data_1HI5 # _entry.id 1HI5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.294 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1HI5 PDBE EBI-5748 WWPDB D_1290005748 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1HI2 unspecified 'EOSINOPHIL-DERIVED NEUROTOXIN (EDN) - SULPHATE COMPLEX' PDB 1HI3 unspecified ;EOSINOPHIL-DERIVED NEUROTOXIN (EDN) - ADENOSINE-2'-5'-DIPHOSPHATE COMPLEX ; PDB 1HI4 unspecified ;EOSINOPHIL-DERIVED NEUROTOXIN (EDN) - ADENOSINE-3'-5'-DIPHOSPHATE COMPLEX ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HI5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2001-01-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Leonidas, D.D.' 1 ? 'Boix, E.' 2 ? 'Prill, R.' 3 ? 'Suzuki, M.' 4 ? 'Turton, R.' 5 ? 'Minson, K.' 6 ? 'Swaminathan, G.J.' 7 ? 'Youle, R.J.' 8 ? 'Acharya, K.R.' 9 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Mapping the Ribonucleolytic Active Site of Eosinophil-Derived Neurotoxin (Edn): High Resolution Crystal Structures of Edn Complexes with Adenylic Nucleotide Inhibitors ; J.Biol.Chem. 276 15009 ? 2001 JBCHA3 US 0021-9258 0071 ? 11154698 10.1074/JBC.M010585200 1 'X-Ray Crystallographic Structure of Recombinant Eosinophil-Derived Neurotoxin at 1.83 A Resolution' J.Mol.Biol. 260 540 ? 1996 JMOBAK UK 0022-2836 0070 ? 8759319 10.1006/JMBI.1996.0420 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Leonidas, D.D.' 1 primary 'Boix, E.' 2 primary 'Prill, R.' 3 primary 'Suzuki, M.' 4 primary 'Turton, R.' 5 primary 'Minson, K.' 6 primary 'Swaminathan, G.J.' 7 primary 'Youle, R.J.' 8 primary 'Acharya, K.R.' 9 1 'Mosimann, S.C.' 10 1 'Newton, D.L.' 11 1 'Youle, R.J.' 12 1 'James, M.N.' 13 # _cell.entry_id 1HI5 _cell.length_a 52.646 _cell.length_b 56.318 _cell.length_c 41.771 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HI5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EOSINOPHIL-DERIVED NEUROTOXIN' 15611.750 1 3.1.27.5 ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 water nat water 18.015 132 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNASE-2, RNASE-US, EDN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVP LIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII ; _entity_poly.pdbx_seq_one_letter_code_can ;MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVP LIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 PRO n 1 4 PRO n 1 5 GLN n 1 6 PHE n 1 7 THR n 1 8 TRP n 1 9 ALA n 1 10 GLN n 1 11 TRP n 1 12 PHE n 1 13 GLU n 1 14 THR n 1 15 GLN n 1 16 HIS n 1 17 ILE n 1 18 ASN n 1 19 MET n 1 20 THR n 1 21 SER n 1 22 GLN n 1 23 GLN n 1 24 CYS n 1 25 THR n 1 26 ASN n 1 27 ALA n 1 28 MET n 1 29 GLN n 1 30 VAL n 1 31 ILE n 1 32 ASN n 1 33 ASN n 1 34 TYR n 1 35 GLN n 1 36 ARG n 1 37 ARG n 1 38 CYS n 1 39 LYS n 1 40 ASN n 1 41 GLN n 1 42 ASN n 1 43 THR n 1 44 PHE n 1 45 LEU n 1 46 LEU n 1 47 THR n 1 48 THR n 1 49 PHE n 1 50 ALA n 1 51 ASN n 1 52 VAL n 1 53 VAL n 1 54 ASN n 1 55 VAL n 1 56 CYS n 1 57 GLY n 1 58 ASN n 1 59 PRO n 1 60 ASN n 1 61 MET n 1 62 THR n 1 63 CYS n 1 64 PRO n 1 65 SER n 1 66 ASN n 1 67 LYS n 1 68 THR n 1 69 ARG n 1 70 LYS n 1 71 ASN n 1 72 CYS n 1 73 HIS n 1 74 HIS n 1 75 SER n 1 76 GLY n 1 77 SER n 1 78 GLN n 1 79 VAL n 1 80 PRO n 1 81 LEU n 1 82 ILE n 1 83 HIS n 1 84 CYS n 1 85 ASN n 1 86 LEU n 1 87 THR n 1 88 THR n 1 89 PRO n 1 90 SER n 1 91 PRO n 1 92 GLN n 1 93 ASN n 1 94 ILE n 1 95 SER n 1 96 ASN n 1 97 CYS n 1 98 ARG n 1 99 TYR n 1 100 ALA n 1 101 GLN n 1 102 THR n 1 103 PRO n 1 104 ALA n 1 105 ASN n 1 106 MET n 1 107 PHE n 1 108 TYR n 1 109 ILE n 1 110 VAL n 1 111 ALA n 1 112 CYS n 1 113 ASP n 1 114 ASN n 1 115 ARG n 1 116 ASP n 1 117 GLN n 1 118 ARG n 1 119 ARG n 1 120 ASP n 1 121 PRO n 1 122 PRO n 1 123 GLN n 1 124 TYR n 1 125 PRO n 1 126 VAL n 1 127 VAL n 1 128 PRO n 1 129 VAL n 1 130 HIS n 1 131 LEU n 1 132 ASP n 1 133 ARG n 1 134 ILE n 1 135 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue BLOOD _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle GRANULE _entity_src_gen.pdbx_gene_src_cell EOSINOPHIL _entity_src_gen.pdbx_gene_src_cellular_location 'SECRETORY GRANULES' _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNKD_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P10153 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1HI5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 135 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10153 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 161 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 134 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1HI5 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P10153 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'cloning artifact' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1HI5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.34 _exptl_crystal.density_percent_sol 44 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.5M AMMONIUM SULFATE, 0.1M SODIUM CACODYLATE PH 6.5, 5% ETHANOL' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ENRAF-NONIUS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1HI5 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.800 _reflns.number_obs 11749 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06400 _reflns.pdbx_netI_over_sigmaI 10.7000 _reflns.B_iso_Wilson_estimate 14.1 _reflns.pdbx_redundancy 5.000 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 82.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.26300 _reflns_shell.meanI_over_sigI_obs 4.200 _reflns_shell.pdbx_redundancy ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1HI5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11720 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 97.7 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.253 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 604 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 16.3 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1HI5 _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.19 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.26 _refine_analyze.Luzzati_sigma_a_free 0.24 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1089 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 1248 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 27.7 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.79 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.40 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.09 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.54 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.83 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work 1674 _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.percent_reflns_obs 89.9 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error 0.038 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP TOPHCSDX.PR 'X-RAY DIFFRACTION' 2 PAR TOP 'X-RAY DIFFRACTION' 3 LIG LIG # _struct.entry_id 1HI5 _struct.title ;Eosinophil-derived Neurotoxin (EDN) - Adenosine-5'-Diphosphate Complex ; _struct.pdbx_descriptor 'EOSINOPHIL-DERIVED NEUROTOXIN (E.C.3.1.27.5)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HI5 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, RNASE-2, RNASE US, RIBONUCLEASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? ILE A 17 ? THR A 6 ILE A 16 1 ? 11 HELX_P HELX_P2 2 GLN A 23 ? ARG A 36 ? GLN A 22 ARG A 35 1 ? 14 HELX_P HELX_P3 3 THR A 48 ? CYS A 56 ? THR A 47 CYS A 55 1 ? 9 HELX_P HELX_P4 4 ASN A 93 ? CYS A 97 ? ASN A 92 CYS A 96 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 23 A CYS 83 1_555 ? ? ? ? ? ? ? 2.032 ? disulf2 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 37 A CYS 96 1_555 ? ? ? ? ? ? ? 2.033 ? disulf3 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 55 A CYS 111 1_555 ? ? ? ? ? ? ? 2.037 ? disulf4 disulf ? ? A CYS 63 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 62 A CYS 71 1_555 ? ? ? ? ? ? ? 2.031 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLN A 41 ? LEU A 45 ? GLN A 40 LEU A 44 AA 2 VAL A 79 ? THR A 88 ? VAL A 78 THR A 87 AA 3 ARG A 98 ? MET A 106 ? ARG A 97 MET A 105 AB 1 ASN A 60 ? MET A 61 ? ASN A 59 MET A 60 AB 2 CYS A 72 ? HIS A 74 ? CYS A 71 HIS A 73 AB 3 TYR A 108 ? ASN A 114 ? TYR A 107 ASN A 113 AB 4 VAL A 126 ? ILE A 134 ? VAL A 125 ILE A 133 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 44 ? N PHE A 43 O ILE A 82 ? O ILE A 81 AA 2 3 N THR A 87 ? N THR A 86 O ARG A 98 ? O ARG A 97 AB 2 3 N HIS A 73 ? N HIS A 72 O VAL A 110 ? O VAL A 109 AB 3 4 N ASP A 113 ? N ASP A 112 O VAL A 127 ? O VAL A 126 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE ADP A 999' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLN A 15 ? GLN A 14 . ? 1_555 ? 2 AC1 12 HIS A 16 ? HIS A 15 . ? 1_555 ? 3 AC1 12 LYS A 39 ? LYS A 38 . ? 1_555 ? 4 AC1 12 GLN A 41 ? GLN A 40 . ? 1_555 ? 5 AC1 12 HIS A 83 ? HIS A 82 . ? 1_555 ? 6 AC1 12 HIS A 130 ? HIS A 129 . ? 1_555 ? 7 AC1 12 LEU A 131 ? LEU A 130 . ? 1_555 ? 8 AC1 12 HOH C . ? HOH A 2016 . ? 1_555 ? 9 AC1 12 HOH C . ? HOH A 2052 . ? 1_555 ? 10 AC1 12 HOH C . ? HOH A 2123 . ? 1_555 ? 11 AC1 12 HOH C . ? HOH A 2128 . ? 1_555 ? 12 AC1 12 HOH C . ? HOH A 2131 . ? 1_555 ? # _database_PDB_matrix.entry_id 1HI5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1HI5 _atom_sites.fract_transf_matrix[1][1] 0.018995 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017756 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023940 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 LYS 2 1 1 LYS LYS A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 GLN 5 4 4 GLN GLN A . n A 1 6 PHE 6 5 5 PHE PHE A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 TRP 8 7 7 TRP TRP A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 GLN 10 9 9 GLN GLN A . n A 1 11 TRP 11 10 10 TRP TRP A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 HIS 16 15 15 HIS HIS A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 MET 19 18 18 MET MET A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 GLN 22 21 21 GLN GLN A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 CYS 24 23 23 CYS CYS A . n A 1 25 THR 25 24 24 THR THR A . n A 1 26 ASN 26 25 25 ASN ASN A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 MET 28 27 27 MET MET A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 ASN 32 31 31 ASN ASN A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 TYR 34 33 33 TYR TYR A . n A 1 35 GLN 35 34 34 GLN GLN A . n A 1 36 ARG 36 35 35 ARG ARG A . n A 1 37 ARG 37 36 36 ARG ARG A . n A 1 38 CYS 38 37 37 CYS CYS A . n A 1 39 LYS 39 38 38 LYS LYS A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 GLN 41 40 40 GLN GLN A . n A 1 42 ASN 42 41 41 ASN ASN A . n A 1 43 THR 43 42 42 THR THR A . n A 1 44 PHE 44 43 43 PHE PHE A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 ASN 51 50 50 ASN ASN A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 ASN 54 53 53 ASN ASN A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 CYS 56 55 55 CYS CYS A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 MET 61 60 60 MET MET A . n A 1 62 THR 62 61 61 THR THR A . n A 1 63 CYS 63 62 62 CYS CYS A . n A 1 64 PRO 64 63 63 PRO PRO A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 ASN 66 65 65 ASN ASN A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 THR 68 67 67 THR THR A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 LYS 70 69 69 LYS LYS A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 CYS 72 71 71 CYS CYS A . n A 1 73 HIS 73 72 72 HIS HIS A . n A 1 74 HIS 74 73 73 HIS HIS A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 SER 77 76 76 SER SER A . n A 1 78 GLN 78 77 77 GLN GLN A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 PRO 80 79 79 PRO PRO A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 HIS 83 82 82 HIS HIS A . n A 1 84 CYS 84 83 83 CYS CYS A . n A 1 85 ASN 85 84 84 ASN ASN A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 PRO 89 88 88 PRO PRO A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 PRO 91 90 90 PRO PRO A . n A 1 92 GLN 92 91 91 GLN GLN A . n A 1 93 ASN 93 92 92 ASN ASN A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 CYS 97 96 96 CYS CYS A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 TYR 99 98 98 TYR TYR A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 ASN 105 104 104 ASN ASN A . n A 1 106 MET 106 105 105 MET MET A . n A 1 107 PHE 107 106 106 PHE PHE A . n A 1 108 TYR 108 107 107 TYR TYR A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 ASN 114 113 113 ASN ASN A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 GLN 117 116 116 GLN GLN A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 PRO 121 120 120 PRO PRO A . n A 1 122 PRO 122 121 121 PRO PRO A . n A 1 123 GLN 123 122 122 GLN GLN A . n A 1 124 TYR 124 123 123 TYR TYR A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 VAL 127 126 126 VAL VAL A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 HIS 130 129 129 HIS HIS A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 ARG 133 132 132 ARG ARG A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 ILE 135 134 134 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 999 999 ADP ADP A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . C 3 HOH 103 2103 2103 HOH HOH A . C 3 HOH 104 2104 2104 HOH HOH A . C 3 HOH 105 2105 2105 HOH HOH A . C 3 HOH 106 2106 2106 HOH HOH A . C 3 HOH 107 2107 2107 HOH HOH A . C 3 HOH 108 2108 2108 HOH HOH A . C 3 HOH 109 2109 2109 HOH HOH A . C 3 HOH 110 2110 2110 HOH HOH A . C 3 HOH 111 2111 2111 HOH HOH A . C 3 HOH 112 2112 2112 HOH HOH A . C 3 HOH 113 2113 2113 HOH HOH A . C 3 HOH 114 2114 2114 HOH HOH A . C 3 HOH 115 2115 2115 HOH HOH A . C 3 HOH 116 2116 2116 HOH HOH A . C 3 HOH 117 2117 2117 HOH HOH A . C 3 HOH 118 2118 2118 HOH HOH A . C 3 HOH 119 2119 2119 HOH HOH A . C 3 HOH 120 2120 2120 HOH HOH A . C 3 HOH 121 2121 2121 HOH HOH A . C 3 HOH 122 2122 2122 HOH HOH A . C 3 HOH 123 2123 2123 HOH HOH A . C 3 HOH 124 2124 2124 HOH HOH A . C 3 HOH 125 2125 2125 HOH HOH A . C 3 HOH 126 2126 2126 HOH HOH A . C 3 HOH 127 2127 2127 HOH HOH A . C 3 HOH 128 2128 2128 HOH HOH A . C 3 HOH 129 2129 2129 HOH HOH A . C 3 HOH 130 2130 2130 HOH HOH A . C 3 HOH 131 2131 2131 HOH HOH A . C 3 HOH 132 2132 2132 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-05-31 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-05-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Structure summary' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category struct # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_struct.title' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language X-PLOR refinement 3.851 ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SCALEPACK 'data scaling' . ? 3 ? ? ? ? AMoRE phasing . ? 4 ? ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 36 ? ? 175.57 146.04 2 1 LYS A 66 ? ? -48.86 -18.68 3 1 ASN A 92 ? ? -178.37 103.74 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 water HOH #