HEADER LYASE 27-JUN-02 1H0S TITLE 3-DEHYDROQUINATE DEHYDRATASE FROM MYCOBACTERIUM TUBERCULOSIS IN TITLE 2 COMPLEX WITH 3-HYDROXYIMINO-QUINIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-DEHYDROQUINATE DEHYDRATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-DEHYDROQUINASE, TYPE II DHQASE; COMPND 5 EC: 4.2.1.10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-15B; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MPET KEYWDS LYASE, SHIKIMATE PATHWAY, ALPHA/BETA PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.W.ROSZAK,M.FREDERICKSON,C.ABELL,J.R.COGGINS,A.J.LAPTHORN REVDAT 5 13-DEC-23 1H0S 1 REMARK REVDAT 4 12-OCT-11 1H0S 1 HEADER KEYWDS REMARK DBREF REVDAT 4 2 1 HETSYN FORMUL VERSN REVDAT 3 24-FEB-09 1H0S 1 VERSN REVDAT 2 21-MAY-04 1H0S 1 AUTHOR REVDAT 1 17-JUL-03 1H0S 0 JRNL AUTH D.A.ROBINSON,A.W.ROSZAK,M.FREDERICKSON,C.ABELL,J.R.COGGINS, JRNL AUTH 2 A.J.LAPTHORN JRNL TITL STRUCTURAL BASIS FOR SPECIFICITY OF OXIME BASED INHIBITORS JRNL TITL 2 TOWARDS TYPE II DEHYDROQUINASE FROM MYCOBACTERIUM JRNL TITL 3 TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.G.GOURLEY,A.K.SHRIVE,I.POLIKARPOV,T.KRELL,J.R.COGGINS, REMARK 1 AUTH 2 A.R.HAWKINS,N.W.ISAACS,L.SAWYER REMARK 1 TITL THE TWO TYPES OF 3-DEHYDROQUINASE HAVE DISTINCT STRUCTURES REMARK 1 TITL 2 BUT CATALYZE THE SAME OVERALL REACTION. REMARK 1 REF NAT.STRUCT.BIOL. V. 6 521 1999 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 10360352 REMARK 1 DOI 10.1038/9287 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 15717 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1777 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1043 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.739 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 20-25 ARE DISORDERED REMARK 4 REMARK 4 1H0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUN-02. REMARK 100 THE DEPOSITION ID IS D_1290011041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117533 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.80800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2DHQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% ME2KPEG,0.5M AMMONIUM SULPHATE REMARK 280 0.1M MOPS PH 6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z+1/2 REMARK 290 15555 -X,Y+1/2,-Z+1/2 REMARK 290 16555 X,-Y+1/2,-Z+1/2 REMARK 290 17555 Z,X+1/2,Y+1/2 REMARK 290 18555 Z,-X+1/2,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y+1/2 REMARK 290 20555 -Z,X+1/2,-Y+1/2 REMARK 290 21555 Y,Z+1/2,X+1/2 REMARK 290 22555 -Y,Z+1/2,-X+1/2 REMARK 290 23555 Y,-Z+1/2,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X+1/2 REMARK 290 25555 X+1/2,Y,Z+1/2 REMARK 290 26555 -X+1/2,-Y,Z+1/2 REMARK 290 27555 -X+1/2,Y,-Z+1/2 REMARK 290 28555 X+1/2,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X,Y+1/2 REMARK 290 30555 Z+1/2,-X,-Y+1/2 REMARK 290 31555 -Z+1/2,-X,Y+1/2 REMARK 290 32555 -Z+1/2,X,-Y+1/2 REMARK 290 33555 Y+1/2,Z,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X+1/2 REMARK 290 35555 Y+1/2,-Z,-X+1/2 REMARK 290 36555 -Y+1/2,-Z,X+1/2 REMARK 290 37555 X+1/2,Y+1/2,Z REMARK 290 38555 -X+1/2,-Y+1/2,Z REMARK 290 39555 -X+1/2,Y+1/2,-Z REMARK 290 40555 X+1/2,-Y+1/2,-Z REMARK 290 41555 Z+1/2,X+1/2,Y REMARK 290 42555 Z+1/2,-X+1/2,-Y REMARK 290 43555 -Z+1/2,-X+1/2,Y REMARK 290 44555 -Z+1/2,X+1/2,-Y REMARK 290 45555 Y+1/2,Z+1/2,X REMARK 290 46555 -Y+1/2,Z+1/2,-X REMARK 290 47555 Y+1/2,-Z+1/2,-X REMARK 290 48555 -Y+1/2,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY1 37 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 37 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY3 37 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 38 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 38 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY3 38 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 39 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 39 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY3 39 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 40 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY2 40 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY3 40 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 41 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY2 41 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 41 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 42 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY2 42 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 42 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 43 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY2 43 -1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 43 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 44 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY2 44 1.000000 0.000000 0.000000 63.42800 REMARK 290 SMTRY3 44 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 45 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY2 45 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY3 45 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 46 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY2 46 0.000000 0.000000 1.000000 63.42800 REMARK 290 SMTRY3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 47 0.000000 1.000000 0.000000 63.42800 REMARK 290 SMTRY2 47 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY3 47 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 48 0.000000 -1.000000 0.000000 63.42800 REMARK 290 SMTRY2 48 0.000000 0.000000 -1.000000 63.42800 REMARK 290 SMTRY3 48 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 42480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -658.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 63.42800 REMARK 350 BIOMT2 2 0.000000 0.000000 -1.000000 63.42800 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 63.42800 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 -63.42800 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 126.85600 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 -1.000000 0.000000 63.42800 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 63.42800 REMARK 350 BIOMT3 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 1.000000 0.000000 -63.42800 REMARK 350 BIOMT2 6 0.000000 0.000000 -1.000000 63.42800 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 0.000000 -1.000000 0.000000 126.85600 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 9 -1.000000 0.000000 0.000000 63.42800 REMARK 350 BIOMT3 9 0.000000 1.000000 0.000000 -63.42800 REMARK 350 BIOMT1 10 0.000000 1.000000 0.000000 -63.42800 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 63.42800 REMARK 350 BIOMT3 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 11 1.000000 0.000000 0.000000 63.42800 REMARK 350 BIOMT3 11 0.000000 -1.000000 0.000000 63.42800 REMARK 350 BIOMT1 12 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 12 -1.000000 0.000000 0.000000 63.42800 REMARK 350 BIOMT3 12 0.000000 -1.000000 0.000000 63.42800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2049 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2092 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2119 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2138 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2165 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLU A 20 REMARK 465 PRO A 21 REMARK 465 ALA A 22 REMARK 465 VAL A 23 REMARK 465 TYR A 24 REMARK 465 GLY A 25 REMARK 465 GLY A 145 REMARK 465 THR A 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 133 CB TYR A 133 CG -0.102 REMARK 500 TYR A 133 CG TYR A 133 CD2 -0.176 REMARK 500 TYR A 133 CG TYR A 133 CD1 -0.155 REMARK 500 TYR A 133 CD1 TYR A 133 CE1 0.742 REMARK 500 TYR A 133 CE1 TYR A 133 CZ -0.224 REMARK 500 TYR A 133 CZ TYR A 133 OH -0.151 REMARK 500 TYR A 133 CZ TYR A 133 CE2 -0.200 REMARK 500 TYR A 133 CE2 TYR A 133 CD2 0.704 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 50 CG - CD - NE ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG A 50 CD - NE - CZ ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 50 NE - CZ - NH1 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 50 NE - CZ - NH2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 53 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ILE A 130 CG1 - CB - CG2 ANGL. DEV. = 13.4 DEGREES REMARK 500 TYR A 133 CB - CG - CD2 ANGL. DEV. = 16.8 DEGREES REMARK 500 TYR A 133 CD1 - CG - CD2 ANGL. DEV. = -34.0 DEGREES REMARK 500 TYR A 133 CB - CG - CD1 ANGL. DEV. = 17.3 DEGREES REMARK 500 TYR A 133 CG - CD1 - CE1 ANGL. DEV. = -30.9 DEGREES REMARK 500 TYR A 133 CG - CD2 - CE2 ANGL. DEV. = -28.2 DEGREES REMARK 500 TYR A 133 CD1 - CE1 - CZ ANGL. DEV. = -22.8 DEGREES REMARK 500 TYR A 133 OH - CZ - CE2 ANGL. DEV. = 23.6 DEGREES REMARK 500 TYR A 133 CE1 - CZ - OH ANGL. DEV. = 21.3 DEGREES REMARK 500 TYR A 133 CE1 - CZ - CE2 ANGL. DEV. = -45.0 DEGREES REMARK 500 TYR A 133 CZ - CE2 - CD2 ANGL. DEV. = -24.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 12 -6.14 79.51 REMARK 500 ARG A 18 -10.58 -140.62 REMARK 500 ARG A 108 -155.55 -115.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A2029 DISTANCE = 6.62 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FA6 A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H05 RELATED DB: PDB REMARK 900 3-DEHYDROQUINATE DEHYDRATASE FROM MYCOBACTERIUM TUBERCULOSIS IN REMARK 900 COMPLEX WITH SULPHATE REMARK 900 RELATED ID: 2DHQ RELATED DB: PDB REMARK 900 3-DEHYDROQUINATE DEHYDRATASE FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 RELATED ID: 1H0R RELATED DB: PDB REMARK 900 TYPE II DEHYDROQUINASE FROM MYCOBACTERIUM TUBERCULOSIS COMPLEXED REMARK 900 WITH 2,3-ANNHYDRO-QUINIC ACID DBREF 1H0S A 1 146 UNP P0A4Z6 AROQ_MYCTU 2 147 SEQRES 1 A 146 SER GLU LEU ILE VAL ASN VAL ILE ASN GLY PRO ASN LEU SEQRES 2 A 146 GLY ARG LEU GLY ARG ARG GLU PRO ALA VAL TYR GLY GLY SEQRES 3 A 146 THR THR HIS ASP GLU LEU VAL ALA LEU ILE GLU ARG GLU SEQRES 4 A 146 ALA ALA GLU LEU GLY LEU LYS ALA VAL VAL ARG GLN SER SEQRES 5 A 146 ASP SER GLU ALA GLN LEU LEU ASP TRP ILE HIS GLN ALA SEQRES 6 A 146 ALA ASP ALA ALA GLU PRO VAL ILE LEU ASN ALA GLY GLY SEQRES 7 A 146 LEU THR HIS THR SER VAL ALA LEU ARG ASP ALA CYS ALA SEQRES 8 A 146 GLU LEU SER ALA PRO LEU ILE GLU VAL HIS ILE SER ASN SEQRES 9 A 146 VAL HIS ALA ARG GLU GLU PHE ARG ARG HIS SER TYR LEU SEQRES 10 A 146 SER PRO ILE ALA THR GLY VAL ILE VAL GLY LEU GLY ILE SEQRES 11 A 146 GLN GLY TYR LEU LEU ALA LEU ARG TYR LEU ALA GLU HIS SEQRES 12 A 146 VAL GLY THR HET FA6 A 200 14 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET GOL A 204 6 HET GOL A 205 6 HET GOL A 206 6 HETNAM FA6 3-HYDROXYIMINO QUINIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FA6 C7 H11 N O6 FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 9 HOH *186(H2 O) HELIX 1 1 ASN A 12 LEU A 16 5 5 HELIX 2 2 THR A 28 GLY A 44 1 17 HELIX 3 3 SER A 54 ALA A 69 1 16 HELIX 4 4 ALA A 76 THR A 82 5 7 HELIX 5 5 SER A 83 GLU A 92 1 10 HELIX 6 6 ASN A 104 ARG A 108 5 5 HELIX 7 7 GLU A 109 HIS A 114 5 6 HELIX 8 8 ILE A 130 HIS A 143 1 14 SHEET 1 AA 5 LYS A 46 GLN A 51 0 SHEET 2 AA 5 ILE A 4 ASN A 9 1 O VAL A 5 N VAL A 48 SHEET 3 AA 5 VAL A 72 ASN A 75 1 O ILE A 73 N ILE A 8 SHEET 4 AA 5 LEU A 97 HIS A 101 1 O ILE A 98 N LEU A 74 SHEET 5 AA 5 GLY A 123 VAL A 126 1 O GLY A 123 N GLU A 99 SITE 1 AC1 3 SER A 54 HOH A2173 HOH A2174 SITE 1 AC2 11 ARG A 87 GLU A 109 PHE A 111 ARG A 113 SITE 2 AC2 11 PRO A 119 HOH A2175 HOH A2176 HOH A2177 SITE 3 AC2 11 HOH A2178 HOH A2179 HOH A2184 SITE 1 AC3 5 TRP A 61 GLN A 64 HOH A2094 HOH A2180 SITE 2 AC3 5 HOH A2181 SITE 1 AC4 13 PRO A 11 LEU A 13 ARG A 19 ASN A 75 SITE 2 AC4 13 GLY A 77 GLY A 78 HIS A 81 ASP A 88 SITE 3 AC4 13 HIS A 101 ILE A 102 SER A 103 ARG A 112 SITE 4 AC4 13 HOH A2172 SITE 1 AC5 6 LEU A 128 GLY A 129 ILE A 130 GLN A 131 SITE 2 AC5 6 HIS A 143 HOH A2182 SITE 1 AC6 9 HIS A 81 HIS A 114 SER A 115 TYR A 116 SITE 2 AC6 9 HOH A2151 HOH A2177 HOH A2184 HOH A2185 SITE 3 AC6 9 HOH A2186 SITE 1 AC7 3 LYS A 46 ALA A 47 ARG A 50 CRYST1 126.856 126.856 126.856 90.00 90.00 90.00 F 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007883 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007883 0.00000