HEADER NUCLEAR RECEPTOR 08-JAN-01 1HJ1 TITLE RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH PURE TITLE 2 ANTIOESTROGEN ICI164,384 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OESTROGEN RECEPTOR BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: OESTROGEN RECEPTOR, ER-LBD; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: COMPLEXED WITH THE FULL ANTAGONIST ICI164,384 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: OESTROGEN RECEPTOR BETA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GI724; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLEX KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, OESTROGEN, ANTAGONIST EXPDTA X-RAY DIFFRACTION AUTHOR A.C.W.PIKE,A.M.BRZOZOWSKI,M.CARLQUIST REVDAT 4 13-DEC-23 1HJ1 1 LINK REVDAT 3 24-OCT-18 1HJ1 1 SOURCE REVDAT 2 24-FEB-09 1HJ1 1 VERSN REVDAT 1 04-JAN-02 1HJ1 0 JRNL AUTH A.C.W.PIKE,A.M.BRZOZOWSKI,J.WALTON,R.E.HUBBARD,A.G.THORSELL, JRNL AUTH 2 Y.L.LI,J.A.GUSTAFSSON,M.CARLQUIST JRNL TITL STRUCTURAL INSIGHTS INTO THE MODE OF ACTION OF A PURE JRNL TITL 2 ANTIESTROGEN JRNL REF STRUCTURE V. 9 145 2001 JRNL REFN ISSN 0969-2126 JRNL PMID 11250199 JRNL DOI 10.1016/S0969-2126(01)00568-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.C.PIKE,A.M.BRZOZOWSKI,J.WALTON,R.E.HUBBARD,T.BONN, REMARK 1 AUTH 2 J.A.GUSTAFSSON,M.CARLQUIST REMARK 1 TITL STRUCTURAL ASPECTS OF AGONISM AND ANTAGONISM IN THE REMARK 1 TITL 2 OESTROGEN RECEPTOR REMARK 1 REF BIOCHEM.SOC.TRANS. V. 28 396 2001 REMARK 1 REFN ISSN 0300-5127 REMARK 1 PMID 10961927 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 11328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 587 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1582 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.316 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.228 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.035 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.039 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.011 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.121 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.182 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.184 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : 0.148 ; 0.300 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 1.700 ; 7.000 REMARK 3 STAGGERED (DEGREES) : 17.700; 15.000 REMARK 3 TRANSVERSE (DEGREES) : 35.000; 20.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.839 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.928 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.075 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.301 ; 3.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT CORRECTION CALCULATED IN REMARK 3 XPLOR V3.843 WAS USED THROUGHOUT REFINEMENT. TEMPERATURE FACTORS REMARK 3 OF HG OF RESIDUE PMB A1437 REFINED ANISOTROPICALLY. ISOTROPIC REMARK 3 MODEL USED FOR REMAINING ATOMS. RESIDUES AFTER LYS435 ARE NOT REMARK 3 VISIBLE IN THE ELECTRON DENSITY MAPS. PCMBS MOLECULE COVALENTLY REMARK 3 BOUND (PMB) TO CYS289 REMARK 4 REMARK 4 1HJ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1290005263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9464 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE, CCP4 REMARK 200 STARTING MODEL: 1QKN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.0% (W/V) PEG 2000 MONOMETHYL ETHER REMARK 280 0.0035M NICKEL CHLORIDE 0.035M TRIS-HCL, PH 8.5, PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.17000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.17000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.33500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.17000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.33500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.17000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOMOLECULEHOMODIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.17000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 LEU A 213 REMARK 465 LEU A 214 REMARK 465 LEU A 215 REMARK 465 SER A 216 REMARK 465 THR A 217 REMARK 465 SER A 364 REMARK 465 MET A 365 REMARK 465 TYR A 366 REMARK 465 PRO A 367 REMARK 465 LEU A 368 REMARK 465 ALA A 369 REMARK 465 SER A 370 REMARK 465 ALA A 371 REMARK 465 ASN A 372 REMARK 465 GLN A 373 REMARK 465 GLU A 374 REMARK 465 ALA A 375 REMARK 465 GLU A 376 REMARK 465 SER A 377 REMARK 465 CYS A 436 REMARK 465 LYS A 437 REMARK 465 ASN A 438 REMARK 465 VAL A 439 REMARK 465 VAL A 440 REMARK 465 PRO A 441 REMARK 465 VAL A 442 REMARK 465 TYR A 443 REMARK 465 ASP A 444 REMARK 465 LEU A 445 REMARK 465 LEU A 446 REMARK 465 LEU A 447 REMARK 465 GLU A 448 REMARK 465 MET A 449 REMARK 465 LEU A 450 REMARK 465 ASN A 451 REMARK 465 ALA A 452 REMARK 465 HIS A 453 REMARK 465 LEU A 454 REMARK 465 THR A 455 REMARK 465 ARG A 456 REMARK 465 GLY A 457 REMARK 465 TYR A 458 REMARK 465 LYS A 459 REMARK 465 SER A 460 REMARK 465 SER A 461 REMARK 465 ILE A 462 REMARK 465 SER A 463 REMARK 465 GLY A 464 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 242 CG SD CE REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 LYS A 269 CE NZ REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 470 SER A 363 OG REMARK 470 SER A 378 OG REMARK 470 ARG A 379 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 380 CG CD CE NZ REMARK 470 LYS A 435 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 239 CD - NE - CZ ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG A 239 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 239 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLU A 292 OE1 - CD - OE2 ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 301 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 341 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 343 CD - NE - CZ ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG A 421 NH1 - CZ - NH2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 421 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1438 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 229 OE2 REMARK 620 2 HIS A 263 NE2 134.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PMB A1437 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 288 O REMARK 620 2 PMB A1437 C4 92.9 REMARK 620 3 CYS A 289 SG 92.9 164.6 REMARK 620 4 ARG A 421 NH2 155.0 84.6 96.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1439 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 305 NE2 REMARK 620 2 HIS A 305 NE2 88.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1438 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1439 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AOE A1436 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMB A1437 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QKN RELATED DB: PDB REMARK 900 RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 ANTAGONIST RALOXIFENE DBREF 1HJ1 A 210 464 UNP Q62986 ESR2_RAT 255 509 SEQRES 1 A 255 VAL LYS GLU LEU LEU LEU SER THR LEU SER PRO GLU GLN SEQRES 2 A 255 LEU VAL LEU THR LEU LEU GLU ALA GLU PRO PRO ASN VAL SEQRES 3 A 255 LEU VAL SER ARG PRO SER MET PRO PHE THR GLU ALA SER SEQRES 4 A 255 MET MET MET SER LEU THR LYS LEU ALA ASP LYS GLU LEU SEQRES 5 A 255 VAL HIS MET ILE GLY TRP ALA LYS LYS ILE PRO GLY PHE SEQRES 6 A 255 VAL GLU LEU SER LEU LEU ASP GLN VAL ARG LEU LEU GLU SEQRES 7 A 255 SER CYS TRP MET GLU VAL LEU MET VAL GLY LEU MET TRP SEQRES 8 A 255 ARG SER ILE ASP HIS PRO GLY LYS LEU ILE PHE ALA PRO SEQRES 9 A 255 ASP LEU VAL LEU ASP ARG ASP GLU GLY LYS CYS VAL GLU SEQRES 10 A 255 GLY ILE LEU GLU ILE PHE ASP MET LEU LEU ALA THR THR SEQRES 11 A 255 SER ARG PHE ARG GLU LEU LYS LEU GLN HIS LYS GLU TYR SEQRES 12 A 255 LEU CYS VAL LYS ALA MET ILE LEU LEU ASN SER SER MET SEQRES 13 A 255 TYR PRO LEU ALA SER ALA ASN GLN GLU ALA GLU SER SER SEQRES 14 A 255 ARG LYS LEU THR HIS LEU LEU ASN ALA VAL THR ASP ALA SEQRES 15 A 255 LEU VAL TRP VAL ILE ALA LYS SER GLY ILE SER SER GLN SEQRES 16 A 255 GLN GLN SER VAL ARG LEU ALA ASN LEU LEU MET LEU LEU SEQRES 17 A 255 SER HIS VAL ARG HIS ILE SER ASN LYS GLY MET GLU HIS SEQRES 18 A 255 LEU LEU SER MET LYS CYS LYS ASN VAL VAL PRO VAL TYR SEQRES 19 A 255 ASP LEU LEU LEU GLU MET LEU ASN ALA HIS LEU THR ARG SEQRES 20 A 255 GLY TYR LYS SER SER ILE SER GLY HET AOE A1436 38 HET PMB A1437 11 HET NI A1438 1 HET NI A1439 1 HETNAM AOE N-BUTYL-11-[(7R,8R,9S,13S,14S,17S)-3,17-DIHYDROXY-13- HETNAM 2 AOE METHYL-7,8,9,11,12,13,14,15,16,17-DECAHYDRO-6H- HETNAM 3 AOE CYCLOPENTA[A]PHENANTHREN-7-YL]-N-METHYLUNDECANAMIDE HETNAM PMB PARA-MERCURY-BENZENESULFONIC ACID HETNAM NI NICKEL (II) ION FORMUL 2 AOE C34 H55 N O3 FORMUL 3 PMB C6 H5 HG O3 S FORMUL 4 NI 2(NI 2+) FORMUL 6 HOH *46(H2 O) HELIX 1 1 SER A 219 GLU A 231 1 13 HELIX 2 2 THR A 245 LYS A 270 1 26 HELIX 3 3 SER A 278 SER A 302 1 25 HELIX 4 4 ASP A 320 VAL A 325 5 6 HELIX 5 5 GLY A 327 LEU A 345 1 19 HELIX 6 6 GLN A 348 ASN A 362 1 15 HELIX 7 7 SER A 378 LYS A 398 1 21 HELIX 8 8 SER A 402 LYS A 435 1 34 SHEET 1 A 2 LYS A 308 ALA A 312 0 SHEET 2 A 2 LEU A 315 ASP A 318 -1 N LEU A 317 O LEU A 309 LINK OE2 GLU A 229 NI NI A1438 7556 1555 2.67 LINK NE2 HIS A 263 NI NI A1438 1555 1555 2.13 LINK O SER A 288 HG PMB A1437 1555 1555 2.99 LINK SG CYS A 289 HG PMB A1437 1555 1555 2.34 LINK NE2 HIS A 305 NI A NI A1439 7556 1555 2.65 LINK NE2 HIS A 305 NI A NI A1439 1555 1555 2.13 LINK NH2 ARG A 421 HG PMB A1437 1555 1555 3.07 SITE 1 AC1 2 GLU A 229 HIS A 263 SITE 1 AC2 1 HIS A 305 SITE 1 AC3 11 ALA A 257 GLU A 260 LEU A 261 LEU A 279 SITE 2 AC3 11 TRP A 290 LEU A 294 MET A 295 ARG A 301 SITE 3 AC3 11 PHE A 311 ILE A 331 HIS A 430 SITE 1 AC4 6 SER A 288 CYS A 289 GLU A 292 ARG A 421 SITE 2 AC4 6 HIS A 422 ASN A 425 CRYST1 60.380 82.670 106.340 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016562 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009404 0.00000