HEADER DEHYDROGENASE 16-MAY-02 1GZ6 TITLE (3R)-HYDROXYACYL-COA DEHYDROGENASE FRAGMENT OF RAT PEROXISOMAL TITLE 2 MULTIFUNCTIONAL ENZYME TYPE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTRADIOL 17 BETA-DEHYDROGENASE 4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: (3R)-HYDROXYACYL-COA DEHYDROGENASE FRAGMENT, RESIDUES 1- COMPND 5 319; COMPND 6 SYNONYM: 17-BETA-HSD 4,17-BETA-HYDROXYSTEROID DEHYDROGENASE, HSD COMPND 7 IV17-BETA-HSD 4; COMPND 8 EC: 1.1.1.62; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: LIVER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-3D; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3D/DHDELTASCP-2LDELTA KEYWDS DEHYDROGENASE, 17BETA-HSD4, MFE-2, BETA-OXIDATION, PEROXISOME, SDR, KEYWDS 2 STEROID BIOSYNTHESIS, OXIDOREDUCTASE, NADP, MULTIGENE FAMIL EXPDTA X-RAY DIFFRACTION AUTHOR A.M.HAAPALAINEN,J.K.HILTUNEN,T.GLUMOFF REVDAT 3 06-NOV-24 1GZ6 1 LINK REVDAT 2 24-FEB-09 1GZ6 1 VERSN REVDAT 1 24-JAN-03 1GZ6 0 JRNL AUTH A.M.HAAPALAINEN,M.K.KOSKI,Y.M.QIN,J.K.HILTUNEN,T.GLUMOFF JRNL TITL BINARY STRUCTURE OF THE TWO-DOMAIN (3R)-HYDROXYACYL-COA JRNL TITL 2 DEHYDROGENASE FROM RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME JRNL TITL 3 TYPE 2 AT 2.38 A RESOLUTION JRNL REF STRUCTURE V. 11 87 2003 JRNL REFN ISSN 0969-2126 JRNL PMID 12517343 JRNL DOI 10.1016/S0969-2126(02)00931-0 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 55603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2809 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8510 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 457 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8943 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 201 REMARK 3 SOLVENT ATOMS : 817 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.55000 REMARK 3 B22 (A**2) : -11.36000 REMARK 3 B33 (A**2) : 2.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.950 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 69.12 REMARK 3 REMARK 3 NCS MODEL : CONSTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NAI_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NAI_XPLOR_TOP.TXT REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GZ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1290009853. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979578,0.979269,0.972433 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55717 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21 % PEG 6000, 0.2 M LITHIUM SULFATE REMARK 280 0.1 M NA-CACODYLATE, PH 5.5, 10 MM NAD+, 0.23 MM TRITON X-100, REMARK 280 PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.37400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 305 REMARK 465 GLY A 306 REMARK 465 ILE A 307 REMARK 465 SER A 308 REMARK 465 GLN A 309 REMARK 465 ASN A 310 REMARK 465 HIS A 311 REMARK 465 THR A 312 REMARK 465 GLY A 313 REMARK 465 GLN A 314 REMARK 465 VAL A 315 REMARK 465 ALA A 316 REMARK 465 SER A 317 REMARK 465 ALA A 318 REMARK 465 ASP A 319 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 44 REMARK 465 PHE B 45 REMARK 465 LYS B 46 REMARK 465 GLY B 47 REMARK 465 VAL B 48 REMARK 465 GLY B 49 REMARK 465 LYS B 50 REMARK 465 GLY B 51 REMARK 465 ALA B 196 REMARK 465 GLY B 197 REMARK 465 SER B 198 REMARK 465 ARG B 199 REMARK 465 MSE B 200 REMARK 465 THR B 201 REMARK 465 GLU B 202 REMARK 465 THR B 203 REMARK 465 VAL B 204 REMARK 465 MSE B 205 REMARK 465 PRO B 206 REMARK 465 GLU B 207 REMARK 465 ASP B 208 REMARK 465 LEU B 209 REMARK 465 VAL B 210 REMARK 465 GLU B 305 REMARK 465 GLY B 306 REMARK 465 ILE B 307 REMARK 465 SER B 308 REMARK 465 GLN B 309 REMARK 465 ASN B 310 REMARK 465 HIS B 311 REMARK 465 THR B 312 REMARK 465 GLY B 313 REMARK 465 GLN B 314 REMARK 465 VAL B 315 REMARK 465 ALA B 316 REMARK 465 SER B 317 REMARK 465 ALA B 318 REMARK 465 ASP B 319 REMARK 465 MSE C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 GLY C 51 REMARK 465 ALA C 196 REMARK 465 GLY C 197 REMARK 465 SER C 198 REMARK 465 ARG C 199 REMARK 465 MSE C 200 REMARK 465 THR C 201 REMARK 465 GLU C 202 REMARK 465 THR C 203 REMARK 465 VAL C 204 REMARK 465 MSE C 205 REMARK 465 PRO C 206 REMARK 465 GLU C 207 REMARK 465 GLU C 305 REMARK 465 GLY C 306 REMARK 465 ILE C 307 REMARK 465 SER C 308 REMARK 465 GLN C 309 REMARK 465 ASN C 310 REMARK 465 HIS C 311 REMARK 465 THR C 312 REMARK 465 GLY C 313 REMARK 465 GLN C 314 REMARK 465 VAL C 315 REMARK 465 ALA C 316 REMARK 465 SER C 317 REMARK 465 ALA C 318 REMARK 465 ASP C 319 REMARK 465 MSE D 1 REMARK 465 ALA D 2 REMARK 465 GLU D 305 REMARK 465 GLY D 306 REMARK 465 ILE D 307 REMARK 465 SER D 308 REMARK 465 GLN D 309 REMARK 465 ASN D 310 REMARK 465 HIS D 311 REMARK 465 THR D 312 REMARK 465 GLY D 313 REMARK 465 GLN D 314 REMARK 465 VAL D 315 REMARK 465 ALA D 316 REMARK 465 SER D 317 REMARK 465 ALA D 318 REMARK 465 ASP D 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 304 CA C O CB OG REMARK 470 SER B 304 CA C O CB OG REMARK 470 SER C 304 CA C O CB OG REMARK 470 SER D 304 CA C O CB OG REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 46 CD CE NZ REMARK 480 LYS A 57 CE NZ REMARK 480 ARG A 64 CD NE CZ NH1 NH2 REMARK 480 GLU A 80 CD OE1 OE2 REMARK 480 LYS A 140 CG CD CE NZ REMARK 480 GLU A 202 CD OE1 OE2 REMARK 480 THR A 203 OG1 CG2 REMARK 480 VAL A 204 CG1 CG2 REMARK 480 LYS A 259 CD CE NZ REMARK 480 ARG A 260 CG CD NE CZ NH1 NH2 REMARK 480 ASN A 261 CG OD1 ND2 REMARK 480 GLN A 262 CB CG CD OE1 NE2 REMARK 480 LYS A 286 CE NZ REMARK 480 GLU A 297 CD OE1 OE2 REMARK 480 LYS A 301 CB CG CD CE NZ REMARK 480 ASP A 303 CG OD1 OD2 REMARK 480 LYS B 57 CD CE NZ REMARK 480 GLU B 60 CB CG CD OE1 OE2 REMARK 480 ARG B 64 NE CZ NH1 NH2 REMARK 480 ARG B 65 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 68 CD CE NZ REMARK 480 LYS B 84 CD CE NZ REMARK 480 GLU B 114 OE1 OE2 REMARK 480 LYS B 140 CG CD CE NZ REMARK 480 GLU B 211 CB CG CD OE1 OE2 REMARK 480 LYS B 259 CD CE NZ REMARK 480 LYS B 286 CE NZ REMARK 480 GLU B 290 CG CD OE1 OE2 REMARK 480 LYS B 301 NZ REMARK 480 ASP B 303 OD1 OD2 REMARK 480 ASP C 44 CG OD1 OD2 REMARK 480 LYS C 50 CE NZ REMARK 480 LYS C 57 CD CE NZ REMARK 480 ARG C 64 NE CZ NH1 NH2 REMARK 480 LYS C 68 CG CD CE NZ REMARK 480 LYS C 84 CG CD CE NZ REMARK 480 ARG C 110 CD NE CZ NH1 NH2 REMARK 480 LYS C 139 CD CE NZ REMARK 480 LYS C 140 CG CD CE NZ REMARK 480 ASN C 186 CB CG OD1 ND2 REMARK 480 ASP C 208 CB CG OD1 OD2 REMARK 480 GLU C 211 CB CG CD OE1 OE2 REMARK 480 LYS C 259 CD CE NZ REMARK 480 ASN C 261 CB CG OD1 ND2 REMARK 480 GLN C 262 CD OE1 NE2 REMARK 480 LYS C 286 CD CE NZ REMARK 480 LYS C 301 NZ REMARK 480 LYS D 46 CD CE NZ REMARK 480 LYS D 50 NZ REMARK 480 LYS D 57 CE NZ REMARK 480 ARG D 64 CD NE CZ NH1 NH2 REMARK 480 LYS D 140 CG CD CE NZ REMARK 480 GLU D 202 CG CD OE1 OE2 REMARK 480 GLU D 211 CG CD OE1 OE2 REMARK 480 ARG D 260 CB CG CD NE CZ NH1 NH2 REMARK 480 ASN D 261 CB CG OD1 ND2 REMARK 480 LYS D 286 CE NZ REMARK 480 GLU D 297 CD OE1 OE2 REMARK 480 LYS D 301 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B 70 CB VAL B 70 CG1 -0.238 REMARK 500 VAL B 70 CB VAL B 70 CG2 -0.244 REMARK 500 VAL C 70 CB VAL C 70 CG1 -0.242 REMARK 500 VAL C 70 CB VAL C 70 CG2 -0.228 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 6 NE - CZ - NH1 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 6 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 104 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 104 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 VAL B 70 CG1 - CB - CG2 ANGL. DEV. = -15.3 DEGREES REMARK 500 ARG B 121 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 121 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 132 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 132 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 VAL C 70 CG1 - CB - CG2 ANGL. DEV. = -17.8 DEGREES REMARK 500 ARG C 121 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG C 121 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG C 132 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG C 132 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG D 6 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG D 6 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG D 63 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG D 63 NE - CZ - NH2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG D 104 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG D 104 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 130.62 -171.03 REMARK 500 LYS A 50 136.14 -178.15 REMARK 500 ALA A 78 44.94 -108.93 REMARK 500 ARG A 104 64.46 -154.74 REMARK 500 ALA A 150 -149.13 -102.86 REMARK 500 ALA A 241 -3.01 59.42 REMARK 500 ASN A 261 77.57 36.96 REMARK 500 GLN A 262 101.70 -174.86 REMARK 500 LYS A 284 79.50 -117.81 REMARK 500 ASP A 303 38.74 -95.14 REMARK 500 ASP B 40 130.95 -172.62 REMARK 500 ALA B 78 39.41 -95.85 REMARK 500 ALA B 150 -153.08 -97.61 REMARK 500 ALA B 241 -0.47 61.46 REMARK 500 ASN B 261 -7.04 73.23 REMARK 500 ASP C 40 118.75 -179.05 REMARK 500 ALA C 78 38.08 -94.13 REMARK 500 ALA C 150 -153.75 -97.27 REMARK 500 LEU C 213 64.45 -100.27 REMARK 500 ASN C 261 -5.62 72.30 REMARK 500 LYS D 50 136.34 -178.42 REMARK 500 ALA D 78 45.44 -107.08 REMARK 500 ARG D 104 64.53 -154.63 REMARK 500 ALA D 150 -149.23 -102.75 REMARK 500 MSE D 200 34.31 -96.34 REMARK 500 THR D 201 -16.35 -141.40 REMARK 500 ALA D 241 -4.19 58.94 REMARK 500 ASN D 261 76.66 35.68 REMARK 500 GLN D 262 101.88 -173.45 REMARK 500 LYS D 284 78.31 -119.19 REMARK 500 ASP D 303 37.61 -92.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A2027 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH B2020 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH B2021 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH C2005 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH C2012 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH C2023 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH C2026 DISTANCE = 6.42 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A1306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI B1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI C1304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI D1305 DBREF 1GZ6 A 1 319 UNP P97852 DHB4_RAT 1 319 DBREF 1GZ6 B 1 319 UNP P97852 DHB4_RAT 1 319 DBREF 1GZ6 C 1 319 UNP P97852 DHB4_RAT 1 319 DBREF 1GZ6 D 1 319 UNP P97852 DHB4_RAT 1 319 SEQRES 1 A 319 MSE ALA SER PRO LEU ARG PHE ASP GLY ARG VAL VAL LEU SEQRES 2 A 319 VAL THR GLY ALA GLY GLY GLY LEU GLY ARG ALA TYR ALA SEQRES 3 A 319 LEU ALA PHE ALA GLU ARG GLY ALA LEU VAL VAL VAL ASN SEQRES 4 A 319 ASP LEU GLY GLY ASP PHE LYS GLY VAL GLY LYS GLY SER SEQRES 5 A 319 SER ALA ALA ASP LYS VAL VAL GLU GLU ILE ARG ARG ARG SEQRES 6 A 319 GLY GLY LYS ALA VAL ALA ASN TYR ASP SER VAL GLU ALA SEQRES 7 A 319 GLY GLU LYS LEU VAL LYS THR ALA LEU ASP THR PHE GLY SEQRES 8 A 319 ARG ILE ASP VAL VAL VAL ASN ASN ALA GLY ILE LEU ARG SEQRES 9 A 319 ASP ARG SER PHE SER ARG ILE SER ASP GLU ASP TRP ASP SEQRES 10 A 319 ILE ILE GLN ARG VAL HIS LEU ARG GLY SER PHE GLN VAL SEQRES 11 A 319 THR ARG ALA ALA TRP ASP HIS MSE LYS LYS GLN ASN TYR SEQRES 12 A 319 GLY ARG ILE ILE MSE THR ALA SER ALA SER GLY ILE TYR SEQRES 13 A 319 GLY ASN PHE GLY GLN ALA ASN TYR SER ALA ALA LYS LEU SEQRES 14 A 319 GLY LEU LEU GLY LEU ALA ASN THR LEU VAL ILE GLU GLY SEQRES 15 A 319 ARG LYS ASN ASN ILE HIS CYS ASN THR ILE ALA PRO ASN SEQRES 16 A 319 ALA GLY SER ARG MSE THR GLU THR VAL MSE PRO GLU ASP SEQRES 17 A 319 LEU VAL GLU ALA LEU LYS PRO GLU TYR VAL ALA PRO LEU SEQRES 18 A 319 VAL LEU TRP LEU CYS HIS GLU SER CYS GLU GLU ASN GLY SEQRES 19 A 319 GLY LEU PHE GLU VAL GLY ALA GLY TRP ILE GLY LYS LEU SEQRES 20 A 319 ARG TRP GLU ARG THR LEU GLY ALA ILE VAL ARG LYS ARG SEQRES 21 A 319 ASN GLN PRO MSE THR PRO GLU ALA VAL ARG ASP ASN TRP SEQRES 22 A 319 VAL LYS ILE CYS ASP PHE SER ASN ALA SER LYS PRO LYS SEQRES 23 A 319 SER ILE GLN GLU SER THR GLY GLY ILE ILE GLU VAL LEU SEQRES 24 A 319 HIS LYS ILE ASP SER GLU GLY ILE SER GLN ASN HIS THR SEQRES 25 A 319 GLY GLN VAL ALA SER ALA ASP SEQRES 1 B 319 MSE ALA SER PRO LEU ARG PHE ASP GLY ARG VAL VAL LEU SEQRES 2 B 319 VAL THR GLY ALA GLY GLY GLY LEU GLY ARG ALA TYR ALA SEQRES 3 B 319 LEU ALA PHE ALA GLU ARG GLY ALA LEU VAL VAL VAL ASN SEQRES 4 B 319 ASP LEU GLY GLY ASP PHE LYS GLY VAL GLY LYS GLY SER SEQRES 5 B 319 SER ALA ALA ASP LYS VAL VAL GLU GLU ILE ARG ARG ARG SEQRES 6 B 319 GLY GLY LYS ALA VAL ALA ASN TYR ASP SER VAL GLU ALA SEQRES 7 B 319 GLY GLU LYS LEU VAL LYS THR ALA LEU ASP THR PHE GLY SEQRES 8 B 319 ARG ILE ASP VAL VAL VAL ASN ASN ALA GLY ILE LEU ARG SEQRES 9 B 319 ASP ARG SER PHE SER ARG ILE SER ASP GLU ASP TRP ASP SEQRES 10 B 319 ILE ILE GLN ARG VAL HIS LEU ARG GLY SER PHE GLN VAL SEQRES 11 B 319 THR ARG ALA ALA TRP ASP HIS MSE LYS LYS GLN ASN TYR SEQRES 12 B 319 GLY ARG ILE ILE MSE THR ALA SER ALA SER GLY ILE TYR SEQRES 13 B 319 GLY ASN PHE GLY GLN ALA ASN TYR SER ALA ALA LYS LEU SEQRES 14 B 319 GLY LEU LEU GLY LEU ALA ASN THR LEU VAL ILE GLU GLY SEQRES 15 B 319 ARG LYS ASN ASN ILE HIS CYS ASN THR ILE ALA PRO ASN SEQRES 16 B 319 ALA GLY SER ARG MSE THR GLU THR VAL MSE PRO GLU ASP SEQRES 17 B 319 LEU VAL GLU ALA LEU LYS PRO GLU TYR VAL ALA PRO LEU SEQRES 18 B 319 VAL LEU TRP LEU CYS HIS GLU SER CYS GLU GLU ASN GLY SEQRES 19 B 319 GLY LEU PHE GLU VAL GLY ALA GLY TRP ILE GLY LYS LEU SEQRES 20 B 319 ARG TRP GLU ARG THR LEU GLY ALA ILE VAL ARG LYS ARG SEQRES 21 B 319 ASN GLN PRO MSE THR PRO GLU ALA VAL ARG ASP ASN TRP SEQRES 22 B 319 VAL LYS ILE CYS ASP PHE SER ASN ALA SER LYS PRO LYS SEQRES 23 B 319 SER ILE GLN GLU SER THR GLY GLY ILE ILE GLU VAL LEU SEQRES 24 B 319 HIS LYS ILE ASP SER GLU GLY ILE SER GLN ASN HIS THR SEQRES 25 B 319 GLY GLN VAL ALA SER ALA ASP SEQRES 1 C 319 MSE ALA SER PRO LEU ARG PHE ASP GLY ARG VAL VAL LEU SEQRES 2 C 319 VAL THR GLY ALA GLY GLY GLY LEU GLY ARG ALA TYR ALA SEQRES 3 C 319 LEU ALA PHE ALA GLU ARG GLY ALA LEU VAL VAL VAL ASN SEQRES 4 C 319 ASP LEU GLY GLY ASP PHE LYS GLY VAL GLY LYS GLY SER SEQRES 5 C 319 SER ALA ALA ASP LYS VAL VAL GLU GLU ILE ARG ARG ARG SEQRES 6 C 319 GLY GLY LYS ALA VAL ALA ASN TYR ASP SER VAL GLU ALA SEQRES 7 C 319 GLY GLU LYS LEU VAL LYS THR ALA LEU ASP THR PHE GLY SEQRES 8 C 319 ARG ILE ASP VAL VAL VAL ASN ASN ALA GLY ILE LEU ARG SEQRES 9 C 319 ASP ARG SER PHE SER ARG ILE SER ASP GLU ASP TRP ASP SEQRES 10 C 319 ILE ILE GLN ARG VAL HIS LEU ARG GLY SER PHE GLN VAL SEQRES 11 C 319 THR ARG ALA ALA TRP ASP HIS MSE LYS LYS GLN ASN TYR SEQRES 12 C 319 GLY ARG ILE ILE MSE THR ALA SER ALA SER GLY ILE TYR SEQRES 13 C 319 GLY ASN PHE GLY GLN ALA ASN TYR SER ALA ALA LYS LEU SEQRES 14 C 319 GLY LEU LEU GLY LEU ALA ASN THR LEU VAL ILE GLU GLY SEQRES 15 C 319 ARG LYS ASN ASN ILE HIS CYS ASN THR ILE ALA PRO ASN SEQRES 16 C 319 ALA GLY SER ARG MSE THR GLU THR VAL MSE PRO GLU ASP SEQRES 17 C 319 LEU VAL GLU ALA LEU LYS PRO GLU TYR VAL ALA PRO LEU SEQRES 18 C 319 VAL LEU TRP LEU CYS HIS GLU SER CYS GLU GLU ASN GLY SEQRES 19 C 319 GLY LEU PHE GLU VAL GLY ALA GLY TRP ILE GLY LYS LEU SEQRES 20 C 319 ARG TRP GLU ARG THR LEU GLY ALA ILE VAL ARG LYS ARG SEQRES 21 C 319 ASN GLN PRO MSE THR PRO GLU ALA VAL ARG ASP ASN TRP SEQRES 22 C 319 VAL LYS ILE CYS ASP PHE SER ASN ALA SER LYS PRO LYS SEQRES 23 C 319 SER ILE GLN GLU SER THR GLY GLY ILE ILE GLU VAL LEU SEQRES 24 C 319 HIS LYS ILE ASP SER GLU GLY ILE SER GLN ASN HIS THR SEQRES 25 C 319 GLY GLN VAL ALA SER ALA ASP SEQRES 1 D 319 MSE ALA SER PRO LEU ARG PHE ASP GLY ARG VAL VAL LEU SEQRES 2 D 319 VAL THR GLY ALA GLY GLY GLY LEU GLY ARG ALA TYR ALA SEQRES 3 D 319 LEU ALA PHE ALA GLU ARG GLY ALA LEU VAL VAL VAL ASN SEQRES 4 D 319 ASP LEU GLY GLY ASP PHE LYS GLY VAL GLY LYS GLY SER SEQRES 5 D 319 SER ALA ALA ASP LYS VAL VAL GLU GLU ILE ARG ARG ARG SEQRES 6 D 319 GLY GLY LYS ALA VAL ALA ASN TYR ASP SER VAL GLU ALA SEQRES 7 D 319 GLY GLU LYS LEU VAL LYS THR ALA LEU ASP THR PHE GLY SEQRES 8 D 319 ARG ILE ASP VAL VAL VAL ASN ASN ALA GLY ILE LEU ARG SEQRES 9 D 319 ASP ARG SER PHE SER ARG ILE SER ASP GLU ASP TRP ASP SEQRES 10 D 319 ILE ILE GLN ARG VAL HIS LEU ARG GLY SER PHE GLN VAL SEQRES 11 D 319 THR ARG ALA ALA TRP ASP HIS MSE LYS LYS GLN ASN TYR SEQRES 12 D 319 GLY ARG ILE ILE MSE THR ALA SER ALA SER GLY ILE TYR SEQRES 13 D 319 GLY ASN PHE GLY GLN ALA ASN TYR SER ALA ALA LYS LEU SEQRES 14 D 319 GLY LEU LEU GLY LEU ALA ASN THR LEU VAL ILE GLU GLY SEQRES 15 D 319 ARG LYS ASN ASN ILE HIS CYS ASN THR ILE ALA PRO ASN SEQRES 16 D 319 ALA GLY SER ARG MSE THR GLU THR VAL MSE PRO GLU ASP SEQRES 17 D 319 LEU VAL GLU ALA LEU LYS PRO GLU TYR VAL ALA PRO LEU SEQRES 18 D 319 VAL LEU TRP LEU CYS HIS GLU SER CYS GLU GLU ASN GLY SEQRES 19 D 319 GLY LEU PHE GLU VAL GLY ALA GLY TRP ILE GLY LYS LEU SEQRES 20 D 319 ARG TRP GLU ARG THR LEU GLY ALA ILE VAL ARG LYS ARG SEQRES 21 D 319 ASN GLN PRO MSE THR PRO GLU ALA VAL ARG ASP ASN TRP SEQRES 22 D 319 VAL LYS ILE CYS ASP PHE SER ASN ALA SER LYS PRO LYS SEQRES 23 D 319 SER ILE GLN GLU SER THR GLY GLY ILE ILE GLU VAL LEU SEQRES 24 D 319 HIS LYS ILE ASP SER GLU GLY ILE SER GLN ASN HIS THR SEQRES 25 D 319 GLY GLN VAL ALA SER ALA ASP MODRES 1GZ6 MSE A 138 MET SELENOMETHIONINE MODRES 1GZ6 MSE A 148 MET SELENOMETHIONINE MODRES 1GZ6 MSE A 200 MET SELENOMETHIONINE MODRES 1GZ6 MSE A 205 MET SELENOMETHIONINE MODRES 1GZ6 MSE A 264 MET SELENOMETHIONINE MODRES 1GZ6 MSE B 138 MET SELENOMETHIONINE MODRES 1GZ6 MSE B 148 MET SELENOMETHIONINE MODRES 1GZ6 MSE B 264 MET SELENOMETHIONINE MODRES 1GZ6 MSE C 138 MET SELENOMETHIONINE MODRES 1GZ6 MSE C 148 MET SELENOMETHIONINE MODRES 1GZ6 MSE C 264 MET SELENOMETHIONINE MODRES 1GZ6 MSE D 138 MET SELENOMETHIONINE MODRES 1GZ6 MSE D 148 MET SELENOMETHIONINE MODRES 1GZ6 MSE D 200 MET SELENOMETHIONINE MODRES 1GZ6 MSE D 205 MET SELENOMETHIONINE MODRES 1GZ6 MSE D 264 MET SELENOMETHIONINE HET MSE A 138 8 HET MSE A 148 8 HET MSE A 200 8 HET MSE A 205 8 HET MSE A 264 8 HET MSE B 138 8 HET MSE B 148 8 HET MSE B 264 8 HET MSE C 138 8 HET MSE C 148 8 HET MSE C 264 8 HET MSE D 138 8 HET MSE D 148 8 HET MSE D 200 8 HET MSE D 205 8 HET MSE D 264 8 HET SO4 A1303 5 HET SO4 A1304 5 HET SO4 A1305 5 HET NAI A1306 44 HET NAI B1304 44 HET NAI C1304 44 HET SO4 D1303 5 HET SO4 D1304 5 HET NAI D1305 44 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETSYN NAI NADH FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 SO4 5(O4 S 2-) FORMUL 8 NAI 4(C21 H29 N7 O14 P2) FORMUL 14 HOH *817(H2 O) HELIX 1 1 GLY A 19 ARG A 32 1 14 HELIX 2 2 SER A 52 ARG A 65 1 14 HELIX 3 3 SER A 75 GLU A 77 5 3 HELIX 4 4 ALA A 78 PHE A 90 1 13 HELIX 5 5 SER A 107 ILE A 111 5 5 HELIX 6 6 SER A 112 ASN A 142 1 31 HELIX 7 7 SER A 151 GLY A 157 1 7 HELIX 8 8 GLN A 161 GLY A 182 1 22 HELIX 9 9 ARG A 183 ASN A 185 5 3 HELIX 10 10 THR A 201 MSE A 205 5 5 HELIX 11 11 PRO A 206 LEU A 213 1 8 HELIX 12 12 LYS A 214 TYR A 217 5 4 HELIX 13 13 VAL A 218 CYS A 226 1 9 HELIX 14 14 THR A 265 ASN A 272 1 8 HELIX 15 15 ASN A 272 CYS A 277 1 6 HELIX 16 16 SER A 287 ASP A 303 1 17 HELIX 17 17 GLY B 19 GLU B 31 1 13 HELIX 18 18 SER B 52 ARG B 65 1 14 HELIX 19 19 SER B 75 GLU B 77 5 3 HELIX 20 20 ALA B 78 GLY B 91 1 14 HELIX 21 21 SER B 107 ILE B 111 5 5 HELIX 22 22 SER B 112 ASN B 142 1 31 HELIX 23 23 SER B 151 GLY B 157 1 7 HELIX 24 24 GLN B 161 ARG B 183 1 23 HELIX 25 25 LYS B 214 TYR B 217 5 4 HELIX 26 26 VAL B 218 CYS B 226 1 9 HELIX 27 27 THR B 265 ASN B 272 1 8 HELIX 28 28 ASN B 272 ASP B 278 1 7 HELIX 29 29 SER B 287 ASP B 303 1 17 HELIX 30 30 GLY C 19 ARG C 32 1 14 HELIX 31 31 SER C 52 GLY C 66 1 15 HELIX 32 32 SER C 75 GLU C 77 5 3 HELIX 33 33 ALA C 78 GLY C 91 1 14 HELIX 34 34 SER C 107 ILE C 111 5 5 HELIX 35 35 SER C 112 ASN C 142 1 31 HELIX 36 36 SER C 151 GLY C 157 1 7 HELIX 37 37 GLN C 161 ARG C 183 1 23 HELIX 38 38 ASP C 208 LEU C 213 1 6 HELIX 39 39 LYS C 214 TYR C 217 5 4 HELIX 40 40 VAL C 218 CYS C 226 1 9 HELIX 41 41 THR C 265 ASN C 272 1 8 HELIX 42 42 ASN C 272 ASP C 278 1 7 HELIX 43 43 SER C 287 ASP C 303 1 17 HELIX 44 44 GLY D 19 ARG D 32 1 14 HELIX 45 45 SER D 52 ARG D 65 1 14 HELIX 46 46 SER D 75 GLU D 77 5 3 HELIX 47 47 ALA D 78 PHE D 90 1 13 HELIX 48 48 SER D 107 ILE D 111 5 5 HELIX 49 49 SER D 112 ASN D 142 1 31 HELIX 50 50 SER D 151 GLY D 157 1 7 HELIX 51 51 GLN D 161 GLY D 182 1 22 HELIX 52 52 ARG D 183 ASN D 185 5 3 HELIX 53 53 THR D 201 MSE D 205 5 5 HELIX 54 54 PRO D 206 LEU D 213 1 8 HELIX 55 55 LYS D 214 TYR D 217 5 4 HELIX 56 56 VAL D 218 CYS D 226 1 9 HELIX 57 57 THR D 265 ASN D 272 1 8 HELIX 58 58 ASN D 272 CYS D 277 1 6 HELIX 59 59 SER D 287 ASP D 303 1 17 SHEET 1 AA 9 LYS A 68 ASN A 72 0 SHEET 2 AA 9 LEU A 35 ASN A 39 1 O VAL A 36 N VAL A 70 SHEET 3 AA 9 VAL A 11 VAL A 14 1 O VAL A 12 N VAL A 37 SHEET 4 AA 9 VAL A 95 ASN A 98 1 O VAL A 95 N LEU A 13 SHEET 5 AA 9 GLY A 144 THR A 149 1 O ARG A 145 N VAL A 96 SHEET 6 AA 9 ILE A 187 ASN A 195 1 O HIS A 188 N ILE A 146 SHEET 7 AA 9 LEU A 236 GLY A 240 1 O PHE A 237 N ALA A 193 SHEET 8 AA 9 TRP A 243 ARG A 251 -1 O TRP A 243 N GLY A 240 SHEET 9 AA 9 ALA B 255 ILE B 256 -1 O ALA B 255 N ILE A 244 SHEET 1 AB 9 LYS A 68 ASN A 72 0 SHEET 2 AB 9 LEU A 35 ASN A 39 1 O VAL A 36 N VAL A 70 SHEET 3 AB 9 VAL A 11 VAL A 14 1 O VAL A 12 N VAL A 37 SHEET 4 AB 9 VAL A 95 ASN A 98 1 O VAL A 95 N LEU A 13 SHEET 5 AB 9 GLY A 144 THR A 149 1 O ARG A 145 N VAL A 96 SHEET 6 AB 9 ILE A 187 ASN A 195 1 O HIS A 188 N ILE A 146 SHEET 7 AB 9 LEU A 236 GLY A 240 1 O PHE A 237 N ALA A 193 SHEET 8 AB 9 TRP A 243 ARG A 251 -1 O TRP A 243 N GLY A 240 SHEET 9 AB 9 TRP B 243 ARG B 251 -1 O ARG B 248 N GLU A 250 SHEET 1 CA 9 LYS C 68 ASN C 72 0 SHEET 2 CA 9 LEU C 35 ASN C 39 1 O VAL C 36 N VAL C 70 SHEET 3 CA 9 VAL C 11 VAL C 14 1 O VAL C 12 N VAL C 37 SHEET 4 CA 9 VAL C 95 ASN C 98 1 O VAL C 95 N LEU C 13 SHEET 5 CA 9 GLY C 144 THR C 149 1 O ARG C 145 N VAL C 96 SHEET 6 CA 9 ILE C 187 ASN C 195 1 O HIS C 188 N ILE C 146 SHEET 7 CA 9 LEU C 236 GLY C 240 1 O PHE C 237 N ALA C 193 SHEET 8 CA 9 TRP C 243 ARG C 251 -1 O TRP C 243 N GLY C 240 SHEET 9 CA 9 ALA D 255 ILE D 256 -1 O ALA D 255 N ILE C 244 SHEET 1 CB 9 LYS C 68 ASN C 72 0 SHEET 2 CB 9 LEU C 35 ASN C 39 1 O VAL C 36 N VAL C 70 SHEET 3 CB 9 VAL C 11 VAL C 14 1 O VAL C 12 N VAL C 37 SHEET 4 CB 9 VAL C 95 ASN C 98 1 O VAL C 95 N LEU C 13 SHEET 5 CB 9 GLY C 144 THR C 149 1 O ARG C 145 N VAL C 96 SHEET 6 CB 9 ILE C 187 ASN C 195 1 O HIS C 188 N ILE C 146 SHEET 7 CB 9 LEU C 236 GLY C 240 1 O PHE C 237 N ALA C 193 SHEET 8 CB 9 TRP C 243 ARG C 251 -1 O TRP C 243 N GLY C 240 SHEET 9 CB 9 TRP D 243 ARG D 251 -1 O ARG D 248 N GLU C 250 LINK C HIS A 137 N MSE A 138 1555 1555 1.33 LINK C MSE A 138 N LYS A 139 1555 1555 1.32 LINK C ILE A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N THR A 149 1555 1555 1.32 LINK C ARG A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N THR A 201 1555 1555 1.30 LINK C VAL A 204 N MSE A 205 1555 1555 1.33 LINK C MSE A 205 N PRO A 206 1555 1555 1.34 LINK C PRO A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N THR A 265 1555 1555 1.33 LINK C HIS B 137 N MSE B 138 1555 1555 1.33 LINK C MSE B 138 N LYS B 139 1555 1555 1.33 LINK C ILE B 147 N MSE B 148 1555 1555 1.33 LINK C MSE B 148 N THR B 149 1555 1555 1.33 LINK C PRO B 263 N MSE B 264 1555 1555 1.33 LINK C MSE B 264 N THR B 265 1555 1555 1.33 LINK C HIS C 137 N MSE C 138 1555 1555 1.33 LINK C MSE C 138 N LYS C 139 1555 1555 1.33 LINK C ILE C 147 N MSE C 148 1555 1555 1.33 LINK C MSE C 148 N THR C 149 1555 1555 1.33 LINK C PRO C 263 N MSE C 264 1555 1555 1.33 LINK C MSE C 264 N THR C 265 1555 1555 1.33 LINK C HIS D 137 N MSE D 138 1555 1555 1.33 LINK C MSE D 138 N LYS D 139 1555 1555 1.33 LINK C ILE D 147 N MSE D 148 1555 1555 1.33 LINK C MSE D 148 N THR D 149 1555 1555 1.33 LINK C ARG D 199 N MSE D 200 1555 1555 1.33 LINK C MSE D 200 N THR D 201 1555 1555 1.33 LINK C VAL D 204 N MSE D 205 1555 1555 1.33 LINK C MSE D 205 N PRO D 206 1555 1555 1.34 LINK C PRO D 263 N MSE D 264 1555 1555 1.33 LINK C MSE D 264 N THR D 265 1555 1555 1.33 SITE 1 AC1 1 PRO A 4 SITE 1 AC2 6 ARG A 6 PHE A 7 ASP A 8 ARG A 10 SITE 2 AC2 6 GLU A 228 HOH A2233 SITE 1 AC3 6 GLY A 51 SER A 52 SER A 53 GLY D 51 SITE 2 AC3 6 SER D 52 SER D 53 SITE 1 AC4 6 ARG D 6 PHE D 7 ASP D 8 ARG D 10 SITE 2 AC4 6 GLU D 228 HOH D2213 SITE 1 AC5 30 GLY A 16 GLY A 19 GLY A 20 LEU A 21 SITE 2 AC5 30 ASN A 39 ASP A 40 LEU A 41 SER A 75 SITE 3 AC5 30 VAL A 76 ASN A 99 ALA A 100 GLY A 101 SITE 4 AC5 30 ILE A 102 HIS A 123 THR A 149 ALA A 150 SITE 5 AC5 30 SER A 151 TYR A 164 LYS A 168 PRO A 194 SITE 6 AC5 30 ASN A 195 ALA A 196 SER A 198 ARG A 199 SITE 7 AC5 30 MSE A 200 HOH A2234 HOH A2235 HOH A2236 SITE 8 AC5 30 HOH A2237 HOH A2238 SITE 1 AC6 21 GLY B 16 GLY B 20 LEU B 21 ASN B 39 SITE 2 AC6 21 ASP B 40 LEU B 41 SER B 75 VAL B 76 SITE 3 AC6 21 ASN B 99 ALA B 100 GLY B 101 HIS B 123 SITE 4 AC6 21 THR B 149 SER B 151 TYR B 164 LYS B 168 SITE 5 AC6 21 PRO B 194 HOH B2025 HOH B2055 HOH B2175 SITE 6 AC6 21 HOH B2176 SITE 1 AC7 21 GLY C 16 GLY C 20 LEU C 21 ASN C 39 SITE 2 AC7 21 ASP C 40 LEU C 41 SER C 75 VAL C 76 SITE 3 AC7 21 ASN C 99 ALA C 100 GLY C 101 HIS C 123 SITE 4 AC7 21 THR C 149 SER C 151 TYR C 164 LYS C 168 SITE 5 AC7 21 PRO C 194 ASN C 195 HOH C2182 HOH C2185 SITE 6 AC7 21 HOH C2186 SITE 1 AC8 31 GLY D 16 GLY D 19 GLY D 20 LEU D 21 SITE 2 AC8 31 ASN D 39 ASP D 40 LEU D 41 SER D 75 SITE 3 AC8 31 VAL D 76 ASN D 99 ALA D 100 GLY D 101 SITE 4 AC8 31 ILE D 102 HIS D 123 THR D 149 ALA D 150 SITE 5 AC8 31 SER D 151 TYR D 164 LYS D 168 PRO D 194 SITE 6 AC8 31 ASN D 195 ALA D 196 SER D 198 ARG D 199 SITE 7 AC8 31 MSE D 200 HOH D2011 HOH D2028 HOH D2214 SITE 8 AC8 31 HOH D2215 HOH D2216 HOH D2217 CRYST1 89.466 82.748 95.745 90.00 94.20 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011177 0.000000 0.000821 0.00000 SCALE2 0.000000 0.012085 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010472 0.00000 MTRIX1 1 0.988400 -0.000500 0.152200 180.00000 1 MTRIX2 1 -0.000600 -1.000000 0.000300 359.84900 1 MTRIX3 1 0.152200 -0.000400 -0.988400 85.63200 1