HEADER PROTEIN TRANSLOCATION 11-JUN-01 1H6C TITLE OXIDIZED PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE FROM TITLE 2 ZYMOMONAS MOBILIS COMPLEXED WITH SUCCINATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.99.28; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: NADP, SUCCINATE, GLYCEROL SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZYMOMONAS MOBILIS; SOURCE 3 ORGANISM_TAXID: 542; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN TRANSLOCATION, PERIPLASMIC OXIDOREDUCTASE, SIGNAL PEPTIDE, KEYWDS 2 LIGAND BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.NURIZZO,E.N.BAKER REVDAT 3 13-DEC-23 1H6C 1 REMARK REVDAT 2 24-FEB-09 1H6C 1 VERSN REVDAT 1 28-NOV-01 1H6C 0 JRNL AUTH D.NURIZZO,D.HALBIG,G.SPRENGER,E.N.BAKER JRNL TITL CRYSTAL STRUCTURES OF THE PRECURSOR FORM OF GLUCOSE-FRUCTOSE JRNL TITL 2 OXIDOREDUCTASE FROM ZYMOMONAS MOBILIS AND ITS COMPLEXES WITH JRNL TITL 3 BOUND LIGANDS JRNL REF BIOCHEMISTRY V. 40 13857 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11705375 JRNL DOI 10.1021/BI011355D REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1999823.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 46411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1382 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7409 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE : 0.3170 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 218 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 462 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.53000 REMARK 3 B22 (A**2) : 1.28000 REMARK 3 B33 (A**2) : 11.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.140 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.730 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.830 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.440 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 52.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1H6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1290008182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : DOUBLE FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.36300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1OFG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG6000, 210MM AMMONIUM SULFATE, REMARK 280 20% GLYCEROL, 100MM K-SUCCINATE PH6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.05000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2121 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2028 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 LYS A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 ASP A 9 REMARK 465 ASN A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 ASN A 13 REMARK 465 ALA A 14 REMARK 465 VAL A 15 REMARK 465 SER A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 ASP A 19 REMARK 465 ASP A 20 REMARK 465 ASN A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 ARG A 24 REMARK 465 THR A 25 REMARK 465 PRO A 26 REMARK 465 ASN A 27 REMARK 465 LEU A 28 REMARK 465 ASN A 29 REMARK 465 ARG A 30 REMARK 465 ARG A 31 REMARK 465 ALA A 32 REMARK 465 LEU A 33 REMARK 465 VAL A 34 REMARK 465 GLY A 35 REMARK 465 GLY A 36 REMARK 465 GLY A 37 REMARK 465 VAL A 38 REMARK 465 GLY A 39 REMARK 465 LEU A 40 REMARK 465 ALA A 41 REMARK 465 ALA A 42 REMARK 465 ARG A 43 REMARK 465 GLY A 44 REMARK 465 ALA A 45 REMARK 465 LEU A 46 REMARK 465 ALA A 47 REMARK 465 SER A 48 REMARK 465 GLY A 49 REMARK 465 LEU A 50 REMARK 465 GLN A 51 REMARK 465 ALA A 52 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASN B 3 REMARK 465 LYS B 4 REMARK 465 ILE B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 ASP B 9 REMARK 465 ASN B 10 REMARK 465 LEU B 11 REMARK 465 SER B 12 REMARK 465 ASN B 13 REMARK 465 ALA B 14 REMARK 465 VAL B 15 REMARK 465 SER B 16 REMARK 465 ALA B 17 REMARK 465 THR B 18 REMARK 465 ASP B 19 REMARK 465 ASP B 20 REMARK 465 ASN B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 ARG B 24 REMARK 465 THR B 25 REMARK 465 PRO B 26 REMARK 465 ASN B 27 REMARK 465 LEU B 28 REMARK 465 ASN B 29 REMARK 465 ARG B 30 REMARK 465 ARG B 31 REMARK 465 ALA B 32 REMARK 465 LEU B 33 REMARK 465 VAL B 34 REMARK 465 GLY B 35 REMARK 465 GLY B 36 REMARK 465 GLY B 37 REMARK 465 VAL B 38 REMARK 465 GLY B 39 REMARK 465 LEU B 40 REMARK 465 ALA B 41 REMARK 465 ALA B 42 REMARK 465 ARG B 43 REMARK 465 GLY B 44 REMARK 465 ALA B 45 REMARK 465 LEU B 46 REMARK 465 ALA B 47 REMARK 465 SER B 48 REMARK 465 GLY B 49 REMARK 465 LEU B 50 REMARK 465 GLN B 51 REMARK 465 ALA B 52 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 82 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 83 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 82 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 83 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 LEU B 222 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 80 -62.73 -130.99 REMARK 500 LYS A 144 0.91 -69.23 REMARK 500 ASP A 303 -67.35 -90.85 REMARK 500 THR A 327 110.32 -20.71 REMARK 500 ASP A 343 104.49 -166.05 REMARK 500 PRO A 367 176.07 -56.23 REMARK 500 SER A 396 69.81 -119.83 REMARK 500 GLU B 80 -79.44 -111.45 REMARK 500 THR B 327 117.66 -31.00 REMARK 500 ASP B 343 105.42 -163.41 REMARK 500 PRO B 367 175.16 -58.38 REMARK 500 SER B 396 70.71 -116.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2020 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A2069 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A2126 DISTANCE = 6.85 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 700 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EVJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE (GFOR) DELTA1- REMARK 900 22 S64D REMARK 900 RELATED ID: 1OFG RELATED DB: PDB REMARK 900 GLUCOSE-FRUCTOSE OXIDOREDUCTASE REMARK 900 RELATED ID: 1H6A RELATED DB: PDB REMARK 900 REDUCED PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE FROM REMARK 900 ZYMOMONAS MOBILIS REMARK 900 RELATED ID: 1H6B RELATED DB: PDB REMARK 900 REDUCED PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE FROM REMARK 900 ZYMOMONAS MOBILIS COMPLEXED WITH GLYCEROL REMARK 900 RELATED ID: 1H6D RELATED DB: PDB REMARK 900 OXIDIZED PRECURSOR FORM OF GLUCOSE-FRUCTOSE OXIDOREDUCTASE FROM REMARK 900 ZYMOMONAS MOBILIS COMPLEXED WITH GLYCEROL REMARK 999 REMARK 999 SEQUENCE REMARK 999 MATURE FORM OF GLUCOSE FRUCTOSE OXIDOREDUCTASE DBREF 1H6C A 1 433 UNP P75002 P75002 1 433 DBREF 1H6C B 1 433 UNP P75002 P75002 1 433 SEQRES 1 A 433 MET THR ASN LYS ILE SER SER SER ASP ASN LEU SER ASN SEQRES 2 A 433 ALA VAL SER ALA THR ASP ASP ASN ALA SER ARG THR PRO SEQRES 3 A 433 ASN LEU ASN ARG ARG ALA LEU VAL GLY GLY GLY VAL GLY SEQRES 4 A 433 LEU ALA ALA ARG GLY ALA LEU ALA SER GLY LEU GLN ALA SEQRES 5 A 433 ALA THR LEU PRO ALA GLY ALA SER GLN VAL PRO THR THR SEQRES 6 A 433 PRO ALA GLY ARG PRO MET PRO TYR ALA ILE ARG PRO MET SEQRES 7 A 433 PRO GLU ASP ARG ARG PHE GLY TYR ALA ILE VAL GLY LEU SEQRES 8 A 433 GLY LYS TYR ALA LEU ASN GLN ILE LEU PRO GLY PHE ALA SEQRES 9 A 433 GLY CYS GLN HIS SER ARG ILE GLU ALA LEU VAL SER GLY SEQRES 10 A 433 ASN ALA GLU LYS ALA LYS ILE VAL ALA ALA GLU TYR GLY SEQRES 11 A 433 VAL ASP PRO ARG LYS ILE TYR ASP TYR SER ASN PHE ASP SEQRES 12 A 433 LYS ILE ALA LYS ASP PRO LYS ILE ASP ALA VAL TYR ILE SEQRES 13 A 433 ILE LEU PRO ASN SER LEU HIS ALA GLU PHE ALA ILE ARG SEQRES 14 A 433 ALA PHE LYS ALA GLY LYS HIS VAL MET CYS GLU LYS PRO SEQRES 15 A 433 MET ALA THR SER VAL ALA ASP CYS GLN ARG MET ILE ASP SEQRES 16 A 433 ALA ALA LYS ALA ALA ASN LYS LYS LEU MET ILE GLY TYR SEQRES 17 A 433 ARG CYS HIS TYR ASP PRO MET ASN ARG ALA ALA VAL LYS SEQRES 18 A 433 LEU ILE ARG GLU ASN GLN LEU GLY LYS LEU GLY MET VAL SEQRES 19 A 433 THR THR ASP ASN SER ASP VAL MET ASP GLN ASN ASP PRO SEQRES 20 A 433 ALA GLN GLN TRP ARG LEU ARG ARG GLU LEU ALA GLY GLY SEQRES 21 A 433 GLY SER LEU MET ASP ILE GLY ILE TYR GLY LEU ASN GLY SEQRES 22 A 433 THR ARG TYR LEU LEU GLY GLU GLU PRO ILE GLU VAL ARG SEQRES 23 A 433 ALA TYR THR TYR SER ASP PRO ASN ASP GLU ARG PHE VAL SEQRES 24 A 433 GLU VAL GLU ASP ARG ILE ILE TRP GLN MET ARG PHE ARG SEQRES 25 A 433 SER GLY ALA LEU SER HIS GLY ALA SER SER TYR SER THR SEQRES 26 A 433 THR THR THR SER ARG PHE SER VAL GLN GLY ASP LYS ALA SEQRES 27 A 433 VAL LEU LEU MET ASP PRO ALA THR GLY TYR TYR GLN ASN SEQRES 28 A 433 LEU ILE SER VAL GLN THR PRO GLY HIS ALA ASN GLN SER SEQRES 29 A 433 MET MET PRO GLN PHE ILE MET PRO ALA ASN ASN GLN PHE SEQRES 30 A 433 SER ALA GLN LEU ASP HIS LEU ALA GLU ALA VAL ILE ASN SEQRES 31 A 433 ASN LYS PRO VAL ARG SER PRO GLY GLU GLU GLY MET GLN SEQRES 32 A 433 ASP VAL ARG LEU ILE GLN ALA ILE TYR GLU ALA ALA ARG SEQRES 33 A 433 THR GLY ARG PRO VAL ASN THR ASP TRP GLY TYR VAL ARG SEQRES 34 A 433 GLN GLY GLY TYR SEQRES 1 B 433 MET THR ASN LYS ILE SER SER SER ASP ASN LEU SER ASN SEQRES 2 B 433 ALA VAL SER ALA THR ASP ASP ASN ALA SER ARG THR PRO SEQRES 3 B 433 ASN LEU ASN ARG ARG ALA LEU VAL GLY GLY GLY VAL GLY SEQRES 4 B 433 LEU ALA ALA ARG GLY ALA LEU ALA SER GLY LEU GLN ALA SEQRES 5 B 433 ALA THR LEU PRO ALA GLY ALA SER GLN VAL PRO THR THR SEQRES 6 B 433 PRO ALA GLY ARG PRO MET PRO TYR ALA ILE ARG PRO MET SEQRES 7 B 433 PRO GLU ASP ARG ARG PHE GLY TYR ALA ILE VAL GLY LEU SEQRES 8 B 433 GLY LYS TYR ALA LEU ASN GLN ILE LEU PRO GLY PHE ALA SEQRES 9 B 433 GLY CYS GLN HIS SER ARG ILE GLU ALA LEU VAL SER GLY SEQRES 10 B 433 ASN ALA GLU LYS ALA LYS ILE VAL ALA ALA GLU TYR GLY SEQRES 11 B 433 VAL ASP PRO ARG LYS ILE TYR ASP TYR SER ASN PHE ASP SEQRES 12 B 433 LYS ILE ALA LYS ASP PRO LYS ILE ASP ALA VAL TYR ILE SEQRES 13 B 433 ILE LEU PRO ASN SER LEU HIS ALA GLU PHE ALA ILE ARG SEQRES 14 B 433 ALA PHE LYS ALA GLY LYS HIS VAL MET CYS GLU LYS PRO SEQRES 15 B 433 MET ALA THR SER VAL ALA ASP CYS GLN ARG MET ILE ASP SEQRES 16 B 433 ALA ALA LYS ALA ALA ASN LYS LYS LEU MET ILE GLY TYR SEQRES 17 B 433 ARG CYS HIS TYR ASP PRO MET ASN ARG ALA ALA VAL LYS SEQRES 18 B 433 LEU ILE ARG GLU ASN GLN LEU GLY LYS LEU GLY MET VAL SEQRES 19 B 433 THR THR ASP ASN SER ASP VAL MET ASP GLN ASN ASP PRO SEQRES 20 B 433 ALA GLN GLN TRP ARG LEU ARG ARG GLU LEU ALA GLY GLY SEQRES 21 B 433 GLY SER LEU MET ASP ILE GLY ILE TYR GLY LEU ASN GLY SEQRES 22 B 433 THR ARG TYR LEU LEU GLY GLU GLU PRO ILE GLU VAL ARG SEQRES 23 B 433 ALA TYR THR TYR SER ASP PRO ASN ASP GLU ARG PHE VAL SEQRES 24 B 433 GLU VAL GLU ASP ARG ILE ILE TRP GLN MET ARG PHE ARG SEQRES 25 B 433 SER GLY ALA LEU SER HIS GLY ALA SER SER TYR SER THR SEQRES 26 B 433 THR THR THR SER ARG PHE SER VAL GLN GLY ASP LYS ALA SEQRES 27 B 433 VAL LEU LEU MET ASP PRO ALA THR GLY TYR TYR GLN ASN SEQRES 28 B 433 LEU ILE SER VAL GLN THR PRO GLY HIS ALA ASN GLN SER SEQRES 29 B 433 MET MET PRO GLN PHE ILE MET PRO ALA ASN ASN GLN PHE SEQRES 30 B 433 SER ALA GLN LEU ASP HIS LEU ALA GLU ALA VAL ILE ASN SEQRES 31 B 433 ASN LYS PRO VAL ARG SER PRO GLY GLU GLU GLY MET GLN SEQRES 32 B 433 ASP VAL ARG LEU ILE GLN ALA ILE TYR GLU ALA ALA ARG SEQRES 33 B 433 THR GLY ARG PRO VAL ASN THR ASP TRP GLY TYR VAL ARG SEQRES 34 B 433 GLN GLY GLY TYR HET NDP A 500 48 HET SIN A 600 8 HET GOL A 700 6 HET NDP B 500 48 HET SIN B 600 8 HET GOL B 700 6 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM SIN SUCCINIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 SIN 2(C4 H6 O4) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 9 HOH *462(H2 O) HELIX 1 1 PRO A 56 GLN A 61 1 6 HELIX 2 2 GLY A 92 GLN A 98 1 7 HELIX 3 3 GLN A 98 PHE A 103 1 6 HELIX 4 4 ASN A 118 TYR A 129 1 12 HELIX 5 5 ASP A 132 ARG A 134 5 3 HELIX 6 6 ASN A 141 ASP A 148 5 8 HELIX 7 7 PRO A 159 SER A 161 5 3 HELIX 8 8 LEU A 162 ALA A 173 1 12 HELIX 9 9 SER A 186 ASN A 201 1 16 HELIX 10 10 TYR A 208 TYR A 212 5 5 HELIX 11 11 ASP A 213 GLU A 225 1 13 HELIX 12 12 ASP A 246 TRP A 251 1 6 HELIX 13 13 ARG A 254 GLY A 259 1 6 HELIX 14 14 GLY A 261 ILE A 266 1 6 HELIX 15 15 ILE A 266 GLY A 279 1 14 HELIX 16 16 ASP A 295 VAL A 299 5 5 HELIX 17 17 ASN A 375 ASN A 390 1 16 HELIX 18 18 PRO A 397 GLY A 418 1 22 HELIX 19 19 PRO B 56 GLN B 61 1 6 HELIX 20 20 GLY B 92 GLN B 98 1 7 HELIX 21 21 ILE B 99 ALA B 104 1 6 HELIX 22 22 ASN B 118 TYR B 129 1 12 HELIX 23 23 ASP B 132 ARG B 134 5 3 HELIX 24 24 ASN B 141 ASP B 148 5 8 HELIX 25 25 PRO B 159 SER B 161 5 3 HELIX 26 26 LEU B 162 LYS B 172 1 11 HELIX 27 27 SER B 186 ALA B 200 1 15 HELIX 28 28 TYR B 208 TYR B 212 5 5 HELIX 29 29 ASP B 213 GLU B 225 1 13 HELIX 30 30 ASP B 246 TRP B 251 1 6 HELIX 31 31 ARG B 254 GLY B 259 1 6 HELIX 32 32 GLY B 261 ILE B 266 1 6 HELIX 33 33 ILE B 266 GLY B 279 1 14 HELIX 34 34 ASP B 295 VAL B 299 5 5 HELIX 35 35 ASN B 375 ASN B 390 1 16 HELIX 36 36 PRO B 397 GLY B 418 1 22 SHEET 1 AA 6 ILE A 136 TYR A 137 0 SHEET 2 AA 6 SER A 109 VAL A 115 1 O LEU A 114 N TYR A 137 SHEET 3 AA 6 PHE A 84 VAL A 89 1 O PHE A 84 N ARG A 110 SHEET 4 AA 6 ALA A 153 ILE A 156 1 O ALA A 153 N ALA A 87 SHEET 5 AA 6 HIS A 176 CYS A 179 1 O HIS A 176 N VAL A 154 SHEET 6 AA 6 LEU A 204 ILE A 206 1 O MET A 205 N CYS A 179 SHEET 1 AB 9 HIS A 360 SER A 364 0 SHEET 2 AB 9 ILE A 353 THR A 357 -1 O ILE A 353 N SER A 364 SHEET 3 AB 9 VAL A 339 MET A 342 -1 O VAL A 339 N GLN A 356 SHEET 4 AB 9 THR A 328 GLY A 335 -1 O PHE A 331 N MET A 342 SHEET 5 AB 9 LEU A 231 SER A 239 -1 N GLY A 232 O GLN A 334 SHEET 6 AB 9 LEU A 316 SER A 322 1 O LEU A 316 N VAL A 234 SHEET 7 AB 9 ARG A 304 PHE A 311 -1 O ILE A 305 N SER A 321 SHEET 8 AB 9 PRO A 282 TYR A 290 -1 N ILE A 283 O ARG A 310 SHEET 9 AB 9 VAL A 421 ASN A 422 -1 O VAL A 421 N VAL A 285 SHEET 1 BA 6 ILE B 136 TYR B 137 0 SHEET 2 BA 6 SER B 109 VAL B 115 1 O LEU B 114 N TYR B 137 SHEET 3 BA 6 PHE B 84 VAL B 89 1 O PHE B 84 N ARG B 110 SHEET 4 BA 6 ALA B 153 ILE B 156 1 O ALA B 153 N ALA B 87 SHEET 5 BA 6 HIS B 176 CYS B 179 1 O HIS B 176 N VAL B 154 SHEET 6 BA 6 LEU B 204 ILE B 206 1 O MET B 205 N CYS B 179 SHEET 1 BB 9 HIS B 360 SER B 364 0 SHEET 2 BB 9 ILE B 353 THR B 357 -1 O ILE B 353 N SER B 364 SHEET 3 BB 9 VAL B 339 MET B 342 -1 O VAL B 339 N GLN B 356 SHEET 4 BB 9 THR B 328 GLN B 334 -1 O PHE B 331 N MET B 342 SHEET 5 BB 9 MET B 233 SER B 239 -1 O MET B 233 N GLN B 334 SHEET 6 BB 9 LEU B 316 SER B 322 1 O LEU B 316 N VAL B 234 SHEET 7 BB 9 ARG B 304 PHE B 311 -1 O ILE B 305 N SER B 321 SHEET 8 BB 9 PRO B 282 TYR B 290 -1 N ILE B 283 O ARG B 310 SHEET 9 BB 9 VAL B 421 ASN B 422 -1 O VAL B 421 N VAL B 285 CISPEP 1 LYS A 181 PRO A 182 0 -0.79 CISPEP 2 ASP A 343 PRO A 344 0 -0.32 CISPEP 3 LYS B 181 PRO B 182 0 -0.48 CISPEP 4 ASP B 343 PRO B 344 0 0.01 SITE 1 AC1 37 VAL A 62 PRO A 63 THR A 65 PRO A 66 SITE 2 AC1 37 ALA A 67 GLY A 68 ARG A 69 GLY A 90 SITE 3 AC1 37 LEU A 91 GLY A 92 LYS A 93 TYR A 94 SITE 4 AC1 37 SER A 116 GLY A 117 LYS A 121 TYR A 139 SITE 5 AC1 37 ILE A 157 LEU A 158 PRO A 159 ASN A 160 SITE 6 AC1 37 HIS A 163 GLU A 180 LYS A 181 ARG A 209 SITE 7 AC1 37 ALA A 248 TRP A 251 ARG A 252 TYR A 269 SITE 8 AC1 37 TYR A 348 SIN A 600 HOH A2014 HOH A2147 SITE 9 AC1 37 HOH A2191 HOH A2318 HOH A2319 HOH A2320 SITE 10 AC1 37 HOH A2324 SITE 1 AC2 10 LYS A 181 ILE A 266 TYR A 269 PHE A 369 SITE 2 AC2 10 NDP A 500 HOH A2240 HOH A2321 HOH A2322 SITE 3 AC2 10 HOH A2323 HOH A2324 SITE 1 AC3 34 VAL B 62 PRO B 63 THR B 65 PRO B 66 SITE 2 AC3 34 ALA B 67 GLY B 68 ARG B 69 GLY B 90 SITE 3 AC3 34 LEU B 91 GLY B 92 LYS B 93 TYR B 94 SITE 4 AC3 34 SER B 116 GLY B 117 ASN B 118 LYS B 121 SITE 5 AC3 34 TYR B 139 ILE B 157 LEU B 158 PRO B 159 SITE 6 AC3 34 ASN B 160 LEU B 162 HIS B 163 GLU B 180 SITE 7 AC3 34 LYS B 181 ARG B 209 ALA B 248 TRP B 251 SITE 8 AC3 34 ARG B 252 TYR B 269 TYR B 348 SIN B 600 SITE 9 AC3 34 HOH B2067 HOH B2135 SITE 1 AC4 8 LYS B 181 TYR B 269 TYR B 348 PHE B 369 SITE 2 AC4 8 NDP B 500 GOL B 700 HOH B2055 HOH B2067 SITE 1 AC5 4 TYR A 348 HOH A2176 HOH A2325 HOH A2326 SITE 1 AC6 7 ILE B 75 LYS B 93 ASP B 240 PHE B 369 SITE 2 AC6 7 SIN B 600 HOH B2056 HOH B2136 CRYST1 84.100 93.300 115.400 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011891 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008665 0.00000