HEADER OXYGEN TRANSPORT 15-MAY-91 1HC5 OBSLTE 30-SEP-08 1HC5 1HC1 TITLE CRYSTAL STRUCTURE OF HEXAMERIC HAEMOCYANIN FROM PANULIRUS TITLE 2 INTERRUPTUS REFINED AT 3.2 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARTHROPODAN HEMOCYANIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PANULIRUS INTERRUPTUS; SOURCE 3 ORGANISM_COMMON: CALIFORNIA SPINY LOBSTER KEYWDS OXYGEN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.VOLBEDA,W.G.J.HOL REVDAT 3 30-SEP-08 1HC5 1 OBSLTE REVDAT 2 01-APR-03 1HC5 1 JRNL REVDAT 1 31-JAN-94 1HC5 0 JRNL AUTH A.VOLBEDA,W.G.HOL JRNL TITL CRYSTAL STRUCTURE OF HEXAMERIC HAEMOCYANIN FROM JRNL TITL 2 PANULIRUS INTERRUPTUS REFINED AT 3.2 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 209 249 1989 JRNL REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.VOLBEDA,M.C.FEITERS,M.G.VINCENT,E.BOUWMAN, REMARK 1 AUTH 2 B.DOBSON,K.H.KALK,J.REEDIJK,W.G.J.HOL REMARK 1 TITL SPECTROSCOPIC INVESTIGATIONS OF PANULIRUS REMARK 1 TITL 2 INTERRUPTUS HEMOCYANIN IN THE CRYSTALLINE STATE REMARK 1 REF EUR.J.BIOCHEM. V. 181 669 1989 REMARK 1 REFN ASTM EJBCAI IX ISSN 0014-2956 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.VOLBEDA,W.G.J.HOL REMARK 1 TITL PSEUDO 2-FOLD SYMMETRY IN THE COPPER-BINDING REMARK 1 TITL 2 DOMAIN OF ARTHROPODAN HAEMOCYANINS. POSSIBLE REMARK 1 TITL 3 IMPLICATIONS FOR THE EVOLUTION OF OXYGEN TRANSPORT REMARK 1 TITL 4 PROTEINS REMARK 1 REF J.MOL.BIOL. V. 206 531 1989 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.A.JEKEL,H.J.BAK,N.M.SOETER,J.M.VEREIJKEN, REMARK 1 AUTH 2 J.J.BEINTEMA REMARK 1 TITL PANULIRUS INTERRUPTUS HEMOCYANIN. THE AMINO ACID REMARK 1 TITL 2 SEQUENCE OF SUBUNIT B AND ANOMALOUS BEHAVIOR OF REMARK 1 TITL 3 SUBUNITS A AND B ON POLYACRYLAMIDE GEL REMARK 1 TITL 4 ELECTROPHORESIS IN THE PRESENCE OF SDS REMARK 1 REF EUR.J.BIOCHEM. V. 178 403 1988 REMARK 1 REFN ASTM EJBCAI IX ISSN 0014-2956 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.J.BAK,J.J.BEINTEMA REMARK 1 TITL PANULIRUS INTERRUPTUS HEMOCYANIN. THE ELUCIDATION REMARK 1 TITL 2 OF THE COMPLETE AMINO ACID SEQUENCE OF SUBUNIT A REMARK 1 REF EUR.J.BIOCHEM. V. 169 333 1987 REMARK 1 REFN ASTM EJBCAI IX ISSN 0014-2956 REMARK 1 REFERENCE 5 REMARK 1 AUTH W.P.J.GAYKEMA,A.VOLBEDA,W.G.J.HOL REMARK 1 TITL STRUCTURE DETERMINATION OF PANULIRUS INTERRUPTUS REMARK 1 TITL 2 HAEMOCYANIN AT 3.2 ANGSTROMS RESOLUTION. REMARK 1 TITL 3 SUCCESSFUL PHASE EXTENSION BY SIXFOLD DENSITY REMARK 1 TITL 4 AVERAGING REMARK 1 REF J.MOL.BIOL. V. 187 255 1986 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 6 REMARK 1 AUTH B.LINZEN,N.M.SOETER,A.F.RIGGS,H.-J.SCHNEIDER, REMARK 1 AUTH 2 W.SCHARTAU,M.D.MOORE,E.YOKOTA,P.Q.BEHRENS, REMARK 1 AUTH 3 H.NAKASHIMA,T.TAKAGI,T.NEMOTO,J.M.VEREIJKEN, REMARK 1 AUTH 4 H.J.BAK,J.J.BEINTEMA,A.VOLBEDA,W.P.J.GAYKEMA, REMARK 1 AUTH 5 W.G.J.HOL REMARK 1 TITL THE STRUCTURE OF ARTHROPOD HEMOCYANINS REMARK 1 REF SCIENCE V. 229 519 1985 REMARK 1 REFN ASTM SCIEAS US ISSN 0036-8075 REMARK 1 REFERENCE 7 REMARK 1 AUTH W.P.J.GAYKEMA,W.G.J.HOL,J.M.VEREIJKEN,N.M.SOETER, REMARK 1 AUTH 2 H.J.BAK,J.J.BEINTEMA REMARK 1 TITL 3.2 ANGSTROMS STRUCTURE OF THE COPPER-CONTAINING, REMARK 1 TITL 2 OXYGEN-CARRYING PROTEIN PANULIRUS INTERRUPTUS REMARK 1 TITL 3 HAEMOCYANIN REMARK 1 REF NATURE V. 309 23 1984 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 59193 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5173 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.009 ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HC5 COMPLIES WITH FORMAT V. 3.1, 01-AUG-2007 REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,1/2+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 96.55000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSEQI REMARK 465 ASP A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 THR A 171 REMARK 465 GLY A 172 REMARK 465 THR A 173 REMARK 465 LYS A 174 REMARK 465 HIS A 551 REMARK 465 ASP A 552 REMARK 465 ASN A 597 REMARK 465 GLY A 598 REMARK 465 GLY A 599 REMARK 465 HIS A 600 REMARK 465 ASP A 601 REMARK 465 TYR A 602 REMARK 465 GLY A 603 REMARK 465 GLY A 604 REMARK 465 THR A 605 REMARK 465 GLU A 654 REMARK 465 HIS A 655 REMARK 465 HIS A 656 REMARK 465 ASP A 657 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 N PHE A 408 OD1 ASN A 641 2.04 REMARK 500 O ASP A 130 OE1 GLU A 559 2.06 REMARK 500 OH TYR A 183 OE1 GLU A 234 2.11 REMARK 500 OG SER A 330 O GLY A 341 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 550 C GLY A 550 O 0.125 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 7 CA - CB - CG ANGL. DEV. = 22.2 DEGREES REMARK 500 LEU A 30 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 LYS A 31 CA - CB - CG ANGL. DEV. = 13.2 DEGREES REMARK 500 ASP A 32 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 62 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 HIS A 63 N - CA - CB ANGL. DEV. = 11.2 DEGREES REMARK 500 HIS A 63 CA - CB - CG ANGL. DEV. = 10.7 DEGREES REMARK 500 GLU A 67 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 GLU A 67 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 GLN A 92 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 PHE A 99 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 TYR A 138 CA - CB - CG ANGL. DEV. = 11.4 DEGREES REMARK 500 SER A 169 N - CA - CB ANGL. DEV. = -10.1 DEGREES REMARK 500 SER A 169 N - CA - C ANGL. DEV. = 21.4 DEGREES REMARK 500 GLN A 179 N - CA - C ANGL. DEV. = -18.3 DEGREES REMARK 500 GLN A 179 CA - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 GLU A 206 OE1 - CD - OE2 ANGL. DEV. = -15.2 DEGREES REMARK 500 GLU A 206 CG - CD - OE2 ANGL. DEV. = 24.3 DEGREES REMARK 500 ASP A 207 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 LYS A 216 N - CA - CB ANGL. DEV. = 11.9 DEGREES REMARK 500 LEU A 219 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 ARG A 271 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP A 279 CB - CA - C ANGL. DEV. = 12.7 DEGREES REMARK 500 ASP A 279 N - CA - CB ANGL. DEV. = -11.8 DEGREES REMARK 500 ASP A 279 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 316 CD - NE - CZ ANGL. DEV. = 21.5 DEGREES REMARK 500 GLU A 322 N - CA - CB ANGL. DEV. = 11.5 DEGREES REMARK 500 GLU A 322 CA - CB - CG ANGL. DEV. = 20.9 DEGREES REMARK 500 LYS A 360 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 HIS A 370 CA - CB - CG ANGL. DEV. = 10.8 DEGREES REMARK 500 MET A 387 CA - CB - CG ANGL. DEV. = 11.8 DEGREES REMARK 500 GLU A 444 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ASN A 489 CB - CA - C ANGL. DEV. = 12.6 DEGREES REMARK 500 THR A 494 N - CA - C ANGL. DEV. = 20.5 DEGREES REMARK 500 ASP A 496 N - CA - CB ANGL. DEV. = 11.6 DEGREES REMARK 500 ASP A 496 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 CYS A 502 CA - CB - SG ANGL. DEV. = 7.7 DEGREES REMARK 500 GLU A 520 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG A 521 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 620 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ASP A 637 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 LYS A 643 CA - CB - CG ANGL. DEV. = 20.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 7 -50.25 169.30 REMARK 500 ALA A 8 8.64 -63.41 REMARK 500 LYS A 20 51.23 34.82 REMARK 500 PRO A 24 135.79 -36.56 REMARK 500 PRO A 39 -3.68 -58.73 REMARK 500 ASP A 42 67.91 -177.14 REMARK 500 SER A 44 -27.77 -171.16 REMARK 500 HIS A 49 32.41 70.42 REMARK 500 HIS A 63 77.55 40.95 REMARK 500 VAL A 89 -74.73 -89.47 REMARK 500 LEU A 90 -37.66 -30.58 REMARK 500 GLN A 92 40.40 -100.10 REMARK 500 ALA A 104 -64.81 -173.13 REMARK 500 ASN A 147 173.19 -56.56 REMARK 500 ASN A 176 -23.59 165.04 REMARK 500 ARG A 177 -118.52 -126.70 REMARK 500 GLU A 178 33.54 -161.32 REMARK 500 ASP A 214 -71.55 -42.15 REMARK 500 PRO A 242 145.87 -33.70 REMARK 500 VAL A 283 -71.26 -90.00 REMARK 500 ALA A 284 156.20 176.11 REMARK 500 ARG A 316 55.12 -93.45 REMARK 500 SER A 330 75.53 73.56 REMARK 500 GLN A 354 -8.44 -56.93 REMARK 500 ASP A 356 83.83 -170.08 REMARK 500 GLU A 369 40.45 -97.83 REMARK 500 PRO A 400 171.10 -54.73 REMARK 500 PHE A 408 72.30 -114.82 REMARK 500 MET A 411 125.23 -31.08 REMARK 500 ASP A 427 -170.31 -64.36 REMARK 500 LEU A 433 20.89 -78.97 REMARK 500 ASN A 488 46.77 74.70 REMARK 500 ASN A 489 -34.48 -167.34 REMARK 500 THR A 492 98.62 53.25 REMARK 500 LEU A 495 46.11 38.33 REMARK 500 ASP A 496 -55.87 -164.28 REMARK 500 PRO A 516 126.23 -29.13 REMARK 500 SER A 523 -37.92 -38.41 REMARK 500 ASP A 554 53.18 -168.96 REMARK 500 ALA A 557 -50.70 -170.27 REMARK 500 ARG A 560 -82.15 -150.95 REMARK 500 SER A 561 65.14 61.28 REMARK 500 LEU A 569 -76.52 -34.67 REMARK 500 SER A 573 -163.99 63.92 REMARK 500 ASP A 592 -80.33 -68.67 REMARK 500 THR A 593 38.67 -72.33 REMARK 500 GLU A 594 32.67 -72.46 REMARK 500 VAL A 611 -31.23 -38.62 REMARK 500 PRO A 621 -170.61 -66.16 REMARK 500 ARG A 634 -35.09 -38.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M=MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 693 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH A 739 DISTANCE = 5.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 665 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 194 NE2 REMARK 620 2 HIS A 198 NE2 112.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 666 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 348 NE2 REMARK 620 2 HIS A 344 NE2 97.9 REMARK 620 3 HIS A 384 NE2 114.0 104.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 665 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 666 DBREF 1HC5 A 1 657 UNP P04254 HCYA_PANIN 1 657 SEQADV 1HC5 ASP A 32 UNP P04254 GLU 32 CONFLICT SEQADV 1HC5 PRO A 163 UNP P04254 GLN 163 CONFLICT SEQADV 1HC5 ASN A 458 UNP P04254 LYS 458 CONFLICT SEQADV 1HC5 SER A 514 UNP P04254 LYS 514 CONFLICT SEQRES 1 A 657 ASP ALA LEU GLY THR GLY ASN ALA GLN LYS GLN GLN ASP SEQRES 2 A 657 ILE ASN HIS LEU LEU ASP LYS ILE TYR GLU PRO THR LYS SEQRES 3 A 657 TYR PRO ASP LEU LYS ASP ILE ALA GLU ASN PHE ASN PRO SEQRES 4 A 657 LEU GLY ASP THR SER ILE TYR ASN ASP HIS GLY ALA ALA SEQRES 5 A 657 VAL GLU THR LEU MET LYS GLU LEU ASN ASP HIS ARG LEU SEQRES 6 A 657 LEU GLU GLN ARG HIS TRP TYR SER LEU PHE ASN THR ARG SEQRES 7 A 657 GLN ARG LYS GLU ALA LEU MET LEU PHE ALA VAL LEU ASN SEQRES 8 A 657 GLN CYS LYS GLU TRP TYR CYS PHE ARG SER ASN ALA ALA SEQRES 9 A 657 TYR PHE ARG GLU ARG MET ASN GLU GLY GLU PHE VAL TYR SEQRES 10 A 657 ALA LEU TYR VAL SER VAL ILE HIS SER LYS LEU GLY ASP SEQRES 11 A 657 GLY ILE VAL LEU PRO PRO LEU TYR GLN ILE THR PRO HIS SEQRES 12 A 657 MET PHE THR ASN SER GLU VAL ILE ASP LYS ALA TYR SER SEQRES 13 A 657 ALA LYS MET THR GLN LYS PRO GLY THR PHE ASN VAL SER SEQRES 14 A 657 PHE THR GLY THR LYS LYS ASN ARG GLU GLN ARG VAL ALA SEQRES 15 A 657 TYR PHE GLY GLU ASP ILE GLY MET ASN ILE HIS HIS VAL SEQRES 16 A 657 THR TRP HIS MET ASP PHE PRO PHE TRP TRP GLU ASP SER SEQRES 17 A 657 TYR GLY TYR HIS LEU ASP ARG LYS GLY GLU LEU PHE PHE SEQRES 18 A 657 TRP VAL HIS HIS GLN LEU THR ALA ARG PHE ASP PHE GLU SEQRES 19 A 657 ARG LEU SER ASN TRP LEU ASP PRO VAL ASP GLU LEU HIS SEQRES 20 A 657 TRP ASP ARG ILE ILE ARG GLU GLY PHE ALA PRO LEU THR SEQRES 21 A 657 SER TYR LYS TYR GLY GLY GLU PHE PRO VAL ARG PRO ASP SEQRES 22 A 657 ASN ILE HIS PHE GLU ASP VAL ASP GLY VAL ALA HIS VAL SEQRES 23 A 657 HIS ASP LEU GLU ILE THR GLU SER ARG ILE HIS GLU ALA SEQRES 24 A 657 ILE ASP HIS GLY TYR ILE THR ASP SER ASP GLY HIS THR SEQRES 25 A 657 ILE ASP ILE ARG GLN PRO LYS GLY ILE GLU LEU LEU GLY SEQRES 26 A 657 ASP ILE ILE GLU SER SER LYS TYR SER SER ASN VAL GLN SEQRES 27 A 657 TYR TYR GLY SER LEU HIS ASN THR ALA HIS VAL MET LEU SEQRES 28 A 657 GLY ARG GLN GLY ASP PRO HIS GLY LYS PHE ASN LEU PRO SEQRES 29 A 657 PRO GLY VAL MET GLU HIS PHE GLU THR ALA THR ARG ASP SEQRES 30 A 657 PRO SER PHE PHE ARG LEU HIS LYS TYR MET ASP ASN ILE SEQRES 31 A 657 PHE LYS LYS HIS THR ASP SER PHE PRO PRO TYR THR HIS SEQRES 32 A 657 ASP ASN LEU GLU PHE SER GLY MET VAL VAL ASN GLY VAL SEQRES 33 A 657 ALA ILE ASP GLY GLU LEU ILE THR PHE PHE ASP GLU PHE SEQRES 34 A 657 GLN TYR SER LEU ILE ASN ALA VAL ASP SER GLY GLU ASN SEQRES 35 A 657 ILE GLU ASP VAL GLU ILE ASN ALA ARG VAL HIS ARG LEU SEQRES 36 A 657 ASN HIS ASN GLU PHE THR TYR LYS ILE THR MET SER ASN SEQRES 37 A 657 ASN ASN ASP GLY GLU ARG LEU ALA THR PHE ARG ILE PHE SEQRES 38 A 657 LEU CYS PRO ILE GLU ASP ASN ASN GLY ILE THR LEU THR SEQRES 39 A 657 LEU ASP GLU ALA ARG TRP PHE CYS ILE GLU LEU ASP LYS SEQRES 40 A 657 PHE PHE GLN LYS VAL PRO SER GLY PRO GLU THR ILE GLU SEQRES 41 A 657 ARG SER SER LYS ASP SER SER VAL THR VAL PRO ASP MET SEQRES 42 A 657 PRO SER PHE GLN SER LEU LYS GLU GLN ALA ASP ASN ALA SEQRES 43 A 657 VAL ASN GLY GLY HIS ASP LEU ASP LEU SER ALA TYR GLU SEQRES 44 A 657 ARG SER CYS GLY ILE PRO ASP ARG MET LEU LEU PRO LYS SEQRES 45 A 657 SER LYS PRO GLU GLY MET GLU PHE ASN LEU TYR VAL ALA SEQRES 46 A 657 VAL THR ASP GLY ASP LYS ASP THR GLU GLY HIS ASN GLY SEQRES 47 A 657 GLY HIS ASP TYR GLY GLY THR HIS ALA GLN CYS GLY VAL SEQRES 48 A 657 HIS GLY GLU ALA TYR PRO ASP ASN ARG PRO LEU GLY TYR SEQRES 49 A 657 PRO LEU GLU ARG ARG ILE PRO ASP GLU ARG VAL ILE ASP SEQRES 50 A 657 GLY VAL SER ASN ILE LYS HIS VAL VAL VAL LYS ILE VAL SEQRES 51 A 657 HIS HIS LEU GLU HIS HIS ASP HET CU A 665 1 HET CU A 666 1 HETNAM CU COPPER (II) ION FORMUL 2 CU 2(CU 2+) FORMUL 4 HOH *186(H2 O) HELIX 1 1 GLN A 9 LEU A 18 1 10 HELIX 2 2 TYR A 27 PHE A 37 1 11 HELIX 3 3 ALA A 52 ASP A 62 1 11 HELIX 4 4 ASN A 76 GLN A 92 1 17 HELIX 5 5 GLU A 95 PHE A 106 1 12 HELIX 6 6 ASN A 111 SER A 126 1 16 HELIX 7 7 PRO A 136 THR A 141 1 6 HELIX 8 8 ASN A 147 GLN A 161 1 15 HELIX 9 9 VAL A 181 GLU A 186 1 6 HELIX 10 10 ASP A 187 PHE A 201 1 15 HELIX 11 11 GLU A 206 GLY A 210 5 5 HELIX 12 12 GLY A 217 SER A 237 1 21 HELIX 13 13 HIS A 285 GLY A 303 1 19 HELIX 14 14 LYS A 319 GLU A 329 1 11 HELIX 15 15 SER A 342 ARG A 353 1 12 HELIX 16 16 GLN A 354 ASP A 356 5 3 HELIX 17 17 THR A 373 ASP A 377 5 5 HELIX 18 18 PRO A 378 ASP A 396 1 19 HELIX 19 19 THR A 402 GLU A 407 1 6 HELIX 20 20 LYS A 524 SER A 526 5 3 HELIX 21 21 SER A 535 ALA A 546 1 12 HELIX 22 22 ARG A 567 LEU A 569 5 3 HELIX 23 23 GLY A 589 THR A 593 1 5 HELIX 24 24 VAL A 635 VAL A 639 5 5 SHEET 1 A 3 GLY A 164 ASN A 167 0 SHEET 2 A 3 ILE A 448 VAL A 452 1 O ASN A 449 N PHE A 166 SHEET 3 A 3 PHE A 429 SER A 432 -1 N PHE A 429 O VAL A 452 SHEET 1 B 2 ILE A 251 ILE A 252 0 SHEET 2 B 2 ILE A 275 HIS A 276 -1 O ILE A 275 N ILE A 252 SHEET 1 C 2 TYR A 304 THR A 306 0 SHEET 2 C 2 THR A 312 ASP A 314 -1 N ILE A 313 O ILE A 305 SHEET 1 D 3 VAL A 412 ASP A 419 0 SHEET 2 D 3 THR A 461 SER A 467 -1 O THR A 461 N ASP A 419 SHEET 3 D 3 GLU A 517 SER A 522 -1 O GLU A 517 N MET A 466 SHEET 1 E 6 LEU A 455 HIS A 457 0 SHEET 2 E 6 ILE A 423 PHE A 426 -1 N PHE A 425 O ASN A 456 SHEET 3 E 6 ILE A 642 HIS A 651 1 O VAL A 650 N THR A 424 SHEET 4 E 6 MET A 578 ASP A 588 -1 O MET A 578 N ILE A 649 SHEET 5 E 6 ARG A 474 CYS A 483 -1 N THR A 477 O THR A 587 SHEET 6 E 6 ILE A 503 VAL A 512 -1 O ILE A 503 N LEU A 482 SHEET 1 F 2 THR A 529 VAL A 530 0 SHEET 2 F 2 ILE A 564 PRO A 565 1 O ILE A 564 N VAL A 530 SSBOND 1 CYS A 93 CYS A 98 1555 1555 2.07 SSBOND 2 CYS A 483 CYS A 502 1555 1555 2.05 SSBOND 3 CYS A 562 CYS A 609 1555 1555 2.05 LINK CU CU A 665 NE2 HIS A 194 1555 1555 1.96 LINK CU CU A 665 NE2 HIS A 198 1555 1555 1.96 LINK CU CU A 666 NE2 HIS A 348 1555 1555 2.64 LINK CU CU A 666 NE2 HIS A 344 1555 1555 1.96 LINK CU CU A 666 NE2 HIS A 384 1555 1555 2.12 CISPEP 1 TYR A 624 PRO A 625 0 0.74 SITE 1 AC1 2 HIS A 194 HIS A 198 SITE 1 AC2 2 HIS A 344 HIS A 384 CRYST1 119.800 193.100 122.200 90.00 118.10 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008347 0.000000 0.004457 0.00000 SCALE2 0.000000 0.005179 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009277 0.00000