HEADER ELECTRON TRANSPORT 25-MAR-02 1GWS TITLE HEXADECAHEME HIGH MOLECULAR WEIGHT CYTOCHROME HMC FROM DESULFOVIBRIO TITLE 2 VULGARIS HILDENBOROUGH COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIGH-MOLECULAR-WEIGHT CYTOCHROME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME CC3; COMPND 5 OTHER_DETAILS: 12 COVALENTLY LINKED HEMES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS; SOURCE 3 ORGANISM_TAXID: 882; SOURCE 4 STRAIN: HILDENBOROUGH KEYWDS ELECTRON TRANSPORT, MULTIHEME CYTOCHROME, SULFATE REDUCING BACTERIA, KEYWDS 2 PERIPLASMIC, HEME EXPDTA X-RAY DIFFRACTION AUTHOR M.CZJZEK,R.HASER,M.BRUSCHI REVDAT 6 23-OCT-24 1GWS 1 REMARK LINK REVDAT 5 25-SEP-19 1GWS 1 COMPND REMARK HET HETNAM REVDAT 5 2 1 HETSYN FORMUL LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 13-JUL-11 1GWS 1 VERSN REVDAT 3 24-FEB-09 1GWS 1 VERSN REVDAT 2 19-FEB-03 1GWS 1 HETNAM REVDAT 1 13-FEB-03 1GWS 0 JRNL AUTH M.CZJZEK,L.ELANTAK,V.ZAMBONI,X.MORELLI,A.DOLLA, JRNL AUTH 2 F.GUERLESQUIN,M.BRUSCHI JRNL TITL THE CRYSTAL STRUCTURE OF THE HEXADACA-HEME CYTOCHROME HMC JRNL TITL 2 AND A STRUCTURAL MODEL OF ITS COMPLEX WITH CYTOCHROME C3 JRNL REF STRUCTURE V. 10 1677 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 12467575 JRNL DOI 10.1016/S0969-2126(02)00909-7 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0.36 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 25316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1845 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3792 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 688 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.11000 REMARK 3 B22 (A**2) : -3.11000 REMARK 3 B33 (A**2) : 4.67000 REMARK 3 B12 (A**2) : -1.55000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.407 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.288 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.215 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.016 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4676 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6534 ; 2.675 ; 2.394 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 502 ; 5.322 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 744 ;21.398 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 560 ; 0.171 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3639 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2532 ; 0.400 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 382 ; 0.220 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 21 ; 0.155 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.676 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2510 ; 1.249 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4014 ; 2.251 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2166 ; 3.493 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2520 ; 4.914 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 114 REMARK 3 RESIDUE RANGE : A 601 A 603 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9190 66.4120 -3.8350 REMARK 3 T TENSOR REMARK 3 T11: 0.2665 T22: 0.2868 REMARK 3 T33: 0.0011 T12: 0.0141 REMARK 3 T13: 0.0005 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 1.9149 L22: 0.7032 REMARK 3 L33: 1.5522 L12: 0.3861 REMARK 3 L13: 0.0549 L23: 0.1062 REMARK 3 S TENSOR REMARK 3 S11: 0.1534 S12: 0.0209 S13: 0.0362 REMARK 3 S21: 0.0202 S22: 0.0051 S23: 0.0363 REMARK 3 S31: -0.0246 S32: 0.1126 S33: -0.1585 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 115 A 222 REMARK 3 RESIDUE RANGE : A 604 A 607 REMARK 3 ORIGIN FOR THE GROUP (A): -21.0900 69.8950 -1.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.2466 T22: 0.2779 REMARK 3 T33: 0.0175 T12: 0.0236 REMARK 3 T13: 0.0209 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.7684 L22: 0.8272 REMARK 3 L33: 0.8107 L12: -0.2970 REMARK 3 L13: -1.0640 L23: -0.1073 REMARK 3 S TENSOR REMARK 3 S11: 0.0926 S12: 0.1049 S13: -0.0466 REMARK 3 S21: 0.0298 S22: -0.0682 S23: 0.0963 REMARK 3 S31: -0.0296 S32: -0.1023 S33: -0.0244 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 260 A 357 REMARK 3 RESIDUE RANGE : A 608 A 612 REMARK 3 ORIGIN FOR THE GROUP (A): -32.5090 94.5120 8.7910 REMARK 3 T TENSOR REMARK 3 T11: 0.2468 T22: 0.3166 REMARK 3 T33: 0.0488 T12: 0.0219 REMARK 3 T13: -0.0105 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: -0.0910 L22: 0.9431 REMARK 3 L33: 0.3821 L12: -0.1872 REMARK 3 L13: -0.0326 L23: -0.0625 REMARK 3 S TENSOR REMARK 3 S11: -0.0537 S12: 0.0250 S13: 0.0321 REMARK 3 S21: 0.0840 S22: 0.0302 S23: -0.0727 REMARK 3 S31: 0.0258 S32: 0.0413 S33: 0.0235 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 410 A 512 REMARK 3 RESIDUE RANGE : A 613 A 616 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7500 121.0660 -6.0830 REMARK 3 T TENSOR REMARK 3 T11: 0.2419 T22: 0.3375 REMARK 3 T33: 0.0167 T12: 0.0096 REMARK 3 T13: -0.0442 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 1.1524 L22: 2.2275 REMARK 3 L33: 0.6915 L12: 0.7502 REMARK 3 L13: -0.4906 L23: -1.1255 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: 0.1528 S13: 0.1857 REMARK 3 S21: 0.0214 S22: 0.0112 S23: 0.0850 REMARK 3 S31: -0.0432 S32: -0.0399 S33: -0.0085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ALA A 144, NO DENSITY PRESENT FOR SIDE REMARK 3 CHAIN, THE RESIDUE WAS THERFORE MODELED AS ALA ALA A 512, NO REMARK 3 DENSITY PRESENT FOR SIDE CHAIN, THE RESIDUE WAS THERFORE MODELED REMARK 3 AS ALA REMARK 4 REMARK 4 1GWS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAR-02. REMARK 100 THE DEPOSITION ID IS D_1290009599. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.73891 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23044 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% JEFFAMINE M-600, MES PH 6.5, 50 MM REMARK 280 CSCL, PH 6.50, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.53933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.26967 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 68.53933 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.26967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -30 REMARK 465 ARG A -29 REMARK 465 ASN A -28 REMARK 465 GLY A -27 REMARK 465 ARG A -26 REMARK 465 THR A -25 REMARK 465 LEU A -24 REMARK 465 LEU A -23 REMARK 465 ARG A -22 REMARK 465 TRP A -21 REMARK 465 ALA A -20 REMARK 465 GLY A -19 REMARK 465 VAL A -18 REMARK 465 LEU A -17 REMARK 465 ALA A -16 REMARK 465 ALA A -15 REMARK 465 THR A -14 REMARK 465 ALA A -13 REMARK 465 ILE A -12 REMARK 465 ILE A -11 REMARK 465 GLY A -10 REMARK 465 VAL A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 PHE A -6 REMARK 465 TRP A -5 REMARK 465 SER A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 THR A -1 REMARK 465 THR A 0 REMARK 465 LYS A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 GLY A 6 REMARK 465 PRO A 7 REMARK 465 GLY A 8 REMARK 465 GLU A 9 REMARK 465 ALA A 513 REMARK 465 LYS A 514 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 144 CG CD OE1 NE2 REMARK 470 ARG A 512 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2056 O HOH A 2058 1.76 REMARK 500 O ASP A 476 O ARG A 477 1.76 REMARK 500 OD1 ASP A 69 O HOH A 2016 1.88 REMARK 500 CE1 HIS A 282 FE HEC A 609 2.07 REMARK 500 SG CYS A 508 CAC HEC A 616 2.10 REMARK 500 OD1 ASP A 476 O HOH A 2126 2.10 REMARK 500 SG CYS A 321 CAC HEC A 610 2.10 REMARK 500 SG CYS A 449 CAC HEC A 613 2.10 REMARK 500 SG CYS A 280 CAC HEC A 608 2.12 REMARK 500 O HOH A 2067 O HOH A 2068 2.13 REMARK 500 O LYS A 111 N SER A 113 2.14 REMARK 500 NH1 ARG A 172 O1D HEC A 604 2.18 REMARK 500 SG CYS A 107 CAC HEC A 603 2.18 REMARK 500 O PHE A 357 O HOH A 2092 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2028 O HOH A 2136 4675 0.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 31 CB VAL A 31 CG1 0.146 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 69 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP A 101 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 155 CB - CG - OD2 ANGL. DEV. = 8.6 DEGREES REMARK 500 ASP A 181 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 GLY A 237 C - N - CA ANGL. DEV. = -18.3 DEGREES REMARK 500 ASP A 240 CB - CG - OD2 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP A 266 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 278 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 286 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 CYS A 291 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 LYS A 301 C - N - CA ANGL. DEV. = -16.0 DEGREES REMARK 500 ASP A 313 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 358 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 LEU A 370 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG A 386 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 394 CB - CG - OD2 ANGL. DEV. = 8.2 DEGREES REMARK 500 ASP A 507 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 CYS A 508 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 -158.86 -129.93 REMARK 500 PRO A 112 83.29 -31.24 REMARK 500 ALA A 114 -121.87 -158.36 REMARK 500 ALA A 115 39.40 90.54 REMARK 500 ASP A 181 -60.44 38.24 REMARK 500 LYS A 205 29.72 40.99 REMARK 500 GLU A 230 41.68 -84.91 REMARK 500 ARG A 236 -127.08 -103.87 REMARK 500 LYS A 250 -52.59 -28.36 REMARK 500 ASP A 251 69.01 -105.45 REMARK 500 PRO A 253 -33.41 -36.39 REMARK 500 ARG A 254 -60.15 -96.28 REMARK 500 GLU A 255 12.19 85.15 REMARK 500 MET A 256 132.91 -32.82 REMARK 500 LYS A 257 -91.07 -53.59 REMARK 500 ASP A 276 -175.21 -177.92 REMARK 500 ASP A 286 -170.77 173.44 REMARK 500 LYS A 301 59.88 -111.62 REMARK 500 LYS A 342 28.81 45.56 REMARK 500 LYS A 409 -81.29 -165.77 REMARK 500 CYS A 465 51.31 -153.39 REMARK 500 LYS A 468 171.80 -49.48 REMARK 500 ASP A 473 -98.75 -97.40 REMARK 500 ARG A 477 172.50 5.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2012 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A2014 DISTANCE = 6.77 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 35 NE2 REMARK 620 2 HEC A 601 NA 92.5 REMARK 620 3 HEC A 601 NB 87.7 91.9 REMARK 620 4 HEC A 601 NC 89.6 174.3 93.6 REMARK 620 5 HEC A 601 ND 92.4 87.2 179.1 87.3 REMARK 620 6 HIS A 53 NE2 166.1 98.9 84.0 79.8 96.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 HEC A 602 NA 91.5 REMARK 620 3 HEC A 602 NB 91.3 88.2 REMARK 620 4 HEC A 602 NC 88.6 177.5 89.3 REMARK 620 5 HEC A 602 ND 89.4 93.5 178.1 89.0 REMARK 620 6 HIS A 87 NE2 173.1 94.6 85.8 85.2 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 603 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 80 NE2 REMARK 620 2 HEC A 603 NA 94.0 REMARK 620 3 HEC A 603 NB 96.7 87.4 REMARK 620 4 HEC A 603 NC 85.9 179.3 91.9 REMARK 620 5 HEC A 603 ND 83.3 93.0 179.6 87.7 REMARK 620 6 HIS A 108 NE2 178.2 87.2 82.1 92.9 97.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 604 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 128 NE2 REMARK 620 2 HEC A 604 NA 90.6 REMARK 620 3 HEC A 604 NB 95.5 89.3 REMARK 620 4 HEC A 604 NC 98.2 170.8 87.1 REMARK 620 5 HEC A 604 ND 89.1 90.1 175.4 92.8 REMARK 620 6 HIS A 151 NE2 175.4 87.4 80.3 83.6 95.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 606 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 131 NE2 REMARK 620 2 HEC A 606 NA 84.8 REMARK 620 3 HEC A 606 NB 96.4 90.9 REMARK 620 4 HEC A 606 NC 94.1 175.7 93.4 REMARK 620 5 HEC A 606 ND 83.3 88.2 179.0 87.6 REMARK 620 6 HIS A 198 NE2 173.0 88.5 86.0 92.4 94.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 152 NE2 REMARK 620 2 HEC A 605 NA 95.0 REMARK 620 3 HEC A 605 NB 98.8 100.4 REMARK 620 4 HEC A 605 NC 90.7 173.4 82.1 REMARK 620 5 HEC A 605 ND 82.3 84.1 175.3 93.4 REMARK 620 6 HIS A 175 NE2 178.2 85.8 82.7 88.5 96.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 607 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 191 NE2 REMARK 620 2 HEC A 607 NA 95.1 REMARK 620 3 HEC A 607 NB 94.7 88.9 REMARK 620 4 HEC A 607 NC 90.2 174.1 93.1 REMARK 620 5 HEC A 607 ND 83.9 89.4 177.7 88.7 REMARK 620 6 HIS A 217 NE2 168.6 96.3 85.2 78.4 96.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 608 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 267 NE2 REMARK 620 2 HEC A 608 NA 86.0 REMARK 620 3 HEC A 608 NB 89.3 82.3 REMARK 620 4 HEC A 608 NC 93.2 178.2 99.3 REMARK 620 5 HEC A 608 ND 89.0 97.9 178.2 80.5 REMARK 620 6 HIS A 281 NE2 167.6 100.8 81.6 80.3 100.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 610 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 270 NE2 REMARK 620 2 HEC A 610 NA 93.3 REMARK 620 3 HEC A 610 NB 91.4 99.7 REMARK 620 4 HEC A 610 NC 87.9 177.6 82.3 REMARK 620 5 HEC A 610 ND 84.6 85.5 173.7 92.6 REMARK 620 6 HIS A 322 NE2 171.0 93.2 93.6 85.4 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 609 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 282 NE2 REMARK 620 2 HEC A 609 NA 94.1 REMARK 620 3 HEC A 609 NB 104.2 94.0 REMARK 620 4 HEC A 609 NC 90.8 173.5 80.7 REMARK 620 5 HEC A 609 ND 77.4 89.5 176.0 95.7 REMARK 620 6 HIS A 292 NE2 169.0 93.2 83.5 82.6 94.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 612 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 310 NE2 REMARK 620 2 HEC A 612 NA 105.2 REMARK 620 3 HEC A 612 NB 85.9 91.8 REMARK 620 4 HEC A 612 NC 79.2 174.3 92.1 REMARK 620 5 HEC A 612 ND 93.6 88.0 179.4 88.1 REMARK 620 6 HIS A 351 NE2 161.3 88.6 81.1 87.9 99.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 611 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 335 NE2 REMARK 620 2 HEC A 611 NA 95.2 REMARK 620 3 HEC A 611 NB 84.5 79.3 REMARK 620 4 HEC A 611 NC 85.9 177.0 98.1 REMARK 620 5 HEC A 611 ND 96.0 97.9 177.2 84.7 REMARK 620 6 HIS A 439 NE2 179.1 85.3 94.8 93.6 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 613 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 418 NE2 REMARK 620 2 HEC A 613 NA 102.9 REMARK 620 3 HEC A 613 NB 103.1 90.7 REMARK 620 4 HEC A 613 NC 79.8 176.8 86.9 REMARK 620 5 HEC A 613 ND 79.5 91.4 176.2 90.8 REMARK 620 6 HIS A 450 NE2 165.5 88.7 85.2 88.9 91.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 614 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 451 NE2 REMARK 620 2 HEC A 614 NA 85.1 REMARK 620 3 HEC A 614 NB 97.5 96.7 REMARK 620 4 HEC A 614 NC 93.6 177.7 81.5 REMARK 620 5 HEC A 614 ND 82.5 84.8 178.5 97.0 REMARK 620 6 HIS A 466 NE2 172.9 87.9 85.0 93.4 95.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 616 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 485 NE2 REMARK 620 2 HEC A 616 NA 88.9 REMARK 620 3 HEC A 616 NB 98.6 92.5 REMARK 620 4 HEC A 616 NC 90.9 175.7 83.3 REMARK 620 5 HEC A 616 ND 80.5 85.3 177.7 98.9 REMARK 620 6 HIS A 509 NE2 162.8 93.8 98.2 87.7 82.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 615 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 492 NE2 REMARK 620 2 HEC A 615 NA 96.2 REMARK 620 3 HEC A 615 NB 100.3 89.9 REMARK 620 4 HEC A 615 NC 95.1 168.7 87.7 REMARK 620 5 HEC A 615 ND 91.6 89.6 168.0 90.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 616 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H29 RELATED DB: PDB REMARK 900 SULFATE RESPIRATION IN DESULFOVIBRIO VULGARIS HILDENBOROUGH: REMARK 900 STRUCTURE OF THE 16-HEME CYTOCHROME C HMCA AT 2.5 A RESOLUTION AND REMARK 900 A VIEW OF ITS ROLE IN TRANSMEMBRANE ELECTRON TRANSFER DBREF 1GWS A -30 514 UNP P24092 HMWC_DESVH 1 545 SEQRES 1 A 545 MET ARG ASN GLY ARG THR LEU LEU ARG TRP ALA GLY VAL SEQRES 2 A 545 LEU ALA ALA THR ALA ILE ILE GLY VAL GLY GLY PHE TRP SEQRES 3 A 545 SER GLN GLY THR THR LYS ALA LEU PRO GLU GLY PRO GLY SEQRES 4 A 545 GLU LYS ARG ALA ASP LEU ILE GLU ILE GLY ALA MET GLU SEQRES 5 A 545 ARG PHE GLY LYS LEU ASP LEU PRO LYS VAL ALA PHE ARG SEQRES 6 A 545 HIS ASP GLN HIS THR THR ALA VAL THR GLY MET GLY LYS SEQRES 7 A 545 ASP CYS ALA ALA CYS HIS LYS SER LYS ASP GLY LYS MET SEQRES 8 A 545 SER LEU LYS PHE MET ARG LEU ASP ASP ASN SER ALA ALA SEQRES 9 A 545 GLU LEU LYS GLU ILE TYR HIS ALA ASN CYS ILE GLY CYS SEQRES 10 A 545 HIS THR ASP LEU ALA LYS ALA GLY LYS LYS THR GLY PRO SEQRES 11 A 545 GLN ASP GLY GLU CYS ARG SER CYS HIS ASN PRO LYS PRO SEQRES 12 A 545 SER ALA ALA SER SER TRP LYS GLU ILE GLY PHE ASP LYS SEQRES 13 A 545 SER LEU HIS TYR ARG HIS VAL ALA SER LYS ALA ILE LYS SEQRES 14 A 545 PRO VAL GLY ASP PRO GLN LYS ASN CYS GLY ALA CYS HIS SEQRES 15 A 545 HIS VAL TYR ASP GLU ALA SER LYS LYS LEU VAL TRP GLY SEQRES 16 A 545 LYS ASN LYS GLU ASP SER CYS ARG ALA CYS HIS GLY GLU SEQRES 17 A 545 LYS PRO VAL ASP LYS ARG PRO ALA LEU ASP THR ALA ALA SEQRES 18 A 545 HIS THR ALA CYS ILE SER CYS HIS MET ASP VAL ALA LYS SEQRES 19 A 545 THR LYS ALA GLU THR GLY PRO VAL ASN CYS ALA GLY CYS SEQRES 20 A 545 HIS ALA PRO GLU ALA GLN ALA LYS PHE LYS VAL VAL ARG SEQRES 21 A 545 GLU VAL PRO ARG LEU ASP ARG GLY GLN PRO ASP ALA ALA SEQRES 22 A 545 LEU ILE LEU PRO VAL PRO GLY LYS ASP ALA PRO ARG GLU SEQRES 23 A 545 MET LYS GLY THR MET LYS PRO VAL ALA PHE ASP HIS LYS SEQRES 24 A 545 ALA HIS GLU ALA LYS ALA ASN ASP CYS ARG THR CYS HIS SEQRES 25 A 545 HIS VAL ARG ILE ASP THR CYS THR ALA CYS HIS THR VAL SEQRES 26 A 545 ASN GLY THR ALA ASP SER LYS PHE VAL GLN LEU GLU LYS SEQRES 27 A 545 ALA MET HIS GLN PRO ASP SER MET ARG SER CYS VAL GLY SEQRES 28 A 545 CYS HIS ASN THR ARG VAL GLN GLN PRO THR CYS ALA GLY SEQRES 29 A 545 CYS HIS GLY PHE ILE LYS PRO THR LYS SER ASP ALA GLN SEQRES 30 A 545 CYS GLY VAL CYS HIS VAL ALA ALA PRO GLY PHE ASP ALA SEQRES 31 A 545 LYS GLN VAL GLU ALA GLY ALA LEU LEU ASN LEU LYS ALA SEQRES 32 A 545 GLU GLN ARG SER GLN VAL ALA ALA SER MET LEU SER ALA SEQRES 33 A 545 ARG PRO GLN PRO LYS GLY THR PHE ASP LEU ASN ASP ILE SEQRES 34 A 545 PRO GLU LYS VAL VAL ILE GLY SER ILE ALA LYS GLU TYR SEQRES 35 A 545 GLN PRO SER GLU PHE PRO HIS ARG LYS ILE VAL LYS THR SEQRES 36 A 545 LEU ILE ALA GLY ILE GLY GLU ASP LYS LEU ALA ALA THR SEQRES 37 A 545 PHE HIS ILE GLU LYS GLY THR LEU CYS GLN GLY CYS HIS SEQRES 38 A 545 HIS ASN SER PRO ALA SER LEU THR PRO PRO LYS CYS ALA SEQRES 39 A 545 SER CYS HIS GLY LYS PRO PHE ASP ALA ASP ARG GLY ASP SEQRES 40 A 545 ARG PRO GLY LEU LYS ALA ALA TYR HIS GLN GLN CYS MET SEQRES 41 A 545 GLY CYS HIS ASP ARG MET LYS ILE GLU LYS PRO ALA ASN SEQRES 42 A 545 THR ALA CYS VAL ASP CYS HIS LYS GLU ARG ALA LYS HET HEC A 601 43 HET HEC A 602 43 HET HEC A 603 43 HET HEC A 604 43 HET HEC A 605 43 HET HEC A 606 43 HET HEC A 607 43 HET HEC A 608 43 HET HEC A 609 43 HET HEC A 610 43 HET HEC A 611 43 HET HEC A 612 43 HET HEC A 613 43 HET HEC A 614 43 HET HEC A 615 43 HET HEC A 616 43 HETNAM HEC HEME C FORMUL 2 HEC 16(C34 H34 FE N4 O4) FORMUL 18 HOH *151(H2 O) HELIX 1 1 GLY A 18 GLY A 24 5 7 HELIX 2 2 HIS A 35 GLY A 44 1 10 HELIX 3 3 ASP A 48 CYS A 52 5 5 HELIX 4 4 SER A 71 ALA A 93 1 23 HELIX 5 5 GLU A 103 HIS A 108 1 6 HELIX 6 6 ASP A 124 ALA A 133 1 10 HELIX 7 7 ASN A 146 CYS A 150 5 5 HELIX 8 8 SER A 170 CYS A 174 5 5 HELIX 9 9 ALA A 185 LYS A 203 1 19 HELIX 10 10 ASN A 212 ALA A 218 1 7 HELIX 11 11 ALA A 218 PHE A 225 1 8 HELIX 12 12 HIS A 267 ALA A 274 1 8 HELIX 13 13 GLN A 304 GLN A 311 1 8 HELIX 14 14 SER A 317 VAL A 326 1 10 HELIX 15 15 GLN A 328 GLY A 336 1 9 HELIX 16 16 SER A 343 GLY A 348 1 6 HELIX 17 17 ASP A 358 VAL A 362 5 5 HELIX 18 18 GLU A 363 ASN A 369 1 7 HELIX 19 19 LYS A 371 ALA A 385 1 15 HELIX 20 20 ASP A 394 ILE A 398 5 5 HELIX 21 21 PRO A 417 GLY A 430 1 14 HELIX 22 22 ASP A 432 HIS A 439 1 8 HELIX 23 23 THR A 444 CYS A 449 5 6 HELIX 24 24 LYS A 461 HIS A 466 5 6 HELIX 25 25 GLY A 479 MET A 495 1 17 HELIX 26 26 ALA A 504 CYS A 508 5 5 SHEET 1 AA 2 LEU A 14 ILE A 17 0 SHEET 2 AA 2 VAL A 31 ARG A 34 -1 O VAL A 31 N ILE A 17 SHEET 1 AB 2 SER A 55 LYS A 56 0 SHEET 2 AB 2 LYS A 59 MET A 60 -1 O LYS A 59 N LYS A 56 SHEET 1 AC 2 VAL A 153 ASP A 155 0 SHEET 2 AC 2 LYS A 160 VAL A 162 -1 O LYS A 160 N ASP A 155 SHEET 1 AD 2 ALA A 241 ILE A 244 0 SHEET 2 AD 2 VAL A 263 ASP A 266 -1 O VAL A 263 N ILE A 244 SHEET 1 AE 2 VAL A 402 ILE A 404 0 SHEET 2 AE 2 SER A 414 PHE A 416 -1 O SER A 414 N ILE A 404 LINK SG CYS A 49 CAB HEC A 601 1555 1555 1.74 LINK SG CYS A 83 CAB HEC A 602 1555 1555 2.01 LINK SG CYS A 86 CAC HEC A 602 1555 1555 2.01 LINK SG CYS A 104 CAB HEC A 603 1555 1555 1.78 LINK SG CYS A 147 CAB HEC A 604 1555 1555 2.01 LINK SG CYS A 171 CAB HEC A 605 1555 1555 1.78 LINK SG CYS A 174 CAC HEC A 605 1555 1555 2.02 LINK SG CYS A 194 CAB HEC A 606 1555 1555 1.80 LINK SG CYS A 197 CAC HEC A 606 1555 1555 2.04 LINK SG CYS A 213 CAB HEC A 607 1555 1555 1.97 LINK SG CYS A 277 CAB HEC A 608 1555 1555 1.96 LINK SG CYS A 288 CAB HEC A 609 1555 1555 1.90 LINK SG CYS A 291 CAC HEC A 609 1555 1555 1.83 LINK SG CYS A 318 CAB HEC A 610 1555 1555 1.77 LINK SG CYS A 331 CAB HEC A 611 1555 1555 1.83 LINK SG CYS A 334 CAC HEC A 611 1555 1555 1.77 LINK SG CYS A 347 CAB HEC A 612 1555 1555 1.91 LINK SG CYS A 350 CAC HEC A 612 1555 1555 2.03 LINK SG CYS A 446 CAB HEC A 613 1555 1555 1.83 LINK SG CYS A 462 CAB HEC A 614 1555 1555 1.79 LINK SG CYS A 488 CAB HEC A 615 1555 1555 1.96 LINK SG CYS A 491 CAC HEC A 615 1555 1555 1.89 LINK SG CYS A 505 CAB HEC A 616 1555 1555 1.95 LINK NE2 HIS A 35 FE HEC A 601 1555 1555 2.01 LINK NE2 HIS A 38 FE HEC A 602 1555 1555 1.83 LINK NE2 HIS A 53 FE HEC A 601 1555 1555 2.01 LINK NE2 HIS A 80 FE HEC A 603 1555 1555 1.80 LINK NE2 HIS A 87 FE HEC A 602 1555 1555 2.05 LINK NE2 HIS A 108 FE HEC A 603 1555 1555 1.96 LINK NE2 HIS A 128 FE HEC A 604 1555 1555 1.95 LINK NE2 HIS A 131 FE HEC A 606 1555 1555 2.02 LINK NE2 HIS A 151 FE HEC A 604 1555 1555 1.89 LINK NE2 HIS A 152 FE HEC A 605 1555 1555 1.79 LINK NE2 HIS A 175 FE HEC A 605 1555 1555 1.86 LINK NE2 HIS A 191 FE HEC A 607 1555 1555 1.89 LINK NE2 HIS A 198 FE HEC A 606 1555 1555 2.09 LINK NE2 HIS A 217 FE HEC A 607 1555 1555 1.93 LINK NE2 HIS A 267 FE HEC A 608 1555 1555 1.92 LINK NE2 HIS A 270 FE HEC A 610 1555 1555 1.90 LINK NE2 HIS A 281 FE HEC A 608 1555 1555 2.03 LINK NE2 HIS A 282 FE HEC A 609 1555 1555 2.32 LINK NE2 HIS A 292 FE HEC A 609 1555 1555 1.78 LINK NE2 HIS A 310 FE HEC A 612 1555 1555 1.79 LINK NE2 HIS A 322 FE HEC A 610 1555 1555 2.06 LINK NE2 HIS A 335 FE HEC A 611 1555 1555 1.87 LINK NE2 HIS A 351 FE HEC A 612 1555 1555 1.99 LINK NE2 HIS A 418 FE HEC A 613 1555 1555 1.79 LINK NE2 HIS A 439 FE HEC A 611 1555 1555 1.81 LINK NE2 HIS A 450 FE HEC A 613 1555 1555 2.06 LINK NE2 HIS A 451 FE HEC A 614 1555 1555 1.92 LINK NE2 HIS A 466 FE HEC A 614 1555 1555 1.71 LINK NE2 HIS A 485 FE HEC A 616 1555 1555 1.92 LINK NE2 HIS A 492 FE HEC A 615 1555 1555 2.13 LINK NE2 HIS A 509 FE HEC A 616 1555 1555 1.81 CISPEP 1 LYS A 499 PRO A 500 0 -3.20 SITE 1 AC1 14 PHE A 33 ARG A 34 GLN A 37 HIS A 38 SITE 2 AC1 14 PHE A 64 ASN A 82 CYS A 83 CYS A 86 SITE 3 AC1 14 HIS A 87 LEU A 90 LYS A 96 GLY A 98 SITE 4 AC1 14 PRO A 99 HOH A2141 SITE 1 AC2 18 GLY A 122 PHE A 123 HIS A 128 HIS A 131 SITE 2 AC2 18 ASN A 146 CYS A 147 CYS A 150 HIS A 151 SITE 3 AC2 18 GLU A 168 SER A 170 ARG A 172 LEU A 234 SITE 4 AC2 18 ARG A 236 ASP A 276 CYS A 277 ARG A 278 SITE 5 AC2 18 ILE A 285 HEC A 606 SITE 1 AC3 16 HIS A 35 TRP A 118 GLU A 120 ILE A 121 SITE 2 AC3 16 ARG A 172 LEU A 186 ALA A 190 HIS A 191 SITE 3 AC3 16 HIS A 198 PRO A 210 VAL A 211 ASN A 212 SITE 4 AC3 16 CYS A 213 CYS A 216 HIS A 217 HEC A 601 SITE 1 AC4 15 GLN A 238 PHE A 265 HIS A 267 ALA A 274 SITE 2 AC4 15 ASP A 276 CYS A 277 CYS A 280 HIS A 281 SITE 3 AC4 15 ILE A 285 ASP A 286 THR A 287 CYS A 288 SITE 4 AC4 15 HEC A 610 HOH A2146 HOH A2147 SITE 1 AC5 13 PHE A 33 HIS A 35 CYS A 49 CYS A 52 SITE 2 AC5 13 HIS A 53 LEU A 62 LYS A 63 PHE A 64 SITE 3 AC5 13 ARG A 66 TYR A 79 HIS A 191 HEC A 607 SITE 4 AC5 13 HOH A2140 SITE 1 AC6 14 ILE A 17 GLY A 18 ALA A 19 MET A 20 SITE 2 AC6 14 LEU A 26 ASP A 27 LEU A 28 TYR A 79 SITE 3 AC6 14 HIS A 80 GLN A 100 ASP A 101 CYS A 104 SITE 4 AC6 14 CYS A 107 HIS A 108 SITE 1 AC7 10 LYS A 59 HIS A 152 TYR A 154 SER A 170 SITE 2 AC7 10 CYS A 171 CYS A 174 HIS A 175 LYS A 182 SITE 3 AC7 10 ALA A 193 HOH A2142 SITE 1 AC8 15 PHE A 123 ARG A 130 HIS A 131 CYS A 150 SITE 2 AC8 15 CYS A 194 CYS A 197 HIS A 198 GLU A 207 SITE 3 AC8 15 THR A 208 GLY A 209 PRO A 210 PHE A 225 SITE 4 AC8 15 HEC A 604 HOH A2143 HOH A2144 SITE 1 AC9 14 CYS A 280 HIS A 282 ARG A 284 THR A 287 SITE 2 AC9 14 CYS A 288 CYS A 291 HIS A 292 ASP A 299 SITE 3 AC9 14 SER A 300 LYS A 301 ALA A 308 GLN A 311 SITE 4 AC9 14 SER A 314 ARG A 316 SITE 1 BC1 17 PHE A 265 ASP A 266 HIS A 270 LYS A 273 SITE 2 BC1 17 MET A 315 ARG A 316 SER A 317 CYS A 318 SITE 3 BC1 17 CYS A 321 HIS A 322 ARG A 386 LYS A 433 SITE 4 BC1 17 LEU A 434 THR A 437 HEC A 608 HEC A 612 SITE 5 BC1 17 HOH A2071 SITE 1 BC2 14 CYS A 331 CYS A 334 HIS A 335 PRO A 340 SITE 2 BC2 14 THR A 341 GLN A 346 ASP A 432 PHE A 438 SITE 3 BC2 14 HIS A 439 THR A 444 LEU A 445 GLN A 447 SITE 4 BC2 14 HOH A2149 HOH A2151 SITE 1 BC3 17 GLU A 230 ILE A 244 LEU A 245 PRO A 246 SITE 2 BC3 17 THR A 259 MET A 260 LYS A 261 PRO A 262 SITE 3 BC3 17 VAL A 263 LEU A 305 GLU A 306 MET A 309 SITE 4 BC3 17 HIS A 310 CYS A 347 CYS A 350 HIS A 351 SITE 5 BC3 17 HEC A 610 SITE 1 BC4 15 ILE A 398 PHE A 416 HIS A 418 VAL A 422 SITE 2 BC4 15 CYS A 446 CYS A 449 HIS A 450 SER A 456 SITE 3 BC4 15 LEU A 457 PRO A 459 LYS A 461 CYS A 462 SITE 4 BC4 15 TYR A 484 HEC A 615 HOH A2131 SITE 1 BC5 14 PHE A 337 LYS A 339 CYS A 449 HIS A 451 SITE 2 BC5 14 ASN A 452 CYS A 462 SER A 464 CYS A 465 SITE 3 BC5 14 HIS A 466 ARG A 477 PRO A 478 ALA A 483 SITE 4 BC5 14 GLN A 486 GLN A 487 SITE 1 BC6 11 ILE A 404 SER A 414 PHE A 416 LYS A 420 SITE 2 BC6 11 ILE A 421 GLN A 487 CYS A 488 CYS A 491 SITE 3 BC6 11 HIS A 492 PRO A 500 HEC A 613 SITE 1 BC7 18 THR A 88 GLN A 100 ILE A 404 GLY A 405 SITE 2 BC7 18 SER A 406 ILE A 407 ALA A 408 LYS A 409 SITE 3 BC7 18 GLU A 410 TYR A 411 LYS A 481 TYR A 484 SITE 4 BC7 18 HIS A 485 CYS A 488 ASN A 502 CYS A 505 SITE 5 BC7 18 CYS A 508 HIS A 509 CRYST1 108.386 108.386 102.809 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009226 0.005327 0.000000 0.00000 SCALE2 0.000000 0.010653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009727 0.00000