HEADER CELL CYCLE 21-JAN-01 1HYQ TITLE MIND BACTERIAL CELL DIVISION REGULATOR FROM A. FULGIDUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION INHIBITOR (MIND-1); COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MIND; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 GENE: AF0696; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHIS17 KEYWDS MINC, FTSZ, BACTERIAL CELL DIVISION, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR S.C.CORDELL,J.LOWE REVDAT 3 07-FEB-24 1HYQ 1 REMARK REVDAT 2 24-FEB-09 1HYQ 1 VERSN REVDAT 1 14-MAR-01 1HYQ 0 JRNL AUTH S.C.CORDELL,J.LOWE JRNL TITL CRYSTAL STRUCTURE OF THE BACTERIAL CELL DIVISION REGULATOR JRNL TITL 2 MIND. JRNL REF FEBS LETT. V. 492 160 2001 JRNL REFN ISSN 0014-5793 JRNL PMID 11248256 JRNL DOI 10.1016/S0014-5793(01)02216-5 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SOLVE REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 543 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.69 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2689 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 54 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1691 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.36800 REMARK 3 B22 (A**2) : 3.36800 REMARK 3 B33 (A**2) : -6.73500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.332 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1000012692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900, 0.97920, 0.93930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10622 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.28100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% PEG6000, 100MM TRIS BUFFER PH 8.6, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.66650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.15600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.15600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.49975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.15600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.15600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.83325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.15600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.15600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.49975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.15600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.15600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.83325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.66650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 234 REMARK 465 GLY A 235 REMARK 465 ALA A 236 REMARK 465 LYS A 237 REMARK 465 LYS A 238 REMARK 465 LYS A 239 REMARK 465 VAL A 240 REMARK 465 PRO A 241 REMARK 465 ALA A 242 REMARK 465 GLU A 243 REMARK 465 VAL A 244 REMARK 465 LYS A 245 REMARK 465 GLU A 246 REMARK 465 LYS A 247 REMARK 465 LYS A 248 REMARK 465 LYS A 249 REMARK 465 GLU A 250 REMARK 465 GLY A 251 REMARK 465 ALA A 252 REMARK 465 LEU A 253 REMARK 465 ALA A 254 REMARK 465 LYS A 255 REMARK 465 MET A 256 REMARK 465 LEU A 257 REMARK 465 ARG A 258 REMARK 465 ILE A 259 REMARK 465 PHE A 260 REMARK 465 ARG A 261 REMARK 465 ARG A 262 REMARK 465 ARG A 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 -163.03 -66.02 REMARK 500 ALA A 44 49.82 72.10 REMARK 500 ASN A 45 -158.23 -109.32 REMARK 500 ASN A 96 90.94 -176.98 REMARK 500 ALA A 120 -74.36 -25.38 REMARK 500 PRO A 142 10.69 -67.39 REMARK 500 ILE A 177 -76.30 -4.20 REMARK 500 GLU A 189 77.14 16.70 REMARK 500 REMARK 500 REMARK: NULL DBREF 1HYQ A 1 263 UNP O29562 O29562_ARCFU 1 263 SEQRES 1 A 263 MET VAL ARG THR ILE THR VAL ALA SER GLY LYS GLY GLY SEQRES 2 A 263 THR GLY LYS THR THR ILE THR ALA ASN LEU GLY VAL ALA SEQRES 3 A 263 LEU ALA GLN LEU GLY HIS ASP VAL THR ILE VAL ASP ALA SEQRES 4 A 263 ASP ILE THR MET ALA ASN LEU GLU LEU ILE LEU GLY MET SEQRES 5 A 263 GLU GLY LEU PRO VAL THR LEU GLN ASN VAL LEU ALA GLY SEQRES 6 A 263 GLU ALA ARG ILE ASP GLU ALA ILE TYR VAL GLY PRO GLY SEQRES 7 A 263 GLY VAL LYS VAL VAL PRO ALA GLY VAL SER LEU GLU GLY SEQRES 8 A 263 LEU ARG LYS ALA ASN PRO GLU LYS LEU GLU ASP VAL LEU SEQRES 9 A 263 THR GLN ILE MET GLU SER THR ASP ILE LEU LEU LEU ASP SEQRES 10 A 263 ALA PRO ALA GLY LEU GLU ARG SER ALA VAL ILE ALA ILE SEQRES 11 A 263 ALA ALA ALA GLN GLU LEU LEU LEU VAL VAL ASN PRO GLU SEQRES 12 A 263 ILE SER SER ILE THR ASP GLY LEU LYS THR LYS ILE VAL SEQRES 13 A 263 ALA GLU ARG LEU GLY THR LYS VAL LEU GLY VAL VAL VAL SEQRES 14 A 263 ASN ARG ILE THR THR LEU GLY ILE GLU MET ALA LYS ASN SEQRES 15 A 263 GLU ILE GLU ALA ILE LEU GLU ALA LYS VAL ILE GLY LEU SEQRES 16 A 263 ILE PRO GLU ASP PRO GLU VAL ARG ARG ALA ALA ALA TYR SEQRES 17 A 263 GLY LYS PRO VAL VAL LEU ARG SER PRO ASN SER PRO ALA SEQRES 18 A 263 ALA ARG ALA ILE VAL GLU LEU ALA ASN TYR ILE ALA GLY SEQRES 19 A 263 GLY ALA LYS LYS LYS VAL PRO ALA GLU VAL LYS GLU LYS SEQRES 20 A 263 LYS LYS GLU GLY ALA LEU ALA LYS MET LEU ARG ILE PHE SEQRES 21 A 263 ARG ARG ARG FORMUL 2 HOH *27(H2 O) HELIX 1 1 GLY A 15 LEU A 30 1 16 HELIX 2 2 ASN A 45 LEU A 50 1 6 HELIX 3 3 THR A 58 ALA A 64 1 7 HELIX 4 4 ARG A 68 ILE A 73 5 6 HELIX 5 5 PRO A 77 GLY A 79 5 3 HELIX 6 6 SER A 88 ASN A 96 1 9 HELIX 7 7 ASN A 96 SER A 110 1 15 HELIX 8 8 GLU A 123 ALA A 133 1 11 HELIX 9 9 GLU A 143 GLY A 161 1 19 HELIX 10 10 GLY A 176 LEU A 188 1 13 HELIX 11 11 ASP A 199 GLY A 209 1 11 HELIX 12 12 PRO A 211 SER A 216 1 6 HELIX 13 13 SER A 219 ALA A 233 1 15 SHEET 1 A 8 TYR A 74 VAL A 75 0 SHEET 2 A 8 LYS A 81 PRO A 84 -1 N VAL A 82 O TYR A 74 SHEET 3 A 8 VAL A 34 ASP A 38 1 O VAL A 34 N LYS A 81 SHEET 4 A 8 ILE A 113 ASP A 117 1 O ILE A 113 N THR A 35 SHEET 5 A 8 ARG A 3 SER A 9 1 O ARG A 3 N LEU A 114 SHEET 6 A 8 GLU A 135 VAL A 140 1 O GLU A 135 N THR A 6 SHEET 7 A 8 LYS A 163 ILE A 172 1 O LYS A 163 N LEU A 136 SHEET 8 A 8 VAL A 192 PRO A 197 1 N ILE A 193 O VAL A 167 CRYST1 90.312 90.312 83.333 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011073 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012000 0.00000