DA)(DG)(DA)(DA)(DG)(DC)(DA)(DG)' GCAGAAGCAG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 ATL n 1 3 DG n 1 4 DC n 1 5 ATL n 1 6 ATL n 1 7 DC n 1 8 ATL n 1 9 DG n 1 10 DC n 2 1 DG n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DA n 2 7 DG n 2 8 DC n 2 9 DA n 2 10 DG n # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1GV6 1 ? ? 1GV6 ? 2 PDB 1GV6 2 ? ? 1GV6 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1GV6 A 1 ? 10 ? 1GV6 1 ? 10 ? 1 10 2 2 1GV6 B 1 ? 10 ? 1GV6 11 ? 20 ? 11 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ATL 'RNA linking' n '[(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H15 N2 O9 P' 350.219 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 DQF-COSY 1 3 1 TOCSY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.01 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units M _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model UNITY _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1GV6 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1GV6 _pdbx_nmr_details.text ;THE STRUCTURE WAS DETERMINED USING 1H,1H- NOES FROM 100MS NOESY AND WATERGATE NOESY EXPERIMENTS. SUGAR TORSION RESTRAINTS WERE DERIVED BY ANALYSIS OF A DQF-COSY SPECTRUM ; # _pdbx_nmr_ensemble.entry_id 1GV6 _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria ? # _pdbx_nmr_representative.entry_id 1GV6 _pdbx_nmr_representative.conformer_id 12 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement AMBER5 ? 'CASE, DA, KOLLMAN, PA, ET AL.' 1 'structure solution' FELIX ? ? 2 'structure solution' MARDIGRAS ? ? 3 'structure solution' AMBER5 ? ? 4 # _exptl.entry_id 1GV6 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1GV6 _struct.title 'Solution structure of alfa-L-LNA:DNA duplex' _struct.pdbx_descriptor "5'-D(*C)-R(P*(ATL))-D(P*GP*C)-R(P*(ATL)P*(ATL))-D(P*C)-R(P*(ATL))-D(P*GP*C)-3'" _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GV6 _struct_keywords.pdbx_keywords 'LOCKED NUCLEIC ACID' _struct_keywords.text 'LOCKED NUCLEIC ACID, LNA, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A DC 1 "O3'" ? ? ? 1_555 A ATL 2 P ? ? A DC 1 A ATL 2 1_555 ? ? ? ? ? ? ? 1.623 ? covale2 covale ? ? A ATL 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A ATL 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.615 ? covale3 covale ? ? A DC 4 "O3'" ? ? ? 1_555 A ATL 5 P ? ? A DC 4 A ATL 5 1_555 ? ? ? ? ? ? ? 1.619 ? covale4 covale ? ? A ATL 5 "O3'" ? ? ? 1_555 A ATL 6 P ? ? A ATL 5 A ATL 6 1_555 ? ? ? ? ? ? ? 1.611 ? covale5 covale ? ? A ATL 6 "O3'" ? ? ? 1_555 A DC 7 P ? ? A ATL 6 A DC 7 1_555 ? ? ? ? ? ? ? 1.613 ? covale6 covale ? ? A DC 7 "O3'" ? ? ? 1_555 A ATL 8 P ? ? A DC 7 A ATL 8 1_555 ? ? ? ? ? ? ? 1.620 ? covale7 covale ? ? A ATL 8 "O3'" ? ? ? 1_555 A DG 9 P ? ? A ATL 8 A DG 9 1_555 ? ? ? ? ? ? ? 1.615 ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A ATL 2 N3 ? ? ? 1_555 B DA 9 N1 ? ? A ATL 2 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A ATL 2 O4 ? ? ? 1_555 B DA 9 N6 ? ? A ATL 2 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A ATL 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? A ATL 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A ATL 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A ATL 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A ATL 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A ATL 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A ATL 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A ATL 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A ATL 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A ATL 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A ATL 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A ATL 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1GV6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GV6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 ATL 2 2 2 ATL ATL A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 ATL 5 5 5 ATL ATL A . n A 1 6 ATL 6 6 6 ATL ATL A . n A 1 7 DC 7 7 7 DC DC A . n A 1 8 ATL 8 8 8 ATL ATL A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DC 10 10 10 DC DC A . n B 2 1 DG 1 11 11 DG DG B . n B 2 2 DC 2 12 12 DC DC B . n B 2 3 DA 3 13 13 DA DA B . n B 2 4 DG 4 14 14 DG DG B . n B 2 5 DA 5 15 15 DA DA B . n B 2 6 DA 6 16 16 DA DA B . n B 2 7 DG 7 17 17 DG DG B . n B 2 8 DC 8 18 18 DC DC B . n B 2 9 DA 9 19 19 DA DA B . n B 2 10 DG 10 20 20 DG DG B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ATL 2 A ATL 2 ? DT ? 2 A ATL 5 A ATL 5 ? DT ? 3 A ATL 6 A ATL 6 ? DT ? 4 A ATL 8 A ATL 8 ? DT ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-05 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # _pdbx_entry_details.entry_id 1GV6 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;MODRES: 1GV6 ATL A 2() ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO [2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE MODRES: 1GV6 ATL A 5() ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO [2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE MODRES: 1GV6 ATL A 6() ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO [2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE MODRES: 1GV6 ATL A 8() ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO [2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.12 108.30 1.82 0.30 N 2 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.29 108.30 4.99 0.30 N 3 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.35 108.30 4.05 0.30 N 4 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.98 108.30 3.68 0.30 N 5 1 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.40 106.00 6.40 0.60 N 6 1 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.73 108.30 4.43 0.30 N 7 1 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.30 106.00 5.30 0.60 N 8 1 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.15 102.20 -5.05 0.70 N 9 1 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.89 108.30 5.59 0.30 N 10 1 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.88 108.30 2.58 0.30 N 11 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.34 108.30 3.04 0.30 N 12 1 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.15 106.80 3.35 0.50 N 13 1 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.34 108.30 2.04 0.30 N 14 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.49 108.30 2.19 0.30 N 15 2 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.50 108.30 5.20 0.30 N 16 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.32 108.30 4.02 0.30 N 17 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.30 108.30 2.00 0.30 N 18 2 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.40 108.30 6.10 0.30 N 19 2 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.24 106.00 6.24 0.60 N 20 2 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 113.82 108.30 5.52 0.30 N 21 2 "C3'" B DA 13 ? ? "O3'" B DA 13 ? ? P B DG 14 ? ? 127.02 119.70 7.32 1.20 Y 22 2 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.23 108.30 1.93 0.30 N 23 2 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.00 106.00 5.00 0.60 N 24 2 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.48 102.20 -4.72 0.70 N 25 2 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.91 108.30 5.61 0.30 N 26 2 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.12 108.30 2.82 0.30 N 27 2 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.00 108.30 2.70 0.30 N 28 2 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.79 108.30 2.49 0.30 N 29 2 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 112.19 108.30 3.89 0.30 N 30 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.11 108.30 1.81 0.30 N 31 3 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.54 108.30 5.24 0.30 N 32 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.07 108.30 3.77 0.30 N 33 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.25 108.30 1.95 0.30 N 34 3 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.45 108.30 6.15 0.30 N 35 3 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.33 106.00 6.33 0.60 N 36 3 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.16 108.30 3.86 0.30 N 37 3 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.18 106.00 5.18 0.60 N 38 3 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.17 102.20 -5.03 0.70 N 39 3 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.71 108.30 5.41 0.30 N 40 3 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.68 108.30 2.38 0.30 N 41 3 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.36 108.30 3.06 0.30 N 42 3 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 109.99 106.80 3.19 0.50 N 43 3 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.48 108.30 2.18 0.30 N 44 3 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.12 108.30 2.82 0.30 N 45 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.41 108.30 2.11 0.30 N 46 4 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.32 108.30 5.02 0.30 N 47 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.35 108.30 4.05 0.30 N 48 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.15 108.30 1.85 0.30 N 49 4 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.43 108.30 5.13 0.30 N 50 4 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.47 106.00 6.47 0.60 N 51 4 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.43 108.30 4.13 0.30 N 52 4 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.20 106.00 5.20 0.60 N 53 4 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.40 102.20 -4.80 0.70 N 54 4 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.99 108.30 5.69 0.30 N 55 4 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.98 108.30 2.68 0.30 N 56 4 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.17 108.30 2.87 0.30 N 57 4 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.13 106.80 3.33 0.50 N 58 4 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.61 108.30 2.31 0.30 N 59 4 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.78 108.30 2.48 0.30 N 60 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.56 108.30 2.26 0.30 N 61 5 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.15 108.30 4.85 0.30 N 62 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.55 108.30 4.25 0.30 N 63 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.17 108.30 1.87 0.30 N 64 5 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.74 108.30 4.44 0.30 N 65 5 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.22 106.00 6.22 0.60 N 66 5 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.79 108.30 4.49 0.30 N 67 5 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.23 106.00 5.23 0.60 N 68 5 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.15 102.20 -5.05 0.70 N 69 5 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.61 108.30 5.31 0.30 N 70 5 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.48 108.30 3.18 0.30 N 71 5 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.16 108.30 2.86 0.30 N 72 5 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 109.98 106.80 3.18 0.50 N 73 5 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.78 108.30 2.48 0.30 N 74 5 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.39 108.30 3.09 0.30 N 75 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.12 108.30 2.82 0.30 N 76 6 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.12 108.30 4.82 0.30 N 77 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.82 108.30 3.52 0.30 N 78 6 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.86 108.30 5.56 0.30 N 79 6 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.39 106.00 6.39 0.60 N 80 6 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.84 108.30 4.54 0.30 N 81 6 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.26 106.00 5.26 0.60 N 82 6 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.24 102.20 -4.96 0.70 N 83 6 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.74 108.30 5.44 0.30 N 84 6 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.07 108.30 2.77 0.30 N 85 6 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.35 108.30 2.05 0.30 N 86 6 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.73 108.30 3.43 0.30 N 87 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.46 108.30 2.16 0.30 N 88 7 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 115.49 108.30 7.19 0.30 N 89 7 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A ATL 8 ? ? 127.52 119.70 7.82 1.20 Y 90 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 114.72 108.30 6.42 0.30 N 91 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.26 108.30 1.96 0.30 N 92 7 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.33 108.30 5.03 0.30 N 93 7 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 111.95 106.00 5.95 0.60 N 94 7 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 111.90 108.30 3.60 0.30 N 95 7 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.34 106.00 5.34 0.60 N 96 7 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.18 102.20 -5.02 0.70 N 97 7 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.88 108.30 5.58 0.30 N 98 7 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.27 108.30 1.97 0.30 N 99 7 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.86 108.30 2.56 0.30 N 100 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.59 108.30 2.29 0.30 N 101 8 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.71 108.30 5.41 0.30 N 102 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.47 108.30 4.17 0.30 N 103 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.28 108.30 1.98 0.30 N 104 8 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.40 108.30 5.10 0.30 N 105 8 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.31 106.00 6.31 0.60 N 106 8 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.02 108.30 3.72 0.30 N 107 8 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.41 106.00 5.41 0.60 N 108 8 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.15 102.20 -5.05 0.70 N 109 8 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 114.00 108.30 5.70 0.30 N 110 8 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.47 108.30 2.17 0.30 N 111 8 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.22 108.30 1.92 0.30 N 112 8 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.04 108.30 2.74 0.30 N 113 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.92 108.30 2.62 0.30 N 114 9 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.41 108.30 4.11 0.30 N 115 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.41 108.30 2.11 0.30 N 116 9 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.72 108.30 5.42 0.30 N 117 9 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 111.93 106.00 5.93 0.60 N 118 9 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 111.60 108.30 3.30 0.30 N 119 9 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.33 106.00 5.33 0.60 N 120 9 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.26 102.20 -4.94 0.70 N 121 9 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 114.06 108.30 5.76 0.30 N 122 9 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.60 108.30 2.30 0.30 N 123 9 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.28 108.30 1.98 0.30 N 124 9 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.60 108.30 2.30 0.30 N 125 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.11 108.30 2.81 0.30 N 126 10 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.11 108.30 4.81 0.30 N 127 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.81 108.30 4.51 0.30 N 128 10 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.27 108.30 1.97 0.30 N 129 10 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.70 108.30 5.40 0.30 N 130 10 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.33 106.00 6.33 0.60 N 131 10 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 111.50 108.30 3.20 0.30 N 132 10 "C3'" B DA 13 ? ? "O3'" B DA 13 ? ? P B DG 14 ? ? 126.92 119.70 7.22 1.20 Y 133 10 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.24 106.00 5.24 0.60 N 134 10 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.14 102.20 -5.06 0.70 N 135 10 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.36 108.30 5.06 0.30 N 136 10 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.82 108.30 2.52 0.30 N 137 10 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.27 108.30 1.97 0.30 N 138 10 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.55 108.30 2.25 0.30 N 139 11 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.23 108.30 2.93 0.30 N 140 11 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 114.08 108.30 5.78 0.30 N 141 11 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.05 108.30 3.75 0.30 N 142 11 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.20 108.30 1.90 0.30 N 143 11 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.25 108.30 4.95 0.30 N 144 11 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.07 106.00 6.07 0.60 N 145 11 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.65 108.30 4.35 0.30 N 146 11 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.47 106.00 5.47 0.60 N 147 11 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 96.96 102.20 -5.24 0.70 N 148 11 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.77 108.30 5.47 0.30 N 149 11 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.77 108.30 2.47 0.30 N 150 11 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.20 108.30 1.90 0.30 N 151 11 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.62 108.30 2.32 0.30 N 152 12 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.47 108.30 2.17 0.30 N 153 12 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.36 108.30 5.06 0.30 N 154 12 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.95 108.30 3.65 0.30 N 155 12 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.16 108.30 1.86 0.30 N 156 12 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 115.05 108.30 6.75 0.30 N 157 12 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.28 106.00 6.28 0.60 N 158 12 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.50 108.30 4.20 0.30 N 159 12 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.33 106.00 5.33 0.60 N 160 12 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 96.96 102.20 -5.24 0.70 N 161 12 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.65 108.30 5.35 0.30 N 162 12 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.97 108.30 2.67 0.30 N 163 12 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.97 108.30 2.67 0.30 N 164 12 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.64 108.30 2.34 0.30 N 165 12 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 112.96 108.30 4.66 0.30 N 166 13 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.43 108.30 2.13 0.30 N 167 13 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.37 108.30 5.07 0.30 N 168 13 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.26 108.30 3.96 0.30 N 169 13 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.18 108.30 1.88 0.30 N 170 13 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.10 108.30 5.80 0.30 N 171 13 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.40 106.00 6.40 0.60 N 172 13 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.52 108.30 4.22 0.30 N 173 13 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.26 106.00 5.26 0.60 N 174 13 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.33 102.20 -4.87 0.70 N 175 13 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.58 108.30 5.28 0.30 N 176 13 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.40 108.30 3.10 0.30 N 177 13 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.25 108.30 2.95 0.30 N 178 13 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.06 106.80 3.26 0.50 N 179 13 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.73 108.30 2.43 0.30 N 180 13 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.08 108.30 2.78 0.30 N 181 14 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.14 108.30 1.84 0.30 N 182 14 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.73 108.30 4.43 0.30 N 183 14 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.25 108.30 3.95 0.30 N 184 14 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.15 108.30 1.85 0.30 N 185 14 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.18 108.30 5.88 0.30 N 186 14 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.39 106.00 6.39 0.60 N 187 14 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.48 108.30 4.18 0.30 N 188 14 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.22 106.00 5.22 0.60 N 189 14 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.31 102.20 -4.89 0.70 N 190 14 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.61 108.30 5.31 0.30 N 191 14 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.92 108.30 2.62 0.30 N 192 14 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.68 108.30 3.38 0.30 N 193 14 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.09 106.80 3.29 0.50 N 194 14 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.45 108.30 2.15 0.30 N 195 14 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.01 108.30 2.71 0.30 N 196 15 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.21 108.30 1.91 0.30 N 197 15 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.75 108.30 5.45 0.30 N 198 15 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.24 108.30 3.94 0.30 N 199 15 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.58 108.30 6.28 0.30 N 200 15 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.18 106.00 6.18 0.60 N 201 15 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 113.89 108.30 5.59 0.30 N 202 15 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.15 106.00 5.15 0.60 N 203 15 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.48 102.20 -4.72 0.70 N 204 15 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 114.02 108.30 5.72 0.30 N 205 15 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.19 108.30 2.89 0.30 N 206 15 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.28 108.30 2.98 0.30 N 207 15 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.06 106.80 3.26 0.50 N 208 15 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.70 108.30 2.40 0.30 N 209 15 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.28 108.30 2.98 0.30 N 210 16 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.90 108.30 2.60 0.30 N 211 16 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.49 108.30 4.19 0.30 N 212 16 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.32 108.30 4.02 0.30 N 213 16 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.14 108.30 1.84 0.30 N 214 16 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.35 108.30 4.05 0.30 N 215 16 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.25 106.00 6.25 0.60 N 216 16 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.82 108.30 4.52 0.30 N 217 16 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.26 106.00 5.26 0.60 N 218 16 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.27 102.20 -4.93 0.70 N 219 16 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.76 108.30 5.46 0.30 N 220 16 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.18 108.30 2.88 0.30 N 221 16 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.21 108.30 1.91 0.30 N 222 16 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.69 108.30 3.39 0.30 N 223 17 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.68 108.30 2.38 0.30 N 224 17 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.74 108.30 5.44 0.30 N 225 17 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.26 108.30 3.96 0.30 N 226 17 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.40 108.30 2.10 0.30 N 227 17 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.83 108.30 5.53 0.30 N 228 17 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.15 106.00 6.15 0.60 N 229 17 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.30 108.30 4.00 0.30 N 230 17 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.30 106.00 5.30 0.60 N 231 17 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.30 102.20 -4.90 0.70 N 232 17 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.80 108.30 5.50 0.30 N 233 17 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.46 108.30 2.16 0.30 N 234 17 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.13 108.30 1.83 0.30 N 235 17 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.95 108.30 2.65 0.30 N 236 18 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.37 108.30 5.07 0.30 N 237 18 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.14 108.30 3.84 0.30 N 238 18 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.19 108.30 1.89 0.30 N 239 18 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.02 108.30 5.72 0.30 N 240 18 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.42 106.00 6.42 0.60 N 241 18 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.56 108.30 4.26 0.30 N 242 18 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.32 106.00 5.32 0.60 N 243 18 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.00 102.20 -5.20 0.70 N 244 18 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.54 108.30 5.24 0.30 N 245 18 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.90 108.30 2.60 0.30 N 246 18 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.20 108.30 2.90 0.30 N 247 18 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 110.02 106.80 3.22 0.50 N 248 18 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.63 108.30 2.33 0.30 N 249 18 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.26 108.30 2.96 0.30 N 250 19 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.78 108.30 2.48 0.30 N 251 19 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.40 108.30 4.10 0.30 N 252 19 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.79 108.30 4.49 0.30 N 253 19 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.42 108.30 6.12 0.30 N 254 19 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.41 106.00 6.41 0.60 N 255 19 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.51 108.30 4.21 0.30 N 256 19 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.33 106.00 5.33 0.60 N 257 19 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.08 102.20 -5.12 0.70 N 258 19 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.52 108.30 5.22 0.30 N 259 19 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 111.07 108.30 2.77 0.30 N 260 19 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.29 108.30 1.99 0.30 N 261 19 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 110.46 108.30 2.16 0.30 N 262 20 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.40 108.30 4.10 0.30 N 263 20 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.30 108.30 4.00 0.30 N 264 20 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.11 108.30 1.81 0.30 N 265 20 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.71 108.30 5.41 0.30 N 266 20 "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? "C3'" B DA 13 ? ? 112.34 106.00 6.34 0.60 N 267 20 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 112.65 108.30 4.35 0.30 N 268 20 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 111.20 106.00 5.20 0.60 N 269 20 "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.15 102.20 -5.05 0.70 N 270 20 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.64 108.30 5.34 0.30 N 271 20 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.93 108.30 2.63 0.30 N 272 20 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.16 108.30 2.86 0.30 N 273 20 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? "C2'" B DA 19 ? ? 109.81 106.80 3.01 0.50 N 274 20 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 110.58 108.30 2.28 0.30 N 275 20 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.79 108.30 3.49 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 9 ? ? 0.182 'SIDE CHAIN' 2 1 DG B 14 ? ? 0.058 'SIDE CHAIN' 3 2 DG A 9 ? ? 0.198 'SIDE CHAIN' 4 2 DG B 14 ? ? 0.077 'SIDE CHAIN' 5 3 DC A 7 ? ? 0.070 'SIDE CHAIN' 6 3 DG A 9 ? ? 0.173 'SIDE CHAIN' 7 3 DG B 14 ? ? 0.064 'SIDE CHAIN' 8 4 DG A 9 ? ? 0.167 'SIDE CHAIN' 9 4 DG B 14 ? ? 0.065 'SIDE CHAIN' 10 5 DG A 9 ? ? 0.174 'SIDE CHAIN' 11 5 DG B 14 ? ? 0.062 'SIDE CHAIN' 12 6 DC A 7 ? ? 0.064 'SIDE CHAIN' 13 6 DG A 9 ? ? 0.182 'SIDE CHAIN' 14 6 DG B 14 ? ? 0.061 'SIDE CHAIN' 15 6 DG B 17 ? ? 0.059 'SIDE CHAIN' 16 7 DG A 9 ? ? 0.139 'SIDE CHAIN' 17 7 DG B 14 ? ? 0.053 'SIDE CHAIN' 18 8 DC A 7 ? ? 0.070 'SIDE CHAIN' 19 8 DG A 9 ? ? 0.178 'SIDE CHAIN' 20 8 DG B 14 ? ? 0.064 'SIDE CHAIN' 21 9 DC A 7 ? ? 0.124 'SIDE CHAIN' 22 9 DG A 9 ? ? 0.116 'SIDE CHAIN' 23 9 DG B 11 ? ? 0.080 'SIDE CHAIN' 24 9 DC B 12 ? ? 0.075 'SIDE CHAIN' 25 9 DG B 14 ? ? 0.065 'SIDE CHAIN' 26 10 DC A 7 ? ? 0.081 'SIDE CHAIN' 27 10 DG A 9 ? ? 0.154 'SIDE CHAIN' 28 10 DG B 14 ? ? 0.069 'SIDE CHAIN' 29 11 DG A 9 ? ? 0.177 'SIDE CHAIN' 30 11 DG B 17 ? ? 0.062 'SIDE CHAIN' 31 12 DC A 7 ? ? 0.070 'SIDE CHAIN' 32 12 DG A 9 ? ? 0.175 'SIDE CHAIN' 33 12 DG B 14 ? ? 0.058 'SIDE CHAIN' 34 13 DG A 9 ? ? 0.176 'SIDE CHAIN' 35 13 DG B 14 ? ? 0.067 'SIDE CHAIN' 36 14 DG A 9 ? ? 0.167 'SIDE CHAIN' 37 14 DG B 14 ? ? 0.068 'SIDE CHAIN' 38 15 DG A 9 ? ? 0.218 'SIDE CHAIN' 39 15 DG B 14 ? ? 0.065 'SIDE CHAIN' 40 16 DG A 9 ? ? 0.184 'SIDE CHAIN' 41 16 DG B 14 ? ? 0.060 'SIDE CHAIN' 42 16 DG B 17 ? ? 0.060 'SIDE CHAIN' 43 17 DC A 7 ? ? 0.078 'SIDE CHAIN' 44 17 DG A 9 ? ? 0.174 'SIDE CHAIN' 45 17 DG B 14 ? ? 0.060 'SIDE CHAIN' 46 18 DG A 9 ? ? 0.158 'SIDE CHAIN' 47 18 DG B 14 ? ? 0.064 'SIDE CHAIN' 48 19 DC A 7 ? ? 0.073 'SIDE CHAIN' 49 19 DG A 9 ? ? 0.175 'SIDE CHAIN' 50 19 DG B 14 ? ? 0.065 'SIDE CHAIN' 51 19 DG B 17 ? ? 0.057 'SIDE CHAIN' 52 20 DC A 7 ? ? 0.064 'SIDE CHAIN' 53 20 DG A 9 ? ? 0.172 'SIDE CHAIN' 54 20 DG B 14 ? ? 0.063 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1GV6 'double helix' 1GV6 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.407 0.017 -0.033 -9.174 4.655 -2.513 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A ATL 2 1_555 B DA 9 1_555 -0.348 0.022 -0.729 -0.956 -0.892 2.744 2 A_ATL2:DA19_B A 2 ? B 19 ? 20 1 1 A DG 3 1_555 B DC 8 1_555 -0.627 -0.120 -0.448 -13.163 9.786 -1.310 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DC 4 1_555 B DG 7 1_555 0.208 0.076 -0.144 -5.547 0.602 -0.002 4 A_DC4:DG17_B A 4 ? B 17 ? 19 1 1 A ATL 5 1_555 B DA 6 1_555 -0.248 0.099 0.055 -14.172 -9.912 -0.592 5 A_ATL5:DA16_B A 5 ? B 16 ? 20 1 1 A ATL 6 1_555 B DA 5 1_555 0.683 -0.212 0.946 -20.248 -6.029 -5.662 6 A_ATL6:DA15_B A 6 ? B 15 ? 20 1 1 A DC 7 1_555 B DG 4 1_555 -0.022 0.102 0.242 -2.775 -23.004 -1.797 7 A_DC7:DG14_B A 7 ? B 14 ? 19 1 1 A ATL 8 1_555 B DA 3 1_555 0.186 -0.058 0.737 -9.289 -11.503 -4.887 8 A_ATL8:DA13_B A 8 ? B 13 ? 20 1 1 A DG 9 1_555 B DC 2 1_555 -0.517 -0.160 0.508 -1.612 -32.511 -2.382 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DC 10 1_555 B DG 1 1_555 0.978 -0.232 0.074 -5.194 -13.375 -3.125 10 A_DC10:DG11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A ATL 2 1_555 B DA 9 1_555 1.196 -0.931 3.533 -0.795 -1.898 25.440 -1.520 -2.953 3.553 -4.301 1.801 25.522 1 AA_DC1ATL2:DA19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A ATL 2 1_555 B DA 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.100 -1.053 5.054 2.559 -30.562 36.094 2.948 0.483 4.580 -41.369 -3.463 47.031 2 AA_ATL2DG3:DC18DA19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 8 1_555 A DC 4 1_555 B DG 7 1_555 -0.175 -0.998 3.261 -0.672 3.821 35.209 -2.192 0.190 3.141 6.293 1.106 35.415 3 AA_DG3DC4:DG17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DC 4 1_555 B DG 7 1_555 A ATL 5 1_555 B DA 6 1_555 0.255 -1.371 3.456 1.105 2.427 24.410 -4.002 -0.246 3.314 5.718 -2.603 24.553 4 AA_DC4ATL5:DA16DG17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A ATL 5 1_555 B DA 6 1_555 A ATL 6 1_555 B DA 5 1_555 -0.086 -1.290 3.582 -3.891 -1.092 35.334 -1.936 -0.484 3.607 -1.792 6.384 35.557 5 AA_ATL5ATL6:DA15DA16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A ATL 6 1_555 B DA 5 1_555 A DC 7 1_555 B DG 4 1_555 -0.321 0.470 2.991 12.111 -6.464 30.960 1.734 2.287 2.546 -11.430 -21.416 33.799 6 AA_ATL6DC7:DG14DA15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DC 7 1_555 B DG 4 1_555 A ATL 8 1_555 B DA 3 1_555 0.813 -0.141 3.484 -3.254 -1.780 33.907 0.058 -1.931 3.396 -3.040 5.558 34.104 7 AA_DC7ATL8:DA13DG14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A ATL 8 1_555 B DA 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.606 0.684 3.284 4.958 -8.829 33.927 2.385 1.705 2.906 -14.727 -8.270 35.363 8 AA_ATL8DG9:DC12DA13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DC 10 1_555 B DG 1 1_555 0.660 1.002 3.682 -1.663 -2.454 47.013 1.478 -0.978 3.604 -3.072 2.083 47.101 9 AA_DG9DC10:DG11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? #