data_1GZP # _entry.id 1GZP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1GZP pdb_00001gzp 10.2210/pdb1gzp/pdb PDBE EBI-9894 ? ? WWPDB D_1290009894 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1GZQ unspecified 'CD1B IN COMPLEX WITH PHOPHATIDYLINOSITOL' PDB 1A1M unspecified 'MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDETYPDINQML FROM GAG PROTEIN OF HIV2' PDB 1A1N unspecified 'MHC CLASS I MOLECULE B*3501 COMPLEXED WITH PEPTIDE VPLRPMTYFROM THE NEF PROTEIN (75- 82) OF HIV1' PDB 1A1O unspecified 'MHC CLASS I MOLECULE B5301 COMPLEXED WITH PEPTIDE LS6 (KPIVQYDNF) FROM THE MALARIA PARASITE P. FALCIPARUM' PDB 1A6Z unspecified 'HFE (HUMAN) HEMOCHROMATOSIS PROTEIN' PDB 1A9B unspecified 'DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B 3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS' PDB 1A9E unspecified 'DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B 3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS' PDB 1AGB unspecified 'ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION)' PDB 1AGC unspecified 'ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION)' PDB 1AGD unspecified 'ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYKL - INDEX PEPTIDE)' PDB 1AGE unspecified 'ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYRL - 7R MUTATION)' PDB 1AGF unspecified 'ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKRYKL - 5R MUTATION)' PDB 1AKJ unspecified 'COMPLEX OF THE HUMAN MHC CLASS I GLYCOPROTEIN HLA-A2 ANDTHE T CELL CORECEPTOR CD8' PDB 1CE6 unspecified 'MHC CLASS I H-2DB COMPLEXED WITH A SENDAI VIRUSNUCLEOPROTEIN PEPTIDE' PDB 1DE4 unspecified 'HEMOCHROMATOSIS PROTEIN HFE COMPLEXED WITH TRANSFERRINRECEPTOR' PDB 1E27 unspecified 'NONSTANDARD PEPTIDE BINDING OF HLA-B*5101 COMPLEXED WITH HIV IMMUNODOMINANT EPITOPE KM1 (LPPVVAKEI)' PDB 1E28 unspecified 'NONSTANDARD PEPTIDE BINDING OF HLA-B*5101 COMPLEXED WITH HIV IMMUNODOMINANT EPITOPE KM2 (TAFTIPSI)' PDB 1EFX unspecified 'STRUCTURE OF A COMPLEX BETWEEN THE HUMAN NATURAL KILLER CELL RECEPTOR KIR2DL2 AND A CLASS I MHC LIGAND HLA-CW3' PDB 1EXU unspecified 'CRYSTAL STRUCTURE OF THE HUMAN MHC-RELATED FC RECEPTOR' PDB 1HHG unspecified . PDB 1HHH unspecified . PDB 1HHI unspecified . PDB 1HHJ unspecified ;HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA -A 0201) COMPLEX WITH A NONAMERIC PEPTIDE FROM HIV-1 REVERSE TRANSCRIPTASE (RESIDUES 309-317) ; PDB 1HHK unspecified . PDB 1HLA unspecified 'HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN A2 ( HLA-A2, HUMAN LEUCOCYTE ANTIGEN)' PDB 1HSA unspecified 'HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN HLA- B(ASTERISK)2705' PDB 1HSB unspecified 'CLASS I HISTOCOMPATIBILITY ANTIGEN AW68.1 ( LEUCOCYTE ANTIGEN)' PDB 1I4F unspecified 'CRYSTAL STRUCTURE OF HLA-A*0201/MAGE-A4- PEPTIDE COMPLEX' PDB 1I7R unspecified 'CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1058' PDB 1I7T unspecified 'CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1049-5V' PDB 1I7U unspecified 'CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1049-6V' PDB 1IM3 unspecified 'CRYSTAL STRUCTURE OF THE HUMAN CYTOMEGALOVIRUS PROTEIN US2BOUND TO THE MHC CLASS I MOLECULE HLA-A2/TAX' PDB 1IM9 unspecified 'CRYSTAL STRUCTURE OF THE HUMAN NATURAL KILLER CELLINHIBITORY RECEPTOR KIR2DL1 BOUND TO ITS MHC LIGAND HLA-CW4' PDB 1JF1 unspecified 'CRYSTAL STRUCTURE OF HLA-A2*0201 IN COMPLEX WITH ADECAMERIC ALTERED PEPTIDE LIGAND FROM THE MART-1/MELAN-A' PDB 1JHT unspecified 'CRYSTAL STRUCTURE OF HLA-A2*0201 IN COMPLEX WITH ANONAMERIC ALTERED PEPTIDE LIGAND (ALGIGILTV) FROM THE MART-1/MELAN-A.' PDB 1JNJ unspecified 'NMR SOLUTION STRUCTURE OF THE HUMAN BETA2- MICROGLOBULIN' PDB 1QLF unspecified 'MHC CLASS I H-2DB COMPLEXED WITH GLYCOPEPTIDE K3G' PDB 1QQD unspecified 'CRYSTAL STRUCTURE OF HLA-CW4, A LIGAND FOR THE KIR2D NATURAL KILLER CELL INHIBITORY RECEPTOR' PDB 1TMC unspecified 'TRUNCATED HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-AW68 COMPLEXED WITH A DECAMERIC PEPTIDE (EVAPPEYHRK)' PDB 2CLR unspecified 'HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA -A 0201) COMPLEXED WITH A DECAMERIC PEPTIDE FROM CALRETICULIN' PDB 2HLA unspecified 'HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN AW 68.1 (HLA-AW 68.1, HUMAN LEUCOCYTE ANTIGEN)' PDB 3HLA unspecified 'HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN A2. 1 (HLA-A2.1 HUMAN LEUCOCYTE ANTIGEN)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1GZP _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2002-05-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gadola, S.D.' 1 ? 'Zaccai, N.R.' 2 ? 'Harlos, K.' 3 ? 'Shepherd, D.' 4 ? 'Ritter, G.' 5 ? 'Schmidt, R.R.' 6 ? 'Jones, E.Y.' 7 ? 'Cerundolo, V.' 8 ? # _citation.id primary _citation.title 'Structure of human CD1b with bound ligands at 2.3 A, a maze for alkyl chains.' _citation.journal_abbrev 'Nat. Immunol.' _citation.journal_volume 3 _citation.page_first 721 _citation.page_last 726 _citation.year 2002 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1529-2908 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12118248 _citation.pdbx_database_id_DOI 10.1038/ni821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gadola, S.D.' 1 ? primary 'Zaccai, N.R.' 2 ? primary 'Harlos, K.' 3 ? primary 'Shepherd, D.' 4 ? primary 'Castro-Palomino, J.C.' 5 ? primary 'Ritter, G.' 6 ? primary 'Schmidt, R.R.' 7 ? primary 'Jones, E.Y.' 8 ? primary 'Cerundolo, V.' 9 ? # _cell.entry_id 1GZP _cell.length_a 87.527 _cell.length_b 176.885 _cell.length_c 75.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GZP _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-CELL SURFACE GLYCOPROTEIN CD1B' 33088.215 1 ? ? 'RESIDUES 18-295' ? 2 polymer man B2-MICROGLOBULIN 11879.356 1 ? ? ? ? 3 non-polymer syn ;N-[(1S,2S)-2-HYDROXY-1-({[(2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2-YL]OXY}METHYL)OCTADECYL]OCTADECANAMIDE ; 744.137 1 ? ? ? ? 4 non-polymer syn DODECANE 170.335 1 ? ? ? ? 5 non-polymer syn DOCOSANE 310.601 1 ? ? ? ? 6 water nat water 18.015 40 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CD1B ANTIGEN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGF AREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMET VRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILP NANWTWYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWGPGSGGGLNDIFEAQKIEWH ; ;MGSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGF AREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMET VRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILP NANWTWYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWGPGSGGGLNDIFEAQKIEWH ; A ? 2 'polypeptide(L)' no no ;MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM ; ;MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 GLU n 1 5 HIS n 1 6 ALA n 1 7 PHE n 1 8 GLN n 1 9 GLY n 1 10 PRO n 1 11 THR n 1 12 SER n 1 13 PHE n 1 14 HIS n 1 15 VAL n 1 16 ILE n 1 17 GLN n 1 18 THR n 1 19 SER n 1 20 SER n 1 21 PHE n 1 22 THR n 1 23 ASN n 1 24 SER n 1 25 THR n 1 26 TRP n 1 27 ALA n 1 28 GLN n 1 29 THR n 1 30 GLN n 1 31 GLY n 1 32 SER n 1 33 GLY n 1 34 TRP n 1 35 LEU n 1 36 ASP n 1 37 ASP n 1 38 LEU n 1 39 GLN n 1 40 ILE n 1 41 HIS n 1 42 GLY n 1 43 TRP n 1 44 ASP n 1 45 SER n 1 46 ASP n 1 47 SER n 1 48 GLY n 1 49 THR n 1 50 ALA n 1 51 ILE n 1 52 PHE n 1 53 LEU n 1 54 LYS n 1 55 PRO n 1 56 TRP n 1 57 SER n 1 58 LYS n 1 59 GLY n 1 60 ASN n 1 61 PHE n 1 62 SER n 1 63 ASP n 1 64 LYS n 1 65 GLU n 1 66 VAL n 1 67 ALA n 1 68 GLU n 1 69 LEU n 1 70 GLU n 1 71 GLU n 1 72 ILE n 1 73 PHE n 1 74 ARG n 1 75 VAL n 1 76 TYR n 1 77 ILE n 1 78 PHE n 1 79 GLY n 1 80 PHE n 1 81 ALA n 1 82 ARG n 1 83 GLU n 1 84 VAL n 1 85 GLN n 1 86 ASP n 1 87 PHE n 1 88 ALA n 1 89 GLY n 1 90 ASP n 1 91 PHE n 1 92 GLN n 1 93 MET n 1 94 LYS n 1 95 TYR n 1 96 PRO n 1 97 PHE n 1 98 GLU n 1 99 ILE n 1 100 GLN n 1 101 GLY n 1 102 ILE n 1 103 ALA n 1 104 GLY n 1 105 CYS n 1 106 GLU n 1 107 LEU n 1 108 HIS n 1 109 SER n 1 110 GLY n 1 111 GLY n 1 112 ALA n 1 113 ILE n 1 114 VAL n 1 115 SER n 1 116 PHE n 1 117 LEU n 1 118 ARG n 1 119 GLY n 1 120 ALA n 1 121 LEU n 1 122 GLY n 1 123 GLY n 1 124 LEU n 1 125 ASP n 1 126 PHE n 1 127 LEU n 1 128 SER n 1 129 VAL n 1 130 LYS n 1 131 ASN n 1 132 ALA n 1 133 SER n 1 134 CYS n 1 135 VAL n 1 136 PRO n 1 137 SER n 1 138 PRO n 1 139 GLU n 1 140 GLY n 1 141 GLY n 1 142 SER n 1 143 ARG n 1 144 ALA n 1 145 GLN n 1 146 LYS n 1 147 PHE n 1 148 CYS n 1 149 ALA n 1 150 LEU n 1 151 ILE n 1 152 ILE n 1 153 GLN n 1 154 TYR n 1 155 GLN n 1 156 GLY n 1 157 ILE n 1 158 MET n 1 159 GLU n 1 160 THR n 1 161 VAL n 1 162 ARG n 1 163 ILE n 1 164 LEU n 1 165 LEU n 1 166 TYR n 1 167 GLU n 1 168 THR n 1 169 CYS n 1 170 PRO n 1 171 ARG n 1 172 TYR n 1 173 LEU n 1 174 LEU n 1 175 GLY n 1 176 VAL n 1 177 LEU n 1 178 ASN n 1 179 ALA n 1 180 GLY n 1 181 LYS n 1 182 ALA n 1 183 ASP n 1 184 LEU n 1 185 GLN n 1 186 ARG n 1 187 GLN n 1 188 VAL n 1 189 LYS n 1 190 PRO n 1 191 GLU n 1 192 ALA n 1 193 TRP n 1 194 LEU n 1 195 SER n 1 196 SER n 1 197 GLY n 1 198 PRO n 1 199 SER n 1 200 PRO n 1 201 GLY n 1 202 PRO n 1 203 GLY n 1 204 ARG n 1 205 LEU n 1 206 GLN n 1 207 LEU n 1 208 VAL n 1 209 CYS n 1 210 HIS n 1 211 VAL n 1 212 SER n 1 213 GLY n 1 214 PHE n 1 215 TYR n 1 216 PRO n 1 217 LYS n 1 218 PRO n 1 219 VAL n 1 220 TRP n 1 221 VAL n 1 222 MET n 1 223 TRP n 1 224 MET n 1 225 ARG n 1 226 GLY n 1 227 GLU n 1 228 GLN n 1 229 GLU n 1 230 GLN n 1 231 GLN n 1 232 GLY n 1 233 THR n 1 234 GLN n 1 235 LEU n 1 236 GLY n 1 237 ASP n 1 238 ILE n 1 239 LEU n 1 240 PRO n 1 241 ASN n 1 242 ALA n 1 243 ASN n 1 244 TRP n 1 245 THR n 1 246 TRP n 1 247 TYR n 1 248 LEU n 1 249 ARG n 1 250 ALA n 1 251 THR n 1 252 LEU n 1 253 ASP n 1 254 VAL n 1 255 ALA n 1 256 ASP n 1 257 GLY n 1 258 GLU n 1 259 ALA n 1 260 ALA n 1 261 GLY n 1 262 LEU n 1 263 SER n 1 264 CYS n 1 265 ARG n 1 266 VAL n 1 267 LYS n 1 268 HIS n 1 269 SER n 1 270 SER n 1 271 LEU n 1 272 GLU n 1 273 GLY n 1 274 GLN n 1 275 ASP n 1 276 ILE n 1 277 ILE n 1 278 LEU n 1 279 TYR n 1 280 TRP n 1 281 GLY n 1 282 PRO n 1 283 GLY n 1 284 SER n 1 285 GLY n 1 286 GLY n 1 287 GLY n 1 288 LEU n 1 289 ASN n 1 290 ASP n 1 291 ILE n 1 292 PHE n 1 293 GLU n 1 294 ALA n 1 295 GLN n 1 296 LYS n 1 297 ILE n 1 298 GLU n 1 299 TRP n 1 300 HIS n 2 1 MET n 2 2 ILE n 2 3 GLN n 2 4 ARG n 2 5 THR n 2 6 PRO n 2 7 LYS n 2 8 ILE n 2 9 GLN n 2 10 VAL n 2 11 TYR n 2 12 SER n 2 13 ARG n 2 14 HIS n 2 15 PRO n 2 16 ALA n 2 17 GLU n 2 18 ASN n 2 19 GLY n 2 20 LYS n 2 21 SER n 2 22 ASN n 2 23 PHE n 2 24 LEU n 2 25 ASN n 2 26 CYS n 2 27 TYR n 2 28 VAL n 2 29 SER n 2 30 GLY n 2 31 PHE n 2 32 HIS n 2 33 PRO n 2 34 SER n 2 35 ASP n 2 36 ILE n 2 37 GLU n 2 38 VAL n 2 39 ASP n 2 40 LEU n 2 41 LEU n 2 42 LYS n 2 43 ASN n 2 44 GLY n 2 45 GLU n 2 46 ARG n 2 47 ILE n 2 48 GLU n 2 49 LYS n 2 50 VAL n 2 51 GLU n 2 52 HIS n 2 53 SER n 2 54 ASP n 2 55 LEU n 2 56 SER n 2 57 PHE n 2 58 SER n 2 59 LYS n 2 60 ASP n 2 61 TRP n 2 62 SER n 2 63 PHE n 2 64 TYR n 2 65 LEU n 2 66 LEU n 2 67 TYR n 2 68 TYR n 2 69 THR n 2 70 GLU n 2 71 PHE n 2 72 THR n 2 73 PRO n 2 74 THR n 2 75 GLU n 2 76 LYS n 2 77 ASP n 2 78 GLU n 2 79 TYR n 2 80 ALA n 2 81 CYS n 2 82 ARG n 2 83 VAL n 2 84 ASN n 2 85 HIS n 2 86 VAL n 2 87 THR n 2 88 LEU n 2 89 SER n 2 90 GLN n 2 91 PRO n 2 92 LYS n 2 93 ILE n 2 94 VAL n 2 95 LYS n 2 96 TRP n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 MET n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? PET23D ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? PET23D ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1GZP 1 ? ? 1GZP ? 2 UNP CD1B_HUMAN 1 ? ? P29016 ? 3 PDB 1GZP 2 ? ? 1GZP ? 4 UNP B2MG_HUMAN 2 ? ? P01884 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1GZP A 1 ? 2 ? 1GZP -2 ? -1 ? -2 -1 2 2 1GZP A 3 ? 280 ? P29016 18 ? 295 ? 0 277 3 1 1GZP A 281 ? 300 ? 1GZP 278 ? 297 ? 278 297 4 3 1GZP B 1 ? 1 ? 1GZP 0 ? 0 ? 0 0 5 4 1GZP B 2 ? 100 ? P01884 21 ? 119 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D12 non-polymer . DODECANE ? 'C12 H26' 170.335 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GM2 non-polymer . ;N-[(1S,2S)-2-HYDROXY-1-({[(2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2-YL]OXY}METHYL)OCTADECYL]OCTADECANAMIDE ; ? 'C43 H85 N O8' 744.137 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TWT non-polymer . DOCOSANE ? 'C22 H46' 310.601 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1GZP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.24 _exptl_crystal.density_percent_sol 64 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.10 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20 DEGREE C 2UL OF PROTEIN + 1UL OF MOTHER LIQUOR 0.2M LITHIUM NITRATE 20% W/V POLYETHYLENE GLYCOL 3350, PH 7.1' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2001-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.93 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.93 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1GZP _reflns.observed_criterion_sigma_I -0.500 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 2.800 _reflns.number_obs 89500 _reflns.number_all ? _reflns.percent_possible_obs 87.4 _reflns.pdbx_Rmerge_I_obs 0.10300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7000 _reflns.B_iso_Wilson_estimate 95.2 _reflns.pdbx_redundancy 6.800 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 71.1 _reflns_shell.Rmerge_I_obs 0.32500 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.800 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1GZP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12918 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 355814.88 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.78 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 87.4 _refine.ls_R_factor_obs 0.225 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.225 _refine.ls_R_factor_R_free 0.273 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.1 _refine.ls_number_reflns_R_free 535 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 50.2 _refine.aniso_B[1][1] 2.43 _refine.aniso_B[2][2] -6.93 _refine.aniso_B[3][3] 4.50 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.282575 _refine.solvent_model_param_bsol 14.0445 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1CD1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1GZP _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.44 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.48 _refine_analyze.Luzzati_sigma_a_free 0.70 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2992 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 86 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 3118 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 34.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.46 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.35 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 3.90 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 4.01 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.72 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.98 _refine_ls_shell.number_reflns_R_work 1543 _refine_ls_shell.R_factor_R_work 0.367 _refine_ls_shell.percent_reflns_obs 67.2 _refine_ls_shell.R_factor_R_free 0.428 _refine_ls_shell.R_factor_R_free_error 0.051 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 GM2_11.PARAM GM2_11.TOP # _struct.entry_id 1GZP _struct.title 'CD1b in complex with GM2 ganglioside' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1GZP _struct_keywords.pdbx_keywords GLYCOPROTEIN _struct_keywords.text 'LIPID, GANGLIOSIDE, MHC, ANTIGEN PRESENTATION, GLYCOPROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 64 ? PHE A 87 ? LYS A 61 PHE A 84 1 ? 24 HELX_P HELX_P2 2 GLY A 141 ? ILE A 152 ? GLY A 138 ILE A 149 1 ? 12 HELX_P HELX_P3 3 TYR A 154 ? GLU A 167 ? TYR A 151 GLU A 164 1 ? 14 HELX_P HELX_P4 4 GLU A 167 ? GLY A 180 ? GLU A 164 GLY A 177 1 ? 14 HELX_P HELX_P5 5 GLY A 180 ? GLN A 185 ? GLY A 177 GLN A 182 1 ? 6 HELX_P HELX_P6 6 GLY A 257 ? ALA A 260 ? GLY A 254 ALA A 257 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 105 SG ? ? ? 1_555 A CYS 169 SG ? ? A CYS 102 A CYS 166 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 134 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 131 A CYS 145 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 209 SG ? ? ? 1_555 A CYS 264 SG ? ? A CYS 206 A CYS 261 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 81 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.032 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 95 A . ? TYR 92 A PRO 96 A ? PRO 93 A 1 -0.19 2 TYR 215 A . ? TYR 212 A PRO 216 A ? PRO 213 A 1 -0.07 3 HIS 32 B . ? HIS 31 B PRO 33 B ? PRO 32 B 1 -0.09 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 8 ? AB ? 4 ? AC ? 4 ? AD ? 4 ? BA ? 4 ? BB ? 4 ? BC ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BC 1 2 ? anti-parallel BC 2 3 ? anti-parallel BC 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 49 ? PHE A 52 ? THR A 46 PHE A 49 AA 2 LEU A 38 ? ASP A 44 ? LEU A 35 ASP A 41 AA 3 TRP A 26 ? LEU A 35 ? TRP A 23 LEU A 32 AA 4 SER A 12 ? ASN A 23 ? SER A 9 ASN A 20 AA 5 PHE A 97 ? LEU A 107 ? PHE A 94 LEU A 104 AA 6 ILE A 113 ? LEU A 121 ? ILE A 110 LEU A 118 AA 7 LEU A 124 ? LYS A 130 ? LEU A 121 LYS A 127 AA 8 SER A 133 ? PRO A 136 ? SER A 130 PRO A 133 AB 1 GLU A 191 ? SER A 196 ? GLU A 188 SER A 193 AB 2 ARG A 204 ? SER A 212 ? ARG A 201 SER A 209 AB 3 THR A 245 ? ALA A 255 ? THR A 242 ALA A 252 AB 4 GLN A 234 ? LEU A 235 ? GLN A 231 LEU A 232 AC 1 GLU A 191 ? SER A 196 ? GLU A 188 SER A 193 AC 2 ARG A 204 ? SER A 212 ? ARG A 201 SER A 209 AC 3 THR A 245 ? ALA A 255 ? THR A 242 ALA A 252 AC 4 LEU A 239 ? ASN A 241 ? LEU A 236 ASN A 238 AD 1 GLN A 228 ? GLU A 229 ? GLN A 225 GLU A 226 AD 2 VAL A 219 ? ARG A 225 ? VAL A 216 ARG A 222 AD 3 SER A 263 ? HIS A 268 ? SER A 260 HIS A 265 AD 4 ILE A 276 ? TYR A 279 ? ILE A 273 TYR A 276 BA 1 LYS B 7 ? SER B 12 ? LYS B 6 SER B 11 BA 2 ASN B 22 ? PHE B 31 ? ASN B 21 PHE B 30 BA 3 PHE B 63 ? PHE B 71 ? PHE B 62 PHE B 70 BA 4 GLU B 51 ? HIS B 52 ? GLU B 50 HIS B 51 BB 1 LYS B 7 ? SER B 12 ? LYS B 6 SER B 11 BB 2 ASN B 22 ? PHE B 31 ? ASN B 21 PHE B 30 BB 3 PHE B 63 ? PHE B 71 ? PHE B 62 PHE B 70 BB 4 SER B 56 ? PHE B 57 ? SER B 55 PHE B 56 BC 1 GLU B 45 ? ARG B 46 ? GLU B 44 ARG B 45 BC 2 GLU B 37 ? LYS B 42 ? GLU B 36 LYS B 41 BC 3 TYR B 79 ? ASN B 84 ? TYR B 78 ASN B 83 BC 4 LYS B 92 ? LYS B 95 ? LYS B 91 LYS B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 51 ? N ILE A 48 O GLY A 42 ? O GLY A 39 AA 2 3 N TRP A 43 ? N TRP A 40 O GLY A 31 ? O GLY A 28 AA 3 4 N TRP A 34 ? N TRP A 31 O HIS A 14 ? O HIS A 11 AA 4 5 N PHE A 21 ? N PHE A 18 O PHE A 97 ? O PHE A 94 AA 5 6 N GLU A 106 ? N GLU A 103 O VAL A 114 ? O VAL A 111 AA 6 7 N LEU A 121 ? N LEU A 118 O LEU A 124 ? O LEU A 121 AA 7 8 N LYS A 130 ? N LYS A 127 O SER A 133 ? O SER A 130 AB 1 2 N SER A 195 ? N SER A 192 O VAL A 208 ? O VAL A 205 AB 2 3 N VAL A 211 ? N VAL A 208 O LEU A 248 ? O LEU A 245 AB 3 4 N THR A 251 ? N THR A 248 O GLN A 234 ? O GLN A 231 AC 1 2 N SER A 195 ? N SER A 192 O VAL A 208 ? O VAL A 205 AC 2 3 N VAL A 211 ? N VAL A 208 O LEU A 248 ? O LEU A 245 AC 3 4 N TYR A 247 ? N TYR A 244 O LEU A 239 ? O LEU A 236 AD 1 2 N GLN A 228 ? N GLN A 225 O ARG A 225 ? O ARG A 222 AD 2 3 N MET A 224 ? N MET A 221 O SER A 263 ? O SER A 260 AD 3 4 N VAL A 266 ? N VAL A 263 O ILE A 276 ? O ILE A 273 BA 1 2 N TYR B 11 ? N TYR B 10 O ASN B 25 ? O ASN B 24 BA 2 3 N PHE B 31 ? N PHE B 30 O PHE B 63 ? O PHE B 62 BA 3 4 N TYR B 68 ? N TYR B 67 O GLU B 51 ? O GLU B 50 BB 1 2 N TYR B 11 ? N TYR B 10 O ASN B 25 ? O ASN B 24 BB 2 3 N PHE B 31 ? N PHE B 30 O PHE B 63 ? O PHE B 62 BB 3 4 N TYR B 64 ? N TYR B 63 O SER B 56 ? O SER B 55 BC 1 2 N GLU B 45 ? N GLU B 44 O LYS B 42 ? O LYS B 41 BC 2 3 N LEU B 41 ? N LEU B 40 O ALA B 80 ? O ALA B 79 BC 3 4 N VAL B 83 ? N VAL B 82 O LYS B 92 ? O LYS B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GM2 A1280' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE D12 A1281' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE TWT A1282' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TYR A 76 ? TYR A 73 . ? 1_555 ? 2 AC1 8 GLY A 79 ? GLY A 76 . ? 1_555 ? 3 AC1 8 GLY A 156 ? GLY A 153 . ? 1_555 ? 4 AC1 8 ILE A 157 ? ILE A 154 . ? 1_555 ? 5 AC1 8 MET A 158 ? MET A 155 . ? 1_555 ? 6 AC1 8 THR A 160 ? THR A 157 . ? 1_555 ? 7 AC1 8 LEU A 164 ? LEU A 161 . ? 1_555 ? 8 AC1 8 D12 D . ? D12 A 1281 . ? 1_555 ? 9 AC2 3 GLU A 83 ? GLU A 80 . ? 1_555 ? 10 AC2 3 MET A 93 ? MET A 90 . ? 1_555 ? 11 AC2 3 GM2 C . ? GM2 A 1280 . ? 1_555 ? 12 AC3 5 ILE A 16 ? ILE A 13 . ? 1_555 ? 13 AC3 5 GLN A 17 ? GLN A 14 . ? 1_555 ? 14 AC3 5 TYR A 76 ? TYR A 73 . ? 1_555 ? 15 AC3 5 ALA A 103 ? ALA A 100 . ? 1_555 ? 16 AC3 5 PHE A 126 ? PHE A 123 . ? 1_555 ? # _database_PDB_matrix.entry_id 1GZP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1GZP _atom_sites.fract_transf_matrix[1][1] 0.011425 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005653 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013289 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 ? ? ? A . n A 1 2 GLY 2 -1 ? ? ? A . n A 1 3 SER 3 0 ? ? ? A . n A 1 4 GLU 4 1 ? ? ? A . n A 1 5 HIS 5 2 ? ? ? A . n A 1 6 ALA 6 3 ? ? ? A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 GLN 8 5 5 GLN GLN A . n A 1 9 GLY 9 6 6 GLY GLY A . n A 1 10 PRO 10 7 7 PRO PRO A . n A 1 11 THR 11 8 8 THR THR A . n A 1 12 SER 12 9 9 SER SER A . n A 1 13 PHE 13 10 10 PHE PHE A . n A 1 14 HIS 14 11 11 HIS HIS A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 THR 18 15 15 THR THR A . n A 1 19 SER 19 16 16 SER SER A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 PHE 21 18 18 PHE PHE A . n A 1 22 THR 22 19 19 THR THR A . n A 1 23 ASN 23 20 20 ASN ASN A . n A 1 24 SER 24 21 21 SER SER A . n A 1 25 THR 25 22 22 THR THR A . n A 1 26 TRP 26 23 23 TRP TRP A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 GLN 28 25 25 GLN GLN A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 GLN 30 27 27 GLN GLN A . n A 1 31 GLY 31 28 28 GLY GLY A . n A 1 32 SER 32 29 29 SER SER A . n A 1 33 GLY 33 30 30 GLY GLY A . n A 1 34 TRP 34 31 31 TRP TRP A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 ASP 36 33 33 ASP ASP A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 GLN 39 36 36 GLN GLN A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 HIS 41 38 38 HIS HIS A . n A 1 42 GLY 42 39 39 GLY GLY A . n A 1 43 TRP 43 40 40 TRP TRP A . n A 1 44 ASP 44 41 41 ASP ASP A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 GLY 48 45 45 GLY GLY A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 ILE 51 48 48 ILE ILE A . n A 1 52 PHE 52 49 49 PHE PHE A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 PRO 55 52 52 PRO PRO A . n A 1 56 TRP 56 53 53 TRP TRP A . n A 1 57 SER 57 54 54 SER SER A . n A 1 58 LYS 58 55 55 LYS LYS A . n A 1 59 GLY 59 56 56 GLY GLY A . n A 1 60 ASN 60 57 57 ASN ASN A . n A 1 61 PHE 61 58 58 PHE PHE A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 ASP 63 60 60 ASP ASP A . n A 1 64 LYS 64 61 61 LYS LYS A . n A 1 65 GLU 65 62 62 GLU GLU A . n A 1 66 VAL 66 63 63 VAL VAL A . n A 1 67 ALA 67 64 64 ALA ALA A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 GLU 70 67 67 GLU GLU A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 PHE 73 70 70 PHE PHE A . n A 1 74 ARG 74 71 71 ARG ARG A . n A 1 75 VAL 75 72 72 VAL VAL A . n A 1 76 TYR 76 73 73 TYR TYR A . n A 1 77 ILE 77 74 74 ILE ILE A . n A 1 78 PHE 78 75 75 PHE PHE A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 PHE 80 77 77 PHE PHE A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 ARG 82 79 79 ARG ARG A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 VAL 84 81 81 VAL VAL A . n A 1 85 GLN 85 82 82 GLN GLN A . n A 1 86 ASP 86 83 83 ASP ASP A . n A 1 87 PHE 87 84 84 PHE PHE A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 GLY 89 86 86 GLY GLY A . n A 1 90 ASP 90 87 87 ASP ASP A . n A 1 91 PHE 91 88 88 PHE PHE A . n A 1 92 GLN 92 89 89 GLN GLN A . n A 1 93 MET 93 90 90 MET MET A . n A 1 94 LYS 94 91 91 LYS LYS A . n A 1 95 TYR 95 92 92 TYR TYR A . n A 1 96 PRO 96 93 93 PRO PRO A . n A 1 97 PHE 97 94 94 PHE PHE A . n A 1 98 GLU 98 95 95 GLU GLU A . n A 1 99 ILE 99 96 96 ILE ILE A . n A 1 100 GLN 100 97 97 GLN GLN A . n A 1 101 GLY 101 98 98 GLY GLY A . n A 1 102 ILE 102 99 99 ILE ILE A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 CYS 105 102 102 CYS CYS A . n A 1 106 GLU 106 103 103 GLU GLU A . n A 1 107 LEU 107 104 104 LEU LEU A . n A 1 108 HIS 108 105 105 HIS HIS A . n A 1 109 SER 109 106 106 SER SER A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 ALA 112 109 109 ALA ALA A . n A 1 113 ILE 113 110 110 ILE ILE A . n A 1 114 VAL 114 111 111 VAL VAL A . n A 1 115 SER 115 112 112 SER SER A . n A 1 116 PHE 116 113 113 PHE PHE A . n A 1 117 LEU 117 114 114 LEU LEU A . n A 1 118 ARG 118 115 115 ARG ARG A . n A 1 119 GLY 119 116 116 GLY GLY A . n A 1 120 ALA 120 117 117 ALA ALA A . n A 1 121 LEU 121 118 118 LEU LEU A . n A 1 122 GLY 122 119 119 GLY GLY A . n A 1 123 GLY 123 120 120 GLY GLY A . n A 1 124 LEU 124 121 121 LEU LEU A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 PHE 126 123 123 PHE PHE A . n A 1 127 LEU 127 124 124 LEU LEU A . n A 1 128 SER 128 125 125 SER SER A . n A 1 129 VAL 129 126 126 VAL VAL A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 ASN 131 128 128 ASN ASN A . n A 1 132 ALA 132 129 129 ALA ALA A . n A 1 133 SER 133 130 130 SER SER A . n A 1 134 CYS 134 131 131 CYS CYS A . n A 1 135 VAL 135 132 132 VAL VAL A . n A 1 136 PRO 136 133 133 PRO PRO A . n A 1 137 SER 137 134 134 SER SER A . n A 1 138 PRO 138 135 135 PRO PRO A . n A 1 139 GLU 139 136 136 GLU GLU A . n A 1 140 GLY 140 137 137 GLY GLY A . n A 1 141 GLY 141 138 138 GLY GLY A . n A 1 142 SER 142 139 139 SER SER A . n A 1 143 ARG 143 140 140 ARG ARG A . n A 1 144 ALA 144 141 141 ALA ALA A . n A 1 145 GLN 145 142 142 GLN GLN A . n A 1 146 LYS 146 143 143 LYS LYS A . n A 1 147 PHE 147 144 144 PHE PHE A . n A 1 148 CYS 148 145 145 CYS CYS A . n A 1 149 ALA 149 146 146 ALA ALA A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 ILE 151 148 148 ILE ILE A . n A 1 152 ILE 152 149 149 ILE ILE A . n A 1 153 GLN 153 150 150 GLN GLN A . n A 1 154 TYR 154 151 151 TYR TYR A . n A 1 155 GLN 155 152 152 GLN GLN A . n A 1 156 GLY 156 153 153 GLY GLY A . n A 1 157 ILE 157 154 154 ILE ILE A . n A 1 158 MET 158 155 155 MET MET A . n A 1 159 GLU 159 156 156 GLU GLU A . n A 1 160 THR 160 157 157 THR THR A . n A 1 161 VAL 161 158 158 VAL VAL A . n A 1 162 ARG 162 159 159 ARG ARG A . n A 1 163 ILE 163 160 160 ILE ILE A . n A 1 164 LEU 164 161 161 LEU LEU A . n A 1 165 LEU 165 162 162 LEU LEU A . n A 1 166 TYR 166 163 163 TYR TYR A . n A 1 167 GLU 167 164 164 GLU GLU A . n A 1 168 THR 168 165 165 THR THR A . n A 1 169 CYS 169 166 166 CYS CYS A . n A 1 170 PRO 170 167 167 PRO PRO A . n A 1 171 ARG 171 168 168 ARG ARG A . n A 1 172 TYR 172 169 169 TYR TYR A . n A 1 173 LEU 173 170 170 LEU LEU A . n A 1 174 LEU 174 171 171 LEU LEU A . n A 1 175 GLY 175 172 172 GLY GLY A . n A 1 176 VAL 176 173 173 VAL VAL A . n A 1 177 LEU 177 174 174 LEU LEU A . n A 1 178 ASN 178 175 175 ASN ASN A . n A 1 179 ALA 179 176 176 ALA ALA A . n A 1 180 GLY 180 177 177 GLY GLY A . n A 1 181 LYS 181 178 178 LYS LYS A . n A 1 182 ALA 182 179 179 ALA ALA A . n A 1 183 ASP 183 180 180 ASP ASP A . n A 1 184 LEU 184 181 181 LEU LEU A . n A 1 185 GLN 185 182 182 GLN GLN A . n A 1 186 ARG 186 183 183 ARG ARG A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 VAL 188 185 185 VAL VAL A . n A 1 189 LYS 189 186 186 LYS LYS A . n A 1 190 PRO 190 187 187 PRO PRO A . n A 1 191 GLU 191 188 188 GLU GLU A . n A 1 192 ALA 192 189 189 ALA ALA A . n A 1 193 TRP 193 190 190 TRP TRP A . n A 1 194 LEU 194 191 191 LEU LEU A . n A 1 195 SER 195 192 192 SER SER A . n A 1 196 SER 196 193 193 SER SER A . n A 1 197 GLY 197 194 194 GLY GLY A . n A 1 198 PRO 198 195 195 PRO PRO A . n A 1 199 SER 199 196 196 SER SER A . n A 1 200 PRO 200 197 197 PRO PRO A . n A 1 201 GLY 201 198 198 GLY GLY A . n A 1 202 PRO 202 199 199 PRO PRO A . n A 1 203 GLY 203 200 200 GLY GLY A . n A 1 204 ARG 204 201 201 ARG ARG A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 GLN 206 203 203 GLN GLN A . n A 1 207 LEU 207 204 204 LEU LEU A . n A 1 208 VAL 208 205 205 VAL VAL A . n A 1 209 CYS 209 206 206 CYS CYS A . n A 1 210 HIS 210 207 207 HIS HIS A . n A 1 211 VAL 211 208 208 VAL VAL A . n A 1 212 SER 212 209 209 SER SER A . n A 1 213 GLY 213 210 210 GLY GLY A . n A 1 214 PHE 214 211 211 PHE PHE A . n A 1 215 TYR 215 212 212 TYR TYR A . n A 1 216 PRO 216 213 213 PRO PRO A . n A 1 217 LYS 217 214 214 LYS LYS A . n A 1 218 PRO 218 215 215 PRO PRO A . n A 1 219 VAL 219 216 216 VAL VAL A . n A 1 220 TRP 220 217 217 TRP TRP A . n A 1 221 VAL 221 218 218 VAL VAL A . n A 1 222 MET 222 219 219 MET MET A . n A 1 223 TRP 223 220 220 TRP TRP A . n A 1 224 MET 224 221 221 MET MET A . n A 1 225 ARG 225 222 222 ARG ARG A . n A 1 226 GLY 226 223 223 GLY GLY A . n A 1 227 GLU 227 224 224 GLU GLU A . n A 1 228 GLN 228 225 225 GLN GLN A . n A 1 229 GLU 229 226 226 GLU GLU A . n A 1 230 GLN 230 227 227 GLN GLN A . n A 1 231 GLN 231 228 228 GLN GLN A . n A 1 232 GLY 232 229 229 GLY GLY A . n A 1 233 THR 233 230 230 THR THR A . n A 1 234 GLN 234 231 231 GLN GLN A . n A 1 235 LEU 235 232 232 LEU LEU A . n A 1 236 GLY 236 233 233 GLY GLY A . n A 1 237 ASP 237 234 234 ASP ASP A . n A 1 238 ILE 238 235 235 ILE ILE A . n A 1 239 LEU 239 236 236 LEU LEU A . n A 1 240 PRO 240 237 237 PRO PRO A . n A 1 241 ASN 241 238 238 ASN ASN A . n A 1 242 ALA 242 239 239 ALA ALA A . n A 1 243 ASN 243 240 240 ASN ASN A . n A 1 244 TRP 244 241 241 TRP TRP A . n A 1 245 THR 245 242 242 THR THR A . n A 1 246 TRP 246 243 243 TRP TRP A . n A 1 247 TYR 247 244 244 TYR TYR A . n A 1 248 LEU 248 245 245 LEU LEU A . n A 1 249 ARG 249 246 246 ARG ARG A . n A 1 250 ALA 250 247 247 ALA ALA A . n A 1 251 THR 251 248 248 THR THR A . n A 1 252 LEU 252 249 249 LEU LEU A . n A 1 253 ASP 253 250 250 ASP ASP A . n A 1 254 VAL 254 251 251 VAL VAL A . n A 1 255 ALA 255 252 252 ALA ALA A . n A 1 256 ASP 256 253 253 ASP ASP A . n A 1 257 GLY 257 254 254 GLY GLY A . n A 1 258 GLU 258 255 255 GLU GLU A . n A 1 259 ALA 259 256 256 ALA ALA A . n A 1 260 ALA 260 257 257 ALA ALA A . n A 1 261 GLY 261 258 258 GLY GLY A . n A 1 262 LEU 262 259 259 LEU LEU A . n A 1 263 SER 263 260 260 SER SER A . n A 1 264 CYS 264 261 261 CYS CYS A . n A 1 265 ARG 265 262 262 ARG ARG A . n A 1 266 VAL 266 263 263 VAL VAL A . n A 1 267 LYS 267 264 264 LYS LYS A . n A 1 268 HIS 268 265 265 HIS HIS A . n A 1 269 SER 269 266 266 SER SER A . n A 1 270 SER 270 267 267 SER SER A . n A 1 271 LEU 271 268 268 LEU LEU A . n A 1 272 GLU 272 269 269 GLU GLU A . n A 1 273 GLY 273 270 270 GLY GLY A . n A 1 274 GLN 274 271 271 GLN GLN A . n A 1 275 ASP 275 272 272 ASP ASP A . n A 1 276 ILE 276 273 273 ILE ILE A . n A 1 277 ILE 277 274 274 ILE ILE A . n A 1 278 LEU 278 275 275 LEU LEU A . n A 1 279 TYR 279 276 276 TYR TYR A . n A 1 280 TRP 280 277 277 TRP TRP A . n A 1 281 GLY 281 278 278 GLY GLY A . n A 1 282 PRO 282 279 279 PRO PRO A . n A 1 283 GLY 283 280 280 GLY GLY A . n A 1 284 SER 284 281 ? ? ? A . n A 1 285 GLY 285 282 ? ? ? A . n A 1 286 GLY 286 283 ? ? ? A . n A 1 287 GLY 287 284 ? ? ? A . n A 1 288 LEU 288 285 ? ? ? A . n A 1 289 ASN 289 286 ? ? ? A . n A 1 290 ASP 290 287 ? ? ? A . n A 1 291 ILE 291 288 ? ? ? A . n A 1 292 PHE 292 289 ? ? ? A . n A 1 293 GLU 293 290 ? ? ? A . n A 1 294 ALA 294 291 ? ? ? A . n A 1 295 GLN 295 292 ? ? ? A . n A 1 296 LYS 296 293 ? ? ? A . n A 1 297 ILE 297 294 ? ? ? A . n A 1 298 GLU 298 295 ? ? ? A . n A 1 299 TRP 299 296 ? ? ? A . n A 1 300 HIS 300 297 ? ? ? A . n B 2 1 MET 1 0 0 MET MET B . n B 2 2 ILE 2 1 1 ILE ILE B . n B 2 3 GLN 3 2 2 GLN GLN B . n B 2 4 ARG 4 3 3 ARG ARG B . n B 2 5 THR 5 4 4 THR THR B . n B 2 6 PRO 6 5 5 PRO PRO B . n B 2 7 LYS 7 6 6 LYS LYS B . n B 2 8 ILE 8 7 7 ILE ILE B . n B 2 9 GLN 9 8 8 GLN GLN B . n B 2 10 VAL 10 9 9 VAL VAL B . n B 2 11 TYR 11 10 10 TYR TYR B . n B 2 12 SER 12 11 11 SER SER B . n B 2 13 ARG 13 12 12 ARG ARG B . n B 2 14 HIS 14 13 13 HIS HIS B . n B 2 15 PRO 15 14 14 PRO PRO B . n B 2 16 ALA 16 15 15 ALA ALA B . n B 2 17 GLU 17 16 16 GLU GLU B . n B 2 18 ASN 18 17 17 ASN ASN B . n B 2 19 GLY 19 18 18 GLY GLY B . n B 2 20 LYS 20 19 19 LYS LYS B . n B 2 21 SER 21 20 20 SER SER B . n B 2 22 ASN 22 21 21 ASN ASN B . n B 2 23 PHE 23 22 22 PHE PHE B . n B 2 24 LEU 24 23 23 LEU LEU B . n B 2 25 ASN 25 24 24 ASN ASN B . n B 2 26 CYS 26 25 25 CYS CYS B . n B 2 27 TYR 27 26 26 TYR TYR B . n B 2 28 VAL 28 27 27 VAL VAL B . n B 2 29 SER 29 28 28 SER SER B . n B 2 30 GLY 30 29 29 GLY GLY B . n B 2 31 PHE 31 30 30 PHE PHE B . n B 2 32 HIS 32 31 31 HIS HIS B . n B 2 33 PRO 33 32 32 PRO PRO B . n B 2 34 SER 34 33 33 SER SER B . n B 2 35 ASP 35 34 34 ASP ASP B . n B 2 36 ILE 36 35 35 ILE ILE B . n B 2 37 GLU 37 36 36 GLU GLU B . n B 2 38 VAL 38 37 37 VAL VAL B . n B 2 39 ASP 39 38 38 ASP ASP B . n B 2 40 LEU 40 39 39 LEU LEU B . n B 2 41 LEU 41 40 40 LEU LEU B . n B 2 42 LYS 42 41 41 LYS LYS B . n B 2 43 ASN 43 42 42 ASN ASN B . n B 2 44 GLY 44 43 43 GLY GLY B . n B 2 45 GLU 45 44 44 GLU GLU B . n B 2 46 ARG 46 45 45 ARG ARG B . n B 2 47 ILE 47 46 46 ILE ILE B . n B 2 48 GLU 48 47 47 GLU GLU B . n B 2 49 LYS 49 48 48 LYS LYS B . n B 2 50 VAL 50 49 49 VAL VAL B . n B 2 51 GLU 51 50 50 GLU GLU B . n B 2 52 HIS 52 51 51 HIS HIS B . n B 2 53 SER 53 52 52 SER SER B . n B 2 54 ASP 54 53 53 ASP ASP B . n B 2 55 LEU 55 54 54 LEU LEU B . n B 2 56 SER 56 55 55 SER SER B . n B 2 57 PHE 57 56 56 PHE PHE B . n B 2 58 SER 58 57 57 SER SER B . n B 2 59 LYS 59 58 58 LYS LYS B . n B 2 60 ASP 60 59 59 ASP ASP B . n B 2 61 TRP 61 60 60 TRP TRP B . n B 2 62 SER 62 61 61 SER SER B . n B 2 63 PHE 63 62 62 PHE PHE B . n B 2 64 TYR 64 63 63 TYR TYR B . n B 2 65 LEU 65 64 64 LEU LEU B . n B 2 66 LEU 66 65 65 LEU LEU B . n B 2 67 TYR 67 66 66 TYR TYR B . n B 2 68 TYR 68 67 67 TYR TYR B . n B 2 69 THR 69 68 68 THR THR B . n B 2 70 GLU 70 69 69 GLU GLU B . n B 2 71 PHE 71 70 70 PHE PHE B . n B 2 72 THR 72 71 71 THR THR B . n B 2 73 PRO 73 72 72 PRO PRO B . n B 2 74 THR 74 73 73 THR THR B . n B 2 75 GLU 75 74 74 GLU GLU B . n B 2 76 LYS 76 75 75 LYS LYS B . n B 2 77 ASP 77 76 76 ASP ASP B . n B 2 78 GLU 78 77 77 GLU GLU B . n B 2 79 TYR 79 78 78 TYR TYR B . n B 2 80 ALA 80 79 79 ALA ALA B . n B 2 81 CYS 81 80 80 CYS CYS B . n B 2 82 ARG 82 81 81 ARG ARG B . n B 2 83 VAL 83 82 82 VAL VAL B . n B 2 84 ASN 84 83 83 ASN ASN B . n B 2 85 HIS 85 84 84 HIS HIS B . n B 2 86 VAL 86 85 85 VAL VAL B . n B 2 87 THR 87 86 86 THR THR B . n B 2 88 LEU 88 87 87 LEU LEU B . n B 2 89 SER 89 88 88 SER SER B . n B 2 90 GLN 90 89 89 GLN GLN B . n B 2 91 PRO 91 90 90 PRO PRO B . n B 2 92 LYS 92 91 91 LYS LYS B . n B 2 93 ILE 93 92 92 ILE ILE B . n B 2 94 VAL 94 93 93 VAL VAL B . n B 2 95 LYS 95 94 94 LYS LYS B . n B 2 96 TRP 96 95 95 TRP TRP B . n B 2 97 ASP 97 96 96 ASP ASP B . n B 2 98 ARG 98 97 97 ARG ARG B . n B 2 99 ASP 99 98 98 ASP ASP B . n B 2 100 MET 100 99 99 MET MET B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GM2 1 1280 1280 GM2 GM2 A . D 4 D12 1 1281 1281 D12 D12 A . E 5 TWT 1 1282 1282 TWT TWT A . F 6 HOH 1 2001 2001 HOH HOH A . F 6 HOH 2 2002 2002 HOH HOH A . F 6 HOH 3 2003 2003 HOH HOH A . F 6 HOH 4 2004 2004 HOH HOH A . F 6 HOH 5 2005 2005 HOH HOH A . F 6 HOH 6 2006 2006 HOH HOH A . F 6 HOH 7 2007 2007 HOH HOH A . F 6 HOH 8 2008 2008 HOH HOH A . F 6 HOH 9 2009 2009 HOH HOH A . F 6 HOH 10 2010 2010 HOH HOH A . F 6 HOH 11 2011 2011 HOH HOH A . F 6 HOH 12 2012 2012 HOH HOH A . F 6 HOH 13 2013 2013 HOH HOH A . F 6 HOH 14 2014 2014 HOH HOH A . F 6 HOH 15 2015 2015 HOH HOH A . F 6 HOH 16 2016 2016 HOH HOH A . F 6 HOH 17 2017 2017 HOH HOH A . F 6 HOH 18 2018 2018 HOH HOH A . F 6 HOH 19 2019 2019 HOH HOH A . F 6 HOH 20 2020 2020 HOH HOH A . F 6 HOH 21 2021 2021 HOH HOH A . F 6 HOH 22 2022 2022 HOH HOH A . F 6 HOH 23 2023 2023 HOH HOH A . F 6 HOH 24 2024 2024 HOH HOH A . F 6 HOH 25 2025 2025 HOH HOH A . G 6 HOH 1 2001 2001 HOH HOH B . G 6 HOH 2 2002 2002 HOH HOH B . G 6 HOH 3 2003 2003 HOH HOH B . G 6 HOH 4 2004 2004 HOH HOH B . G 6 HOH 5 2005 2005 HOH HOH B . G 6 HOH 6 2006 2006 HOH HOH B . G 6 HOH 7 2007 2007 HOH HOH B . G 6 HOH 8 2008 2008 HOH HOH B . G 6 HOH 9 2009 2009 HOH HOH B . G 6 HOH 10 2010 2010 HOH HOH B . G 6 HOH 11 2011 2011 HOH HOH B . G 6 HOH 12 2012 2012 HOH HOH B . G 6 HOH 13 2013 2013 HOH HOH B . G 6 HOH 14 2014 2014 HOH HOH B . G 6 HOH 15 2015 2015 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-31 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-02-28 5 'Structure model' 1 4 2019-05-22 6 'Structure model' 1 5 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Experimental preparation' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' Other 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity_src_gen 3 5 'Structure model' exptl_crystal_grow 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 7 6 'Structure model' pdbx_database_status 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.pdbx_database_id_DOI' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 6 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 7 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 8 4 'Structure model' '_entity_src_gen.pdbx_host_org_vector' 9 5 'Structure model' '_exptl_crystal_grow.temp' 10 6 'Structure model' '_database_2.pdbx_DOI' 11 6 'Structure model' '_database_2.pdbx_database_accession' 12 6 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_entry_details.entry_id 1GZP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES GLYCINE A278 AND PROLINE A279 ARE THE STARTING RESIDUES OF A BIRA TAG (GPGSGGGLNDIFEAQKIEWH) WHICH WAS LOCATED AT THE C-TERMINUS OF THE RECOMBINANT CD1B HEAVY CHAIN. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? 61.41 -125.96 2 1 LEU A 114 ? ? -164.38 118.53 3 1 ASN A 128 ? ? 42.93 79.50 4 1 GLU A 164 ? ? -121.09 -54.64 5 1 ASP B 34 ? ? -41.95 108.47 6 1 GLU B 74 ? ? -51.23 -75.78 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLY 280 ? CA ? A GLY 283 CA 2 1 Y 1 A GLY 280 ? C ? A GLY 283 C 3 1 Y 1 A GLY 280 ? O ? A GLY 283 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -2 ? A MET 1 2 1 Y 1 A GLY -1 ? A GLY 2 3 1 Y 1 A SER 0 ? A SER 3 4 1 Y 1 A GLU 1 ? A GLU 4 5 1 Y 1 A HIS 2 ? A HIS 5 6 1 Y 1 A ALA 3 ? A ALA 6 7 1 Y 1 A SER 281 ? A SER 284 8 1 Y 1 A GLY 282 ? A GLY 285 9 1 Y 1 A GLY 283 ? A GLY 286 10 1 Y 1 A GLY 284 ? A GLY 287 11 1 Y 1 A LEU 285 ? A LEU 288 12 1 Y 1 A ASN 286 ? A ASN 289 13 1 Y 1 A ASP 287 ? A ASP 290 14 1 Y 1 A ILE 288 ? A ILE 291 15 1 Y 1 A PHE 289 ? A PHE 292 16 1 Y 1 A GLU 290 ? A GLU 293 17 1 Y 1 A ALA 291 ? A ALA 294 18 1 Y 1 A GLN 292 ? A GLN 295 19 1 Y 1 A LYS 293 ? A LYS 296 20 1 Y 1 A ILE 294 ? A ILE 297 21 1 Y 1 A GLU 295 ? A GLU 298 22 1 Y 1 A TRP 296 ? A TRP 299 23 1 Y 1 A HIS 297 ? A HIS 300 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 D12 C1 C N N 88 D12 C2 C N N 89 D12 C3 C N N 90 D12 C4 C N N 91 D12 C5 C N N 92 D12 C6 C N N 93 D12 C7 C N N 94 D12 C8 C N N 95 D12 C9 C N N 96 D12 C10 C N N 97 D12 C11 C N N 98 D12 C12 C N N 99 D12 H11 H N N 100 D12 H12 H N N 101 D12 H13 H N N 102 D12 H21 H N N 103 D12 H22 H N N 104 D12 H31 H N N 105 D12 H32 H N N 106 D12 H41 H N N 107 D12 H42 H N N 108 D12 H51 H N N 109 D12 H52 H N N 110 D12 H61 H N N 111 D12 H62 H N N 112 D12 H71 H N N 113 D12 H72 H N N 114 D12 H81 H N N 115 D12 H82 H N N 116 D12 H91 H N N 117 D12 H92 H N N 118 D12 H101 H N N 119 D12 H102 H N N 120 D12 H111 H N N 121 D12 H112 H N N 122 D12 H121 H N N 123 D12 H122 H N N 124 D12 H123 H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 GM2 C1 C N R 175 GM2 O1 O N N 176 GM2 C2 C N R 177 GM2 O5 O N N 178 GM2 CB1 C N N 179 GM2 O2 O N N 180 GM2 C3 C N S 181 GM2 O3 O N N 182 GM2 C4 C N S 183 GM2 O4 O N N 184 GM2 C5 C N R 185 GM2 C6 C N N 186 GM2 O6 O N N 187 GM2 CL6 C N N 188 GM2 CL5 C N N 189 GM2 CL7 C N N 190 GM2 CL4 C N N 191 GM2 CL3 C N N 192 GM2 CL2 C N N 193 GM2 CL1 C N N 194 GM2 CB2 C N S 195 GM2 O O N N 196 GM2 N N N N 197 GM2 CR1 C N S 198 GM2 OR O N N 199 GM2 CR2 C N N 200 GM2 CR3 C N N 201 GM2 CR4 C N N 202 GM2 CR5 C N N 203 GM2 CR6 C N N 204 GM2 CR7 C N N 205 GM2 CR8 C N N 206 GM2 CR9 C N N 207 GM2 CRA C N N 208 GM2 CRB C N N 209 GM2 CRC C N N 210 GM2 CRD C N N 211 GM2 CRE C N N 212 GM2 CRF C N N 213 GM2 CRG C N N 214 GM2 CRH C N N 215 GM2 CL8 C N N 216 GM2 CL9 C N N 217 GM2 CLA C N N 218 GM2 CLB C N N 219 GM2 CLC C N N 220 GM2 CLD C N N 221 GM2 CLE C N N 222 GM2 CLF C N N 223 GM2 CLG C N N 224 GM2 CLH C N N 225 GM2 CLI C N N 226 GM2 H1 H N N 227 GM2 H2 H N N 228 GM2 HB11 H N N 229 GM2 HB12 H N N 230 GM2 HA H N N 231 GM2 H3 H N N 232 GM2 HB H N N 233 GM2 H4 H N N 234 GM2 HC H N N 235 GM2 H5 H N N 236 GM2 H6C1 H N N 237 GM2 H6C2 H N N 238 GM2 H6 H N N 239 GM2 HL61 H N N 240 GM2 HL62 H N N 241 GM2 HL51 H N N 242 GM2 HL52 H N N 243 GM2 HL71 H N N 244 GM2 HL72 H N N 245 GM2 HL41 H N N 246 GM2 HL42 H N N 247 GM2 HL31 H N N 248 GM2 HL32 H N N 249 GM2 HL21 H N N 250 GM2 HL22 H N N 251 GM2 HB2 H N N 252 GM2 H H N N 253 GM2 HR1 H N N 254 GM2 HR H N N 255 GM2 HR21 H N N 256 GM2 HR22 H N N 257 GM2 HR31 H N N 258 GM2 HR32 H N N 259 GM2 HR41 H N N 260 GM2 HR42 H N N 261 GM2 HR51 H N N 262 GM2 HR52 H N N 263 GM2 HR61 H N N 264 GM2 HR62 H N N 265 GM2 HR71 H N N 266 GM2 HR72 H N N 267 GM2 HR81 H N N 268 GM2 HR82 H N N 269 GM2 HR91 H N N 270 GM2 HR92 H N N 271 GM2 "HC'" H N N 272 GM2 HR11 H N N 273 GM2 H0 H N N 274 GM2 H7 H N N 275 GM2 H8 H N N 276 GM2 H9 H N N 277 GM2 H10 H N N 278 GM2 H11 H N N 279 GM2 H12 H N N 280 GM2 H13 H N N 281 GM2 H14 H N N 282 GM2 H15 H N N 283 GM2 H16 H N N 284 GM2 H17 H N N 285 GM2 H18 H N N 286 GM2 H19 H N N 287 GM2 H20 H N N 288 GM2 HL81 H N N 289 GM2 HL82 H N N 290 GM2 HL91 H N N 291 GM2 HL92 H N N 292 GM2 HL11 H N N 293 GM2 HL12 H N N 294 GM2 H21 H N N 295 GM2 H22 H N N 296 GM2 H23 H N N 297 GM2 H24 H N N 298 GM2 H25 H N N 299 GM2 H26 H N N 300 GM2 H27 H N N 301 GM2 H28 H N N 302 GM2 H29 H N N 303 GM2 H30 H N N 304 GM2 H31 H N N 305 GM2 H32 H N N 306 GM2 H33 H N N 307 GM2 H34 H N N 308 GM2 H35 H N N 309 GM2 H36 H N N 310 GM2 H37 H N N 311 HIS N N N N 312 HIS CA C N S 313 HIS C C N N 314 HIS O O N N 315 HIS CB C N N 316 HIS CG C Y N 317 HIS ND1 N Y N 318 HIS CD2 C Y N 319 HIS CE1 C Y N 320 HIS NE2 N Y N 321 HIS OXT O N N 322 HIS H H N N 323 HIS H2 H N N 324 HIS HA H N N 325 HIS HB2 H N N 326 HIS HB3 H N N 327 HIS HD1 H N N 328 HIS HD2 H N N 329 HIS HE1 H N N 330 HIS HE2 H N N 331 HIS HXT H N N 332 HOH O O N N 333 HOH H1 H N N 334 HOH H2 H N N 335 ILE N N N N 336 ILE CA C N S 337 ILE C C N N 338 ILE O O N N 339 ILE CB C N S 340 ILE CG1 C N N 341 ILE CG2 C N N 342 ILE CD1 C N N 343 ILE OXT O N N 344 ILE H H N N 345 ILE H2 H N N 346 ILE HA H N N 347 ILE HB H N N 348 ILE HG12 H N N 349 ILE HG13 H N N 350 ILE HG21 H N N 351 ILE HG22 H N N 352 ILE HG23 H N N 353 ILE HD11 H N N 354 ILE HD12 H N N 355 ILE HD13 H N N 356 ILE HXT H N N 357 LEU N N N N 358 LEU CA C N S 359 LEU C C N N 360 LEU O O N N 361 LEU CB C N N 362 LEU CG C N N 363 LEU CD1 C N N 364 LEU CD2 C N N 365 LEU OXT O N N 366 LEU H H N N 367 LEU H2 H N N 368 LEU HA H N N 369 LEU HB2 H N N 370 LEU HB3 H N N 371 LEU HG H N N 372 LEU HD11 H N N 373 LEU HD12 H N N 374 LEU HD13 H N N 375 LEU HD21 H N N 376 LEU HD22 H N N 377 LEU HD23 H N N 378 LEU HXT H N N 379 LYS N N N N 380 LYS CA C N S 381 LYS C C N N 382 LYS O O N N 383 LYS CB C N N 384 LYS CG C N N 385 LYS CD C N N 386 LYS CE C N N 387 LYS NZ N N N 388 LYS OXT O N N 389 LYS H H N N 390 LYS H2 H N N 391 LYS HA H N N 392 LYS HB2 H N N 393 LYS HB3 H N N 394 LYS HG2 H N N 395 LYS HG3 H N N 396 LYS HD2 H N N 397 LYS HD3 H N N 398 LYS HE2 H N N 399 LYS HE3 H N N 400 LYS HZ1 H N N 401 LYS HZ2 H N N 402 LYS HZ3 H N N 403 LYS HXT H N N 404 MET N N N N 405 MET CA C N S 406 MET C C N N 407 MET O O N N 408 MET CB C N N 409 MET CG C N N 410 MET SD S N N 411 MET CE C N N 412 MET OXT O N N 413 MET H H N N 414 MET H2 H N N 415 MET HA H N N 416 MET HB2 H N N 417 MET HB3 H N N 418 MET HG2 H N N 419 MET HG3 H N N 420 MET HE1 H N N 421 MET HE2 H N N 422 MET HE3 H N N 423 MET HXT H N N 424 PHE N N N N 425 PHE CA C N S 426 PHE C C N N 427 PHE O O N N 428 PHE CB C N N 429 PHE CG C Y N 430 PHE CD1 C Y N 431 PHE CD2 C Y N 432 PHE CE1 C Y N 433 PHE CE2 C Y N 434 PHE CZ C Y N 435 PHE OXT O N N 436 PHE H H N N 437 PHE H2 H N N 438 PHE HA H N N 439 PHE HB2 H N N 440 PHE HB3 H N N 441 PHE HD1 H N N 442 PHE HD2 H N N 443 PHE HE1 H N N 444 PHE HE2 H N N 445 PHE HZ H N N 446 PHE HXT H N N 447 PRO N N N N 448 PRO CA C N S 449 PRO C C N N 450 PRO O O N N 451 PRO CB C N N 452 PRO CG C N N 453 PRO CD C N N 454 PRO OXT O N N 455 PRO H H N N 456 PRO HA H N N 457 PRO HB2 H N N 458 PRO HB3 H N N 459 PRO HG2 H N N 460 PRO HG3 H N N 461 PRO HD2 H N N 462 PRO HD3 H N N 463 PRO HXT H N N 464 SER N N N N 465 SER CA C N S 466 SER C C N N 467 SER O O N N 468 SER CB C N N 469 SER OG O N N 470 SER OXT O N N 471 SER H H N N 472 SER H2 H N N 473 SER HA H N N 474 SER HB2 H N N 475 SER HB3 H N N 476 SER HG H N N 477 SER HXT H N N 478 THR N N N N 479 THR CA C N S 480 THR C C N N 481 THR O O N N 482 THR CB C N R 483 THR OG1 O N N 484 THR CG2 C N N 485 THR OXT O N N 486 THR H H N N 487 THR H2 H N N 488 THR HA H N N 489 THR HB H N N 490 THR HG1 H N N 491 THR HG21 H N N 492 THR HG22 H N N 493 THR HG23 H N N 494 THR HXT H N N 495 TRP N N N N 496 TRP CA C N S 497 TRP C C N N 498 TRP O O N N 499 TRP CB C N N 500 TRP CG C Y N 501 TRP CD1 C Y N 502 TRP CD2 C Y N 503 TRP NE1 N Y N 504 TRP CE2 C Y N 505 TRP CE3 C Y N 506 TRP CZ2 C Y N 507 TRP CZ3 C Y N 508 TRP CH2 C Y N 509 TRP OXT O N N 510 TRP H H N N 511 TRP H2 H N N 512 TRP HA H N N 513 TRP HB2 H N N 514 TRP HB3 H N N 515 TRP HD1 H N N 516 TRP HE1 H N N 517 TRP HE3 H N N 518 TRP HZ2 H N N 519 TRP HZ3 H N N 520 TRP HH2 H N N 521 TRP HXT H N N 522 TWT C1 C N N 523 TWT C2 C N N 524 TWT C3 C N N 525 TWT C4 C N N 526 TWT C5 C N N 527 TWT C6 C N N 528 TWT C7 C N N 529 TWT C8 C N N 530 TWT C9 C N N 531 TWT C10 C N N 532 TWT C11 C N N 533 TWT C12 C N N 534 TWT C13 C N N 535 TWT C14 C N N 536 TWT C15 C N N 537 TWT C16 C N N 538 TWT C17 C N N 539 TWT C18 C N N 540 TWT C19 C N N 541 TWT C20 C N N 542 TWT C21 C N N 543 TWT C22 C N N 544 TWT H1C1 H N N 545 TWT H1C2 H N N 546 TWT H1C3 H N N 547 TWT H2C1 H N N 548 TWT H2C2 H N N 549 TWT H3C1 H N N 550 TWT H3C2 H N N 551 TWT H4C1 H N N 552 TWT H4C2 H N N 553 TWT H5C1 H N N 554 TWT H5C2 H N N 555 TWT H6C1 H N N 556 TWT H6C2 H N N 557 TWT H7C1 H N N 558 TWT H7C2 H N N 559 TWT H8C1 H N N 560 TWT H8C2 H N N 561 TWT H9C1 H N N 562 TWT H9C2 H N N 563 TWT H101 H N N 564 TWT H102 H N N 565 TWT H111 H N N 566 TWT H112 H N N 567 TWT H121 H N N 568 TWT H122 H N N 569 TWT H131 H N N 570 TWT H132 H N N 571 TWT H141 H N N 572 TWT H142 H N N 573 TWT H151 H N N 574 TWT H152 H N N 575 TWT H161 H N N 576 TWT H162 H N N 577 TWT H171 H N N 578 TWT H172 H N N 579 TWT H181 H N N 580 TWT H182 H N N 581 TWT H191 H N N 582 TWT H192 H N N 583 TWT H201 H N N 584 TWT H202 H N N 585 TWT H211 H N N 586 TWT H212 H N N 587 TWT H221 H N N 588 TWT H222 H N N 589 TWT H223 H N N 590 TYR N N N N 591 TYR CA C N S 592 TYR C C N N 593 TYR O O N N 594 TYR CB C N N 595 TYR CG C Y N 596 TYR CD1 C Y N 597 TYR CD2 C Y N 598 TYR CE1 C Y N 599 TYR CE2 C Y N 600 TYR CZ C Y N 601 TYR OH O N N 602 TYR OXT O N N 603 TYR H H N N 604 TYR H2 H N N 605 TYR HA H N N 606 TYR HB2 H N N 607 TYR HB3 H N N 608 TYR HD1 H N N 609 TYR HD2 H N N 610 TYR HE1 H N N 611 TYR HE2 H N N 612 TYR HH H N N 613 TYR HXT H N N 614 VAL N N N N 615 VAL CA C N S 616 VAL C C N N 617 VAL O O N N 618 VAL CB C N N 619 VAL CG1 C N N 620 VAL CG2 C N N 621 VAL OXT O N N 622 VAL H H N N 623 VAL H2 H N N 624 VAL HA H N N 625 VAL HB H N N 626 VAL HG11 H N N 627 VAL HG12 H N N 628 VAL HG13 H N N 629 VAL HG21 H N N 630 VAL HG22 H N N 631 VAL HG23 H N N 632 VAL HXT H N N 633 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 D12 C1 C2 sing N N 83 D12 C1 H11 sing N N 84 D12 C1 H12 sing N N 85 D12 C1 H13 sing N N 86 D12 C2 C3 sing N N 87 D12 C2 H21 sing N N 88 D12 C2 H22 sing N N 89 D12 C3 C4 sing N N 90 D12 C3 H31 sing N N 91 D12 C3 H32 sing N N 92 D12 C4 C5 sing N N 93 D12 C4 H41 sing N N 94 D12 C4 H42 sing N N 95 D12 C5 C6 sing N N 96 D12 C5 H51 sing N N 97 D12 C5 H52 sing N N 98 D12 C6 C7 sing N N 99 D12 C6 H61 sing N N 100 D12 C6 H62 sing N N 101 D12 C7 C8 sing N N 102 D12 C7 H71 sing N N 103 D12 C7 H72 sing N N 104 D12 C8 C9 sing N N 105 D12 C8 H81 sing N N 106 D12 C8 H82 sing N N 107 D12 C9 C10 sing N N 108 D12 C9 H91 sing N N 109 D12 C9 H92 sing N N 110 D12 C10 C11 sing N N 111 D12 C10 H101 sing N N 112 D12 C10 H102 sing N N 113 D12 C11 C12 sing N N 114 D12 C11 H111 sing N N 115 D12 C11 H112 sing N N 116 D12 C12 H121 sing N N 117 D12 C12 H122 sing N N 118 D12 C12 H123 sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 GM2 C1 O1 sing N N 166 GM2 C1 C2 sing N N 167 GM2 C1 O5 sing N N 168 GM2 C1 H1 sing N N 169 GM2 O1 CB1 sing N N 170 GM2 C2 O2 sing N N 171 GM2 C2 C3 sing N N 172 GM2 C2 H2 sing N N 173 GM2 O5 C5 sing N N 174 GM2 CB1 CB2 sing N N 175 GM2 CB1 HB11 sing N N 176 GM2 CB1 HB12 sing N N 177 GM2 O2 HA sing N N 178 GM2 C3 O3 sing N N 179 GM2 C3 C4 sing N N 180 GM2 C3 H3 sing N N 181 GM2 O3 HB sing N N 182 GM2 C4 O4 sing N N 183 GM2 C4 C5 sing N N 184 GM2 C4 H4 sing N N 185 GM2 O4 HC sing N N 186 GM2 C5 C6 sing N N 187 GM2 C5 H5 sing N N 188 GM2 C6 O6 sing N N 189 GM2 C6 H6C1 sing N N 190 GM2 C6 H6C2 sing N N 191 GM2 O6 H6 sing N N 192 GM2 CL6 CL5 sing N N 193 GM2 CL6 CL7 sing N N 194 GM2 CL6 HL61 sing N N 195 GM2 CL6 HL62 sing N N 196 GM2 CL5 CL4 sing N N 197 GM2 CL5 HL51 sing N N 198 GM2 CL5 HL52 sing N N 199 GM2 CL7 CL8 sing N N 200 GM2 CL7 HL71 sing N N 201 GM2 CL7 HL72 sing N N 202 GM2 CL4 CL3 sing N N 203 GM2 CL4 HL41 sing N N 204 GM2 CL4 HL42 sing N N 205 GM2 CL3 CL2 sing N N 206 GM2 CL3 HL31 sing N N 207 GM2 CL3 HL32 sing N N 208 GM2 CL2 CL1 sing N N 209 GM2 CL2 HL21 sing N N 210 GM2 CL2 HL22 sing N N 211 GM2 CL1 O doub N N 212 GM2 CL1 N sing N N 213 GM2 CB2 N sing N N 214 GM2 CB2 CR1 sing N N 215 GM2 CB2 HB2 sing N N 216 GM2 N H sing N N 217 GM2 CR1 OR sing N N 218 GM2 CR1 CR2 sing N N 219 GM2 CR1 HR1 sing N N 220 GM2 OR HR sing N N 221 GM2 CR2 CR3 sing N N 222 GM2 CR2 HR21 sing N N 223 GM2 CR2 HR22 sing N N 224 GM2 CR3 CR4 sing N N 225 GM2 CR3 HR31 sing N N 226 GM2 CR3 HR32 sing N N 227 GM2 CR4 CR5 sing N N 228 GM2 CR4 HR41 sing N N 229 GM2 CR4 HR42 sing N N 230 GM2 CR5 CR6 sing N N 231 GM2 CR5 HR51 sing N N 232 GM2 CR5 HR52 sing N N 233 GM2 CR6 CR7 sing N N 234 GM2 CR6 HR61 sing N N 235 GM2 CR6 HR62 sing N N 236 GM2 CR7 CR8 sing N N 237 GM2 CR7 HR71 sing N N 238 GM2 CR7 HR72 sing N N 239 GM2 CR8 CR9 sing N N 240 GM2 CR8 HR81 sing N N 241 GM2 CR8 HR82 sing N N 242 GM2 CR9 CRA sing N N 243 GM2 CR9 HR91 sing N N 244 GM2 CR9 HR92 sing N N 245 GM2 CRA CRB sing N N 246 GM2 CRA "HC'" sing N N 247 GM2 CRA HR11 sing N N 248 GM2 CRB CRC sing N N 249 GM2 CRB H0 sing N N 250 GM2 CRB H7 sing N N 251 GM2 CRC CRD sing N N 252 GM2 CRC H8 sing N N 253 GM2 CRC H9 sing N N 254 GM2 CRD CRE sing N N 255 GM2 CRD H10 sing N N 256 GM2 CRD H11 sing N N 257 GM2 CRE CRF sing N N 258 GM2 CRE H12 sing N N 259 GM2 CRE H13 sing N N 260 GM2 CRF CRG sing N N 261 GM2 CRF H14 sing N N 262 GM2 CRF H15 sing N N 263 GM2 CRG CRH sing N N 264 GM2 CRG H16 sing N N 265 GM2 CRG H17 sing N N 266 GM2 CRH H18 sing N N 267 GM2 CRH H19 sing N N 268 GM2 CRH H20 sing N N 269 GM2 CL8 CL9 sing N N 270 GM2 CL8 HL81 sing N N 271 GM2 CL8 HL82 sing N N 272 GM2 CL9 CLA sing N N 273 GM2 CL9 HL91 sing N N 274 GM2 CL9 HL92 sing N N 275 GM2 CLA CLB sing N N 276 GM2 CLA HL11 sing N N 277 GM2 CLA HL12 sing N N 278 GM2 CLB CLC sing N N 279 GM2 CLB H21 sing N N 280 GM2 CLB H22 sing N N 281 GM2 CLC CLD sing N N 282 GM2 CLC H23 sing N N 283 GM2 CLC H24 sing N N 284 GM2 CLD CLE sing N N 285 GM2 CLD H25 sing N N 286 GM2 CLD H26 sing N N 287 GM2 CLE CLF sing N N 288 GM2 CLE H27 sing N N 289 GM2 CLE H28 sing N N 290 GM2 CLF CLG sing N N 291 GM2 CLF H29 sing N N 292 GM2 CLF H30 sing N N 293 GM2 CLG CLH sing N N 294 GM2 CLG H31 sing N N 295 GM2 CLG H32 sing N N 296 GM2 CLH CLI sing N N 297 GM2 CLH H33 sing N N 298 GM2 CLH H34 sing N N 299 GM2 CLI H35 sing N N 300 GM2 CLI H36 sing N N 301 GM2 CLI H37 sing N N 302 HIS N CA sing N N 303 HIS N H sing N N 304 HIS N H2 sing N N 305 HIS CA C sing N N 306 HIS CA CB sing N N 307 HIS CA HA sing N N 308 HIS C O doub N N 309 HIS C OXT sing N N 310 HIS CB CG sing N N 311 HIS CB HB2 sing N N 312 HIS CB HB3 sing N N 313 HIS CG ND1 sing Y N 314 HIS CG CD2 doub Y N 315 HIS ND1 CE1 doub Y N 316 HIS ND1 HD1 sing N N 317 HIS CD2 NE2 sing Y N 318 HIS CD2 HD2 sing N N 319 HIS CE1 NE2 sing Y N 320 HIS CE1 HE1 sing N N 321 HIS NE2 HE2 sing N N 322 HIS OXT HXT sing N N 323 HOH O H1 sing N N 324 HOH O H2 sing N N 325 ILE N CA sing N N 326 ILE N H sing N N 327 ILE N H2 sing N N 328 ILE CA C sing N N 329 ILE CA CB sing N N 330 ILE CA HA sing N N 331 ILE C O doub N N 332 ILE C OXT sing N N 333 ILE CB CG1 sing N N 334 ILE CB CG2 sing N N 335 ILE CB HB sing N N 336 ILE CG1 CD1 sing N N 337 ILE CG1 HG12 sing N N 338 ILE CG1 HG13 sing N N 339 ILE CG2 HG21 sing N N 340 ILE CG2 HG22 sing N N 341 ILE CG2 HG23 sing N N 342 ILE CD1 HD11 sing N N 343 ILE CD1 HD12 sing N N 344 ILE CD1 HD13 sing N N 345 ILE OXT HXT sing N N 346 LEU N CA sing N N 347 LEU N H sing N N 348 LEU N H2 sing N N 349 LEU CA C sing N N 350 LEU CA CB sing N N 351 LEU CA HA sing N N 352 LEU C O doub N N 353 LEU C OXT sing N N 354 LEU CB CG sing N N 355 LEU CB HB2 sing N N 356 LEU CB HB3 sing N N 357 LEU CG CD1 sing N N 358 LEU CG CD2 sing N N 359 LEU CG HG sing N N 360 LEU CD1 HD11 sing N N 361 LEU CD1 HD12 sing N N 362 LEU CD1 HD13 sing N N 363 LEU CD2 HD21 sing N N 364 LEU CD2 HD22 sing N N 365 LEU CD2 HD23 sing N N 366 LEU OXT HXT sing N N 367 LYS N CA sing N N 368 LYS N H sing N N 369 LYS N H2 sing N N 370 LYS CA C sing N N 371 LYS CA CB sing N N 372 LYS CA HA sing N N 373 LYS C O doub N N 374 LYS C OXT sing N N 375 LYS CB CG sing N N 376 LYS CB HB2 sing N N 377 LYS CB HB3 sing N N 378 LYS CG CD sing N N 379 LYS CG HG2 sing N N 380 LYS CG HG3 sing N N 381 LYS CD CE sing N N 382 LYS CD HD2 sing N N 383 LYS CD HD3 sing N N 384 LYS CE NZ sing N N 385 LYS CE HE2 sing N N 386 LYS CE HE3 sing N N 387 LYS NZ HZ1 sing N N 388 LYS NZ HZ2 sing N N 389 LYS NZ HZ3 sing N N 390 LYS OXT HXT sing N N 391 MET N CA sing N N 392 MET N H sing N N 393 MET N H2 sing N N 394 MET CA C sing N N 395 MET CA CB sing N N 396 MET CA HA sing N N 397 MET C O doub N N 398 MET C OXT sing N N 399 MET CB CG sing N N 400 MET CB HB2 sing N N 401 MET CB HB3 sing N N 402 MET CG SD sing N N 403 MET CG HG2 sing N N 404 MET CG HG3 sing N N 405 MET SD CE sing N N 406 MET CE HE1 sing N N 407 MET CE HE2 sing N N 408 MET CE HE3 sing N N 409 MET OXT HXT sing N N 410 PHE N CA sing N N 411 PHE N H sing N N 412 PHE N H2 sing N N 413 PHE CA C sing N N 414 PHE CA CB sing N N 415 PHE CA HA sing N N 416 PHE C O doub N N 417 PHE C OXT sing N N 418 PHE CB CG sing N N 419 PHE CB HB2 sing N N 420 PHE CB HB3 sing N N 421 PHE CG CD1 doub Y N 422 PHE CG CD2 sing Y N 423 PHE CD1 CE1 sing Y N 424 PHE CD1 HD1 sing N N 425 PHE CD2 CE2 doub Y N 426 PHE CD2 HD2 sing N N 427 PHE CE1 CZ doub Y N 428 PHE CE1 HE1 sing N N 429 PHE CE2 CZ sing Y N 430 PHE CE2 HE2 sing N N 431 PHE CZ HZ sing N N 432 PHE OXT HXT sing N N 433 PRO N CA sing N N 434 PRO N CD sing N N 435 PRO N H sing N N 436 PRO CA C sing N N 437 PRO CA CB sing N N 438 PRO CA HA sing N N 439 PRO C O doub N N 440 PRO C OXT sing N N 441 PRO CB CG sing N N 442 PRO CB HB2 sing N N 443 PRO CB HB3 sing N N 444 PRO CG CD sing N N 445 PRO CG HG2 sing N N 446 PRO CG HG3 sing N N 447 PRO CD HD2 sing N N 448 PRO CD HD3 sing N N 449 PRO OXT HXT sing N N 450 SER N CA sing N N 451 SER N H sing N N 452 SER N H2 sing N N 453 SER CA C sing N N 454 SER CA CB sing N N 455 SER CA HA sing N N 456 SER C O doub N N 457 SER C OXT sing N N 458 SER CB OG sing N N 459 SER CB HB2 sing N N 460 SER CB HB3 sing N N 461 SER OG HG sing N N 462 SER OXT HXT sing N N 463 THR N CA sing N N 464 THR N H sing N N 465 THR N H2 sing N N 466 THR CA C sing N N 467 THR CA CB sing N N 468 THR CA HA sing N N 469 THR C O doub N N 470 THR C OXT sing N N 471 THR CB OG1 sing N N 472 THR CB CG2 sing N N 473 THR CB HB sing N N 474 THR OG1 HG1 sing N N 475 THR CG2 HG21 sing N N 476 THR CG2 HG22 sing N N 477 THR CG2 HG23 sing N N 478 THR OXT HXT sing N N 479 TRP N CA sing N N 480 TRP N H sing N N 481 TRP N H2 sing N N 482 TRP CA C sing N N 483 TRP CA CB sing N N 484 TRP CA HA sing N N 485 TRP C O doub N N 486 TRP C OXT sing N N 487 TRP CB CG sing N N 488 TRP CB HB2 sing N N 489 TRP CB HB3 sing N N 490 TRP CG CD1 doub Y N 491 TRP CG CD2 sing Y N 492 TRP CD1 NE1 sing Y N 493 TRP CD1 HD1 sing N N 494 TRP CD2 CE2 doub Y N 495 TRP CD2 CE3 sing Y N 496 TRP NE1 CE2 sing Y N 497 TRP NE1 HE1 sing N N 498 TRP CE2 CZ2 sing Y N 499 TRP CE3 CZ3 doub Y N 500 TRP CE3 HE3 sing N N 501 TRP CZ2 CH2 doub Y N 502 TRP CZ2 HZ2 sing N N 503 TRP CZ3 CH2 sing Y N 504 TRP CZ3 HZ3 sing N N 505 TRP CH2 HH2 sing N N 506 TRP OXT HXT sing N N 507 TWT C1 C2 sing N N 508 TWT C1 H1C1 sing N N 509 TWT C1 H1C2 sing N N 510 TWT C1 H1C3 sing N N 511 TWT C2 C3 sing N N 512 TWT C2 H2C1 sing N N 513 TWT C2 H2C2 sing N N 514 TWT C3 C4 sing N N 515 TWT C3 H3C1 sing N N 516 TWT C3 H3C2 sing N N 517 TWT C4 C5 sing N N 518 TWT C4 H4C1 sing N N 519 TWT C4 H4C2 sing N N 520 TWT C5 C6 sing N N 521 TWT C5 H5C1 sing N N 522 TWT C5 H5C2 sing N N 523 TWT C6 C7 sing N N 524 TWT C6 H6C1 sing N N 525 TWT C6 H6C2 sing N N 526 TWT C7 C8 sing N N 527 TWT C7 H7C1 sing N N 528 TWT C7 H7C2 sing N N 529 TWT C8 C9 sing N N 530 TWT C8 H8C1 sing N N 531 TWT C8 H8C2 sing N N 532 TWT C9 C10 sing N N 533 TWT C9 H9C1 sing N N 534 TWT C9 H9C2 sing N N 535 TWT C10 C11 sing N N 536 TWT C10 H101 sing N N 537 TWT C10 H102 sing N N 538 TWT C11 C12 sing N N 539 TWT C11 H111 sing N N 540 TWT C11 H112 sing N N 541 TWT C12 C13 sing N N 542 TWT C12 H121 sing N N 543 TWT C12 H122 sing N N 544 TWT C13 C14 sing N N 545 TWT C13 H131 sing N N 546 TWT C13 H132 sing N N 547 TWT C14 C15 sing N N 548 TWT C14 H141 sing N N 549 TWT C14 H142 sing N N 550 TWT C15 C16 sing N N 551 TWT C15 H151 sing N N 552 TWT C15 H152 sing N N 553 TWT C16 C17 sing N N 554 TWT C16 H161 sing N N 555 TWT C16 H162 sing N N 556 TWT C17 C18 sing N N 557 TWT C17 H171 sing N N 558 TWT C17 H172 sing N N 559 TWT C18 C19 sing N N 560 TWT C18 H181 sing N N 561 TWT C18 H182 sing N N 562 TWT C19 C20 sing N N 563 TWT C19 H191 sing N N 564 TWT C19 H192 sing N N 565 TWT C20 C21 sing N N 566 TWT C20 H201 sing N N 567 TWT C20 H202 sing N N 568 TWT C21 C22 sing N N 569 TWT C21 H211 sing N N 570 TWT C21 H212 sing N N 571 TWT C22 H221 sing N N 572 TWT C22 H222 sing N N 573 TWT C22 H223 sing N N 574 TYR N CA sing N N 575 TYR N H sing N N 576 TYR N H2 sing N N 577 TYR CA C sing N N 578 TYR CA CB sing N N 579 TYR CA HA sing N N 580 TYR C O doub N N 581 TYR C OXT sing N N 582 TYR CB CG sing N N 583 TYR CB HB2 sing N N 584 TYR CB HB3 sing N N 585 TYR CG CD1 doub Y N 586 TYR CG CD2 sing Y N 587 TYR CD1 CE1 sing Y N 588 TYR CD1 HD1 sing N N 589 TYR CD2 CE2 doub Y N 590 TYR CD2 HD2 sing N N 591 TYR CE1 CZ doub Y N 592 TYR CE1 HE1 sing N N 593 TYR CE2 CZ sing Y N 594 TYR CE2 HE2 sing N N 595 TYR CZ OH sing N N 596 TYR OH HH sing N N 597 TYR OXT HXT sing N N 598 VAL N CA sing N N 599 VAL N H sing N N 600 VAL N H2 sing N N 601 VAL CA C sing N N 602 VAL CA CB sing N N 603 VAL CA HA sing N N 604 VAL C O doub N N 605 VAL C OXT sing N N 606 VAL CB CG1 sing N N 607 VAL CB CG2 sing N N 608 VAL CB HB sing N N 609 VAL CG1 HG11 sing N N 610 VAL CG1 HG12 sing N N 611 VAL CG1 HG13 sing N N 612 VAL CG2 HG21 sing N N 613 VAL CG2 HG22 sing N N 614 VAL CG2 HG23 sing N N 615 VAL OXT HXT sing N N 616 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;N-[(1S,2S)-2-HYDROXY-1-({[(2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2-YL]OXY}METHYL)OCTADECYL]OCTADECANAMIDE ; GM2 4 DODECANE D12 5 DOCOSANE TWT 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1CD1 _pdbx_initial_refinement_model.details ? #