data_1HD2 # _entry.id 1HD2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1HD2 pdb_00001hd2 10.2210/pdb1hd2/pdb PDBE EBI-5525 ? ? WWPDB D_1290005525 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-28 2 'Structure model' 1 1 2015-04-15 3 'Structure model' 1 2 2019-05-22 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2020-03-04 6 'Structure model' 1 5 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' Other 6 2 'Structure model' 'Source and taxonomy' 7 2 'Structure model' 'Version format compliance' 8 3 'Structure model' 'Data collection' 9 3 'Structure model' Other 10 3 'Structure model' 'Refinement description' 11 4 'Structure model' 'Data collection' 12 5 'Structure model' 'Derived calculations' 13 5 'Structure model' Other 14 6 'Structure model' 'Data collection' 15 6 'Structure model' 'Database references' 16 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_database_proc 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' refine 4 4 'Structure model' diffrn_source 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' pdbx_struct_assembly 7 5 'Structure model' pdbx_struct_assembly_gen 8 5 'Structure model' pdbx_struct_assembly_prop 9 5 'Structure model' pdbx_struct_oper_list 10 6 'Structure model' chem_comp_atom 11 6 'Structure model' chem_comp_bond 12 6 'Structure model' database_2 13 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 2 3 'Structure model' '_refine.pdbx_ls_cross_valid_method' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 5 'Structure model' '_pdbx_database_status.status_code_sf' 5 5 'Structure model' '_pdbx_struct_assembly.details' 6 5 'Structure model' '_pdbx_struct_assembly.method_details' 7 5 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 8 5 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 9 5 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' 10 6 'Structure model' '_database_2.pdbx_DOI' 11 6 'Structure model' '_database_2.pdbx_database_accession' 12 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HD2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-11-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Declercq, J.P.' 1 'Evrard, C.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure of Human Peroxiredoxin 5, a Novel Type of Mammalian Peroxiredoxin at 1.5 A Resolution.' J.Mol.Biol. 311 751 ? 2001 JMOBAK UK 0022-2836 0070 ? 11518528 10.1006/JMBI.2001.4853 1 'Cloning and Characterization of Aoeb166, a Novel Mammalian Antioxidant Enzyme of the Peroxiredoxin Family' J.Biol.Chem. 274 30451 ? 1999 JBCHA3 US 0021-9258 0071 ? 10521424 10.1074/JBC.274.43.30451 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Declercq, J.P.' 1 ? primary 'Evrard, C.' 2 ? primary 'Clippe, A.' 3 ? primary 'Stricht, D.V.' 4 ? primary 'Bernard, A.' 5 ? primary 'Knoops, B.' 6 ? 1 'Knoops, B.' 7 ? 1 'Clippe, A.' 8 ? 1 'Bogard, C.' 9 ? 1 'Arsalane, K.' 10 ? 1 'Wattiez, R.' 11 ? 1 'Hermans, C.' 12 ? 1 'Duconseille, E.' 13 ? 1 'Falmagne, P.' 14 ? 1 'Bernard, A.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PEROXIREDOXIN 5 RESIDUES 54-214' 16919.514 1 ? ? 'RESIDUES 54-214' ? 2 non-polymer syn 'BENZOIC ACID' 122.121 1 ? ? ? ? 3 non-polymer syn 'BROMIDE ION' 79.904 5 ? ? ? ? 4 water nat water 18.015 221 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PRDX5, PRXV, AOEB166, PMP20, ARC1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFV TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQ L ; _entity_poly.pdbx_seq_one_letter_code_can ;APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFV TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQ L ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BENZOIC ACID' BEZ 3 'BROMIDE ION' BR 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ILE n 1 4 LYS n 1 5 VAL n 1 6 GLY n 1 7 ASP n 1 8 ALA n 1 9 ILE n 1 10 PRO n 1 11 ALA n 1 12 VAL n 1 13 GLU n 1 14 VAL n 1 15 PHE n 1 16 GLU n 1 17 GLY n 1 18 GLU n 1 19 PRO n 1 20 GLY n 1 21 ASN n 1 22 LYS n 1 23 VAL n 1 24 ASN n 1 25 LEU n 1 26 ALA n 1 27 GLU n 1 28 LEU n 1 29 PHE n 1 30 LYS n 1 31 GLY n 1 32 LYS n 1 33 LYS n 1 34 GLY n 1 35 VAL n 1 36 LEU n 1 37 PHE n 1 38 GLY n 1 39 VAL n 1 40 PRO n 1 41 GLY n 1 42 ALA n 1 43 PHE n 1 44 THR n 1 45 PRO n 1 46 GLY n 1 47 CYS n 1 48 SER n 1 49 LYS n 1 50 THR n 1 51 HIS n 1 52 LEU n 1 53 PRO n 1 54 GLY n 1 55 PHE n 1 56 VAL n 1 57 GLU n 1 58 GLN n 1 59 ALA n 1 60 GLU n 1 61 ALA n 1 62 LEU n 1 63 LYS n 1 64 ALA n 1 65 LYS n 1 66 GLY n 1 67 VAL n 1 68 GLN n 1 69 VAL n 1 70 VAL n 1 71 ALA n 1 72 CYS n 1 73 LEU n 1 74 SER n 1 75 VAL n 1 76 ASN n 1 77 ASP n 1 78 ALA n 1 79 PHE n 1 80 VAL n 1 81 THR n 1 82 GLY n 1 83 GLU n 1 84 TRP n 1 85 GLY n 1 86 ARG n 1 87 ALA n 1 88 HIS n 1 89 LYS n 1 90 ALA n 1 91 GLU n 1 92 GLY n 1 93 LYS n 1 94 VAL n 1 95 ARG n 1 96 LEU n 1 97 LEU n 1 98 ALA n 1 99 ASP n 1 100 PRO n 1 101 THR n 1 102 GLY n 1 103 ALA n 1 104 PHE n 1 105 GLY n 1 106 LYS n 1 107 GLU n 1 108 THR n 1 109 ASP n 1 110 LEU n 1 111 LEU n 1 112 LEU n 1 113 ASP n 1 114 ASP n 1 115 SER n 1 116 LEU n 1 117 VAL n 1 118 SER n 1 119 ILE n 1 120 PHE n 1 121 GLY n 1 122 ASN n 1 123 ARG n 1 124 ARG n 1 125 LEU n 1 126 LYS n 1 127 ARG n 1 128 PHE n 1 129 SER n 1 130 MET n 1 131 VAL n 1 132 VAL n 1 133 GLN n 1 134 ASP n 1 135 GLY n 1 136 ILE n 1 137 VAL n 1 138 LYS n 1 139 ALA n 1 140 LEU n 1 141 ASN n 1 142 VAL n 1 143 GLU n 1 144 PRO n 1 145 ASP n 1 146 GLY n 1 147 THR n 1 148 GLY n 1 149 LEU n 1 150 THR n 1 151 CYS n 1 152 SER n 1 153 LEU n 1 154 ALA n 1 155 PRO n 1 156 ASN n 1 157 ILE n 1 158 ILE n 1 159 SER n 1 160 GLN n 1 161 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PRDX5, AOEB166, PMP20, ARC1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ LUNG _entity_src_gen.pdbx_gene_src_organelle MITOCHONDRIA-CYTOSOL-PEROXISOME _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location MITOCHONDRIA-CYTOSOL-PEROXISOME _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1007065 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain M15 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PQE-30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEZ non-polymer . 'BENZOIC ACID' ? 'C7 H6 O2' 122.121 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 MET 130 130 130 MET MET A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 LEU 161 161 161 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEZ 1 201 201 BEZ BEZ A . C 3 BR 1 301 301 BR BR A . D 3 BR 1 302 302 BR BR A . E 3 BR 1 303 303 BR BR A . F 3 BR 1 304 304 BR BR A . G 3 BR 1 305 305 BR BR A . H 4 HOH 1 2001 2001 HOH HOH A . H 4 HOH 2 2002 2002 HOH HOH A . H 4 HOH 3 2003 2003 HOH HOH A . H 4 HOH 4 2004 2004 HOH HOH A . H 4 HOH 5 2005 2005 HOH HOH A . H 4 HOH 6 2006 2006 HOH HOH A . H 4 HOH 7 2007 2007 HOH HOH A . H 4 HOH 8 2008 2008 HOH HOH A . H 4 HOH 9 2009 2009 HOH HOH A . H 4 HOH 10 2010 2010 HOH HOH A . H 4 HOH 11 2011 2011 HOH HOH A . H 4 HOH 12 2012 2012 HOH HOH A . H 4 HOH 13 2013 2013 HOH HOH A . H 4 HOH 14 2014 2014 HOH HOH A . H 4 HOH 15 2015 2015 HOH HOH A . H 4 HOH 16 2016 2016 HOH HOH A . H 4 HOH 17 2017 2017 HOH HOH A . H 4 HOH 18 2018 2018 HOH HOH A . H 4 HOH 19 2019 2019 HOH HOH A . H 4 HOH 20 2020 2020 HOH HOH A . H 4 HOH 21 2021 2021 HOH HOH A . H 4 HOH 22 2022 2022 HOH HOH A . H 4 HOH 23 2023 2023 HOH HOH A . H 4 HOH 24 2024 2024 HOH HOH A . H 4 HOH 25 2025 2025 HOH HOH A . H 4 HOH 26 2026 2026 HOH HOH A . H 4 HOH 27 2027 2027 HOH HOH A . H 4 HOH 28 2028 2028 HOH HOH A . H 4 HOH 29 2029 2029 HOH HOH A . H 4 HOH 30 2030 2030 HOH HOH A . H 4 HOH 31 2031 2031 HOH HOH A . H 4 HOH 32 2032 2032 HOH HOH A . H 4 HOH 33 2033 2033 HOH HOH A . H 4 HOH 34 2034 2034 HOH HOH A . H 4 HOH 35 2035 2035 HOH HOH A . H 4 HOH 36 2036 2036 HOH HOH A . H 4 HOH 37 2037 2037 HOH HOH A . H 4 HOH 38 2038 2038 HOH HOH A . H 4 HOH 39 2039 2039 HOH HOH A . H 4 HOH 40 2040 2040 HOH HOH A . H 4 HOH 41 2041 2041 HOH HOH A . H 4 HOH 42 2042 2042 HOH HOH A . H 4 HOH 43 2043 2043 HOH HOH A . H 4 HOH 44 2044 2044 HOH HOH A . H 4 HOH 45 2045 2045 HOH HOH A . H 4 HOH 46 2046 2046 HOH HOH A . H 4 HOH 47 2047 2047 HOH HOH A . H 4 HOH 48 2048 2048 HOH HOH A . H 4 HOH 49 2049 2049 HOH HOH A . H 4 HOH 50 2050 2050 HOH HOH A . H 4 HOH 51 2051 2051 HOH HOH A . H 4 HOH 52 2052 2052 HOH HOH A . H 4 HOH 53 2053 2053 HOH HOH A . H 4 HOH 54 2054 2054 HOH HOH A . H 4 HOH 55 2055 2055 HOH HOH A . H 4 HOH 56 2056 2056 HOH HOH A . H 4 HOH 57 2057 2057 HOH HOH A . H 4 HOH 58 2058 2058 HOH HOH A . H 4 HOH 59 2059 2059 HOH HOH A . H 4 HOH 60 2060 2060 HOH HOH A . H 4 HOH 61 2061 2061 HOH HOH A . H 4 HOH 62 2062 2062 HOH HOH A . H 4 HOH 63 2063 2063 HOH HOH A . H 4 HOH 64 2064 2064 HOH HOH A . H 4 HOH 65 2065 2065 HOH HOH A . H 4 HOH 66 2066 2066 HOH HOH A . H 4 HOH 67 2067 2067 HOH HOH A . H 4 HOH 68 2068 2068 HOH HOH A . H 4 HOH 69 2069 2069 HOH HOH A . H 4 HOH 70 2070 2070 HOH HOH A . H 4 HOH 71 2071 2071 HOH HOH A . H 4 HOH 72 2072 2072 HOH HOH A . H 4 HOH 73 2073 2073 HOH HOH A . H 4 HOH 74 2074 2074 HOH HOH A . H 4 HOH 75 2075 2075 HOH HOH A . H 4 HOH 76 2076 2076 HOH HOH A . H 4 HOH 77 2077 2077 HOH HOH A . H 4 HOH 78 2078 2078 HOH HOH A . H 4 HOH 79 2079 2079 HOH HOH A . H 4 HOH 80 2080 2080 HOH HOH A . H 4 HOH 81 2081 2081 HOH HOH A . H 4 HOH 82 2082 2082 HOH HOH A . H 4 HOH 83 2083 2083 HOH HOH A . H 4 HOH 84 2084 2084 HOH HOH A . H 4 HOH 85 2085 2085 HOH HOH A . H 4 HOH 86 2086 2086 HOH HOH A . H 4 HOH 87 2087 2087 HOH HOH A . H 4 HOH 88 2088 2088 HOH HOH A . H 4 HOH 89 2089 2089 HOH HOH A . H 4 HOH 90 2090 2090 HOH HOH A . H 4 HOH 91 2091 2091 HOH HOH A . H 4 HOH 92 2092 2092 HOH HOH A . H 4 HOH 93 2093 2093 HOH HOH A . H 4 HOH 94 2094 2094 HOH HOH A . H 4 HOH 95 2095 2095 HOH HOH A . H 4 HOH 96 2096 2096 HOH HOH A . H 4 HOH 97 2097 2097 HOH HOH A . H 4 HOH 98 2098 2098 HOH HOH A . H 4 HOH 99 2099 2099 HOH HOH A . H 4 HOH 100 2100 2100 HOH HOH A . H 4 HOH 101 2101 2101 HOH HOH A . H 4 HOH 102 2102 2102 HOH HOH A . H 4 HOH 103 2103 2103 HOH HOH A . H 4 HOH 104 2104 2104 HOH HOH A . H 4 HOH 105 2105 2105 HOH HOH A . H 4 HOH 106 2106 2106 HOH HOH A . H 4 HOH 107 2107 2107 HOH HOH A . H 4 HOH 108 2108 2108 HOH HOH A . H 4 HOH 109 2109 2109 HOH HOH A . H 4 HOH 110 2110 2110 HOH HOH A . H 4 HOH 111 2111 2111 HOH HOH A . H 4 HOH 112 2112 2112 HOH HOH A . H 4 HOH 113 2113 2113 HOH HOH A . H 4 HOH 114 2114 2114 HOH HOH A . H 4 HOH 115 2115 2115 HOH HOH A . H 4 HOH 116 2116 2116 HOH HOH A . H 4 HOH 117 2117 2117 HOH HOH A . H 4 HOH 118 2118 2118 HOH HOH A . H 4 HOH 119 2119 2119 HOH HOH A . H 4 HOH 120 2120 2120 HOH HOH A . H 4 HOH 121 2121 2121 HOH HOH A . H 4 HOH 122 2122 2122 HOH HOH A . H 4 HOH 123 2123 2123 HOH HOH A . H 4 HOH 124 2124 2124 HOH HOH A . H 4 HOH 125 2125 2125 HOH HOH A . H 4 HOH 126 2126 2126 HOH HOH A . H 4 HOH 127 2127 2127 HOH HOH A . H 4 HOH 128 2128 2128 HOH HOH A . H 4 HOH 129 2129 2129 HOH HOH A . H 4 HOH 130 2130 2130 HOH HOH A . H 4 HOH 131 2131 2131 HOH HOH A . H 4 HOH 132 2132 2132 HOH HOH A . H 4 HOH 133 2133 2133 HOH HOH A . H 4 HOH 134 2134 2134 HOH HOH A . H 4 HOH 135 2135 2135 HOH HOH A . H 4 HOH 136 2136 2136 HOH HOH A . H 4 HOH 137 2137 2137 HOH HOH A . H 4 HOH 138 2138 2138 HOH HOH A . H 4 HOH 139 2139 2139 HOH HOH A . H 4 HOH 140 2140 2140 HOH HOH A . H 4 HOH 141 2141 2141 HOH HOH A . H 4 HOH 142 2142 2142 HOH HOH A . H 4 HOH 143 2143 2143 HOH HOH A . H 4 HOH 144 2144 2144 HOH HOH A . H 4 HOH 145 2145 2145 HOH HOH A . H 4 HOH 146 2146 2146 HOH HOH A . H 4 HOH 147 2147 2147 HOH HOH A . H 4 HOH 148 2148 2148 HOH HOH A . H 4 HOH 149 2149 2149 HOH HOH A . H 4 HOH 150 2150 2150 HOH HOH A . H 4 HOH 151 2151 2151 HOH HOH A . H 4 HOH 152 2152 2152 HOH HOH A . H 4 HOH 153 2153 2153 HOH HOH A . H 4 HOH 154 2154 2154 HOH HOH A . H 4 HOH 155 2155 2155 HOH HOH A . H 4 HOH 156 2156 2156 HOH HOH A . H 4 HOH 157 2157 2157 HOH HOH A . H 4 HOH 158 2158 2158 HOH HOH A . H 4 HOH 159 2159 2159 HOH HOH A . H 4 HOH 160 2160 2160 HOH HOH A . H 4 HOH 161 2161 2161 HOH HOH A . H 4 HOH 162 2162 2162 HOH HOH A . H 4 HOH 163 2163 2163 HOH HOH A . H 4 HOH 164 2164 2164 HOH HOH A . H 4 HOH 165 2165 2165 HOH HOH A . H 4 HOH 166 2166 2166 HOH HOH A . H 4 HOH 167 2167 2167 HOH HOH A . H 4 HOH 168 2168 2168 HOH HOH A . H 4 HOH 169 2169 2169 HOH HOH A . H 4 HOH 170 2170 2170 HOH HOH A . H 4 HOH 171 2171 2171 HOH HOH A . H 4 HOH 172 2172 2172 HOH HOH A . H 4 HOH 173 2173 2173 HOH HOH A . H 4 HOH 174 2174 2174 HOH HOH A . H 4 HOH 175 2175 2175 HOH HOH A . H 4 HOH 176 2176 2176 HOH HOH A . H 4 HOH 177 2177 2177 HOH HOH A . H 4 HOH 178 2178 2178 HOH HOH A . H 4 HOH 179 2179 2179 HOH HOH A . H 4 HOH 180 2180 2180 HOH HOH A . H 4 HOH 181 2181 2181 HOH HOH A . H 4 HOH 182 2182 2182 HOH HOH A . H 4 HOH 183 2183 2183 HOH HOH A . H 4 HOH 184 2184 2184 HOH HOH A . H 4 HOH 185 2185 2185 HOH HOH A . H 4 HOH 186 2186 2186 HOH HOH A . H 4 HOH 187 2187 2187 HOH HOH A . H 4 HOH 188 2188 2188 HOH HOH A . H 4 HOH 189 2189 2189 HOH HOH A . H 4 HOH 190 2190 2190 HOH HOH A . H 4 HOH 191 2191 2191 HOH HOH A . H 4 HOH 192 2192 2192 HOH HOH A . H 4 HOH 193 2193 2193 HOH HOH A . H 4 HOH 194 2194 2194 HOH HOH A . H 4 HOH 195 2195 2195 HOH HOH A . H 4 HOH 196 2196 2196 HOH HOH A . H 4 HOH 197 2197 2197 HOH HOH A . H 4 HOH 198 2198 2198 HOH HOH A . H 4 HOH 199 2199 2199 HOH HOH A . H 4 HOH 200 2200 2200 HOH HOH A . H 4 HOH 201 2201 2201 HOH HOH A . H 4 HOH 202 2202 2202 HOH HOH A . H 4 HOH 203 2203 2203 HOH HOH A . H 4 HOH 204 2204 2204 HOH HOH A . H 4 HOH 205 2205 2205 HOH HOH A . H 4 HOH 206 2206 2206 HOH HOH A . H 4 HOH 207 2207 2207 HOH HOH A . H 4 HOH 208 2208 2208 HOH HOH A . H 4 HOH 209 2209 2209 HOH HOH A . H 4 HOH 210 2210 2210 HOH HOH A . H 4 HOH 211 2211 2211 HOH HOH A . H 4 HOH 212 2212 2212 HOH HOH A . H 4 HOH 213 2213 2213 HOH HOH A . H 4 HOH 214 2214 2214 HOH HOH A . H 4 HOH 215 2215 2215 HOH HOH A . H 4 HOH 216 2216 2216 HOH HOH A . H 4 HOH 217 2217 2217 HOH HOH A . H 4 HOH 218 2218 2218 HOH HOH A . H 4 HOH 219 2219 2219 HOH HOH A . H 4 HOH 220 2220 2220 HOH HOH A . H 4 HOH 221 2221 2221 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MLPHARE phasing . ? 4 # _cell.entry_id 1HD2 _cell.length_a 66.607 _cell.length_b 66.607 _cell.length_c 123.327 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HD2 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # _exptl.entry_id 1HD2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.37 _exptl_crystal.density_percent_sol 63.5 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.30 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED FROM 1.6 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE BUFFER PH 5.3, 0.2 M POTASSIUM SODIUM TARTRATE, 1 MM DTT, 0.02 % (W/V) SODIUM AZIDE ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2000-09-15 _diffrn_detector.details 'TOROIDAL MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.1 1.0 2 0.9175 1.0 3 0.9169 1.0 4 0.855 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X31' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X31 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1,0.9175,0.9169,0.855 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1HD2 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 16.000 _reflns.d_resolution_high 1.500 _reflns.number_obs 45181 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.05100 _reflns.pdbx_Rsym_value 0.05100 _reflns.pdbx_netI_over_sigmaI 24.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.500 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.72 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.24600 _reflns_shell.pdbx_Rsym_value 0.24600 _reflns_shell.meanI_over_sigI_obs 7.000 _reflns_shell.pdbx_redundancy 8.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1HD2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 45181 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 16.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.1325 _refine.ls_R_factor_all 0.1332 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1645 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2256 _refine.ls_number_parameters 12850 _refine.ls_number_restraints 15197 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-2' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details 'ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY 0.037' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1HD2 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 2 _refine_analyze.occupancy_sum_hydrogen 1059.00 _refine_analyze.occupancy_sum_non_hydrogen 1424.50 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1190 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 221 _refine_hist.number_atoms_total 1425 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 16.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0281 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.075 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.075 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.043 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.058 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.103 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1HD2 _pdbx_refine.R_factor_all_no_cutoff 0.1332 _pdbx_refine.R_factor_obs_no_cutoff 0.1325 _pdbx_refine.free_R_factor_no_cutoff 0.1645 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 2256 _pdbx_refine.R_factor_all_4sig_cutoff 0.1263 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1256 _pdbx_refine.free_R_factor_4sig_cutoff 0.1569 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 2086 _pdbx_refine.number_reflns_obs_4sig_cutoff 41443 # _database_PDB_matrix.entry_id 1HD2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1HD2 _struct.title 'Human peroxiredoxin 5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HD2 _struct_keywords.pdbx_keywords 'ANTIOXIDANT ENZYME' _struct_keywords.text 'ANTIOXIDANT ENZYME, PEROXIREDOXIN, THIOREDOXIN PEROXIDASE, THIOREDOXIN FOLD' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRDX5_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9UKX4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1HD2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 161 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UKX4 _struct_ref_seq.db_align_beg 54 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 214 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 161 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3310 ? 1 MORE -8 ? 1 'SSA (A^2)' 13260 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 66.6070000000 -1.0000000000 0.0000000000 0.0000000000 66.6070000000 0.0000000000 0.0000000000 -1.0000000000 61.6635000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 LEU A 25 ? PHE A 29 ? LEU A 25 PHE A 29 1 ? 5 HELX_P HELX_P2 H2 THR A 44 ? ALA A 64 ? THR A 44 ALA A 64 1 ? 21 HELX_P HELX_P3 H3 ASP A 77 ? HIS A 88 ? ASP A 77 HIS A 88 1 ? 12 HELX_P HELX_P4 H4 GLY A 102 ? ASP A 109 ? GLY A 102 ASP A 109 1 ? 8 HELX_P HELX_P5 H5 LEU A 116 ? GLY A 121 ? LEU A 116 GLY A 121 1 ? 6 HELX_P HELX_P6 H6 LEU A 153 ? LEU A 161 ? LEU A 153 LEU A 161 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 1 ? S2 ? 1 ? S5 ? 1 ? S4 ? 1 ? S3 ? 1 ? S6 ? 1 ? S7 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 VAL A 12 ? GLU A 16 ? VAL A 12 GLU A 16 S2 1 ASN A 21 ? ASN A 24 ? ASN A 21 ASN A 24 S5 1 ARG A 95 ? ASP A 99 ? ARG A 95 ASP A 99 S4 1 VAL A 69 ? SER A 74 ? VAL A 69 SER A 74 S3 1 LYS A 32 ? VAL A 39 ? LYS A 32 VAL A 39 S6 1 ARG A 127 ? ASP A 134 ? ARG A 127 ASP A 134 S7 1 ILE A 136 ? GLU A 143 ? ILE A 136 GLU A 143 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BR 301 ? 3 'BINDING SITE FOR RESIDUE BR A 301' AC2 Software A BR 303 ? 2 'BINDING SITE FOR RESIDUE BR A 303' AC3 Software A BR 304 ? 2 'BINDING SITE FOR RESIDUE BR A 304' AC4 Software A BR 305 ? 3 'BINDING SITE FOR RESIDUE BR A 305' AC5 Software A BEZ 201 ? 11 'BINDING SITE FOR RESIDUE BEZ A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 LYS A 63 ? LYS A 63 . ? 3_555 ? 2 AC1 3 LYS A 93 ? LYS A 93 . ? 3_555 ? 3 AC1 3 SER A 118 ? SER A 118 . ? 1_555 ? 4 AC2 2 GLN A 133 ? GLN A 133 . ? 3_555 ? 5 AC2 2 LEU A 149 ? LEU A 149 . ? 1_555 ? 6 AC3 2 ALA A 90 ? ALA A 90 . ? 1_555 ? 7 AC3 2 GLU A 91 ? GLU A 91 . ? 1_555 ? 8 AC4 3 GLN A 68 ? GLN A 68 . ? 3_555 ? 9 AC4 3 ASP A 113 ? ASP A 113 . ? 1_555 ? 10 AC4 3 SER A 115 ? SER A 115 . ? 1_555 ? 11 AC5 11 PRO A 40 ? PRO A 40 . ? 1_555 ? 12 AC5 11 THR A 44 ? THR A 44 . ? 1_555 ? 13 AC5 11 PRO A 45 ? PRO A 45 . ? 1_555 ? 14 AC5 11 GLY A 46 ? GLY A 46 . ? 1_555 ? 15 AC5 11 CYS A 47 ? CYS A 47 . ? 1_555 ? 16 AC5 11 LYS A 63 ? LYS A 63 . ? 3_555 ? 17 AC5 11 ALA A 64 ? ALA A 64 . ? 3_555 ? 18 AC5 11 GLY A 66 ? GLY A 66 . ? 3_555 ? 19 AC5 11 ARG A 127 ? ARG A 127 . ? 1_555 ? 20 AC5 11 THR A 147 ? THR A 147 . ? 1_555 ? 21 AC5 11 HOH H . ? HOH A 2113 . ? 3_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A TRP 84 ? ? CD1 A TRP 84 ? ? NE1 A TRP 84 ? ? 103.90 110.10 -6.20 1.00 N 2 1 CD1 A TRP 84 ? ? NE1 A TRP 84 ? ? CE2 A TRP 84 ? ? 116.97 109.00 7.97 0.90 N 3 1 NE1 A TRP 84 ? ? CE2 A TRP 84 ? ? CZ2 A TRP 84 ? ? 137.35 130.40 6.95 1.10 N 4 1 CD A ARG 86 ? ? NE A ARG 86 ? ? CZ A ARG 86 ? ? 132.80 123.60 9.20 1.40 N 5 1 NE A ARG 95 ? ? CZ A ARG 95 ? ? NH2 A ARG 95 ? ? 116.93 120.30 -3.37 0.50 N 6 1 NE A ARG 127 ? ? CZ A ARG 127 ? ? NH2 A ARG 127 ? ? 128.53 120.30 8.23 0.50 N 7 1 CA A THR 150 ? ? CB A THR 150 ? ? OG1 A THR 150 ? ? 123.11 109.00 14.11 2.10 N 8 1 C A THR 150 ? ? N A CYS 151 ? ? CA A CYS 151 ? ? 138.80 121.70 17.10 2.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 50 ? ? -123.76 -57.35 2 1 ASP A 113 ? ? -87.96 -148.01 3 1 THR A 150 ? ? -136.92 -106.99 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2057 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: KABSCH AND SANDER ; 700 ; SHEET DETERMINATION METHOD: KABSCH AND SANDER ; # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2033 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.93 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BEZ C C N N 74 BEZ O1 O N N 75 BEZ O2 O N N 76 BEZ C1 C Y N 77 BEZ C2 C Y N 78 BEZ C3 C Y N 79 BEZ C4 C Y N 80 BEZ C5 C Y N 81 BEZ C6 C Y N 82 BEZ HO2 H N N 83 BEZ H2 H N N 84 BEZ H3 H N N 85 BEZ H4 H N N 86 BEZ H5 H N N 87 BEZ H6 H N N 88 BR BR BR N N 89 CYS N N N N 90 CYS CA C N R 91 CYS C C N N 92 CYS O O N N 93 CYS CB C N N 94 CYS SG S N N 95 CYS OXT O N N 96 CYS H H N N 97 CYS H2 H N N 98 CYS HA H N N 99 CYS HB2 H N N 100 CYS HB3 H N N 101 CYS HG H N N 102 CYS HXT H N N 103 GLN N N N N 104 GLN CA C N S 105 GLN C C N N 106 GLN O O N N 107 GLN CB C N N 108 GLN CG C N N 109 GLN CD C N N 110 GLN OE1 O N N 111 GLN NE2 N N N 112 GLN OXT O N N 113 GLN H H N N 114 GLN H2 H N N 115 GLN HA H N N 116 GLN HB2 H N N 117 GLN HB3 H N N 118 GLN HG2 H N N 119 GLN HG3 H N N 120 GLN HE21 H N N 121 GLN HE22 H N N 122 GLN HXT H N N 123 GLU N N N N 124 GLU CA C N S 125 GLU C C N N 126 GLU O O N N 127 GLU CB C N N 128 GLU CG C N N 129 GLU CD C N N 130 GLU OE1 O N N 131 GLU OE2 O N N 132 GLU OXT O N N 133 GLU H H N N 134 GLU H2 H N N 135 GLU HA H N N 136 GLU HB2 H N N 137 GLU HB3 H N N 138 GLU HG2 H N N 139 GLU HG3 H N N 140 GLU HE2 H N N 141 GLU HXT H N N 142 GLY N N N N 143 GLY CA C N N 144 GLY C C N N 145 GLY O O N N 146 GLY OXT O N N 147 GLY H H N N 148 GLY H2 H N N 149 GLY HA2 H N N 150 GLY HA3 H N N 151 GLY HXT H N N 152 HIS N N N N 153 HIS CA C N S 154 HIS C C N N 155 HIS O O N N 156 HIS CB C N N 157 HIS CG C Y N 158 HIS ND1 N Y N 159 HIS CD2 C Y N 160 HIS CE1 C Y N 161 HIS NE2 N Y N 162 HIS OXT O N N 163 HIS H H N N 164 HIS H2 H N N 165 HIS HA H N N 166 HIS HB2 H N N 167 HIS HB3 H N N 168 HIS HD1 H N N 169 HIS HD2 H N N 170 HIS HE1 H N N 171 HIS HE2 H N N 172 HIS HXT H N N 173 HOH O O N N 174 HOH H1 H N N 175 HOH H2 H N N 176 ILE N N N N 177 ILE CA C N S 178 ILE C C N N 179 ILE O O N N 180 ILE CB C N S 181 ILE CG1 C N N 182 ILE CG2 C N N 183 ILE CD1 C N N 184 ILE OXT O N N 185 ILE H H N N 186 ILE H2 H N N 187 ILE HA H N N 188 ILE HB H N N 189 ILE HG12 H N N 190 ILE HG13 H N N 191 ILE HG21 H N N 192 ILE HG22 H N N 193 ILE HG23 H N N 194 ILE HD11 H N N 195 ILE HD12 H N N 196 ILE HD13 H N N 197 ILE HXT H N N 198 LEU N N N N 199 LEU CA C N S 200 LEU C C N N 201 LEU O O N N 202 LEU CB C N N 203 LEU CG C N N 204 LEU CD1 C N N 205 LEU CD2 C N N 206 LEU OXT O N N 207 LEU H H N N 208 LEU H2 H N N 209 LEU HA H N N 210 LEU HB2 H N N 211 LEU HB3 H N N 212 LEU HG H N N 213 LEU HD11 H N N 214 LEU HD12 H N N 215 LEU HD13 H N N 216 LEU HD21 H N N 217 LEU HD22 H N N 218 LEU HD23 H N N 219 LEU HXT H N N 220 LYS N N N N 221 LYS CA C N S 222 LYS C C N N 223 LYS O O N N 224 LYS CB C N N 225 LYS CG C N N 226 LYS CD C N N 227 LYS CE C N N 228 LYS NZ N N N 229 LYS OXT O N N 230 LYS H H N N 231 LYS H2 H N N 232 LYS HA H N N 233 LYS HB2 H N N 234 LYS HB3 H N N 235 LYS HG2 H N N 236 LYS HG3 H N N 237 LYS HD2 H N N 238 LYS HD3 H N N 239 LYS HE2 H N N 240 LYS HE3 H N N 241 LYS HZ1 H N N 242 LYS HZ2 H N N 243 LYS HZ3 H N N 244 LYS HXT H N N 245 MET N N N N 246 MET CA C N S 247 MET C C N N 248 MET O O N N 249 MET CB C N N 250 MET CG C N N 251 MET SD S N N 252 MET CE C N N 253 MET OXT O N N 254 MET H H N N 255 MET H2 H N N 256 MET HA H N N 257 MET HB2 H N N 258 MET HB3 H N N 259 MET HG2 H N N 260 MET HG3 H N N 261 MET HE1 H N N 262 MET HE2 H N N 263 MET HE3 H N N 264 MET HXT H N N 265 PHE N N N N 266 PHE CA C N S 267 PHE C C N N 268 PHE O O N N 269 PHE CB C N N 270 PHE CG C Y N 271 PHE CD1 C Y N 272 PHE CD2 C Y N 273 PHE CE1 C Y N 274 PHE CE2 C Y N 275 PHE CZ C Y N 276 PHE OXT O N N 277 PHE H H N N 278 PHE H2 H N N 279 PHE HA H N N 280 PHE HB2 H N N 281 PHE HB3 H N N 282 PHE HD1 H N N 283 PHE HD2 H N N 284 PHE HE1 H N N 285 PHE HE2 H N N 286 PHE HZ H N N 287 PHE HXT H N N 288 PRO N N N N 289 PRO CA C N S 290 PRO C C N N 291 PRO O O N N 292 PRO CB C N N 293 PRO CG C N N 294 PRO CD C N N 295 PRO OXT O N N 296 PRO H H N N 297 PRO HA H N N 298 PRO HB2 H N N 299 PRO HB3 H N N 300 PRO HG2 H N N 301 PRO HG3 H N N 302 PRO HD2 H N N 303 PRO HD3 H N N 304 PRO HXT H N N 305 SER N N N N 306 SER CA C N S 307 SER C C N N 308 SER O O N N 309 SER CB C N N 310 SER OG O N N 311 SER OXT O N N 312 SER H H N N 313 SER H2 H N N 314 SER HA H N N 315 SER HB2 H N N 316 SER HB3 H N N 317 SER HG H N N 318 SER HXT H N N 319 THR N N N N 320 THR CA C N S 321 THR C C N N 322 THR O O N N 323 THR CB C N R 324 THR OG1 O N N 325 THR CG2 C N N 326 THR OXT O N N 327 THR H H N N 328 THR H2 H N N 329 THR HA H N N 330 THR HB H N N 331 THR HG1 H N N 332 THR HG21 H N N 333 THR HG22 H N N 334 THR HG23 H N N 335 THR HXT H N N 336 TRP N N N N 337 TRP CA C N S 338 TRP C C N N 339 TRP O O N N 340 TRP CB C N N 341 TRP CG C Y N 342 TRP CD1 C Y N 343 TRP CD2 C Y N 344 TRP NE1 N Y N 345 TRP CE2 C Y N 346 TRP CE3 C Y N 347 TRP CZ2 C Y N 348 TRP CZ3 C Y N 349 TRP CH2 C Y N 350 TRP OXT O N N 351 TRP H H N N 352 TRP H2 H N N 353 TRP HA H N N 354 TRP HB2 H N N 355 TRP HB3 H N N 356 TRP HD1 H N N 357 TRP HE1 H N N 358 TRP HE3 H N N 359 TRP HZ2 H N N 360 TRP HZ3 H N N 361 TRP HH2 H N N 362 TRP HXT H N N 363 VAL N N N N 364 VAL CA C N S 365 VAL C C N N 366 VAL O O N N 367 VAL CB C N N 368 VAL CG1 C N N 369 VAL CG2 C N N 370 VAL OXT O N N 371 VAL H H N N 372 VAL H2 H N N 373 VAL HA H N N 374 VAL HB H N N 375 VAL HG11 H N N 376 VAL HG12 H N N 377 VAL HG13 H N N 378 VAL HG21 H N N 379 VAL HG22 H N N 380 VAL HG23 H N N 381 VAL HXT H N N 382 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BEZ C O1 doub N N 70 BEZ C O2 sing N N 71 BEZ C C1 sing N N 72 BEZ O2 HO2 sing N N 73 BEZ C1 C2 doub Y N 74 BEZ C1 C6 sing Y N 75 BEZ C2 C3 sing Y N 76 BEZ C2 H2 sing N N 77 BEZ C3 C4 doub Y N 78 BEZ C3 H3 sing N N 79 BEZ C4 C5 sing Y N 80 BEZ C4 H4 sing N N 81 BEZ C5 C6 doub Y N 82 BEZ C5 H5 sing N N 83 BEZ C6 H6 sing N N 84 CYS N CA sing N N 85 CYS N H sing N N 86 CYS N H2 sing N N 87 CYS CA C sing N N 88 CYS CA CB sing N N 89 CYS CA HA sing N N 90 CYS C O doub N N 91 CYS C OXT sing N N 92 CYS CB SG sing N N 93 CYS CB HB2 sing N N 94 CYS CB HB3 sing N N 95 CYS SG HG sing N N 96 CYS OXT HXT sing N N 97 GLN N CA sing N N 98 GLN N H sing N N 99 GLN N H2 sing N N 100 GLN CA C sing N N 101 GLN CA CB sing N N 102 GLN CA HA sing N N 103 GLN C O doub N N 104 GLN C OXT sing N N 105 GLN CB CG sing N N 106 GLN CB HB2 sing N N 107 GLN CB HB3 sing N N 108 GLN CG CD sing N N 109 GLN CG HG2 sing N N 110 GLN CG HG3 sing N N 111 GLN CD OE1 doub N N 112 GLN CD NE2 sing N N 113 GLN NE2 HE21 sing N N 114 GLN NE2 HE22 sing N N 115 GLN OXT HXT sing N N 116 GLU N CA sing N N 117 GLU N H sing N N 118 GLU N H2 sing N N 119 GLU CA C sing N N 120 GLU CA CB sing N N 121 GLU CA HA sing N N 122 GLU C O doub N N 123 GLU C OXT sing N N 124 GLU CB CG sing N N 125 GLU CB HB2 sing N N 126 GLU CB HB3 sing N N 127 GLU CG CD sing N N 128 GLU CG HG2 sing N N 129 GLU CG HG3 sing N N 130 GLU CD OE1 doub N N 131 GLU CD OE2 sing N N 132 GLU OE2 HE2 sing N N 133 GLU OXT HXT sing N N 134 GLY N CA sing N N 135 GLY N H sing N N 136 GLY N H2 sing N N 137 GLY CA C sing N N 138 GLY CA HA2 sing N N 139 GLY CA HA3 sing N N 140 GLY C O doub N N 141 GLY C OXT sing N N 142 GLY OXT HXT sing N N 143 HIS N CA sing N N 144 HIS N H sing N N 145 HIS N H2 sing N N 146 HIS CA C sing N N 147 HIS CA CB sing N N 148 HIS CA HA sing N N 149 HIS C O doub N N 150 HIS C OXT sing N N 151 HIS CB CG sing N N 152 HIS CB HB2 sing N N 153 HIS CB HB3 sing N N 154 HIS CG ND1 sing Y N 155 HIS CG CD2 doub Y N 156 HIS ND1 CE1 doub Y N 157 HIS ND1 HD1 sing N N 158 HIS CD2 NE2 sing Y N 159 HIS CD2 HD2 sing N N 160 HIS CE1 NE2 sing Y N 161 HIS CE1 HE1 sing N N 162 HIS NE2 HE2 sing N N 163 HIS OXT HXT sing N N 164 HOH O H1 sing N N 165 HOH O H2 sing N N 166 ILE N CA sing N N 167 ILE N H sing N N 168 ILE N H2 sing N N 169 ILE CA C sing N N 170 ILE CA CB sing N N 171 ILE CA HA sing N N 172 ILE C O doub N N 173 ILE C OXT sing N N 174 ILE CB CG1 sing N N 175 ILE CB CG2 sing N N 176 ILE CB HB sing N N 177 ILE CG1 CD1 sing N N 178 ILE CG1 HG12 sing N N 179 ILE CG1 HG13 sing N N 180 ILE CG2 HG21 sing N N 181 ILE CG2 HG22 sing N N 182 ILE CG2 HG23 sing N N 183 ILE CD1 HD11 sing N N 184 ILE CD1 HD12 sing N N 185 ILE CD1 HD13 sing N N 186 ILE OXT HXT sing N N 187 LEU N CA sing N N 188 LEU N H sing N N 189 LEU N H2 sing N N 190 LEU CA C sing N N 191 LEU CA CB sing N N 192 LEU CA HA sing N N 193 LEU C O doub N N 194 LEU C OXT sing N N 195 LEU CB CG sing N N 196 LEU CB HB2 sing N N 197 LEU CB HB3 sing N N 198 LEU CG CD1 sing N N 199 LEU CG CD2 sing N N 200 LEU CG HG sing N N 201 LEU CD1 HD11 sing N N 202 LEU CD1 HD12 sing N N 203 LEU CD1 HD13 sing N N 204 LEU CD2 HD21 sing N N 205 LEU CD2 HD22 sing N N 206 LEU CD2 HD23 sing N N 207 LEU OXT HXT sing N N 208 LYS N CA sing N N 209 LYS N H sing N N 210 LYS N H2 sing N N 211 LYS CA C sing N N 212 LYS CA CB sing N N 213 LYS CA HA sing N N 214 LYS C O doub N N 215 LYS C OXT sing N N 216 LYS CB CG sing N N 217 LYS CB HB2 sing N N 218 LYS CB HB3 sing N N 219 LYS CG CD sing N N 220 LYS CG HG2 sing N N 221 LYS CG HG3 sing N N 222 LYS CD CE sing N N 223 LYS CD HD2 sing N N 224 LYS CD HD3 sing N N 225 LYS CE NZ sing N N 226 LYS CE HE2 sing N N 227 LYS CE HE3 sing N N 228 LYS NZ HZ1 sing N N 229 LYS NZ HZ2 sing N N 230 LYS NZ HZ3 sing N N 231 LYS OXT HXT sing N N 232 MET N CA sing N N 233 MET N H sing N N 234 MET N H2 sing N N 235 MET CA C sing N N 236 MET CA CB sing N N 237 MET CA HA sing N N 238 MET C O doub N N 239 MET C OXT sing N N 240 MET CB CG sing N N 241 MET CB HB2 sing N N 242 MET CB HB3 sing N N 243 MET CG SD sing N N 244 MET CG HG2 sing N N 245 MET CG HG3 sing N N 246 MET SD CE sing N N 247 MET CE HE1 sing N N 248 MET CE HE2 sing N N 249 MET CE HE3 sing N N 250 MET OXT HXT sing N N 251 PHE N CA sing N N 252 PHE N H sing N N 253 PHE N H2 sing N N 254 PHE CA C sing N N 255 PHE CA CB sing N N 256 PHE CA HA sing N N 257 PHE C O doub N N 258 PHE C OXT sing N N 259 PHE CB CG sing N N 260 PHE CB HB2 sing N N 261 PHE CB HB3 sing N N 262 PHE CG CD1 doub Y N 263 PHE CG CD2 sing Y N 264 PHE CD1 CE1 sing Y N 265 PHE CD1 HD1 sing N N 266 PHE CD2 CE2 doub Y N 267 PHE CD2 HD2 sing N N 268 PHE CE1 CZ doub Y N 269 PHE CE1 HE1 sing N N 270 PHE CE2 CZ sing Y N 271 PHE CE2 HE2 sing N N 272 PHE CZ HZ sing N N 273 PHE OXT HXT sing N N 274 PRO N CA sing N N 275 PRO N CD sing N N 276 PRO N H sing N N 277 PRO CA C sing N N 278 PRO CA CB sing N N 279 PRO CA HA sing N N 280 PRO C O doub N N 281 PRO C OXT sing N N 282 PRO CB CG sing N N 283 PRO CB HB2 sing N N 284 PRO CB HB3 sing N N 285 PRO CG CD sing N N 286 PRO CG HG2 sing N N 287 PRO CG HG3 sing N N 288 PRO CD HD2 sing N N 289 PRO CD HD3 sing N N 290 PRO OXT HXT sing N N 291 SER N CA sing N N 292 SER N H sing N N 293 SER N H2 sing N N 294 SER CA C sing N N 295 SER CA CB sing N N 296 SER CA HA sing N N 297 SER C O doub N N 298 SER C OXT sing N N 299 SER CB OG sing N N 300 SER CB HB2 sing N N 301 SER CB HB3 sing N N 302 SER OG HG sing N N 303 SER OXT HXT sing N N 304 THR N CA sing N N 305 THR N H sing N N 306 THR N H2 sing N N 307 THR CA C sing N N 308 THR CA CB sing N N 309 THR CA HA sing N N 310 THR C O doub N N 311 THR C OXT sing N N 312 THR CB OG1 sing N N 313 THR CB CG2 sing N N 314 THR CB HB sing N N 315 THR OG1 HG1 sing N N 316 THR CG2 HG21 sing N N 317 THR CG2 HG22 sing N N 318 THR CG2 HG23 sing N N 319 THR OXT HXT sing N N 320 TRP N CA sing N N 321 TRP N H sing N N 322 TRP N H2 sing N N 323 TRP CA C sing N N 324 TRP CA CB sing N N 325 TRP CA HA sing N N 326 TRP C O doub N N 327 TRP C OXT sing N N 328 TRP CB CG sing N N 329 TRP CB HB2 sing N N 330 TRP CB HB3 sing N N 331 TRP CG CD1 doub Y N 332 TRP CG CD2 sing Y N 333 TRP CD1 NE1 sing Y N 334 TRP CD1 HD1 sing N N 335 TRP CD2 CE2 doub Y N 336 TRP CD2 CE3 sing Y N 337 TRP NE1 CE2 sing Y N 338 TRP NE1 HE1 sing N N 339 TRP CE2 CZ2 sing Y N 340 TRP CE3 CZ3 doub Y N 341 TRP CE3 HE3 sing N N 342 TRP CZ2 CH2 doub Y N 343 TRP CZ2 HZ2 sing N N 344 TRP CZ3 CH2 sing Y N 345 TRP CZ3 HZ3 sing N N 346 TRP CH2 HH2 sing N N 347 TRP OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # _atom_sites.entry_id 1HD2 _atom_sites.fract_transf_matrix[1][1] 0.015013 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015013 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008108 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O S # loop_