HEADER VIRAL PROTEIN 22-JAN-01 1HYW TITLE SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPW COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAD-TO-TAIL JOINING PROTEIN W; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GPW; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: W; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(LAMBDADE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS NOVEL FOLD; TWO HELICES, ONE TWO-STRANDED BETA-SHEET, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR K.L.MAXWELL,A.A.YEE,V.BOOTH,C.H.ARROWSMITH,M.GOLD,A.R.DAVIDSON REVDAT 4 23-FEB-22 1HYW 1 REMARK REVDAT 3 24-FEB-09 1HYW 1 VERSN REVDAT 2 31-DEC-02 1HYW 1 REMARK REVDAT 1 25-APR-01 1HYW 0 JRNL AUTH K.L.MAXWELL,A.A.YEE,V.BOOTH,C.H.ARROWSMITH,M.GOLD, JRNL AUTH 2 A.R.DAVIDSON JRNL TITL THE SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA PROTEIN W, A JRNL TITL 2 SMALL MORPHOGENETIC PROTEIN POSSESSING A NOVEL FOLD. JRNL REF J.MOL.BIOL. V. 308 9 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11302702 JRNL DOI 10.1006/JMBI.2001.4582 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851, X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER (X-PLOR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 1293 RESTRAINTS, 1171 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 72 REMARK 3 DIHEDRAL ANGLE RESTRAINTS,50 DISTANCE RESTRAINTS FROM HYDROGEN REMARK 3 BONDS. REMARK 4 REMARK 4 1HYW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1000012697. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 200MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5MM GPW U-15N, 13C; 10MM REMARK 210 PHOSPHATE BUFFER NA, 200MM NACL, REMARK 210 90% H2O,10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 1.7, NMRVIEW 3.0 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 ARG A 59 REMARK 465 ARG A 60 REMARK 465 ARG A 61 REMARK 465 GLY A 62 REMARK 465 PRO A 63 REMARK 465 ALA A 64 REMARK 465 GLY A 65 REMARK 465 PHE A 66 REMARK 465 TYR A 67 REMARK 465 VAL A 68 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 43 H ILE A 47 1.54 REMARK 500 O ILE A 47 H GLU A 51 1.57 REMARK 500 O ALA A 24 H PHE A 35 1.57 REMARK 500 O ASP A 16 H THR A 19 1.59 REMARK 500 O VAL A 40 H LYS A 44 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 19 -66.39 -149.28 REMARK 500 1 LYS A 21 -163.72 -53.22 REMARK 500 1 ARG A 22 -36.96 -162.53 REMARK 500 1 ASP A 29 52.30 -101.49 REMARK 500 1 THR A 36 -154.89 -125.36 REMARK 500 1 ALA A 37 39.82 -96.54 REMARK 500 1 THR A 54 158.45 -45.87 REMARK 500 2 THR A 2 99.80 68.19 REMARK 500 2 ARG A 3 50.35 -115.51 REMARK 500 2 LYS A 21 -164.03 -52.68 REMARK 500 2 ARG A 22 -42.40 -155.10 REMARK 500 2 ASP A 29 39.74 -96.16 REMARK 500 2 THR A 36 -162.84 -123.55 REMARK 500 2 ALA A 37 43.56 -88.95 REMARK 500 2 THR A 38 -54.74 -131.21 REMARK 500 2 GLN A 53 -89.46 -76.78 REMARK 500 2 THR A 54 164.71 51.53 REMARK 500 2 MET A 56 79.55 54.49 REMARK 500 2 THR A 57 118.35 -161.99 REMARK 500 3 THR A 2 58.42 -143.75 REMARK 500 3 THR A 19 -67.15 -154.13 REMARK 500 3 LYS A 21 -166.07 -52.89 REMARK 500 3 ARG A 22 -41.62 -155.19 REMARK 500 3 THR A 36 -162.22 -123.98 REMARK 500 3 ALA A 37 43.49 -89.06 REMARK 500 3 THR A 38 -55.83 -131.18 REMARK 500 3 GLN A 53 -104.37 -71.93 REMARK 500 3 THR A 54 161.09 54.43 REMARK 500 3 MET A 56 89.28 57.43 REMARK 500 4 THR A 2 118.77 -163.67 REMARK 500 4 THR A 19 61.91 -152.22 REMARK 500 4 LYS A 21 -158.64 -54.01 REMARK 500 4 ARG A 22 -45.06 -166.19 REMARK 500 4 ASP A 29 47.56 -96.81 REMARK 500 4 THR A 36 -156.90 -125.64 REMARK 500 4 THR A 54 157.65 -37.80 REMARK 500 5 THR A 2 -48.83 177.78 REMARK 500 5 ARG A 3 72.89 -111.15 REMARK 500 5 THR A 19 -68.34 -152.20 REMARK 500 5 LYS A 21 -166.94 -52.21 REMARK 500 5 ARG A 22 -43.13 -154.07 REMARK 500 5 ASP A 29 44.45 -102.99 REMARK 500 5 THR A 36 -162.74 -124.00 REMARK 500 5 ALA A 37 43.70 -88.84 REMARK 500 5 THR A 38 -53.00 -131.67 REMARK 500 5 GLN A 53 -100.87 -73.20 REMARK 500 5 THR A 54 155.39 54.92 REMARK 500 5 THR A 57 124.87 61.13 REMARK 500 6 LYS A 21 -163.88 -53.11 REMARK 500 6 ARG A 22 -40.88 -155.82 REMARK 500 REMARK 500 THIS ENTRY HAS 135 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1HYW A 1 68 UNP P68660 VHTJ_LAMBD 1 68 SEQRES 1 A 68 MET THR ARG GLN GLU GLU LEU ALA ALA ALA ARG ALA ALA SEQRES 2 A 68 LEU HIS ASP LEU MET THR GLY LYS ARG VAL ALA THR VAL SEQRES 3 A 68 GLN LYS ASP GLY ARG ARG VAL GLU PHE THR ALA THR SER SEQRES 4 A 68 VAL SER ASP LEU LYS LYS TYR ILE ALA GLU LEU GLU VAL SEQRES 5 A 68 GLN THR GLY MET THR GLN ARG ARG ARG GLY PRO ALA GLY SEQRES 6 A 68 PHE TYR VAL HELIX 1 1 ARG A 3 MET A 18 1 16 HELIX 2 2 SER A 39 THR A 54 1 16 SHEET 1 A 2 ALA A 24 GLN A 27 0 SHEET 2 A 2 ARG A 32 PHE A 35 -1 O VAL A 33 N VAL A 26 CISPEP 1 MET A 56 THR A 57 9 0.00 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1