HEADER CYSTEINE MOTIF 26-AUG-97 1HP8 TITLE SOLUTION STRUCTURE OF HUMAN P8-MTCP1, A CYSTEINE-RICH PROTEIN ENCODED TITLE 2 BY THE MTCP1 ONCOGENE,REVEALS A NEW ALPHA-HELICAL ASSEMBLY MOTIF, TITLE 3 NMR, MINIMIZED AVERAGE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CX9C MOTIF-CONTAINING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MATURE T-CELL PROLIFERATION 1 NEIGHBOR PROTEIN,MATURE T-CELL COMPND 5 PROLIFERATION-1 TYPE A,MTCP-1 TYPE A,PROTEIN P8 MTCP-1,P8MTCP1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL: T-LYMPHOCYTE; SOURCE 6 CELLULAR_LOCATION: MITOCHONDRIA; SOURCE 7 GENE: CMC4, C6.1B, MTCP1, MTCP1NB; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PGEX2T KEYWDS HU-P8, LEUKEMIA, CYSTEINE MOTIF EXPDTA SOLUTION NMR AUTHOR P.BARTHE,L.CHICHE,M.P.STRUB,C.ROUMESTAND REVDAT 4 21-AUG-19 1HP8 1 COMPND SOURCE REMARK DBREF REVDAT 4 2 1 SEQADV SEQRES HET HETNAM REVDAT 4 3 1 FORMUL HELIX SSBOND ATOM REVDAT 3 24-FEB-09 1HP8 1 VERSN REVDAT 2 01-APR-03 1HP8 1 JRNL REVDAT 1 04-MAR-98 1HP8 0 JRNL AUTH P.BARTHE,Y.S.YANG,L.CHICHE,F.HOH,M.P.STRUB,L.GUIGNARD, JRNL AUTH 2 J.SOULIER,M.H.STERN,H.VAN TILBEURGH,J.M.LHOSTE,C.ROUMESTAND JRNL TITL SOLUTION STRUCTURE OF HUMAN P8MTCP1, A CYSTEINE-RICH PROTEIN JRNL TITL 2 ENCODED BY THE MTCP1 ONCOGENE, REVEALS A NEW ALPHA-HELICAL JRNL TITL 3 ASSEMBLY MOTIF. JRNL REF J.MOL.BIOL. V. 274 801 1997 JRNL REFN ISSN 0022-2836 JRNL PMID 9405159 JRNL DOI 10.1006/JMBI.1997.1438 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.SOULIER,A.MADANI,V.CACHEUX,M.ROSENZWAJG,F.SIGAUX,M.H.STERN REMARK 1 TITL THE MTCP-1/C6.1B GENE ENCODES FOR A CYTOPLASMIC 8 KD PROTEIN REMARK 1 TITL 2 OVEREXPRESSED IN T CELL LEUKEMIA BEARING A T(X;14) REMARK 1 TITL 3 TRANSLOCATION REMARK 1 REF ONCOGENE V. 9 3565 1994 REMARK 1 REFN ISSN 0950-9232 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.H.STERN,J.SOULIER,M.ROSENZWAJG,K.NAKAHARA,N.CANKI-KLAIN, REMARK 1 AUTH 2 A.AURIAS,F.SIGAUX,I.R.KIRSCH REMARK 1 TITL MTCP-1: A NOVEL GENE ON THE HUMAN CHROMOSOME XQ28 REMARK 1 TITL 2 TRANSLOCATED TO THE T CELL RECEPTOR ALPHA/DELTA LOCUS IN REMARK 1 TITL 3 MATURE T CELL PROLIFERATIONS REMARK 1 REF ONCOGENE V. 8 2475 1993 REMARK 1 REFN ISSN 0950-9232 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, REMARK 3 FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE 3D STRUCTURE OF P8-MTCP1 IN REMARK 3 SOLUTION BY NMR IS BASED ON 931 APPROXIMATE INTERPROTON DISTANCE REMARK 3 RESTRAINTS AND 57 TORSION ANGLE RESTRAINTS DERIVED FROM NOE AND REMARK 3 COUPLING CONSTANT MEASUREMENTS. THE STRUCTURES ARE CALCULATED REMARK 3 USING THE DISTANCE GEOMETRY DIANA METHOD AND REFINED USING A REMARK 3 SIMULATED-ANNEALING PROTOCOL WITH THE PROGRAM AMBER 4.1. REMARK 4 REMARK 4 1HP8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173949. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 10MM PO4 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; COSY; TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : UXNMR, GIFA, DIANA, AMBER REMARK 210 METHOD USED : DISTANCE GEOMETRY AND RESTRAINED REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 PRO A -3 REMARK 465 GLY A -2 REMARK 465 ILE A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 69 REMARK 465 ILE A 70 REMARK 465 HIS A 71 REMARK 465 ARG A 72 REMARK 465 ASP A 73 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 59 HG1 THR A 62 1.54 REMARK 500 OE1 GLN A 41 HH TYR A 42 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 64 130.64 147.44 REMARK 500 SER A 67 28.87 -145.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 36 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HP8 RELATED DB: PDB DBREF 1HP8 A 1 68 UNP P56277 CMC4_HUMAN 1 68 SEQADV 1HP8 GLY A -5 UNP P56277 EXPRESSION TAG SEQADV 1HP8 SER A -4 UNP P56277 EXPRESSION TAG SEQADV 1HP8 PRO A -3 UNP P56277 EXPRESSION TAG SEQADV 1HP8 GLY A -2 UNP P56277 EXPRESSION TAG SEQADV 1HP8 ILE A -1 UNP P56277 EXPRESSION TAG SEQADV 1HP8 HIS A 0 UNP P56277 EXPRESSION TAG SEQADV 1HP8 GLY A 69 UNP P56277 EXPRESSION TAG SEQADV 1HP8 ILE A 70 UNP P56277 EXPRESSION TAG SEQADV 1HP8 HIS A 71 UNP P56277 EXPRESSION TAG SEQADV 1HP8 ARG A 72 UNP P56277 EXPRESSION TAG SEQADV 1HP8 ASP A 73 UNP P56277 EXPRESSION TAG SEQRES 1 A 79 GLY SER PRO GLY ILE HIS MET PRO GLN LYS ASP PRO CYS SEQRES 2 A 79 GLN LYS GLN ALA CYS GLU ILE GLN LYS CYS LEU GLN ALA SEQRES 3 A 79 ASN SER TYR MET GLU SER LYS CYS GLN ALA VAL ILE GLN SEQRES 4 A 79 GLU LEU ARG LYS CYS CYS ALA GLN TYR PRO LYS GLY ARG SEQRES 5 A 79 SER VAL VAL CYS SER GLY PHE GLU LYS GLU GLU GLU GLU SEQRES 6 A 79 ASN LEU THR ARG LYS SER ALA SER LYS GLY ILE HIS ARG SEQRES 7 A 79 ASP HELIX 1 1 GLN A 8 ALA A 20 1 13 HELIX 2 2 GLN A 29 ALA A 40 1 12 HELIX 3 3 LYS A 44 ARG A 46 5 3 HELIX 4 4 VAL A 48 ARG A 63 1 16 SSBOND 1 CYS A 7 CYS A 38 1555 1555 2.05 SSBOND 2 CYS A 17 CYS A 28 1555 1555 2.06 SSBOND 3 CYS A 39 CYS A 50 1555 1555 2.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000