HEADER TRANSFERASE 29-JUN-01 1H6Z OBSLTE 29-DEC-09 1H6Z 2X0S TITLE 3.0 A RESOLUTION CRYSTAL STRUCTURE OF GLYCOSOMAL PYRUVATE TITLE 2 PHOSPHATE DIKINASE FROM TRYPANOSOMA BRUCEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE PHOSPHATE DIKINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.9.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 STRAIN: ANTAT1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 9 OTHER_DETAILS: GLYCOSOME KEYWDS TRANSFERASE, KINASE, TROPICAL PARASITE, TRYPANOSOME EXPDTA X-RAY DIFFRACTION AUTHOR L.W.COSENZA,F.BRINGAUD,T.BALTZ,F.M.D.VELLIEUX REVDAT 3 29-DEC-09 1H6Z 1 OBSLTE REVDAT 2 24-FEB-09 1H6Z 1 VERSN REVDAT 1 05-JUN-02 1H6Z 0 JRNL AUTH L.W.COSENZA,F.BRINGAUD,T.BALTZ,F.M.D.VELLIEUX JRNL TITL THE 3.0 A RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 GLYCOSOMAL PYRUVATE PHOSPHATE DIKINASE FROM JRNL TITL 3 TRYPANOSOMA BRUCEI JRNL REF J.MOL.BIOL. V. 318 1417 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 12083528 JRNL DOI 10.1016/S0022-2836(02)00113-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.W.COSENZA,F.BRINGAUD,T.BALTZ,F.M.D.VELLIEUX REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 2 INVESTIGATION OF GLYCOSOMAL PYRUVATE PHOSPHATE REMARK 1 TITL 3 DIKINASE FROM TRYPANOSOMA BRUCEI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. D56 1688 2000 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 11092947 REMARK 1 DOI 10.1107/S0907444900015298 REMARK 1 REFERENCE 2 REMARK 1 AUTH F.BRINGAUD,D.BALTZ,T.BALTZ REMARK 1 TITL FUNCTIONAL AND MOLECULAR CHARACTERIZATION OF A REMARK 1 TITL 2 GLYCOSOMAL PPI-DEPENDENT ENZYME IN REMARK 1 TITL 3 TRYPANOSOMATIDS: PYRUVATE, PHOSPHATE DIKINASE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 95 7963 1998 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9653123 REMARK 1 DOI 10.1073/PNAS.95.14.7963 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 24107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.6 REMARK 3 FREE R VALUE TEST SET COUNT : 1161 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.0086 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 23 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.04 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 857 REMARK 3 BIN R VALUE (WORKING SET) : 0.3867 REMARK 3 BIN FREE R VALUE : 0.4222 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 51 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.0607 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6927 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 177 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.527 REMARK 3 B22 (A**2) : 3.662 REMARK 3 B33 (A**2) : 5.865 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.72 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.94 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 2.0 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.3 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.16 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.33 ; 1.50 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.65 ; 2.00 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.38 ; 2.00 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.72 ; 2.50 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.24 REMARK 3 BSOL : 10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MOLECULAR REPLACEMENT. FIRST STEP. REMARK 3 POSITIONING THE C-TERMINAL DOMAIN OF THE MODEL (TIM-BARREL). REMARK 3 SECOND STEP. POSITIONING THE C-TERMINAL FRAGMENT OF THE N- REMARK 3 TERMINAL DOMAIN, THIRD STEP. POSITIONING THE N-TERMINAL REMARK 3 FRAGMENT OF THE N-TERMINAL DOMAIN. FOURTH STEP. POSITIONING REMARK 3 THE CENTRAL DOMAIN BY REAL SPACE MOLECULAR REPLACEMENT. REMARK 3 DISORDERED REGIONS ARE LEFT IN THE MODEL (EXCEPT FOR RESIDUES REMARK 3 0, 102 - 107 AND 904-918 WHICH HAVE NOT BEEN MODELLED). THE REMARK 3 CORRESPONDING ELECTRON DENSITY IS OF VERY POOR QUALITY REMARK 3 (DISCONTINUOUS), AND THE ATOMS IN THESE SEGMENTS OF THE MODEL REMARK 3 HAVE VERY HIGH ISOTROPIC TEMPERATURE FACTORS. RESIDUE REMARK 3 NUMBERING FOLLOWS THE AMINO ACID SEQUENCE LINEARLY. THE REMARK 3 INITIATOR METHIONINE (NOT SEEN IN THE ELECTRON DENSITY AND REMARK 3 THEREFORE NOT PRESENT IN THE MODEL) IS GIVEN SEQUENCE NUMBER 0. REMARK 4 REMARK 4 1H6Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-01. REMARK 100 THE PDBE ID CODE IS EBI-8242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 277.0 REMARK 200 PH : 8.80 REMARK 200 NUMBER OF CRYSTALS USED : 5 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.964 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : BIOMOL (SCALKB2, KBAPLY), REMARK 200 CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24120 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 24.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.08760 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1DIK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HANGING DROP, 2 MICROLITER PROTEIN REMARK 280 AND 2 MICROLITER PRECIPITANT SOLUTION. REMARK 280 PROTEIN SOLUTION. 50 MG/ML, 20 MM IMIDAZOLE PH 7.0, REMARK 280 100 MM NACL, 100 MM MGCL2, 20% (V/V) GLYCEROL. REMARK 280 PRECIPITANT SOLUTION. 0.1 M BICINE PH 8.8, 1.5 % (W/V) REMARK 280 PEG 5000 MONOMETHYLETHER, 10 % (V/V) GLYCEROL. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 60.58500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 76.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.58500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 76.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET A 103 REMARK 465 PRO A 104 REMARK 465 GLY A 105 REMARK 465 MET A 106 REMARK 465 MET A 107 REMARK 465 ALA A 904 REMARK 465 ARG A 905 REMARK 465 LYS A 906 REMARK 465 GLY A 907 REMARK 465 PHE A 908 REMARK 465 ALA A 909 REMARK 465 ALA A 910 REMARK 465 LYS A 911 REMARK 465 LEU A 912 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 283 N - CA - C ANGL. DEV. = -17.2 DEGREES REMARK 500 HIS A 307 N - CA - C ANGL. DEV. = -21.1 DEGREES REMARK 500 ARG A 538 N - CA - C ANGL. DEV. = -25.6 DEGREES REMARK 500 PRO A 540 N - CA - C ANGL. DEV. = -21.6 DEGREES REMARK 500 PRO A 540 N - CA - CB ANGL. DEV. = -21.6 DEGREES REMARK 500 PRO A 540 N - CD - CG ANGL. DEV. = -21.6 DEGREES REMARK 500 ASP A 541 N - CA - C ANGL. DEV. = 22.8 DEGREES REMARK 500 LEU A 542 CA - CB - CG ANGL. DEV. = -14.8 DEGREES REMARK 500 LEU A 542 CB - CA - C ANGL. DEV. = 11.6 DEGREES REMARK 500 ALA A 663 N - CA - C ANGL. DEV. = 32.7 DEGREES REMARK 500 ARG A 759 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 GLY A 817 N - CA - C ANGL. DEV. = 15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 2 -10.90 -148.38 REMARK 500 ALA A 14 110.00 56.88 REMARK 500 LYS A 18 -14.47 -44.64 REMARK 500 PRO A 40 76.66 -62.52 REMARK 500 THR A 48 157.01 -48.96 REMARK 500 GLN A 56 -9.56 -45.44 REMARK 500 THR A 58 112.48 -171.11 REMARK 500 PRO A 62 154.44 -46.97 REMARK 500 SER A 94 86.20 -156.50 REMARK 500 ALA A 99 87.67 -174.21 REMARK 500 ASP A 121 49.64 -80.40 REMARK 500 ALA A 122 -38.84 -145.39 REMARK 500 ARG A 126 -18.43 -166.58 REMARK 500 ALA A 127 76.37 -168.58 REMARK 500 PHE A 133 -54.98 -120.14 REMARK 500 ASP A 147 -77.23 -59.62 REMARK 500 GLN A 151 70.39 58.13 REMARK 500 ARG A 154 -31.26 164.47 REMARK 500 LEU A 161 -61.21 -95.67 REMARK 500 LEU A 194 -40.56 -143.10 REMARK 500 ASN A 221 102.36 -32.49 REMARK 500 PRO A 222 3.31 -58.40 REMARK 500 ASN A 232 67.60 11.54 REMARK 500 ARG A 263 135.56 -171.10 REMARK 500 SER A 266 -59.75 -121.30 REMARK 500 PHE A 272 85.09 -62.71 REMARK 500 ASN A 279 82.00 41.12 REMARK 500 GLU A 283 -35.08 157.43 REMARK 500 ARG A 290 81.25 52.49 REMARK 500 THR A 291 114.34 -12.18 REMARK 500 LYS A 305 3.25 -65.18 REMARK 500 ALA A 306 43.69 -142.70 REMARK 500 TYR A 318 69.01 -116.28 REMARK 500 PRO A 319 -148.88 -55.00 REMARK 500 MET A 404 30.03 -94.71 REMARK 500 LEU A 408 -166.36 -69.05 REMARK 500 ALA A 415 -138.93 -174.07 REMARK 500 ASN A 416 -151.15 -145.41 REMARK 500 LYS A 417 13.35 143.51 REMARK 500 PRO A 418 88.01 -64.71 REMARK 500 ASP A 500 28.60 -78.14 REMARK 500 SER A 526 -15.27 76.25 REMARK 500 LEU A 529 -145.97 -124.52 REMARK 500 TYR A 531 -112.89 25.79 REMARK 500 LYS A 536 -156.33 -158.27 REMARK 500 ARG A 538 58.82 -115.13 REMARK 500 LEU A 542 61.97 34.02 REMARK 500 SER A 576 38.29 -74.66 REMARK 500 PHE A 592 -99.92 -108.02 REMARK 500 ARG A 596 -40.50 -27.93 REMARK 500 ASP A 607 54.18 -93.99 REMARK 500 SER A 608 152.70 164.25 REMARK 500 MET A 634 65.06 -114.72 REMARK 500 LEU A 644 122.04 -39.30 REMARK 500 ASP A 645 -63.43 -98.18 REMARK 500 ASP A 655 -20.69 167.97 REMARK 500 ALA A 656 129.31 -12.31 REMARK 500 ALA A 658 -79.14 -133.35 REMARK 500 ALA A 663 179.52 76.28 REMARK 500 GLN A 664 125.21 156.00 REMARK 500 LYS A 665 -142.23 25.13 REMARK 500 PRO A 669 -136.47 -128.18 REMARK 500 LEU A 731 6.38 44.97 REMARK 500 THR A 791 -16.38 -47.53 REMARK 500 PRO A 808 16.17 -69.83 REMARK 500 PHE A 809 -27.85 -153.16 REMARK 500 ASP A 822 107.80 -57.09 REMARK 500 VAL A 846 -72.16 -88.70 REMARK 500 PHE A 881 3.96 -66.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 762 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 PRO A 410 45.1 L L OUTSIDE RANGE REMARK 500 GLU A 443 24.7 L L OUTSIDE RANGE REMARK 500 LYS A 449 24.9 L L OUTSIDE RANGE REMARK 500 TYR A 531 23.3 L L OUTSIDE RANGE REMARK 500 ARG A 538 46.0 L L OUTSIDE RANGE REMARK 500 PRO A 540 51.2 L L OUTSIDE RANGE REMARK 500 ASP A 541 16.5 L L OUTSIDE RANGE REMARK 500 ALA A 663 15.9 L L OUTSIDE RANGE REMARK 500 ARG A 759 24.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): DBREF 1H6Z A 0 912 UNP O76283 O76283 0 912 SEQRES 1 A 913 MET VAL ALA LYS LYS TRP VAL TYR TYR PHE GLY GLY GLY SEQRES 2 A 913 ASN ALA ASP GLY ASN LYS ASN MET LYS GLU LEU LEU GLY SEQRES 3 A 913 GLY LYS GLY ALA ASN LEU ALA GLU MET VAL ASN LEU GLY SEQRES 4 A 913 ILE PRO VAL PRO PRO GLY PHE THR ILE THR THR GLU ALA SEQRES 5 A 913 CYS LYS THR TYR GLN GLU THR GLU THR ILE PRO GLN GLU SEQRES 6 A 913 VAL ALA ASP GLN VAL ARG GLU ASN VAL SER ARG VAL GLU SEQRES 7 A 913 LYS GLU MET GLY ALA LYS PHE GLY ASP PRO ALA ASN PRO SEQRES 8 A 913 LEU LEU PHE SER VAL ARG SER GLY ALA ALA ALA SER MET SEQRES 9 A 913 PRO GLY MET MET ASP THR VAL LEU ASN LEU GLY LEU ASN SEQRES 10 A 913 LYS VAL THR VAL ASP ALA TRP VAL ARG ARG ALA PRO ARG SEQRES 11 A 913 LEU GLU ARG PHE VAL TYR ASP SER TYR ARG ARG PHE ILE SEQRES 12 A 913 THR MET TYR ALA ASP ILE VAL MET GLN VAL GLY ARG GLU SEQRES 13 A 913 ASP PHE GLU GLU ALA LEU SER ARG MET LYS GLU ARG ARG SEQRES 14 A 913 GLY THR LYS PHE ASP THR ASP LEU THR ALA SER ASP LEU SEQRES 15 A 913 LYS GLU LEU CYS ASP GLY TYR LEU GLU LEU PHE GLU LEU SEQRES 16 A 913 LYS THR GLY CYS SER PHE PRO GLN ASP PRO VAL MET GLN SEQRES 17 A 913 LEU PHE ALA ALA ILE LYS ALA VAL PHE ARG SER TRP GLY SEQRES 18 A 913 ASN PRO ARG ALA THR ILE TYR ARG ARG MET ASN ASN ILE SEQRES 19 A 913 THR GLY LEU LEU GLY THR ALA VAL ASN VAL GLN ALA MET SEQRES 20 A 913 VAL PHE GLY ASN ILE ASN ASP ARG SER ALA THR GLY VAL SEQRES 21 A 913 ALA PHE SER ARG SER PRO SER THR GLY GLU ASN PHE PHE SEQRES 22 A 913 PHE GLY GLU TYR LEU VAL ASN ALA GLN GLY GLU ASP VAL SEQRES 23 A 913 VAL ALA GLY ILE ARG THR PRO GLN GLN ILE ASN HIS SER SEQRES 24 A 913 LEU SER LEU ARG TRP ALA LYS ALA HIS GLY VAL GLY GLU SEQRES 25 A 913 GLU GLU ARG ARG LYS ARG TYR PRO SER MET GLU GLU ALA SEQRES 26 A 913 MET PRO GLU ASN TYR ARG LEU LEU CYS ASP VAL ARG LYS SEQRES 27 A 913 ARG LEU GLU ASN HIS TYR ARG ASP MET GLN ASP LEU GLU SEQRES 28 A 913 PHE THR VAL GLN ASP GLY ARG LEU TRP LEU LEU GLN CYS SEQRES 29 A 913 ARG ASN GLY LYS ARG THR ILE HIS ALA ALA VAL ARG ILE SEQRES 30 A 913 ALA ILE ASP MET VAL ASN GLU GLY LEU ILE SER ARG GLU SEQRES 31 A 913 GLU ALA VAL LEU ARG ILE ASP PRO TYR GLN VAL ASP HIS SEQRES 32 A 913 LEU MET HIS PRO ASN LEU GLU PRO GLY ALA GLU LYS ALA SEQRES 33 A 913 ASN LYS PRO ILE GLY ARG GLY LEU ALA ALA SER PRO GLY SEQRES 34 A 913 ALA ALA VAL GLY GLN VAL VAL PHE ASP ALA GLU SER ALA SEQRES 35 A 913 LYS GLU TRP SER GLY ARG GLY LYS LYS VAL ILE MET VAL SEQRES 36 A 913 ARG LEU GLU THR SER PRO GLU ASP LEU ALA GLY MET ASP SEQRES 37 A 913 ALA ALA CYS GLY ILE LEU THR ALA ARG GLY GLY MET THR SEQRES 38 A 913 SER HIS ALA ALA VAL VAL ALA ARG GLY MET GLY LYS CYS SEQRES 39 A 913 CYS VAL SER GLY CYS GLY ASP MET VAL ILE ARG GLY LYS SEQRES 40 A 913 SER PHE LYS LEU ASN GLY SER VAL PHE ARG GLU GLY ASP SEQRES 41 A 913 TYR ILE THR ILE ASP GLY SER LYS GLY LEU ILE TYR ALA SEQRES 42 A 913 GLY LYS LEU LYS LEU ARG SER PRO ASP LEU LYS GLY SER SEQRES 43 A 913 PHE GLN THR ILE LEU GLN TRP CYS GLN GLU MET LYS ARG SEQRES 44 A 913 LEU GLY VAL ARG THR ASN ALA ASP THR PRO ALA ASP ALA SEQRES 45 A 913 ALA LYS ALA ARG SER PHE GLY ALA GLU GLY VAL GLY LEU SEQRES 46 A 913 CYS ARG THR GLU HIS MET PHE PHE GLU GLY SER ARG ILE SEQRES 47 A 913 ASN PHE ILE ARG GLU MET ILE LEU ALA ASP SER ALA SER SEQRES 48 A 913 GLY ARG LYS ALA ALA LEU ASP LYS LEU LEU PRO ILE GLN SEQRES 49 A 913 ARG ALA ASP PHE VAL GLY ILE LEU ARG ALA MET ARG GLY SEQRES 50 A 913 LEU PRO VAL THR ILE ARG LEU LEU ASP PRO PRO LEU HIS SEQRES 51 A 913 GLU PHE VAL PRO HIS ASP ALA ALA ALA GLN PHE GLU LEU SEQRES 52 A 913 ALA GLN LYS LEU GLY MET PRO ALA GLU LYS VAL ARG ASN SEQRES 53 A 913 ARG VAL ASN ALA LEU HIS GLU LEU ASN PRO MET LEU GLY SEQRES 54 A 913 HIS ARG GLY CYS ARG LEU GLY ILE THR TYR PRO GLU ILE SEQRES 55 A 913 TYR ASN MET GLN VAL ARG ALA ILE ILE GLU ALA ALA ILE SEQRES 56 A 913 ALA VAL SER GLU GLU GLY SER SER VAL ILE PRO GLU ILE SEQRES 57 A 913 MET VAL PRO LEU VAL GLY LYS LYS GLU GLU LEU SER LEU SEQRES 58 A 913 ILE ARG GLU GLU VAL VAL LYS THR ALA GLU ALA VAL ILE SEQRES 59 A 913 THR LYS SER GLY LYS ARG VAL HIS TYR THR VAL GLY THR SEQRES 60 A 913 MET ILE GLU VAL PRO ARG ALA ALA VAL THR ALA ASP SER SEQRES 61 A 913 ILE ALA GLN LYS ALA ASP PHE PHE SER PHE GLY THR ASN SEQRES 62 A 913 ASP LEU THR GLN MET GLY CYS GLY PHE SER ARG ASP ASP SEQRES 63 A 913 ALA GLY PRO PHE LEU ARG HIS TYR GLY ASN LEU GLY ILE SEQRES 64 A 913 TYR ALA GLN ASP PRO PHE GLN SER ILE ASP GLN GLU GLY SEQRES 65 A 913 ILE GLY GLU LEU VAL ARG ILE ALA VAL THR LYS GLY ARG SEQRES 66 A 913 ARG VAL LYS PRO MET LEU LYS MET GLY ILE CYS GLY GLU SEQRES 67 A 913 HIS GLY GLY ASP PRO ALA THR ILE GLY PHE CYS HIS LYS SEQRES 68 A 913 VAL GLY LEU ASP TYR VAL SER CYS SER PRO PHE ARG VAL SEQRES 69 A 913 PRO VAL ALA ILE VAL ALA ALA ALA HIS ALA SER ILE LYS SEQRES 70 A 913 ASP ARG ARG ALA ALA MET LYS ALA ARG LYS GLY PHE ALA SEQRES 71 A 913 ALA LYS LEU FORMUL 2 HOH *177(H2 O1) HELIX 1 1 MET A 20 GLY A 25 1 6 HELIX 2 2 LEU A 24 LEU A 37 1 14 HELIX 3 3 THR A 48 LYS A 53 1 6 HELIX 4 4 PRO A 62 GLY A 81 1 20 HELIX 5 5 ASN A 116 VAL A 124 1 9 HELIX 6 6 ARG A 125 ARG A 129 5 5 HELIX 7 7 LEU A 130 GLN A 151 1 22 HELIX 8 8 LEU A 161 GLY A 169 1 9 HELIX 9 9 PHE A 172 LEU A 176 5 5 HELIX 10 10 THR A 177 GLY A 187 1 11 HELIX 11 11 TYR A 188 THR A 196 1 9 HELIX 12 12 ASP A 203 SER A 218 1 16 HELIX 13 13 ILE A 226 ASN A 231 1 6 HELIX 14 14 GLU A 283 GLY A 288 1 6 HELIX 15 15 ASN A 296 LYS A 305 1 10 HELIX 16 16 GLY A 310 TYR A 318 1 9 HELIX 17 17 SER A 320 MET A 325 1 6 HELIX 18 18 MET A 325 ARG A 344 1 20 HELIX 19 19 THR A 369 GLU A 383 1 15 HELIX 20 20 SER A 387 ARG A 394 1 8 HELIX 21 21 ASP A 396 HIS A 405 5 10 HELIX 22 22 ASP A 437 GLU A 443 1 7 HELIX 23 23 SER A 459 LEU A 463 5 5 HELIX 24 24 SER A 481 MET A 490 1 10 HELIX 25 25 GLY A 544 LYS A 557 1 14 HELIX 26 26 THR A 567 SER A 576 1 10 HELIX 27 27 GLU A 588 PHE A 592 5 5 HELIX 28 28 SER A 595 LEU A 605 1 11 HELIX 29 29 SER A 608 ARG A 632 1 25 HELIX 30 30 PRO A 647 VAL A 652 5 6 HELIX 31 31 PRO A 669 ALA A 679 1 11 HELIX 32 32 ARG A 690 TYR A 698 1 9 HELIX 33 33 GLU A 700 GLU A 718 1 19 HELIX 34 34 LYS A 734 SER A 756 1 23 HELIX 35 35 VAL A 770 THR A 776 1 7 HELIX 36 36 THR A 776 ALA A 781 1 6 HELIX 37 37 ASN A 792 GLY A 800 1 9 HELIX 38 38 SER A 802 ASP A 805 5 4 HELIX 39 39 ALA A 806 ARG A 811 1 6 HELIX 40 40 GLY A 831 LYS A 847 1 17 HELIX 41 41 GLY A 856 GLY A 860 5 5 HELIX 42 42 ASP A 861 GLY A 872 1 12 HELIX 43 43 SER A 879 PHE A 881 5 3 HELIX 44 44 ARG A 882 LYS A 903 1 22 SHEET 1 AA 4 VAL A 6 PHE A 9 0 SHEET 2 AA 4 GLY A 44 ILE A 47 -1 O GLY A 44 N PHE A 9 SHEET 3 AA 4 VAL A 241 ALA A 245 -1 O VAL A 241 N ILE A 47 SHEET 4 AA 4 PHE A 93 SER A 97 -1 O SER A 94 N GLN A 244 SHEET 1 AB 5 GLN A 293 GLN A 294 0 SHEET 2 AB 5 PHE A 273 VAL A 278 -1 O TYR A 276 N GLN A 293 SHEET 3 AB 5 ALA A 256 PHE A 261 -1 O THR A 257 N LEU A 277 SHEET 4 AB 5 GLN A 347 GLN A 354 -1 O LEU A 349 N ALA A 260 SHEET 5 AB 5 ARG A 357 ASN A 365 -1 O ARG A 357 N GLN A 354 SHEET 1 AC 8 GLY A 420 ARG A 421 0 SHEET 2 AC 8 LYS A 527 LEU A 529 -1 N GLY A 528 O GLY A 420 SHEET 3 AC 8 ASP A 519 ILE A 523 -1 O ILE A 521 N LEU A 529 SHEET 4 AC 8 ALA A 429 VAL A 435 -1 O ALA A 430 N THR A 522 SHEET 5 AC 8 VAL A 451 ARG A 455 1 O ILE A 452 N VAL A 435 SHEET 6 AC 8 GLY A 471 THR A 474 1 O GLY A 471 N MET A 453 SHEET 7 AC 8 CYS A 494 SER A 496 1 O VAL A 495 N THR A 474 SHEET 8 AC 8 LEU A 423 SER A 426 -1 N LEU A 423 O SER A 496 SHEET 1 AD 3 VAL A 502 ILE A 503 0 SHEET 2 AD 3 PHE A 508 LEU A 510 -1 O LYS A 509 N VAL A 502 SHEET 3 AD 3 SER A 513 PHE A 515 -1 O SER A 513 N LEU A 510 SHEET 1 AE 7 GLY A 560 THR A 563 0 SHEET 2 AE 7 TYR A 875 CYS A 878 1 O VAL A 876 N ARG A 562 SHEET 3 AE 7 LYS A 851 ILE A 854 1 O ILE A 854 N SER A 877 SHEET 4 AE 7 PHE A 786 PHE A 789 1 O PHE A 787 N GLY A 853 SHEET 5 AE 7 THR A 763 ILE A 768 1 O THR A 766 N SER A 788 SHEET 6 AE 7 PRO A 725 VAL A 729 1 O PRO A 725 N THR A 763 SHEET 7 AE 7 VAL A 639 ARG A 642 1 O VAL A 639 N GLU A 726 CRYST1 121.170 153.500 65.460 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008253 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006515 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015276 0.00000