HEADER HYDROLASE (SERINE PROTEASE) 02-MAY-95 1HYL TITLE THE 1.8 A STRUCTURE OF COLLAGENASE FROM HYPODERMA LINEATUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPODERMA LINEATUM COLLAGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.21.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPODERMA LINEATUM; SOURCE 3 ORGANISM_COMMON: EARLY CATTLE GRUB; SOURCE 4 ORGANISM_TAXID: 7389 KEYWDS HYDROLASE (SERINE PROTEASE) EXPDTA X-RAY DIFFRACTION AUTHOR I.BROUTIN,B.ARNOUX,C.RICHE,A.LECROISEY,B.KEIL,C.PASCARD, AUTHOR 2 A.DUCRUIX REVDAT 2 24-FEB-09 1HYL 1 VERSN REVDAT 1 31-JUL-95 1HYL 0 JRNL AUTH I.BROUTIN,B.ARNOUX,C.RICHE,A.LECROISEY,B.KEIL, JRNL AUTH 2 C.PASCARD,A.DUCRUIX JRNL TITL 1.8 A STRUCTURE OF HYPODERMA LINEATUM COLLAGENASE: JRNL TITL 2 A MEMBER OF THE SERINE PROTEINASE FAMILY. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 52 380 1996 JRNL REFN ISSN 0907-4449 JRNL PMID 15299709 JRNL DOI 10.1107/S090744499501184X REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 2.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 80.7 REMARK 3 NUMBER OF REFLECTIONS : 38849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3556 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 295 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 3.00 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.19 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HYL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-89 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MADNES REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42152 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 15.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR 2.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 55.85000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.90000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 55.85000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 82.90000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 55.85000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 82.90000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 55.85000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 82.90000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 55.85000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 82.90000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 55.85000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 82.90000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 55.85000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 82.90000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 55.85000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 55.85000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 82.90000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 59A NE2 HIS A 59A CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 38 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP A 41 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 41 CE2 - CD2 - CG ANGL. DEV. = -5.0 DEGREES REMARK 500 TRP A 51 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP A 51 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 87 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 TYR A 99 CB - CG - CD1 ANGL. DEV. = -4.3 DEGREES REMARK 500 TYR A 114 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 TRP A 135 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP A 135 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TRP A 141 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 141 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR A 171 CB - CG - CD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU A 209 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 TRP A 237 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 237 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 GLN A 239 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG B 38 CB - CG - CD ANGL. DEV. = -18.8 DEGREES REMARK 500 ARG B 38 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG B 38 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 39 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 39 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 TRP B 41 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP B 41 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP B 41 CG - CD2 - CE3 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP B 51 CD1 - CG - CD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 TRP B 51 CG - CD1 - NE1 ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP B 51 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 87 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 122 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 TRP B 135 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP B 135 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP B 141 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP B 141 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 167 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 167 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 TRP B 237 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP B 237 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 152 147.49 -14.08 REMARK 500 PRO A 172 152.61 -49.24 REMARK 500 SER A 195 131.57 -35.45 REMARK 500 HIS B 111 116.24 -35.39 REMARK 500 THR B 115 -163.79 -129.53 REMARK 500 SER B 195 132.69 -31.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 343 DISTANCE = 5.54 ANGSTROMS REMARK 525 HOH A 390 DISTANCE = 5.13 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CTA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: CTB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL DBREF 1HYL A 16 246 UNP P08897 COGS_HYPLI 31 260 DBREF 1HYL B 16 246 UNP P08897 COGS_HYPLI 31 260 SEQADV 1HYL SER A 186 UNP P08897 CYS 200 CONFLICT SEQADV 1HYL LYS A 245 UNP P08897 ILE 259 CONFLICT SEQADV 1HYL SER B 186 UNP P08897 CYS 200 CONFLICT SEQADV 1HYL LYS B 245 UNP P08897 ILE 259 CONFLICT SEQRES 1 A 230 ILE ILE ASN GLY TYR GLU ALA TYR THR GLY LEU PHE PRO SEQRES 2 A 230 TYR GLN ALA GLY LEU ASP ILE THR LEU GLN ASP GLN ARG SEQRES 3 A 230 ARG VAL TRP CYS GLY GLY SER LEU ILE ASP ASN LYS TRP SEQRES 4 A 230 ILE LEU THR ALA ALA HIS CYS VAL HIS ASP ALA VAL SER SEQRES 5 A 230 VAL VAL VAL TYR LEU GLY SER ALA VAL GLN TYR GLU GLY SEQRES 6 A 230 GLU ALA VAL VAL ASN SER GLU ARG ILE ILE SER HIS SER SEQRES 7 A 230 MET PHE ASN PRO ASP THR TYR LEU ASN ASP VAL ALA LEU SEQRES 8 A 230 ILE LYS ILE PRO HIS VAL GLU TYR THR ASP ASN ILE GLN SEQRES 9 A 230 PRO ILE ARG LEU PRO SER GLY GLU GLU LEU ASN ASN LYS SEQRES 10 A 230 PHE GLU ASN ILE TRP ALA THR VAL SER GLY TRP GLY GLN SEQRES 11 A 230 SER ASN THR ASP THR VAL ILE LEU GLN TYR THR TYR ASN SEQRES 12 A 230 LEU VAL ILE ASP ASN ASP ARG CYS ALA GLN GLU TYR PRO SEQRES 13 A 230 PRO GLY ILE ILE VAL GLU SER THR ILE CYS GLY ASP THR SEQRES 14 A 230 SER ASP GLY LYS SER PRO CYS PHE GLY ASP SER GLY GLY SEQRES 15 A 230 PRO PHE VAL LEU SER ASP LYS ASN LEU LEU ILE GLY VAL SEQRES 16 A 230 VAL SER PHE VAL SER GLY ALA GLY CYS GLU SER GLY LYS SEQRES 17 A 230 PRO VAL GLY PHE SER ARG VAL THR SER TYR MET ASP TRP SEQRES 18 A 230 ILE GLN GLN ASN THR GLY ILE LYS PHE SEQRES 1 B 230 ILE ILE ASN GLY TYR GLU ALA TYR THR GLY LEU PHE PRO SEQRES 2 B 230 TYR GLN ALA GLY LEU ASP ILE THR LEU GLN ASP GLN ARG SEQRES 3 B 230 ARG VAL TRP CYS GLY GLY SER LEU ILE ASP ASN LYS TRP SEQRES 4 B 230 ILE LEU THR ALA ALA HIS CYS VAL HIS ASP ALA VAL SER SEQRES 5 B 230 VAL VAL VAL TYR LEU GLY SER ALA VAL GLN TYR GLU GLY SEQRES 6 B 230 GLU ALA VAL VAL ASN SER GLU ARG ILE ILE SER HIS SER SEQRES 7 B 230 MET PHE ASN PRO ASP THR TYR LEU ASN ASP VAL ALA LEU SEQRES 8 B 230 ILE LYS ILE PRO HIS VAL GLU TYR THR ASP ASN ILE GLN SEQRES 9 B 230 PRO ILE ARG LEU PRO SER GLY GLU GLU LEU ASN ASN LYS SEQRES 10 B 230 PHE GLU ASN ILE TRP ALA THR VAL SER GLY TRP GLY GLN SEQRES 11 B 230 SER ASN THR ASP THR VAL ILE LEU GLN TYR THR TYR ASN SEQRES 12 B 230 LEU VAL ILE ASP ASN ASP ARG CYS ALA GLN GLU TYR PRO SEQRES 13 B 230 PRO GLY ILE ILE VAL GLU SER THR ILE CYS GLY ASP THR SEQRES 14 B 230 SER ASP GLY LYS SER PRO CYS PHE GLY ASP SER GLY GLY SEQRES 15 B 230 PRO PHE VAL LEU SER ASP LYS ASN LEU LEU ILE GLY VAL SEQRES 16 B 230 VAL SER PHE VAL SER GLY ALA GLY CYS GLU SER GLY LYS SEQRES 17 B 230 PRO VAL GLY PHE SER ARG VAL THR SER TYR MET ASP TRP SEQRES 18 B 230 ILE GLN GLN ASN THR GLY ILE LYS PHE FORMUL 3 HOH *295(H2 O) HELIX 1 1 ALA A 56 VAL A 59 1 4 HELIX 2 2 GLY A 125A ASN A 128 5 5 HELIX 3 3 ASN A 165 GLU A 170A 1 7 HELIX 4 4 SER A 202 LYS A 206 5 3 HELIX 5 5 VAL A 231 TYR A 234 5 4 HELIX 6 6 TYR A 234 THR A 242 1 9 HELIX 7 7 ALA B 56 VAL B 59 1 4 HELIX 8 8 GLY B 125A ASN B 128 5 5 HELIX 9 9 ASN B 165 GLU B 170A 1 7 HELIX 10 10 SER B 202 LYS B 206 5 3 HELIX 11 11 VAL B 231 TYR B 234 5 4 HELIX 12 12 TYR B 234 THR B 242 1 9 SHEET 1 A 7 ALA A 81 ASN A 84 0 SHEET 2 A 7 ALA A 61 LEU A 68 -1 N LEU A 68 O ALA A 81 SHEET 3 A 7 GLN A 30 LEU A 37 -1 N THR A 36 O VAL A 62 SHEET 4 A 7 ARG A 39 ASP A 48 -1 N GLY A 44 O ALA A 31 SHEET 5 A 7 TRP A 51 THR A 54 -1 N LEU A 53 O SER A 45 SHEET 6 A 7 ALA A 104 ILE A 108 -1 N ILE A 106 O ILE A 52 SHEET 7 A 7 SER A 85 SER A 90 -1 N ILE A 89 O LEU A 105 SHEET 1 B 6 TRP A 135 GLY A 140 0 SHEET 2 B 6 GLN A 156 VAL A 162 -1 N ASN A 160 O ALA A 136 SHEET 3 B 6 THR A 180 ASP A 184 -1 N ASP A 184 O LEU A 161 SHEET 4 B 6 VAL A 226 ARG A 230 -1 N PHE A 228 O ILE A 181 SHEET 5 B 6 LEU A 208 PHE A 215 -1 N PHE A 215 O GLY A 227 SHEET 6 B 6 PRO A 198 LEU A 201 -1 N LEU A 201 O LEU A 208 SHEET 1 C 7 ALA B 81 ASN B 84 0 SHEET 2 C 7 ALA B 61 LEU B 68 -1 N LEU B 68 O ALA B 81 SHEET 3 C 7 GLN B 30 LEU B 37 -1 N THR B 36 O VAL B 62 SHEET 4 C 7 ARG B 39 ASP B 48 -1 N GLY B 44 O ALA B 31 SHEET 5 C 7 TRP B 51 THR B 54 -1 N LEU B 53 O SER B 45 SHEET 6 C 7 ALA B 104 ILE B 108 -1 N ILE B 106 O ILE B 52 SHEET 7 C 7 SER B 85 SER B 90 -1 N ILE B 89 O LEU B 105 SHEET 1 D 6 TRP B 135 GLY B 140 0 SHEET 2 D 6 GLN B 156 VAL B 162 -1 N ASN B 160 O ALA B 136 SHEET 3 D 6 THR B 180 ASP B 184 -1 N ASP B 184 O LEU B 161 SHEET 4 D 6 VAL B 226 ARG B 230 -1 N PHE B 228 O ILE B 181 SHEET 5 D 6 LEU B 208 PHE B 215 -1 N PHE B 215 O GLY B 227 SHEET 6 D 6 PRO B 198 LEU B 201 -1 N LEU B 201 O LEU B 208 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.01 SSBOND 2 CYS A 168 CYS A 182 1555 1555 1.98 SSBOND 3 CYS A 191 CYS A 220 1555 1555 1.99 SSBOND 4 CYS B 42 CYS B 58 1555 1555 2.02 SSBOND 5 CYS B 168 CYS B 182 1555 1555 2.01 SSBOND 6 CYS B 191 CYS B 220 1555 1555 1.99 SITE 1 CTA 3 HIS A 57 ASP A 102 SER A 195 SITE 1 CTB 3 HIS B 57 ASP B 102 SER B 195 CRYST1 111.700 111.700 165.800 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008953 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008953 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006031 0.00000