HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01-JAN-01 1HTW TITLE COMPLEX OF HI0065 WITH ADP AND MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HI0065; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: HI0065; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDE-BINDING FOLD, STRUCTURAL GENOMICS, STRUCTURE 2 FUNCTION KEYWDS 2 PROJECT, S2F, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.TEPLYAKOV,G.L.GILLILAND,STRUCTURE 2 FUNCTION PROJECT (S2F) REVDAT 3 09-AUG-23 1HTW 1 REMARK LINK REVDAT 2 24-FEB-09 1HTW 1 VERSN REVDAT 1 07-AUG-02 1HTW 0 JRNL AUTH A.TEPLYAKOV,G.OBMOLOVA,M.TORDOVA,N.THANKI,N.BONANDER, JRNL AUTH 2 E.EISENSTEIN,A.J.HOWARD,G.L.GILLILAND JRNL TITL CRYSTAL STRUCTURE OF THE YJEE PROTEIN FROM HAEMOPHILUS JRNL TITL 2 INFLUENZAE: A PUTATIVE ATPASE INVOLVED IN CELL WALL JRNL TITL 3 SYNTHESIS JRNL REF PROTEINS V. 48 220 2002 JRNL REFN ISSN 0887-3585 JRNL PMID 12112691 JRNL DOI 10.1002/PROT.10114 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 48750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM 5% REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3790 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 407 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HTW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1000012581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0642 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48750 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1FL9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.67500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROBABLY MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR C 87 NZ LYS C 117 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET B 14 CG MET B 14 SD 0.182 REMARK 500 MET B 98 CG MET B 98 SD 0.158 REMARK 500 MET C 14 CG MET C 14 SD 0.157 REMARK 500 MET C 53 CG MET C 53 SD 0.227 REMARK 500 MET C 98 CG MET C 98 SD 0.173 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 7 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 51 CD - NE - CZ ANGL. DEV. = 12.7 DEGREES REMARK 500 ARG A 51 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 TYR A 82 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 51 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 51 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 GLU B 113 OE1 - CD - OE2 ANGL. DEV. = -7.5 DEGREES REMARK 500 THR C 5 O - C - N ANGL. DEV. = 11.1 DEGREES REMARK 500 ARG C 16 CD - NE - CZ ANGL. DEV. = 40.0 DEGREES REMARK 500 ARG C 16 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 16 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 PHE C 17 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 TYR C 37 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG C 51 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 70 -37.45 79.91 REMARK 500 MET A 98 178.14 -54.15 REMARK 500 ARG A 101 -82.12 -23.14 REMARK 500 ASP A 135 -128.49 59.94 REMARK 500 SER A 157 175.37 -57.71 REMARK 500 GLU B 2 139.13 -39.74 REMARK 500 LEU B 70 -43.58 84.20 REMARK 500 ALA B 77 47.04 34.58 REMARK 500 ILE B 100 -2.88 -53.47 REMARK 500 ARG B 101 -84.09 -47.50 REMARK 500 ASP B 107 60.78 -67.72 REMARK 500 LYS B 117 -6.15 -59.57 REMARK 500 GLN B 119 -80.68 -26.62 REMARK 500 ASP B 135 -125.99 49.08 REMARK 500 LEU C 70 -58.60 83.71 REMARK 500 PRO C 92 -25.62 -37.89 REMARK 500 PHE C 97 -35.06 -38.43 REMARK 500 TYR C 103 -101.84 52.20 REMARK 500 ASP C 135 -137.62 61.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 134 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 563 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 38 O REMARK 620 2 ASN A 39 OD1 71.3 REMARK 620 3 ILE A 112 O 76.5 136.1 REMARK 620 4 SER A 115 N 139.0 119.0 104.9 REMARK 620 5 SER A 115 OG 155.1 84.1 122.2 57.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 562 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 40 O REMARK 620 2 HOH A 580 O 90.1 REMARK 620 3 HOH A 610 O 86.9 84.6 REMARK 620 4 HOH A 619 O 85.5 91.0 171.3 REMARK 620 5 HOH A 662 O 102.2 166.8 91.3 94.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 561 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 47 OG1 REMARK 620 2 GLU A 113 OE1 91.1 REMARK 620 3 ADP A 560 O1B 96.4 98.1 REMARK 620 4 HOH A 578 O 176.8 90.3 86.3 REMARK 620 5 HOH A 582 O 88.2 171.8 90.1 90.1 REMARK 620 6 HOH A 594 O 88.6 87.5 172.4 88.5 84.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 663 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 38 O REMARK 620 2 ASN B 39 OD1 74.9 REMARK 620 3 ILE B 112 O 75.1 138.1 REMARK 620 4 SER B 115 OG 152.0 78.0 131.8 REMARK 620 5 SER B 115 N 128.3 117.5 104.0 60.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 661 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 47 OG1 REMARK 620 2 GLU B 113 OE1 84.6 REMARK 620 3 ADP B 660 O1B 93.4 94.7 REMARK 620 4 HOH B 665 O 171.2 86.6 86.4 REMARK 620 5 HOH B 666 O 89.4 170.5 93.0 99.4 REMARK 620 6 HOH B 669 O 85.9 85.6 179.2 94.3 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 763 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU C 38 O REMARK 620 2 ASN C 39 OD1 74.3 REMARK 620 3 ILE C 112 O 76.2 136.9 REMARK 620 4 SER C 115 N 135.8 115.8 107.3 REMARK 620 5 SER C 115 OG 145.3 71.3 134.1 60.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 761 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 47 OG1 REMARK 620 2 GLU C 113 OE1 90.7 REMARK 620 3 ADP C 760 O1B 91.0 99.2 REMARK 620 4 HOH C 771 O 90.1 171.3 89.4 REMARK 620 5 HOH C 773 O 175.6 93.6 89.0 85.6 REMARK 620 6 HOH C 774 O 93.3 89.9 169.9 81.5 86.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 561 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 562 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 563 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 570 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 661 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 663 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 761 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 763 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 560 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 660 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP C 760 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FL9 RELATED DB: PDB REMARK 900 THE YJEE PROTEIN, APO-PROTEIN HI0065 REMARK 900 RELATED ID: HI0065 RELATED DB: TARGETDB DBREF 1HTW A 1 158 UNP P44492 Y065_HAEIN 1 158 DBREF 1HTW B 1 158 UNP P44492 Y065_HAEIN 1 158 DBREF 1HTW C 1 158 UNP P44492 Y065_HAEIN 1 158 SEQRES 1 A 158 MET GLU SER LEU THR GLN TYR ILE PRO ASP GLU PHE SER SEQRES 2 A 158 MET LEU ARG PHE GLY LYS LYS PHE ALA GLU ILE LEU LEU SEQRES 3 A 158 LYS LEU HIS THR GLU LYS ALA ILE MET VAL TYR LEU ASN SEQRES 4 A 158 GLY ASP LEU GLY ALA GLY LYS THR THR LEU THR ARG GLY SEQRES 5 A 158 MET LEU GLN GLY ILE GLY HIS GLN GLY ASN VAL LYS SER SEQRES 6 A 158 PRO THR TYR THR LEU VAL GLU GLU TYR ASN ILE ALA GLY SEQRES 7 A 158 LYS MET ILE TYR HIS PHE ASP LEU TYR ARG LEU ALA ASP SEQRES 8 A 158 PRO GLU GLU LEU GLU PHE MET GLY ILE ARG ASP TYR PHE SEQRES 9 A 158 ASN THR ASP SER ILE CYS LEU ILE GLU TRP SER GLU LYS SEQRES 10 A 158 GLY GLN GLY ILE LEU PRO GLU ALA ASP ILE LEU VAL ASN SEQRES 11 A 158 ILE ASP TYR TYR ASP ASP ALA ARG ASN ILE GLU LEU ILE SEQRES 12 A 158 ALA GLN THR ASN LEU GLY LYS ASN ILE ILE SER ALA PHE SEQRES 13 A 158 SER ASN SEQRES 1 B 158 MET GLU SER LEU THR GLN TYR ILE PRO ASP GLU PHE SER SEQRES 2 B 158 MET LEU ARG PHE GLY LYS LYS PHE ALA GLU ILE LEU LEU SEQRES 3 B 158 LYS LEU HIS THR GLU LYS ALA ILE MET VAL TYR LEU ASN SEQRES 4 B 158 GLY ASP LEU GLY ALA GLY LYS THR THR LEU THR ARG GLY SEQRES 5 B 158 MET LEU GLN GLY ILE GLY HIS GLN GLY ASN VAL LYS SER SEQRES 6 B 158 PRO THR TYR THR LEU VAL GLU GLU TYR ASN ILE ALA GLY SEQRES 7 B 158 LYS MET ILE TYR HIS PHE ASP LEU TYR ARG LEU ALA ASP SEQRES 8 B 158 PRO GLU GLU LEU GLU PHE MET GLY ILE ARG ASP TYR PHE SEQRES 9 B 158 ASN THR ASP SER ILE CYS LEU ILE GLU TRP SER GLU LYS SEQRES 10 B 158 GLY GLN GLY ILE LEU PRO GLU ALA ASP ILE LEU VAL ASN SEQRES 11 B 158 ILE ASP TYR TYR ASP ASP ALA ARG ASN ILE GLU LEU ILE SEQRES 12 B 158 ALA GLN THR ASN LEU GLY LYS ASN ILE ILE SER ALA PHE SEQRES 13 B 158 SER ASN SEQRES 1 C 158 MET GLU SER LEU THR GLN TYR ILE PRO ASP GLU PHE SER SEQRES 2 C 158 MET LEU ARG PHE GLY LYS LYS PHE ALA GLU ILE LEU LEU SEQRES 3 C 158 LYS LEU HIS THR GLU LYS ALA ILE MET VAL TYR LEU ASN SEQRES 4 C 158 GLY ASP LEU GLY ALA GLY LYS THR THR LEU THR ARG GLY SEQRES 5 C 158 MET LEU GLN GLY ILE GLY HIS GLN GLY ASN VAL LYS SER SEQRES 6 C 158 PRO THR TYR THR LEU VAL GLU GLU TYR ASN ILE ALA GLY SEQRES 7 C 158 LYS MET ILE TYR HIS PHE ASP LEU TYR ARG LEU ALA ASP SEQRES 8 C 158 PRO GLU GLU LEU GLU PHE MET GLY ILE ARG ASP TYR PHE SEQRES 9 C 158 ASN THR ASP SER ILE CYS LEU ILE GLU TRP SER GLU LYS SEQRES 10 C 158 GLY GLN GLY ILE LEU PRO GLU ALA ASP ILE LEU VAL ASN SEQRES 11 C 158 ILE ASP TYR TYR ASP ASP ALA ARG ASN ILE GLU LEU ILE SEQRES 12 C 158 ALA GLN THR ASN LEU GLY LYS ASN ILE ILE SER ALA PHE SEQRES 13 C 158 SER ASN HET MG A 561 1 HET MG A 562 1 HET NA A 563 1 HET ACT A 570 4 HET ADP A 560 27 HET MG B 661 1 HET NA B 663 1 HET ADP B 660 27 HET MG C 761 1 HET NA C 763 1 HET ADP C 760 27 HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM ACT ACETATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 4 MG 4(MG 2+) FORMUL 6 NA 3(NA 1+) FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 ADP 3(C10 H15 N5 O10 P2) FORMUL 15 HOH *407(H2 O) HELIX 1 1 ASP A 10 HIS A 29 1 20 HELIX 2 2 GLY A 45 ILE A 57 1 13 HELIX 3 3 GLU A 93 MET A 98 1 6 HELIX 4 4 GLY A 99 ASN A 105 1 7 HELIX 5 5 SER A 115 GLN A 119 5 5 HELIX 6 6 THR A 146 PHE A 156 1 11 HELIX 7 7 ASP B 10 LYS B 27 1 18 HELIX 8 8 GLY B 45 ILE B 57 1 13 HELIX 9 9 PRO B 92 PHE B 97 1 6 HELIX 10 10 ILE B 100 ASN B 105 1 6 HELIX 11 11 SER B 115 GLN B 119 5 5 HELIX 12 12 THR B 146 PHE B 156 1 11 HELIX 13 13 ASP C 10 LEU C 26 1 17 HELIX 14 14 GLY C 45 ILE C 57 1 13 HELIX 15 15 ASP C 91 GLY C 99 5 9 HELIX 16 16 ASP C 102 THR C 106 5 5 HELIX 17 17 SER C 115 GLN C 119 5 5 HELIX 18 18 THR C 146 ALA C 155 1 10 SHEET 1 A 7 SER A 3 ILE A 8 0 SHEET 2 A 7 ALA A 137 ALA A 144 -1 N ARG A 138 O ILE A 8 SHEET 3 A 7 ILE A 127 TYR A 134 -1 N LEU A 128 O ILE A 143 SHEET 4 A 7 ILE A 34 ASN A 39 1 O MET A 35 N ILE A 127 SHEET 5 A 7 ILE A 109 GLU A 113 1 N CYS A 110 O ILE A 34 SHEET 6 A 7 LYS A 79 ASP A 85 1 O MET A 80 N ILE A 109 SHEET 7 A 7 VAL A 71 ILE A 76 -1 O GLU A 72 N HIS A 83 SHEET 1 B 7 SER B 3 ILE B 8 0 SHEET 2 B 7 ALA B 137 ALA B 144 -1 N ARG B 138 O ILE B 8 SHEET 3 B 7 ILE B 127 TYR B 134 -1 N LEU B 128 O ILE B 143 SHEET 4 B 7 ILE B 34 ASN B 39 1 O MET B 35 N ILE B 127 SHEET 5 B 7 SER B 108 GLU B 113 1 O SER B 108 N ILE B 34 SHEET 6 B 7 LYS B 79 ASP B 85 1 O MET B 80 N ILE B 109 SHEET 7 B 7 VAL B 71 ILE B 76 -1 O GLU B 72 N HIS B 83 SHEET 1 C 7 SER C 3 ILE C 8 0 SHEET 2 C 7 ALA C 137 ALA C 144 -1 N ARG C 138 O ILE C 8 SHEET 3 C 7 ILE C 127 TYR C 134 -1 O LEU C 128 N ILE C 143 SHEET 4 C 7 ILE C 34 ASN C 39 1 O MET C 35 N ILE C 127 SHEET 5 C 7 SER C 108 GLU C 113 1 O SER C 108 N ILE C 34 SHEET 6 C 7 LYS C 79 ASP C 85 1 O MET C 80 N ILE C 109 SHEET 7 C 7 VAL C 71 ILE C 76 -1 O GLU C 72 N HIS C 83 LINK O LEU A 38 NA NA A 563 1555 1555 2.83 LINK OD1 ASN A 39 NA NA A 563 1555 1555 2.98 LINK O GLY A 40 MG MG A 562 1555 1555 2.38 LINK OG1 THR A 47 MG MG A 561 1555 1555 2.09 LINK O ILE A 112 NA NA A 563 1555 1555 2.81 LINK OE1 GLU A 113 MG MG A 561 1555 1555 2.17 LINK N SER A 115 NA NA A 563 1555 1555 2.94 LINK OG SER A 115 NA NA A 563 1555 1555 2.73 LINK O1B ADP A 560 MG MG A 561 1555 1555 2.00 LINK MG MG A 561 O HOH A 578 1555 1555 2.13 LINK MG MG A 561 O HOH A 582 1555 1555 2.19 LINK MG MG A 561 O HOH A 594 1555 1555 2.27 LINK MG MG A 562 O HOH A 580 1555 1555 2.27 LINK MG MG A 562 O HOH A 610 1555 1555 2.48 LINK MG MG A 562 O HOH A 619 1555 1555 2.45 LINK MG MG A 562 O HOH A 662 1555 1555 2.42 LINK O LEU B 38 NA NA B 663 1555 1555 2.90 LINK OD1 ASN B 39 NA NA B 663 1555 1555 2.92 LINK OG1 THR B 47 MG MG B 661 1555 1555 2.13 LINK O ILE B 112 NA NA B 663 1555 1555 2.84 LINK OE1 GLU B 113 MG MG B 661 1555 1555 2.19 LINK OG SER B 115 NA NA B 663 1555 1555 2.55 LINK N SER B 115 NA NA B 663 1555 1555 2.82 LINK O1B ADP B 660 MG MG B 661 1555 1555 2.02 LINK MG MG B 661 O HOH B 665 1555 1555 2.15 LINK MG MG B 661 O HOH B 666 1555 1555 1.99 LINK MG MG B 661 O HOH B 669 1555 1555 2.23 LINK O LEU C 38 NA NA C 763 1555 1555 2.87 LINK OD1 ASN C 39 NA NA C 763 1555 1555 2.92 LINK OG1 THR C 47 MG MG C 761 1555 1555 2.08 LINK O ILE C 112 NA NA C 763 1555 1555 2.71 LINK OE1 GLU C 113 MG MG C 761 1555 1555 2.07 LINK N SER C 115 NA NA C 763 1555 1555 2.89 LINK OG SER C 115 NA NA C 763 1555 1555 2.77 LINK O1B ADP C 760 MG MG C 761 1555 1555 2.03 LINK MG MG C 761 O HOH C 771 1555 1555 2.30 LINK MG MG C 761 O HOH C 773 1555 1555 2.15 LINK MG MG C 761 O HOH C 774 1555 1555 2.21 SITE 1 AC1 6 THR A 47 GLU A 113 ADP A 560 HOH A 578 SITE 2 AC1 6 HOH A 582 HOH A 594 SITE 1 AC2 5 GLY A 40 HOH A 580 HOH A 610 HOH A 619 SITE 2 AC2 5 HOH A 662 SITE 1 AC3 5 LEU A 38 ASN A 39 ILE A 112 TRP A 114 SITE 2 AC3 5 SER A 115 SITE 1 AC4 2 TYR A 133 ASP A 135 SITE 1 AC5 6 THR B 47 GLU B 113 ADP B 660 HOH B 665 SITE 2 AC5 6 HOH B 666 HOH B 669 SITE 1 AC6 5 LEU B 38 ASN B 39 ILE B 112 TRP B 114 SITE 2 AC6 5 SER B 115 SITE 1 AC7 6 THR C 47 GLU C 113 ADP C 760 HOH C 771 SITE 2 AC7 6 HOH C 773 HOH C 774 SITE 1 AC8 6 LEU C 38 ASN C 39 ILE C 112 GLU C 113 SITE 2 AC8 6 TRP C 114 SER C 115 SITE 1 AC9 20 ASP A 10 GLU A 11 MET A 14 ASP A 41 SITE 2 AC9 20 GLY A 43 ALA A 44 GLY A 45 LYS A 46 SITE 3 AC9 20 THR A 47 THR A 48 GLU A 113 ASP A 136 SITE 4 AC9 20 ARG A 138 MG A 561 HOH A 578 HOH A 582 SITE 5 AC9 20 HOH A 593 HOH A 624 HOH A 681 HOH A 709 SITE 1 BC1 19 ASP B 10 GLU B 11 MET B 14 ASP B 41 SITE 2 BC1 19 LEU B 42 GLY B 43 ALA B 44 GLY B 45 SITE 3 BC1 19 LYS B 46 THR B 47 THR B 48 GLU B 113 SITE 4 BC1 19 ASP B 136 ARG B 138 MG B 661 HOH B 665 SITE 5 BC1 19 HOH B 666 HOH B 682 HOH B 731 SITE 1 BC2 21 ASP C 10 GLU C 11 LEU C 42 GLY C 43 SITE 2 BC2 21 ALA C 44 GLY C 45 LYS C 46 THR C 47 SITE 3 BC2 21 THR C 48 GLU C 113 ASP C 136 ARG C 138 SITE 4 BC2 21 MG C 761 HOH C 771 HOH C 773 HOH C 795 SITE 5 BC2 21 HOH C 824 HOH C 825 HOH C 846 HOH C 847 SITE 6 BC2 21 HOH C 897 CRYST1 77.350 71.340 95.700 90.00 109.45 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012928 0.000000 0.004565 0.00000 SCALE2 0.000000 0.014017 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011082 0.00000