HEADER CARBOHYDRATE BINDING DOMAIN 19-MAR-02 1GWK TITLE CARBOHYDRATE BINDING MODULE FAMILY29 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-CATALYTIC PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CARBOHYDRATE BINDING MODULE, RESIDUE 335-478; COMPND 5 SYNONYM: NCP1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: SELENO-METHIONINE LABELLED CBM29 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PIROMYCES EQUI; SOURCE 3 ORGANISM_TAXID: 99929; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CARBOHYDRATE BINDING DOMAIN, GLUCOMANNAN, CELLOHEXAOSE, MANNOHEXAOSE, KEYWDS 2 CELLULOSOME EXPDTA X-RAY DIFFRACTION AUTHOR S.J.CHARNOCK,D.NURIZZO,G.J.DAVIES REVDAT 4 06-NOV-24 1GWK 1 LINK REVDAT 3 13-JUL-11 1GWK 1 VERSN REVDAT 2 24-FEB-09 1GWK 1 VERSN REVDAT 1 20-MAR-03 1GWK 0 JRNL AUTH S.J.CHARNOCK,D.BOLAM,D.NURIZZO,L.SZABO,V.MCKIE,H.GILBERT, JRNL AUTH 2 G.J.DAVIES JRNL TITL PROMISCUITY IN LIGAND-BINDING: THE THREE-DIMENSIONAL JRNL TITL 2 STRUCTURE OF A PIROMYCES CARBOHYDRATE-BINDING JRNL TITL 3 MODULE,CBM29-2,IN COMPLEX WITH CELLO- AND MANNOHEXAOSE JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 14077 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 12391332 JRNL DOI 10.1073/PNAS.212516199 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.11 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 798 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1084 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2260 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.49000 REMARK 3 B22 (A**2) : -2.49000 REMARK 3 B33 (A**2) : 4.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.297 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.228 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.193 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2330 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3154 ; 1.677 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 7.578 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;35.524 ;24.878 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;16.098 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.397 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1830 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 840 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 103 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1413 ; 0.756 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2274 ; 1.417 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 917 ; 2.835 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 880 ; 4.205 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4552 23.7736 27.2155 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.0147 REMARK 3 T33: 0.0676 T12: 0.0283 REMARK 3 T13: -0.0510 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.7781 L22: 1.7441 REMARK 3 L33: 2.5781 L12: -0.2119 REMARK 3 L13: 0.0592 L23: -0.1707 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: 0.2240 S13: 0.1562 REMARK 3 S21: -0.2998 S22: -0.0420 S23: 0.2402 REMARK 3 S31: -0.2810 S32: -0.2151 S33: 0.0193 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 148 REMARK 3 ORIGIN FOR THE GROUP (A): 46.2243 19.9831 37.1533 REMARK 3 T TENSOR REMARK 3 T11: 0.0229 T22: 0.0766 REMARK 3 T33: 0.0151 T12: -0.0313 REMARK 3 T13: -0.0098 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.8243 L22: 4.5749 REMARK 3 L33: 2.9039 L12: -0.7802 REMARK 3 L13: -0.6934 L23: 0.9906 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: 0.3134 S13: 0.1103 REMARK 3 S21: -0.2840 S22: 0.0188 S23: -0.0683 REMARK 3 S31: 0.0155 S32: -0.1034 S33: -0.0343 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAR-02. REMARK 100 THE DEPOSITION ID IS D_1290009578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29468 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.26700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM NA HEPES, 150MM KSCN 20% REMARK 280 ETHYLENE GLYCOL, 20% PEG3350, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.52750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.63500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.63500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.29125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.63500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.63500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.76375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.63500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.63500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.29125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.63500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.63500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.76375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.52750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 VAL A 3 REMARK 465 ASN A 145 REMARK 465 LEU A 146 REMARK 465 GLU A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 143 O REMARK 470 GLU B 147 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 124 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP B 103 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 142 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 12 -85.06 -107.68 REMARK 500 LYS B 12 -88.25 -98.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 147 HIS B 148 149.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2031 DISTANCE = 6.17 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GWL RELATED DB: PDB REMARK 900 CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH MANNOHEXAOSE REMARK 900 RELATED ID: 1GWM RELATED DB: PDB REMARK 900 CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH GLUCOHEXAOSE DBREF 1GWK A 1 1 PDB 1GWK 1GWK 1 1 DBREF 1GWK A 2 145 UNP Q9C171 Q9C171 335 478 DBREF 1GWK A 146 153 PDB 1GWK 1GWK 146 153 DBREF 1GWK B 1 1 PDB 1GWK 1GWK 1 1 DBREF 1GWK B 2 145 UNP Q9C171 Q9C171 335 478 DBREF 1GWK B 146 153 PDB 1GWK 1GWK 146 153 SEQRES 1 A 153 MSE ASN VAL ARG ALA THR TYR THR VAL ILE PHE LYS ASN SEQRES 2 A 153 ALA SER GLY LEU PRO ASN GLY TYR ASP ASN TRP GLY TRP SEQRES 3 A 153 GLY CYS THR LEU SER TYR TYR GLY GLY ALA MSE ILE ILE SEQRES 4 A 153 ASN PRO GLN GLU GLY LYS TYR GLY ALA VAL SER LEU LYS SEQRES 5 A 153 ARG ASN SER GLY SER PHE ARG GLY GLY SER LEU ARG PHE SEQRES 6 A 153 ASP MSE LYS ASN GLU GLY LYS VAL LYS ILE LEU VAL GLU SEQRES 7 A 153 ASN SER GLU ALA ASP GLU LYS PHE GLU VAL GLU THR ILE SEQRES 8 A 153 SER PRO SER ASP GLU TYR VAL THR TYR ILE LEU ASP VAL SEQRES 9 A 153 ASP PHE ASP LEU PRO PHE ASP ARG ILE ASP PHE GLN ASP SEQRES 10 A 153 ALA PRO GLY ASN GLY ASP ARG ILE TRP ILE LYS ASN LEU SEQRES 11 A 153 VAL HIS SER THR GLY SER ALA ASP ASP PHE VAL ASP PRO SEQRES 12 A 153 ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 153 MSE ASN VAL ARG ALA THR TYR THR VAL ILE PHE LYS ASN SEQRES 2 B 153 ALA SER GLY LEU PRO ASN GLY TYR ASP ASN TRP GLY TRP SEQRES 3 B 153 GLY CYS THR LEU SER TYR TYR GLY GLY ALA MSE ILE ILE SEQRES 4 B 153 ASN PRO GLN GLU GLY LYS TYR GLY ALA VAL SER LEU LYS SEQRES 5 B 153 ARG ASN SER GLY SER PHE ARG GLY GLY SER LEU ARG PHE SEQRES 6 B 153 ASP MSE LYS ASN GLU GLY LYS VAL LYS ILE LEU VAL GLU SEQRES 7 B 153 ASN SER GLU ALA ASP GLU LYS PHE GLU VAL GLU THR ILE SEQRES 8 B 153 SER PRO SER ASP GLU TYR VAL THR TYR ILE LEU ASP VAL SEQRES 9 B 153 ASP PHE ASP LEU PRO PHE ASP ARG ILE ASP PHE GLN ASP SEQRES 10 B 153 ALA PRO GLY ASN GLY ASP ARG ILE TRP ILE LYS ASN LEU SEQRES 11 B 153 VAL HIS SER THR GLY SER ALA ASP ASP PHE VAL ASP PRO SEQRES 12 B 153 ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS MODRES 1GWK MSE A 37 MET SELENOMETHIONINE MODRES 1GWK MSE A 67 MET SELENOMETHIONINE MODRES 1GWK MSE B 37 MET SELENOMETHIONINE MODRES 1GWK MSE B 67 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 67 8 HET MSE B 37 8 HET MSE B 67 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *92(H2 O) SHEET 1 AA 4 TYR A 7 PHE A 11 0 SHEET 2 AA 4 ILE A 125 SER A 133 -1 O LEU A 130 N ILE A 10 SHEET 3 AA 4 ALA A 36 PRO A 41 -1 O MSE A 37 N ILE A 127 SHEET 4 AA 4 CYS A 28 TYR A 33 -1 O THR A 29 N ASN A 40 SHEET 1 AB 4 TYR A 7 PHE A 11 0 SHEET 2 AB 4 ILE A 125 SER A 133 -1 O LEU A 130 N ILE A 10 SHEET 3 AB 4 SER A 62 ASN A 69 -1 O SER A 62 N SER A 133 SHEET 4 AB 4 SER A 94 ASP A 103 -1 O SER A 94 N ASN A 69 SHEET 1 AC 5 TYR A 21 ASN A 23 0 SHEET 2 AC 5 ALA A 48 ARG A 53 -1 O LYS A 52 N ASP A 22 SHEET 3 AC 5 ARG A 112 ASP A 117 -1 O ILE A 113 N LEU A 51 SHEET 4 AC 5 VAL A 73 ASN A 79 -1 O LYS A 74 N GLN A 116 SHEET 5 AC 5 GLU A 84 ILE A 91 -1 O GLU A 84 N ASN A 79 SHEET 1 BA 4 TYR B 7 PHE B 11 0 SHEET 2 BA 4 ILE B 125 SER B 133 -1 O LEU B 130 N ILE B 10 SHEET 3 BA 4 ALA B 36 PRO B 41 -1 O MSE B 37 N ILE B 127 SHEET 4 BA 4 CYS B 28 TYR B 33 -1 O THR B 29 N ASN B 40 SHEET 1 BB 4 TYR B 7 PHE B 11 0 SHEET 2 BB 4 ILE B 125 SER B 133 -1 O LEU B 130 N ILE B 10 SHEET 3 BB 4 SER B 62 ASN B 69 -1 O SER B 62 N SER B 133 SHEET 4 BB 4 SER B 94 ASP B 103 -1 O SER B 94 N ASN B 69 SHEET 1 BC 5 TYR B 21 ASN B 23 0 SHEET 2 BC 5 ALA B 48 ARG B 53 -1 O LYS B 52 N ASP B 22 SHEET 3 BC 5 ARG B 112 ASP B 117 -1 O ILE B 113 N LEU B 51 SHEET 4 BC 5 VAL B 73 ASN B 79 -1 O LYS B 74 N GLN B 116 SHEET 5 BC 5 GLU B 84 ILE B 91 -1 O GLU B 84 N ASN B 79 LINK C ALA A 36 N MSE A 37 1555 1555 1.32 LINK C MSE A 37 N ILE A 38 1555 1555 1.33 LINK C ASP A 66 N MSE A 67 1555 1555 1.32 LINK C MSE A 67 N LYS A 68 1555 1555 1.33 LINK C ALA B 36 N MSE B 37 1555 1555 1.31 LINK C MSE B 37 N ILE B 38 1555 1555 1.33 LINK C ASP B 66 N MSE B 67 1555 1555 1.32 LINK C MSE B 67 N LYS B 68 1555 1555 1.33 CRYST1 93.270 93.270 83.055 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010721 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010721 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012040 0.00000