HEADER HYDROLASE 19-JUN-01 1H6L TITLE BETA-PROPELLER PHYTASE IN COMPLEX WITH PHOSPHATE AND CALCIUM IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-PHYTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHYTASE, PHYTATE 3-PHOSPHATASE, MYO-INOSITOL-HEXAPHOSPHATE COMPND 5 3-PHOSPHOHYDROLASE; COMPND 6 EC: 3.1.3.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS AMYLOLIQUEFACIENS; SOURCE 3 ORGANISM_TAXID: 1390; SOURCE 4 STRAIN: DS11 KEYWDS HYDROLASE, PHOSPHATASE, PHYTASE, PROPELLER, PHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR S.SHIN,N.C.HA,B.H.OH REVDAT 4 13-DEC-23 1H6L 1 REMARK LINK REVDAT 3 24-FEB-09 1H6L 1 VERSN REVDAT 2 11-OCT-01 1H6L 1 JRNL LINK REVDAT 1 29-AUG-01 1H6L 0 JRNL AUTH S.SHIN,N.C.HA,B.H.OH,T.OH,B.H.OH JRNL TITL ENZYME MECHANISM AND CATALYTIC PROPERTY OF BETA PROPELLER JRNL TITL 2 PHYTASE JRNL REF STRUCTURE V. 9 851 2001 JRNL REFN ISSN 0969-2126 JRNL PMID 11566134 JRNL DOI 10.1016/S0969-2126(01)00637-2 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 32362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2736 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.530 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1H6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1290008195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 297.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32362 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 7.730 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.27100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2POO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.18900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.38350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.82200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.38350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.18900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.82200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2050 O HOH A 2051 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 331 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 53 -58.41 -131.25 REMARK 500 ASP A 55 -59.14 -133.55 REMARK 500 SER A 78 -158.76 -146.62 REMARK 500 GLU A 124 104.50 -49.14 REMARK 500 LYS A 126 -77.57 -99.06 REMARK 500 TYR A 159 -84.76 -139.06 REMARK 500 GLU A 211 -65.39 -148.12 REMARK 500 GLU A 227 -53.69 -29.65 REMARK 500 GLU A 229 -67.99 -122.58 REMARK 500 GLU A 260 -121.24 -106.05 REMARK 500 ASP A 314 -87.51 -100.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 43 OE2 REMARK 620 2 GLU A 43 OE1 47.4 REMARK 620 3 ASP A 308 OD2 82.9 103.3 REMARK 620 4 ASN A 339 OD1 80.1 123.5 86.1 REMARK 620 5 ILE A 340 O 165.7 144.0 85.0 91.6 REMARK 620 6 ASP A 341 OD1 103.6 82.2 173.4 93.9 88.4 REMARK 620 7 HOH A2004 O 109.2 71.3 80.1 162.1 75.9 98.5 REMARK 620 8 HOH A2131 O 56.3 72.1 129.3 60.4 128.9 55.7 137.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD2 REMARK 620 2 ASP A 52 OD1 47.8 REMARK 620 3 ASP A 314 OD1 166.9 145.0 REMARK 620 4 PO4 A 501 O3 76.9 123.1 90.0 REMARK 620 5 PO4 A 501 O4 105.1 145.7 64.5 47.7 REMARK 620 6 HOH A2012 O 92.7 88.9 85.5 80.5 116.6 REMARK 620 7 HOH A2113 O 123.2 79.6 69.5 156.5 110.5 108.2 REMARK 620 8 HOH A2144 O 87.0 99.5 92.1 88.1 52.5 168.3 81.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 55 OD2 REMARK 620 2 ASP A 55 OD1 48.0 REMARK 620 3 GLU A 211 OE1 122.5 170.3 REMARK 620 4 GLU A 211 OE2 76.4 123.9 47.2 REMARK 620 5 PO4 A 501 O1 153.3 106.6 83.1 126.4 REMARK 620 6 HOH A2026 O 81.5 81.6 99.9 83.9 87.2 REMARK 620 7 HOH A2087 O 85.8 99.7 75.9 80.3 109.7 161.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASP A 56 OD2 47.5 REMARK 620 3 PRO A 57 O 80.8 90.1 REMARK 620 4 VAL A 101 O 121.4 74.2 95.7 REMARK 620 5 HOH A2055 O 103.3 90.3 174.7 79.3 REMARK 620 6 HOH A2116 O 78.4 123.9 95.2 158.7 88.9 REMARK 620 7 HOH A2117 O 155.1 154.0 85.9 80.7 91.4 82.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 159 OH REMARK 620 2 GLU A 211 OE1 79.2 REMARK 620 3 GLU A 227 OE2 89.8 96.0 REMARK 620 4 GLU A 260 OE1 156.3 123.9 92.5 REMARK 620 5 GLU A 260 OE2 155.4 76.5 96.5 47.4 REMARK 620 6 PO4 A 501 O1 81.3 86.4 170.2 94.0 93.3 REMARK 620 7 HOH A2078 O 78.7 157.7 81.5 78.3 125.7 92.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 258 OD2 REMARK 620 2 GLU A 260 OE1 94.8 REMARK 620 3 GLN A 279 OE1 90.2 80.4 REMARK 620 4 PO4 A 501 O4 177.9 87.1 89.1 REMARK 620 5 HOH A2078 O 81.8 77.4 155.6 99.6 REMARK 620 6 HOH A2098 O 101.1 146.5 70.2 76.8 133.8 REMARK 620 7 HOH A2143 O 83.9 146.4 133.1 95.0 69.1 65.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 308 OD1 REMARK 620 2 GLY A 309 O 88.0 REMARK 620 3 ASN A 336 OD1 81.3 79.3 REMARK 620 4 ASN A 336 ND2 125.1 84.8 43.9 REMARK 620 5 GLU A 338 O 98.1 160.3 83.1 76.4 REMARK 620 6 HOH A2111 O 81.1 104.7 161.8 152.9 94.8 REMARK 620 7 HOH A2112 O 152.1 92.3 126.1 82.6 91.0 71.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 502 DBREF 1H6L A 29 381 UNP O66037 PHYT_BACSD 29 381 SEQRES 1 A 353 LYS LEU SER ASP PRO TYR HIS PHE THR VAL ASN ALA ALA SEQRES 2 A 353 ALA GLU THR GLU PRO VAL ASP THR ALA GLY ASP ALA ALA SEQRES 3 A 353 ASP ASP PRO ALA ILE TRP LEU ASP PRO LYS ASN PRO GLN SEQRES 4 A 353 ASN SER LYS LEU ILE THR THR ASN LYS LYS SER GLY LEU SEQRES 5 A 353 ALA VAL TYR SER LEU GLU GLY LYS MET LEU HIS SER TYR SEQRES 6 A 353 HIS THR GLY LYS LEU ASN ASN VAL ASP ILE ARG TYR ASP SEQRES 7 A 353 PHE PRO LEU ASN GLY LYS LYS VAL ASP ILE ALA ALA ALA SEQRES 8 A 353 SER ASN ARG SER GLU GLY LYS ASN THR ILE GLU ILE TYR SEQRES 9 A 353 ALA ILE ASP GLY LYS ASN GLY THR LEU GLN SER ILE THR SEQRES 10 A 353 ASP PRO ASN ARG PRO ILE ALA SER ALA ILE ASP GLU VAL SEQRES 11 A 353 TYR GLY PHE SER LEU TYR HIS SER GLN LYS THR GLY LYS SEQRES 12 A 353 TYR TYR ALA MET VAL THR GLY LYS GLU GLY GLU PHE GLU SEQRES 13 A 353 GLN TYR GLU LEU ASN ALA ASP LYS ASN GLY TYR ILE SER SEQRES 14 A 353 GLY LYS LYS VAL ARG ALA PHE LYS MET ASN SER GLN THR SEQRES 15 A 353 GLU GLY MET ALA ALA ASP ASP GLU TYR GLY SER LEU TYR SEQRES 16 A 353 ILE ALA GLU GLU ASP GLU ALA ILE TRP LYS PHE SER ALA SEQRES 17 A 353 GLU PRO ASP GLY GLY SER ASN GLY THR VAL ILE ASP ARG SEQRES 18 A 353 ALA ASP GLY ARG HIS LEU THR PRO ASP ILE GLU GLY LEU SEQRES 19 A 353 THR ILE TYR TYR ALA ALA ASP GLY LYS GLY TYR LEU LEU SEQRES 20 A 353 ALA SER SER GLN GLY ASN SER SER TYR ALA ILE TYR GLU SEQRES 21 A 353 ARG GLN GLY GLN ASN LYS TYR VAL ALA ASP PHE GLN ILE SEQRES 22 A 353 THR ASP GLY PRO GLU THR ASP GLY THR SER ASP THR ASP SEQRES 23 A 353 GLY ILE ASP VAL LEU GLY PHE GLY LEU GLY PRO GLU TYR SEQRES 24 A 353 PRO PHE GLY LEU PHE VAL ALA GLN ASN GLY GLU ASN ILE SEQRES 25 A 353 ASP HIS GLY GLN LYS ALA ASN GLN ASN PHE LYS MET VAL SEQRES 26 A 353 PRO TRP GLU ARG ILE ALA ASP LYS ILE GLY PHE HIS PRO SEQRES 27 A 353 GLN VAL ASN LYS GLN VAL ASP PRO ARG LYS MET THR ASP SEQRES 28 A 353 ARG SER HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET CA A 407 1 HET PO4 A 501 5 HET PO4 A 502 5 HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 2 CA 7(CA 2+) FORMUL 9 PO4 2(O4 P 3-) FORMUL 11 HOH *145(H2 O) HELIX 1 1 ASN A 65 ASN A 68 5 4 HELIX 2 2 ALA A 268 GLY A 270 5 3 HELIX 3 3 GLY A 280 SER A 282 5 3 HELIX 4 4 TRP A 355 ASP A 360 1 6 HELIX 5 5 LYS A 361 GLY A 363 5 3 SHEET 1 AA 5 HIS A 35 VAL A 38 0 SHEET 2 AA 5 TYR A 295 ILE A 301 1 O ASP A 298 N PHE A 36 SHEET 3 AA 5 SER A 283 GLU A 288 -1 O TYR A 284 N PHE A 299 SHEET 4 AA 5 GLY A 272 SER A 278 -1 O LEU A 274 N TYR A 287 SHEET 5 AA 5 ILE A 259 TYR A 266 -1 N GLU A 260 O SER A 277 SHEET 1 AB 4 ALA A 42 GLU A 43 0 SHEET 2 AB 4 ASN A 349 PRO A 354 -1 N MET A 352 O ALA A 42 SHEET 3 AB 4 LEU A 331 ASN A 336 -1 O PHE A 332 N VAL A 353 SHEET 4 AB 4 ILE A 316 LEU A 319 -1 O ASP A 317 N VAL A 333 SHEET 1 AC 4 ALA A 54 TRP A 60 0 SHEET 2 AC 4 LYS A 70 ASN A 75 -1 O LYS A 70 N TRP A 60 SHEET 3 AC 4 ALA A 81 SER A 84 -1 O ALA A 81 N THR A 73 SHEET 4 AC 4 MET A 89 SER A 92 -1 N LEU A 90 O VAL A 82 SHEET 1 AD 4 LEU A 98 LEU A 109 0 SHEET 2 AD 4 LYS A 112 ASN A 121 -1 O LYS A 112 N LEU A 109 SHEET 3 AD 4 THR A 128 ASP A 135 -1 O THR A 128 N ASN A 121 SHEET 4 AD 4 ILE A 151 ALA A 152 -1 O ILE A 151 N ILE A 129 SHEET 1 AE 4 LEU A 98 LEU A 109 0 SHEET 2 AE 4 LYS A 112 ASN A 121 -1 O LYS A 112 N LEU A 109 SHEET 3 AE 4 THR A 128 ASP A 135 -1 O THR A 128 N ASN A 121 SHEET 4 AE 4 THR A 140 SER A 143 -1 O THR A 140 N ASP A 135 SHEET 1 AF 4 PHE A 161 HIS A 165 0 SHEET 2 AF 4 TYR A 172 THR A 177 -1 O TYR A 173 N TYR A 164 SHEET 3 AF 4 GLU A 182 ALA A 190 -1 O GLU A 184 N VAL A 176 SHEET 4 AF 4 ILE A 196 LYS A 205 -1 O SER A 197 N ASN A 189 SHEET 1 AG 4 THR A 210 ASP A 216 0 SHEET 2 AG 4 SER A 221 GLU A 226 -1 O SER A 221 N ASP A 216 SHEET 3 AG 4 ALA A 230 SER A 235 -1 O ALA A 230 N GLU A 226 SHEET 4 AG 4 THR A 245 ARG A 249 -1 O THR A 245 N LYS A 233 SHEET 1 AH 2 ILE A 340 ASP A 341 0 SHEET 2 AH 2 GLN A 344 LYS A 345 -1 O GLN A 344 N ASP A 341 LINK OE2 GLU A 43 CA CA A 401 1555 1555 2.66 LINK OE1 GLU A 43 CA CA A 401 1555 1555 2.82 LINK OD2 ASP A 52 CA CA A 407 1555 1555 2.79 LINK OD1 ASP A 52 CA CA A 407 1555 1555 2.64 LINK OD2 ASP A 55 CA CA A 404 1555 1555 2.74 LINK OD1 ASP A 55 CA CA A 404 1555 1555 2.67 LINK OD1 ASP A 56 CA CA A 403 1555 1555 2.82 LINK OD2 ASP A 56 CA CA A 403 1555 1555 2.63 LINK O PRO A 57 CA CA A 403 1555 1555 2.52 LINK O VAL A 101 CA CA A 403 1555 1555 2.48 LINK OH TYR A 159 CA CA A 405 1555 1555 2.64 LINK OE1 GLU A 211 CA CA A 404 1555 1555 2.68 LINK OE2 GLU A 211 CA CA A 404 1555 1555 2.75 LINK OE1 GLU A 211 CA CA A 405 1555 1555 2.60 LINK OE2 GLU A 227 CA CA A 405 1555 1555 2.76 LINK OD2 ASP A 258 CA CA A 406 1555 1555 2.65 LINK OE1 GLU A 260 CA CA A 405 1555 1555 2.73 LINK OE2 GLU A 260 CA CA A 405 1555 1555 2.71 LINK OE1 GLU A 260 CA CA A 406 1555 1555 2.66 LINK OE1 GLN A 279 CA CA A 406 1555 1555 2.55 LINK OD2 ASP A 308 CA CA A 401 1555 1555 2.58 LINK OD1 ASP A 308 CA CA A 402 1555 1555 2.66 LINK O GLY A 309 CA CA A 402 1555 1555 2.53 LINK OD1 ASP A 314 CA CA A 407 1555 1555 2.50 LINK OD1 ASN A 336 CA CA A 402 1555 1555 2.64 LINK ND2 ASN A 336 CA CA A 402 1555 1555 3.20 LINK O GLU A 338 CA CA A 402 1555 1555 2.53 LINK OD1 ASN A 339 CA CA A 401 1555 1555 2.62 LINK O ILE A 340 CA CA A 401 1555 1555 2.64 LINK OD1 ASP A 341 CA CA A 401 1555 1555 2.66 LINK CA CA A 401 O HOH A2004 1555 1555 2.71 LINK CA CA A 401 O HOH A2131 1555 1555 3.22 LINK CA CA A 402 O HOH A2111 1555 1555 2.87 LINK CA CA A 402 O HOH A2112 1555 1555 2.66 LINK CA CA A 403 O HOH A2055 1555 1555 2.59 LINK CA CA A 403 O HOH A2116 1555 1555 2.54 LINK CA CA A 403 O HOH A2117 1555 1555 2.54 LINK CA CA A 404 O1 PO4 A 501 1555 1555 2.51 LINK CA CA A 404 O HOH A2026 1555 1555 2.67 LINK CA CA A 404 O HOH A2087 1555 1555 2.63 LINK CA CA A 405 O1 PO4 A 501 1555 1555 2.45 LINK CA CA A 405 O HOH A2078 1555 1555 2.55 LINK CA CA A 406 O4 PO4 A 501 1555 1555 2.60 LINK CA CA A 406 O HOH A2078 1555 1555 2.68 LINK CA CA A 406 O HOH A2098 1555 1555 2.90 LINK CA CA A 406 O HOH A2143 1555 1555 2.50 LINK CA CA A 407 O3 PO4 A 501 1555 1555 2.56 LINK CA CA A 407 O4 PO4 A 501 1555 1555 3.38 LINK CA CA A 407 O HOH A2012 1555 1555 2.61 LINK CA CA A 407 O HOH A2113 1555 1555 2.66 LINK CA CA A 407 O HOH A2144 1555 1555 2.54 CISPEP 1 ASP A 32 PRO A 33 0 -0.03 CISPEP 2 PRO A 257 ASP A 258 0 0.30 SITE 1 AC1 6 GLU A 43 ASP A 308 ASN A 339 ILE A 340 SITE 2 AC1 6 ASP A 341 HOH A2004 SITE 1 AC2 6 ASP A 308 GLY A 309 ASN A 336 GLU A 338 SITE 2 AC2 6 HOH A2111 HOH A2112 SITE 1 AC3 6 ASP A 56 PRO A 57 VAL A 101 HOH A2055 SITE 2 AC3 6 HOH A2116 HOH A2117 SITE 1 AC4 6 ASP A 55 GLU A 211 ASP A 314 PO4 A 501 SITE 2 AC4 6 HOH A2026 HOH A2087 SITE 1 AC5 6 TYR A 159 GLU A 211 GLU A 227 GLU A 260 SITE 2 AC5 6 PO4 A 501 HOH A2078 SITE 1 AC6 7 ASP A 258 GLU A 260 GLN A 279 PO4 A 501 SITE 2 AC6 7 HOH A2078 HOH A2098 HOH A2143 SITE 1 AC7 6 ASP A 52 ASP A 314 PO4 A 501 HOH A2012 SITE 2 AC7 6 HOH A2113 HOH A2144 SITE 1 AC8 15 ASP A 52 ASP A 55 LYS A 76 TYR A 159 SITE 2 AC8 15 GLU A 211 GLU A 260 GLN A 279 ASP A 314 SITE 3 AC8 15 CA A 404 CA A 405 CA A 406 CA A 407 SITE 4 AC8 15 PO4 A 502 HOH A2143 HOH A2144 SITE 1 AC9 7 LYS A 76 ARG A 122 TYR A 159 LYS A 179 SITE 2 AC9 7 PO4 A 501 HOH A2026 HOH A2145 CRYST1 50.378 65.644 104.767 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019850 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015234 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009545 0.00000