data_1HHU # _entry.id 1HHU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1HHU pdb_00001hhu 10.2210/pdb1hhu/pdb PDBE EBI-5732 ? ? WWPDB D_1290005732 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1GO6 unspecified 'CRYSTAL STRUCTURE OF BALHIMYCIN COMPLEXED WITH THE PEPTIDE LYS-DAL-DAL' PDB 1HHY unspecified 'CRYSTAL STRUCURE OF DEGLUCOBALHIMYCIN COMPLEXED WITH DAL-DAL' PDB 1HHZ unspecified 'CRYSTAL STRUCTURE OF DEGLUCOBALHIMYCIN COPMLEXED WITH CELL WALL PENTAPEPTIDE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HHU _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-12-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lehmann, C.' 1 'Bunkoczi, G.' 2 'Sheldrick, G.M.' 3 'Vertessy, L.' 4 # _citation.id primary _citation.title 'Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 318 _citation.page_first 723 _citation.page_last ? _citation.year 2002 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12054818 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)00146-8' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lehmann, C.' 1 ? primary 'Bunkoczi, G.' 2 ? primary 'Vertesy, L.' 3 ? primary 'Sheldrick, G.M.' 4 ? # _cell.entry_id 1HHU _cell.length_a 22.705 _cell.length_b 27.986 _cell.length_c 44.490 _cell.angle_alpha 90.00 _cell.angle_beta 93.18 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HHU _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat BALHIMYCIN 1149.977 4 ? ? ? ? 2 non-polymer man beta-D-glucopyranose 180.156 4 ? ? ? ? 3 non-polymer man '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' 177.198 4 ? ? ? ? 4 non-polymer syn D-ALANINE 89.093 8 ? ? ? ? 5 non-polymer syn 'CITRIC ACID' 192.124 5 ? ? ? ? 6 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 2 ? ? ? ? 7 water nat water 18.015 125 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(MLU)(OMZ)N(GHP)(GHP)(OMY)(3FG)' _entity_poly.pdbx_seq_one_letter_code_can XXNGGYX _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MLU n 1 2 OMZ n 1 3 ASN n 1 4 GHP n 1 5 GHP n 1 6 OMY n 1 7 3FG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'AMYCOLATOPSIS SP.' _entity_src_nat.pdbx_ncbi_taxonomy_id 37632 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00709 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00709 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1HHU A 1 ? 7 ? NOR00709 1 ? 7 ? 1 7 2 1 1HHU B 1 ? 7 ? NOR00709 1 ? 7 ? 1 7 3 1 1HHU C 1 ? 7 ? NOR00709 1 ? 7 ? 1 7 4 1 1HHU D 1 ? 7 ? NOR00709 1 ? 7 ? 1 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3FG 'L-peptide linking' . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ? 'C8 H9 N O4' 183.161 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DVC 'L-saccharide, alpha linking' . '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' ? 'C7 H15 N O4' 177.198 GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162 HOH non-polymer . WATER ? 'H2 O' 18.015 MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 OMY 'L-peptide linking' n '(betaR)-3-chloro-beta-hydroxy-L-tyrosine' ? 'C9 H10 Cl N O4' 231.633 OMZ 'D-peptide linking' . '(betaR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE' ? 'C9 H10 Cl N O4' 231.633 # _exptl.entry_id 1HHU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 22.4 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1M CIT, PH =7, 25% MPD' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9076 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength 0.9076 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1HHU _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 27.990 _reflns.d_resolution_high 0.890 _reflns.number_obs 42306 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.01690 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 38.7600 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.660 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.89 _reflns_shell.d_res_low 1.00 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.03390 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 24.670 _reflns_shell.pdbx_redundancy 3.35 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1HHU _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 82360 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.99 _refine.ls_d_res_high 0.89 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.0835 _refine.ls_R_factor_all 0.0837 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1004 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 4260 _refine.ls_number_parameters 6200 _refine.ls_number_restraints 9467 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'METHOD USED: MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'FRIDEL OPPOSITES DURING REFINEMENT NOT MERGED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'DIRECT METHODS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details SHELLS _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1HHU _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 28 _refine_analyze.occupancy_sum_hydrogen 354.50 _refine_analyze.occupancy_sum_non_hydrogen 630.50 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 320 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 210 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 655 _refine_hist.d_res_high 0.89 _refine_hist.d_res_low 27.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.027 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.042 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.107 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.128 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.082 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.065 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1HHU _pdbx_refine.R_factor_all_no_cutoff 0.0837 _pdbx_refine.R_factor_obs_no_cutoff 0.0835 _pdbx_refine.free_R_factor_no_cutoff 0.1004 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.2 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 4260 _pdbx_refine.R_factor_all_4sig_cutoff 0.0824 _pdbx_refine.R_factor_obs_4sig_cutoff 0.0822 _pdbx_refine.free_R_factor_4sig_cutoff 0.0985 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.2 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 4152 _pdbx_refine.number_reflns_obs_4sig_cutoff 80430 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? -0.963320 -0.049230 0.263810 -0.008840 0.988320 0.152140 -0.268220 0.144230 -0.952500 12.62952 -4.70875 64.23579 2 given ? 0.994970 -0.004290 0.100070 -0.004010 -0.999990 -0.002980 0.100080 0.002570 -0.994980 -3.24436 63.42650 65.46110 3 given ? -0.984800 -0.037620 0.169560 0.011400 -0.988150 -0.153070 0.173310 -0.148820 0.973560 15.83975 68.02299 2.86101 # _struct.entry_id 1HHU _struct.title 'Balhimycin in complex with D-Ala-D-Ala' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HHU _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'ANTIBIOTIC, GLYCOPEPTIDE, CELL WALL PEPTIDES' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 6 ? N N N 2 ? O N N 3 ? P N N 4 ? Q N N 4 ? R N N 5 ? S N N 6 ? T N N 2 ? U N N 3 ? V N N 4 ? W N N 4 ? X N N 2 ? Y N N 3 ? Z N N 4 ? AA N N 4 ? BA N N 7 ? CA N N 7 ? DA N N 7 ? EA N N 7 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MLU 1 C ? ? ? 1_555 A OMZ 2 N ? ? A MLU 1 A OMZ 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A OMZ 2 C ? ? ? 1_555 A ASN 3 N ? ? A OMZ 2 A ASN 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale none ? A OMZ 2 OH ? ? ? 1_555 A GHP 4 C3 ? ? A OMZ 2 A GHP 4 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale4 covale both ? A ASN 3 C ? ? ? 1_555 A GHP 4 N ? ? A ASN 3 A GHP 4 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale5 covale both ? A GHP 4 C ? ? ? 1_555 A GHP 5 N ? ? A GHP 4 A GHP 5 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale none ? A GHP 4 C5 ? ? ? 1_555 A OMY 6 OCZ ? ? A GHP 4 A OMY 6 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale7 covale one ? A GHP 4 O4 ? ? ? 1_555 E BGC . C1 ? ? A GHP 4 A BGC 8 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale8 covale both ? A GHP 5 C ? ? ? 1_555 A OMY 6 N ? ? A GHP 5 A OMY 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale one ? A GHP 5 C5 ? ? ? 1_555 A 3FG 7 CG1 ? ? A GHP 5 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.502 ? ? covale10 covale both ? A OMY 6 C ? ? ? 1_555 A 3FG 7 N ? ? A OMY 6 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale11 covale one ? A OMY 6 ODE ? ? ? 1_555 F DVC . C1 ? ? A OMY 6 A DVC 9 1_555 ? ? ? ? ? ? ? 1.417 ? ? covale12 covale both ? G DAL . C ? ? ? 1_555 H DAL . N ? ? A DAL 11 A DAL 12 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale13 covale both ? B MLU 1 C ? ? ? 1_555 B OMZ 2 N ? ? B MLU 1 B OMZ 2 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale14 covale both ? B OMZ 2 C ? ? ? 1_555 B ASN 3 N ? ? B OMZ 2 B ASN 3 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale15 covale none ? B OMZ 2 OH ? ? ? 1_555 B GHP 4 C3 ? ? B OMZ 2 B GHP 4 1_555 ? ? ? ? ? ? ? 1.392 ? ? covale16 covale both ? B ASN 3 C ? ? ? 1_555 B GHP 4 N ? ? B ASN 3 B GHP 4 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale17 covale both ? B GHP 4 C ? ? ? 1_555 B GHP 5 N ? ? B GHP 4 B GHP 5 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale18 covale none ? B GHP 4 C5 ? ? ? 1_555 B OMY 6 OCZ ? ? B GHP 4 B OMY 6 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale19 covale one ? B GHP 4 O4 ? ? ? 1_555 N BGC . C1 ? ? B GHP 4 B BGC 8 1_555 ? ? ? ? ? ? ? 1.409 ? ? covale20 covale both ? B GHP 5 C ? ? ? 1_555 B OMY 6 N ? ? B GHP 5 B OMY 6 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale21 covale one ? B GHP 5 C5 ? ? ? 1_555 B 3FG 7 CG1 ? ? B GHP 5 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.497 ? ? covale22 covale both ? B OMY 6 C ? ? ? 1_555 B 3FG 7 N ? ? B OMY 6 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale23 covale one ? B OMY 6 ODE ? ? ? 1_555 O DVC . C1 ? ? B OMY 6 B DVC 9 1_555 ? ? ? ? ? ? ? 1.421 ? ? covale24 covale both ? P DAL . C ? ? ? 1_555 Q DAL . N ? ? B DAL 11 B DAL 12 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale25 covale both ? C MLU 1 C ? ? ? 1_555 C OMZ 2 N ? ? C MLU 1 C OMZ 2 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale26 covale both ? C OMZ 2 C ? ? ? 1_555 C ASN 3 N ? ? C OMZ 2 C ASN 3 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale27 covale none ? C OMZ 2 OH ? ? ? 1_555 C GHP 4 C3 ? ? C OMZ 2 C GHP 4 1_555 ? ? ? ? ? ? ? 1.369 ? ? covale28 covale both ? C ASN 3 C ? ? ? 1_555 C GHP 4 N ? ? C ASN 3 C GHP 4 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale29 covale both ? C GHP 4 C ? ? ? 1_555 C GHP 5 N ? ? C GHP 4 C GHP 5 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale30 covale none ? C GHP 4 C5 ? ? ? 1_555 C OMY 6 OCZ ? ? C GHP 4 C OMY 6 1_555 ? ? ? ? ? ? ? 1.374 ? ? covale31 covale one ? C GHP 4 O4 ? ? ? 1_555 T BGC . C1 ? ? C GHP 4 C BGC 8 1_555 ? ? ? ? ? ? ? 1.416 ? ? covale32 covale both ? C GHP 5 C ? ? ? 1_555 C OMY 6 N ? ? C GHP 5 C OMY 6 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale33 covale one ? C GHP 5 C5 ? ? ? 1_555 C 3FG 7 CG1 ? ? C GHP 5 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.498 ? ? covale34 covale both ? C OMY 6 C ? ? ? 1_555 C 3FG 7 N ? ? C OMY 6 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale35 covale one ? C OMY 6 ODE ? ? ? 1_555 U DVC . C1 ? ? C OMY 6 C DVC 9 1_555 ? ? ? ? ? ? ? 1.418 ? ? covale36 covale both ? V DAL . C ? ? ? 1_555 W DAL . N ? ? C DAL 11 C DAL 12 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale37 covale both ? D MLU 1 C ? ? ? 1_555 D OMZ 2 N ? ? D MLU 1 D OMZ 2 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale38 covale both ? D OMZ 2 C ? ? ? 1_555 D ASN 3 N ? ? D OMZ 2 D ASN 3 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale39 covale none ? D OMZ 2 OH ? ? ? 1_555 D GHP 4 C3 ? ? D OMZ 2 D GHP 4 1_555 ? ? ? ? ? ? ? 1.386 ? ? covale40 covale both ? D ASN 3 C ? ? ? 1_555 D GHP 4 N ? ? D ASN 3 D GHP 4 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale41 covale both ? D GHP 4 C ? ? ? 1_555 D GHP 5 N ? ? D GHP 4 D GHP 5 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale42 covale none ? D GHP 4 C5 ? ? ? 1_555 D OMY 6 OCZ ? ? D GHP 4 D OMY 6 1_555 ? ? ? ? ? ? ? 1.382 ? ? covale43 covale one ? D GHP 4 O4 ? ? ? 1_555 X BGC . C1 ? ? D GHP 4 D BGC 8 1_555 ? ? ? ? ? ? ? 1.418 ? ? covale44 covale both ? D GHP 5 C ? ? ? 1_555 D OMY 6 N ? ? D GHP 5 D OMY 6 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale45 covale one ? D GHP 5 C5 ? ? ? 1_555 D 3FG 7 CG1 ? ? D GHP 5 D 3FG 7 1_555 ? ? ? ? ? ? ? 1.492 ? ? covale46 covale both ? D OMY 6 C ? ? ? 1_555 D 3FG 7 N ? ? D OMY 6 D 3FG 7 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale47 covale one ? D OMY 6 ODE ? ? ? 1_555 Y DVC . C1 ? ? D OMY 6 D DVC 9 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale48 covale both ? Z DAL . C ? ? ? 1_555 AA DAL . N ? ? D DAL 11 D DAL 12 1_555 ? ? ? ? ? ? ? 1.318 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GHP 5 A . ? GHP 5 A OMY 6 A ? OMY 6 A 1 -0.56 2 GHP 5 B . ? GHP 5 B OMY 6 B ? OMY 6 B 1 -2.07 3 GHP 5 C . ? GHP 5 C OMY 6 C ? OMY 6 C 1 2.22 4 GHP 5 D . ? GHP 5 D OMY 6 D ? OMY 6 D 1 0.79 # _database_PDB_matrix.entry_id 1HHU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1HHU _atom_sites.fract_transf_matrix[1][1] 0.044043 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002447 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035732 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022512 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O # loop_ _database_PDB_caveat.text 'MPD B 1016 HAS WRONG CHIRALITY AT ATOM C4' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MLU 1 1 1 MLU MLU A . n A 1 2 OMZ 2 2 2 OMZ OMZ A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 GHP 4 4 4 GHP GHP A . n A 1 5 GHP 5 5 5 GHP GHP A . n A 1 6 OMY 6 6 6 OMY OMY A . n A 1 7 3FG 7 7 7 3FG 3FG A . n B 1 1 MLU 1 1 1 MLU MLU B . n B 1 2 OMZ 2 2 2 OMZ OMZ B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 GHP 4 4 4 GHP GHP B . n B 1 5 GHP 5 5 5 GHP GHP B . n B 1 6 OMY 6 6 6 OMY OMY B . n B 1 7 3FG 7 7 7 3FG 3FG B . n C 1 1 MLU 1 1 1 MLU MLU C . n C 1 2 OMZ 2 2 2 OMZ OMZ C . n C 1 3 ASN 3 3 3 ASN ASN C . n C 1 4 GHP 4 4 4 GHP GHP C . n C 1 5 GHP 5 5 5 GHP GHP C . n C 1 6 OMY 6 6 6 OMY OMY C . n C 1 7 3FG 7 7 7 3FG 3FG C . n D 1 1 MLU 1 1 1 MLU MLU D . n D 1 2 OMZ 2 2 2 OMZ OMZ D . n D 1 3 ASN 3 3 3 ASN ASN D . n D 1 4 GHP 4 4 4 GHP GHP D . n D 1 5 GHP 5 5 5 GHP GHP D . n D 1 6 OMY 6 6 6 OMY OMY D . n D 1 7 3FG 7 7 7 3FG 3FG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BGC 1 8 8 BGC BGC A . F 3 DVC 1 9 9 DVC DVC A . G 4 DAL 1 11 11 DAL DAL A . H 4 DAL 1 12 12 DAL DAL A . I 5 CIT 1 1015 1015 CIT CIT A . J 5 CIT 1 1016 1016 CIT CIT A . K 5 CIT 1 1017 1017 CIT CIT A . L 5 CIT 1 1018 1018 CIT CIT A . M 6 MPD 1 1019 1019 MPD MPD A . N 2 BGC 1 8 8 BGC BGC B . O 3 DVC 1 9 9 DVC DVC B . P 4 DAL 1 11 11 DAL DAL B . Q 4 DAL 1 12 12 DAL DAL B . R 5 CIT 1 1015 1015 CIT CIT B . S 6 MPD 1 1016 1016 MPD MPD B . T 2 BGC 1 8 8 BGC BGC C . U 3 DVC 1 9 9 DVC DVC C . V 4 DAL 1 11 11 DAL DAL C . W 4 DAL 1 12 12 DAL DAL C . X 2 BGC 1 8 8 BGC BGC D . Y 3 DVC 1 9 9 DVC DVC D . Z 4 DAL 1 11 11 DAL DAL D . AA 4 DAL 1 12 12 DAL DAL D . BA 7 HOH 1 2001 2001 HOH HOH A . BA 7 HOH 2 2002 2002 HOH HOH A . BA 7 HOH 3 2003 2003 HOH HOH A . BA 7 HOH 4 2004 2004 HOH HOH A . BA 7 HOH 5 2005 2005 HOH HOH A . BA 7 HOH 6 2006 2006 HOH HOH A . BA 7 HOH 7 2007 2007 HOH HOH A . BA 7 HOH 8 2008 2008 HOH HOH A . BA 7 HOH 9 2009 2009 HOH HOH A . BA 7 HOH 10 2010 2010 HOH HOH A . BA 7 HOH 11 2011 2011 HOH HOH A . BA 7 HOH 12 2012 2012 HOH HOH A . BA 7 HOH 13 2013 2013 HOH HOH A . BA 7 HOH 14 2014 2014 HOH HOH A . BA 7 HOH 15 2015 2015 HOH HOH A . BA 7 HOH 16 2016 2016 HOH HOH A . BA 7 HOH 17 2017 2017 HOH HOH A . BA 7 HOH 18 2018 2018 HOH HOH A . BA 7 HOH 19 2019 2019 HOH HOH A . BA 7 HOH 20 2020 2020 HOH HOH A . BA 7 HOH 21 2021 2021 HOH HOH A . BA 7 HOH 22 2022 2022 HOH HOH A . BA 7 HOH 23 2023 2023 HOH HOH A . BA 7 HOH 24 2024 2024 HOH HOH A . BA 7 HOH 25 2025 2025 HOH HOH A . BA 7 HOH 26 2026 2026 HOH HOH A . BA 7 HOH 27 2027 2027 HOH HOH A . BA 7 HOH 28 2028 2028 HOH HOH A . BA 7 HOH 29 2029 2029 HOH HOH A . BA 7 HOH 30 2030 2030 HOH HOH A . BA 7 HOH 31 2031 2031 HOH HOH A . BA 7 HOH 32 2032 2032 HOH HOH A . BA 7 HOH 33 2033 2033 HOH HOH A . BA 7 HOH 34 2034 2034 HOH HOH A . BA 7 HOH 35 2035 2035 HOH HOH A . BA 7 HOH 36 2036 2036 HOH HOH A . BA 7 HOH 37 2037 2037 HOH HOH A . BA 7 HOH 38 2038 2038 HOH HOH A . BA 7 HOH 39 2039 2039 HOH HOH A . BA 7 HOH 40 2040 2040 HOH HOH A . BA 7 HOH 41 2041 2041 HOH HOH A . BA 7 HOH 42 2042 2042 HOH HOH A . BA 7 HOH 43 2043 2043 HOH HOH A . BA 7 HOH 44 2044 2044 HOH HOH A . BA 7 HOH 45 2045 2045 HOH HOH A . BA 7 HOH 46 2046 2046 HOH HOH A . BA 7 HOH 47 2047 2047 HOH HOH A . BA 7 HOH 48 2048 2048 HOH HOH A . CA 7 HOH 1 2001 2001 HOH HOH B . CA 7 HOH 2 2002 2002 HOH HOH B . CA 7 HOH 3 2003 2003 HOH HOH B . CA 7 HOH 4 2004 2004 HOH HOH B . CA 7 HOH 5 2005 2005 HOH HOH B . CA 7 HOH 6 2006 2006 HOH HOH B . CA 7 HOH 7 2007 2007 HOH HOH B . CA 7 HOH 8 2008 2008 HOH HOH B . CA 7 HOH 9 2009 2009 HOH HOH B . CA 7 HOH 10 2010 2010 HOH HOH B . CA 7 HOH 11 2011 2011 HOH HOH B . CA 7 HOH 12 2012 2012 HOH HOH B . CA 7 HOH 13 2013 2013 HOH HOH B . CA 7 HOH 14 2014 2014 HOH HOH B . CA 7 HOH 15 2015 2015 HOH HOH B . CA 7 HOH 16 2016 2016 HOH HOH B . CA 7 HOH 17 2017 2017 HOH HOH B . CA 7 HOH 18 2018 2018 HOH HOH B . CA 7 HOH 19 2019 2019 HOH HOH B . CA 7 HOH 20 2020 2020 HOH HOH B . CA 7 HOH 21 2021 2021 HOH HOH B . CA 7 HOH 22 2022 2022 HOH HOH B . CA 7 HOH 23 2023 2023 HOH HOH B . CA 7 HOH 24 2024 2024 HOH HOH B . CA 7 HOH 25 2025 2025 HOH HOH B . CA 7 HOH 26 2026 2026 HOH HOH B . CA 7 HOH 27 2027 2027 HOH HOH B . CA 7 HOH 28 2028 2028 HOH HOH B . CA 7 HOH 29 2029 2029 HOH HOH B . CA 7 HOH 30 2030 2030 HOH HOH B . CA 7 HOH 31 2031 2031 HOH HOH B . CA 7 HOH 32 2032 2032 HOH HOH B . CA 7 HOH 33 2033 2033 HOH HOH B . CA 7 HOH 34 2034 2034 HOH HOH B . DA 7 HOH 1 2001 2001 HOH HOH C . DA 7 HOH 2 2002 2002 HOH HOH C . DA 7 HOH 3 2003 2003 HOH HOH C . DA 7 HOH 4 2004 2004 HOH HOH C . DA 7 HOH 5 2005 2005 HOH HOH C . DA 7 HOH 6 2006 2006 HOH HOH C . DA 7 HOH 7 2007 2007 HOH HOH C . DA 7 HOH 8 2008 2008 HOH HOH C . DA 7 HOH 9 2009 2009 HOH HOH C . DA 7 HOH 10 2010 2010 HOH HOH C . DA 7 HOH 11 2011 2011 HOH HOH C . DA 7 HOH 12 2012 2012 HOH HOH C . DA 7 HOH 13 2013 2013 HOH HOH C . DA 7 HOH 14 2014 2014 HOH HOH C . DA 7 HOH 15 2015 2015 HOH HOH C . DA 7 HOH 16 2016 2016 HOH HOH C . DA 7 HOH 17 2017 2017 HOH HOH C . DA 7 HOH 18 2018 2018 HOH HOH C . DA 7 HOH 19 2019 2019 HOH HOH C . DA 7 HOH 20 2020 2020 HOH HOH C . DA 7 HOH 21 2021 2021 HOH HOH C . DA 7 HOH 22 2022 2022 HOH HOH C . EA 7 HOH 1 2001 2001 HOH HOH D . EA 7 HOH 2 2002 2002 HOH HOH D . EA 7 HOH 3 2003 2003 HOH HOH D . EA 7 HOH 4 2004 2004 HOH HOH D . EA 7 HOH 5 2005 2005 HOH HOH D . EA 7 HOH 6 2006 2006 HOH HOH D . EA 7 HOH 7 2007 2007 HOH HOH D . EA 7 HOH 8 2008 2008 HOH HOH D . EA 7 HOH 9 2009 2009 HOH HOH D . EA 7 HOH 10 2010 2010 HOH HOH D . EA 7 HOH 11 2011 2011 HOH HOH D . EA 7 HOH 12 2012 2012 HOH HOH D . EA 7 HOH 13 2013 2013 HOH HOH D . EA 7 HOH 14 2014 2014 HOH HOH D . EA 7 HOH 15 2015 2015 HOH HOH D . EA 7 HOH 16 2016 2016 HOH HOH D . EA 7 HOH 17 2017 2017 HOH HOH D . EA 7 HOH 18 2018 2018 HOH HOH D . EA 7 HOH 19 2019 2019 HOH HOH D . EA 7 HOH 20 2020 2020 HOH HOH D . EA 7 HOH 21 2021 2021 HOH HOH D . # _pdbx_molecule_features.prd_id PRD_000484 _pdbx_molecule_features.name Balhimycin _pdbx_molecule_features.type Glycopeptide _pdbx_molecule_features.class 'Antibiotic, Antimicrobial' _pdbx_molecule_features.details ;BALHIMYCIN IS A TRICYCLIC HEPTAPEPTIDE GLYCOSYLATED BY D-GLUCOSE (RESIDUE 8) ON RESIDUE 4 AND BY 4-OXO-VANCOSAMINE (RESIDUE 9) ON RESIDUE 6. ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000484 A 1 PRD_000484 E 1 PRD_000484 F 2 PRD_000484 B 2 PRD_000484 N 2 PRD_000484 O 3 PRD_000484 C 3 PRD_000484 T 3 PRD_000484 U 4 PRD_000484 D 4 PRD_000484 X 4 PRD_000484 Y # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A OMY 6 A OMY 6 ? TYR ? 2 B OMY 6 B OMY 6 ? TYR ? 3 C OMY 6 C OMY 6 ? TYR ? 4 D OMY 6 D OMY 6 ? TYR ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E,F,G,H,I,J,K,L,M,X,Y,Z,AA,BA,EA 2 1 B,C,N,O,P,Q,R,S,T,U,V,W,CA,DA # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1840 ? 1 MORE -10.4 ? 1 'SSA (A^2)' 2470 ? 2 'ABSA (A^2)' 1700 ? 2 MORE -10.6 ? 2 'SSA (A^2)' 2350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-07-25 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2013-02-06 6 'Structure model' 1 5 2013-03-06 7 'Structure model' 2 0 2019-04-24 8 'Structure model' 2 1 2019-07-10 9 'Structure model' 2 2 2019-07-24 10 'Structure model' 3 0 2020-07-29 11 'Structure model' 4 0 2023-11-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 10 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 2 'Structure model' 'Version format compliance' 6 3 'Structure model' 'Atomic model' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Non-polymer description' 9 3 'Structure model' Other 10 4 'Structure model' Other 11 5 'Structure model' 'Atomic model' 12 6 'Structure model' Other 13 7 'Structure model' 'Data collection' 14 7 'Structure model' 'Derived calculations' 15 7 'Structure model' Other 16 7 'Structure model' 'Polymer sequence' 17 8 'Structure model' 'Data collection' 18 9 'Structure model' 'Data collection' 19 10 'Structure model' Advisory 20 10 'Structure model' 'Atomic model' 21 10 'Structure model' 'Data collection' 22 10 'Structure model' 'Derived calculations' 23 10 'Structure model' Other 24 10 'Structure model' 'Structure summary' 25 11 'Structure model' 'Atomic model' 26 11 'Structure model' 'Data collection' 27 11 'Structure model' 'Database references' 28 11 'Structure model' 'Derived calculations' 29 11 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 7 'Structure model' diffrn_source 2 7 'Structure model' entity_poly 3 7 'Structure model' pdbx_database_proc 4 7 'Structure model' pdbx_database_status 5 7 'Structure model' pdbx_seq_map_depositor_info 6 7 'Structure model' struct_conn 7 8 'Structure model' diffrn_source 8 9 'Structure model' diffrn_source 9 10 'Structure model' atom_site 10 10 'Structure model' chem_comp 11 10 'Structure model' database_PDB_caveat 12 10 'Structure model' entity 13 10 'Structure model' pdbx_chem_comp_identifier 14 10 'Structure model' pdbx_database_status 15 10 'Structure model' pdbx_entity_nonpoly 16 10 'Structure model' struct_conn 17 10 'Structure model' struct_site 18 10 'Structure model' struct_site_gen 19 11 'Structure model' atom_site 20 11 'Structure model' chem_comp 21 11 'Structure model' chem_comp_atom 22 11 'Structure model' chem_comp_bond 23 11 'Structure model' database_2 24 11 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 7 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 7 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 3 7 'Structure model' '_pdbx_database_status.recvd_author_approval' 4 7 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code' 5 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 8 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 7 9 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 8 10 'Structure model' '_atom_site.B_iso_or_equiv' 9 10 'Structure model' '_atom_site.Cartn_x' 10 10 'Structure model' '_atom_site.Cartn_y' 11 10 'Structure model' '_atom_site.Cartn_z' 12 10 'Structure model' '_atom_site.auth_atom_id' 13 10 'Structure model' '_atom_site.label_atom_id' 14 10 'Structure model' '_chem_comp.name' 15 10 'Structure model' '_chem_comp.type' 16 10 'Structure model' '_entity.pdbx_description' 17 10 'Structure model' '_pdbx_database_status.status_code_sf' 18 10 'Structure model' '_pdbx_entity_nonpoly.name' 19 10 'Structure model' '_struct_conn.pdbx_dist_value' 20 10 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 10 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 10 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 10 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 10 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 10 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 10 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 10 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 11 'Structure model' '_atom_site.auth_atom_id' 29 11 'Structure model' '_atom_site.label_atom_id' 30 11 'Structure model' '_chem_comp.pdbx_synonyms' 31 11 'Structure model' '_database_2.pdbx_DOI' 32 11 'Structure model' '_database_2.pdbx_database_accession' 33 11 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHELX phasing . ? 4 # _pdbx_entry_details.entry_id 1HHU _pdbx_entry_details.compound_details ;BALHIMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS FURTHER GLYCOSYLATED BY TWO MONOSACCHARIDES: A D-GLUCOSE AND A 4-OXO-VANCOSAMINE. HERE, BALHIMYCIN IS REPRESENTED GROUPING TOGETHER THE SEQUENCE (SEQRES) AND TWO LIGANDS (HET) DVC AND BGC GROUP: 1 NAME: BALHIMYCIN CHAIN: A, B, C, D COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 7 COMPONENT_2: SUGAR RESIDUES 8 AND 9 DESCRIPTION: BALHIMYCIN IS A TRICYCLIC HEPTAPEPTIDE GLYCOSYLATED BY D-GLUCOSE (RESIDUE 8) ON RESIDUE 4 AND BY 4-OXO-VANCOSAMINE (RESIDUE 9) ON RESIDUE 6. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C4 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id MPD _pdbx_validate_chiral.auth_seq_id 1016 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2002 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance . _pdbx_distant_solvent_atoms.neighbor_ligand_distance 6.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A MPD 1019 ? C4 ? M MPD 1 C4 2 1 N 1 A MPD 1019 ? O4 ? M MPD 1 O4 3 1 N 1 A MPD 1019 ? C5 ? M MPD 1 C5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3FG N N N N 1 3FG OD1 O N N 2 3FG CD1 C Y N 3 3FG CG1 C Y N 4 3FG CZ C Y N 5 3FG CD2 C Y N 6 3FG OD2 O N N 7 3FG CG2 C Y N 8 3FG CB C Y N 9 3FG CA C N S 10 3FG C C N N 11 3FG O O N N 12 3FG OXT O N N 13 3FG H H N N 14 3FG H2 H N N 15 3FG HA H N N 16 3FG HD1 H N N 17 3FG HG1 H N N 18 3FG HZ H N N 19 3FG HD2 H N N 20 3FG HG2 H N N 21 3FG HXT H N N 22 ASN N N N N 23 ASN CA C N S 24 ASN C C N N 25 ASN O O N N 26 ASN CB C N N 27 ASN CG C N N 28 ASN OD1 O N N 29 ASN ND2 N N N 30 ASN OXT O N N 31 ASN H H N N 32 ASN H2 H N N 33 ASN HA H N N 34 ASN HB2 H N N 35 ASN HB3 H N N 36 ASN HD21 H N N 37 ASN HD22 H N N 38 ASN HXT H N N 39 BGC C2 C N R 40 BGC C3 C N S 41 BGC C4 C N S 42 BGC C5 C N R 43 BGC C6 C N N 44 BGC C1 C N R 45 BGC O1 O N N 46 BGC O2 O N N 47 BGC O3 O N N 48 BGC O4 O N N 49 BGC O5 O N N 50 BGC O6 O N N 51 BGC H2 H N N 52 BGC H3 H N N 53 BGC H4 H N N 54 BGC H5 H N N 55 BGC H61 H N N 56 BGC H62 H N N 57 BGC H1 H N N 58 BGC HO1 H N N 59 BGC HO2 H N N 60 BGC HO3 H N N 61 BGC HO4 H N N 62 BGC HO6 H N N 63 CIT C1 C N N 64 CIT O1 O N N 65 CIT O2 O N N 66 CIT C2 C N N 67 CIT C3 C N N 68 CIT O7 O N N 69 CIT C4 C N N 70 CIT C5 C N N 71 CIT O3 O N N 72 CIT O4 O N N 73 CIT C6 C N N 74 CIT O5 O N N 75 CIT O6 O N N 76 CIT HO2 H N N 77 CIT H21 H N N 78 CIT H22 H N N 79 CIT HO7 H N N 80 CIT H41 H N N 81 CIT H42 H N N 82 CIT HO4 H N N 83 CIT HO6 H N N 84 DAL N N N N 85 DAL CA C N R 86 DAL CB C N N 87 DAL C C N N 88 DAL O O N N 89 DAL OXT O N N 90 DAL H H N N 91 DAL H2 H N N 92 DAL HA H N N 93 DAL HB1 H N N 94 DAL HB2 H N N 95 DAL HB3 H N N 96 DAL HXT H N N 97 DVC C1 C N R 98 DVC O1 O N N 99 DVC C2 C N N 100 DVC C3 C N S 101 DVC N3 N N N 102 DVC C4 C N N 103 DVC O4 O N N 104 DVC C5 C N S 105 DVC O5 O N N 106 DVC C6 C N N 107 DVC C3M C N N 108 DVC O41 O N N 109 DVC H1 H N N 110 DVC HO1 H N N 111 DVC H2 H N N 112 DVC H2A H N N 113 DVC HN3 H N N 114 DVC HN3A H N N 115 DVC HO4 H N N 116 DVC H5 H N N 117 DVC H6 H N N 118 DVC H6A H N N 119 DVC H6B H N N 120 DVC H3M H N N 121 DVC H3MA H N N 122 DVC H3MB H N N 123 DVC HO41 H N N 124 GHP N N N N 125 GHP CA C N R 126 GHP C C N N 127 GHP O O N N 128 GHP OXT O N N 129 GHP C1 C Y N 130 GHP C2 C Y N 131 GHP C3 C Y N 132 GHP C4 C Y N 133 GHP O4 O N N 134 GHP C5 C Y N 135 GHP C6 C Y N 136 GHP H H N N 137 GHP H2 H N N 138 GHP HA H N N 139 GHP HXT H N N 140 GHP HC2 H N N 141 GHP H3 H N N 142 GHP HO4 H N N 143 GHP H5 H N N 144 GHP H6 H N N 145 HOH O O N N 146 HOH H1 H N N 147 HOH H2 H N N 148 MLU N N N N 149 MLU CN C N N 150 MLU CA C N R 151 MLU C C N N 152 MLU O O N N 153 MLU CB C N N 154 MLU CG C N N 155 MLU CD1 C N N 156 MLU CD2 C N N 157 MLU OXT O N N 158 MLU H H N N 159 MLU HCN1 H N N 160 MLU HCN2 H N N 161 MLU HCN3 H N N 162 MLU HA H N N 163 MLU HB2 H N N 164 MLU HB3 H N N 165 MLU HXT H N N 166 MLU HG H N N 167 MLU HD11 H N N 168 MLU HD12 H N N 169 MLU HD13 H N N 170 MLU HD21 H N N 171 MLU HD22 H N N 172 MLU HD23 H N N 173 MPD C1 C N N 174 MPD C2 C N N 175 MPD O2 O N N 176 MPD CM C N N 177 MPD C3 C N N 178 MPD C4 C N S 179 MPD O4 O N N 180 MPD C5 C N N 181 MPD H11 H N N 182 MPD H12 H N N 183 MPD H13 H N N 184 MPD HO2 H N N 185 MPD HM1 H N N 186 MPD HM2 H N N 187 MPD HM3 H N N 188 MPD H31 H N N 189 MPD H32 H N N 190 MPD H4 H N N 191 MPD HO4 H N N 192 MPD H51 H N N 193 MPD H52 H N N 194 MPD H53 H N N 195 OMY N N N N 196 OMY CA C N S 197 OMY OCZ O N N 198 OMY CE2 C Y N 199 OMY CE1 C Y N 200 OMY CZ C Y N 201 OMY CG C Y N 202 OMY CD2 C Y N 203 OMY CD1 C Y N 204 OMY CB C N R 205 OMY CL CL N N 206 OMY O O N N 207 OMY C C N N 208 OMY ODE O N N 209 OMY OXT O N N 210 OMY H H N N 211 OMY H2 H N N 212 OMY HA H N N 213 OMY HCZ H N N 214 OMY HE2 H N N 215 OMY HD2 H N N 216 OMY HD1 H N N 217 OMY HB H N N 218 OMY HXT H N N 219 OMY HDE H N N 220 OMZ N N N N 221 OMZ CA C N R 222 OMZ C C N N 223 OMZ O O N N 224 OMZ OXT O N N 225 OMZ CB C N R 226 OMZ OC O N N 227 OMZ CG C Y N 228 OMZ CD1 C Y N 229 OMZ CD2 C Y N 230 OMZ CE1 C Y N 231 OMZ CL CL N N 232 OMZ CE2 C Y N 233 OMZ CZ C Y N 234 OMZ OH O N N 235 OMZ H H N N 236 OMZ H2 H N N 237 OMZ HA H N N 238 OMZ HB H N N 239 OMZ HXT H N N 240 OMZ HC H N N 241 OMZ HD1 H N N 242 OMZ HD2 H N N 243 OMZ HE2 H N N 244 OMZ HH H N N 245 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3FG N CA sing N N 1 3FG OD1 CD1 sing N N 2 3FG CD1 CG1 sing Y N 3 3FG CD1 CZ doub Y N 4 3FG CG1 CB doub Y N 5 3FG CZ CD2 sing Y N 6 3FG CD2 OD2 sing N N 7 3FG CD2 CG2 doub Y N 8 3FG CG2 CB sing Y N 9 3FG CB CA sing N N 10 3FG CA C sing N N 11 3FG C O doub N N 12 3FG C OXT sing N N 13 3FG N H sing N N 14 3FG N H2 sing N N 15 3FG CA HA sing N N 16 3FG OD1 HD1 sing N N 17 3FG CG1 HG1 sing N N 18 3FG CZ HZ sing N N 19 3FG OD2 HD2 sing N N 20 3FG CG2 HG2 sing N N 21 3FG OXT HXT sing N N 22 ASN N CA sing N N 23 ASN N H sing N N 24 ASN N H2 sing N N 25 ASN CA C sing N N 26 ASN CA CB sing N N 27 ASN CA HA sing N N 28 ASN C O doub N N 29 ASN C OXT sing N N 30 ASN CB CG sing N N 31 ASN CB HB2 sing N N 32 ASN CB HB3 sing N N 33 ASN CG OD1 doub N N 34 ASN CG ND2 sing N N 35 ASN ND2 HD21 sing N N 36 ASN ND2 HD22 sing N N 37 ASN OXT HXT sing N N 38 BGC C2 C3 sing N N 39 BGC C2 C1 sing N N 40 BGC C2 O2 sing N N 41 BGC C2 H2 sing N N 42 BGC C3 C4 sing N N 43 BGC C3 O3 sing N N 44 BGC C3 H3 sing N N 45 BGC C4 C5 sing N N 46 BGC C4 O4 sing N N 47 BGC C4 H4 sing N N 48 BGC C5 C6 sing N N 49 BGC C5 O5 sing N N 50 BGC C5 H5 sing N N 51 BGC C6 O6 sing N N 52 BGC C6 H61 sing N N 53 BGC C6 H62 sing N N 54 BGC C1 O1 sing N N 55 BGC C1 O5 sing N N 56 BGC C1 H1 sing N N 57 BGC O1 HO1 sing N N 58 BGC O2 HO2 sing N N 59 BGC O3 HO3 sing N N 60 BGC O4 HO4 sing N N 61 BGC O6 HO6 sing N N 62 CIT C1 O1 doub N N 63 CIT C1 O2 sing N N 64 CIT C1 C2 sing N N 65 CIT O2 HO2 sing N N 66 CIT C2 C3 sing N N 67 CIT C2 H21 sing N N 68 CIT C2 H22 sing N N 69 CIT C3 O7 sing N N 70 CIT C3 C4 sing N N 71 CIT C3 C6 sing N N 72 CIT O7 HO7 sing N N 73 CIT C4 C5 sing N N 74 CIT C4 H41 sing N N 75 CIT C4 H42 sing N N 76 CIT C5 O3 doub N N 77 CIT C5 O4 sing N N 78 CIT O4 HO4 sing N N 79 CIT C6 O5 doub N N 80 CIT C6 O6 sing N N 81 CIT O6 HO6 sing N N 82 DAL N CA sing N N 83 DAL N H sing N N 84 DAL N H2 sing N N 85 DAL CA CB sing N N 86 DAL CA C sing N N 87 DAL CA HA sing N N 88 DAL CB HB1 sing N N 89 DAL CB HB2 sing N N 90 DAL CB HB3 sing N N 91 DAL C O doub N N 92 DAL C OXT sing N N 93 DAL OXT HXT sing N N 94 DVC O5 C1 sing N N 95 DVC C2 C1 sing N N 96 DVC C1 O1 sing N N 97 DVC C1 H1 sing N N 98 DVC O1 HO1 sing N N 99 DVC C3 C2 sing N N 100 DVC C2 H2 sing N N 101 DVC C2 H2A sing N N 102 DVC C4 C3 sing N N 103 DVC N3 C3 sing N N 104 DVC C3 C3M sing N N 105 DVC N3 HN3 sing N N 106 DVC N3 HN3A sing N N 107 DVC O41 C4 sing N N 108 DVC O4 C4 sing N N 109 DVC C4 C5 sing N N 110 DVC O4 HO4 sing N N 111 DVC C6 C5 sing N N 112 DVC C5 O5 sing N N 113 DVC C5 H5 sing N N 114 DVC C6 H6 sing N N 115 DVC C6 H6A sing N N 116 DVC C6 H6B sing N N 117 DVC C3M H3M sing N N 118 DVC C3M H3MA sing N N 119 DVC C3M H3MB sing N N 120 DVC O41 HO41 sing N N 121 GHP N CA sing N N 122 GHP N H sing N N 123 GHP N H2 sing N N 124 GHP CA C sing N N 125 GHP CA C1 sing N N 126 GHP CA HA sing N N 127 GHP C O doub N N 128 GHP C OXT sing N N 129 GHP OXT HXT sing N N 130 GHP C1 C2 doub Y N 131 GHP C1 C6 sing Y N 132 GHP C2 C3 sing Y N 133 GHP C2 HC2 sing N N 134 GHP C3 C4 doub Y N 135 GHP C3 H3 sing N N 136 GHP C4 O4 sing N N 137 GHP C4 C5 sing Y N 138 GHP O4 HO4 sing N N 139 GHP C5 C6 doub Y N 140 GHP C5 H5 sing N N 141 GHP C6 H6 sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 MLU N CN sing N N 145 MLU N CA sing N N 146 MLU CA C sing N N 147 MLU CA CB sing N N 148 MLU C O doub N N 149 MLU C OXT sing N N 150 MLU CB CG sing N N 151 MLU CG CD1 sing N N 152 MLU CG CD2 sing N N 153 MLU N H sing N N 154 MLU CN HCN1 sing N N 155 MLU CN HCN2 sing N N 156 MLU CN HCN3 sing N N 157 MLU CA HA sing N N 158 MLU CB HB2 sing N N 159 MLU CB HB3 sing N N 160 MLU OXT HXT sing N N 161 MLU CG HG sing N N 162 MLU CD1 HD11 sing N N 163 MLU CD1 HD12 sing N N 164 MLU CD1 HD13 sing N N 165 MLU CD2 HD21 sing N N 166 MLU CD2 HD22 sing N N 167 MLU CD2 HD23 sing N N 168 MPD C1 C2 sing N N 169 MPD C1 H11 sing N N 170 MPD C1 H12 sing N N 171 MPD C1 H13 sing N N 172 MPD C2 O2 sing N N 173 MPD C2 CM sing N N 174 MPD C2 C3 sing N N 175 MPD O2 HO2 sing N N 176 MPD CM HM1 sing N N 177 MPD CM HM2 sing N N 178 MPD CM HM3 sing N N 179 MPD C3 C4 sing N N 180 MPD C3 H31 sing N N 181 MPD C3 H32 sing N N 182 MPD C4 O4 sing N N 183 MPD C4 C5 sing N N 184 MPD C4 H4 sing N N 185 MPD O4 HO4 sing N N 186 MPD C5 H51 sing N N 187 MPD C5 H52 sing N N 188 MPD C5 H53 sing N N 189 OMY N CA sing N N 190 OMY OCZ CZ sing N N 191 OMY CZ CE2 sing Y N 192 OMY CZ CE1 doub Y N 193 OMY CE2 CD2 doub Y N 194 OMY CD2 CG sing Y N 195 OMY CG CD1 doub Y N 196 OMY CG CB sing N N 197 OMY CD1 CE1 sing Y N 198 OMY CE1 CL sing N N 199 OMY C O doub N N 200 OMY C CA sing N N 201 OMY C OXT sing N N 202 OMY CA CB sing N N 203 OMY CB ODE sing N N 204 OMY N H sing N N 205 OMY N H2 sing N N 206 OMY CA HA sing N N 207 OMY OCZ HCZ sing N N 208 OMY CE2 HE2 sing N N 209 OMY CD2 HD2 sing N N 210 OMY CD1 HD1 sing N N 211 OMY CB HB sing N N 212 OMY OXT HXT sing N N 213 OMY ODE HDE sing N N 214 OMZ N CA sing N N 215 OMZ CA C sing N N 216 OMZ CA CB sing N N 217 OMZ C O doub N N 218 OMZ C OXT sing N N 219 OMZ CL CE1 sing N N 220 OMZ CB OC sing N N 221 OMZ CB CG sing N N 222 OMZ CG CD1 doub Y N 223 OMZ CG CD2 sing Y N 224 OMZ CD1 CE1 sing Y N 225 OMZ CD2 CE2 doub Y N 226 OMZ CE1 CZ doub Y N 227 OMZ CE2 CZ sing Y N 228 OMZ CZ OH sing N N 229 OMZ N H sing N N 230 OMZ N H2 sing N N 231 OMZ CA HA sing N N 232 OMZ CB HB sing N N 233 OMZ OXT HXT sing N N 234 OMZ OC HC sing N N 235 OMZ CD1 HD1 sing N N 236 OMZ CD2 HD2 sing N N 237 OMZ CE2 HE2 sing N N 238 OMZ OH HH sing N N 239 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 beta-D-glucopyranose BGC 3 '(2R,4S,6S)-4-azanyl-4,6-dimethyl-oxane-2,5,5-triol' DVC 4 D-ALANINE DAL 5 'CITRIC ACID' CIT 6 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 7 water HOH #