HEADER TRANSCRIPTION 01-FEB-01 1I1G TITLE CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR FROM THE TITLE 2 ARCHAEON PYROCOCCUS FURIOSUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR LRPA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELIX-TURN-HELIX, LRP/ASNC FAMILY, PYROCOCCUS FURIOSUS, KEYWDS 2 TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.M.LEONARD,S.H.J.SMITS,S.E.SEDELNIKOVA,A.B.BRINKMAN,W.M.DE VOS,J.VAN AUTHOR 2 DER OOST,D.W.RICE,J.B.RAFFERTY REVDAT 5 07-FEB-24 1I1G 1 REMARK REVDAT 4 13-JUL-11 1I1G 1 VERSN REVDAT 3 24-FEB-09 1I1G 1 VERSN REVDAT 2 01-APR-03 1I1G 1 JRNL REVDAT 1 06-FEB-02 1I1G 0 JRNL AUTH P.M.LEONARD,S.H.SMITS,S.E.SEDELNIKOVA,A.B.BRINKMAN, JRNL AUTH 2 W.M.DE VOS,J.VAN DER OOST,D.W.RICE,J.B.RAFFERTY JRNL TITL CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR JRNL TITL 2 FROM THE ARCHAEON PYROCOCCUS FURIOSUS. JRNL REF EMBO J. V. 20 990 2001 JRNL REFN ISSN 0261-4189 JRNL PMID 11230123 JRNL DOI 10.1093/EMBOJ/20.5.990 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12686 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.316 REMARK 3 R VALUE (WORKING SET) : 0.313 REMARK 3 FREE R VALUE : 0.382 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 134 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2138 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1I1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-01. REMARK 100 THE DEPOSITION ID IS D_1000012784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13809 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, SODIUM CITRATE, PH REMARK 280 6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 50.65900 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.68050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.34025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.65900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 184.02075 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 184.02075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.65900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.34025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 50.65900 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 122.68050 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 50.65900 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 122.68050 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 50.65900 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 184.02075 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 61.34025 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.65900 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 61.34025 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 184.02075 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 50.65900 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 50.65900 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 122.68050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 AT PRESENT IT IS UNCLEAR WHETHER THE BIOLOGICAL UNIT REMARK 300 IS A DIMER OR OCTAMER. COORDINATES FOR A COMPLETE REMARK 300 BIOLOGICAL DIMER CAN BE GENERATED BY APPLYING BIOMT REMARK 300 TRANSFORMATIONS ONE AND FOUR LISTED IN REMARK 350 TO REMARK 300 SUBUNIT A IN THE ASYMMETRIC UNIT, OR BY APPLYING REMARK 300 BIOMT TRANSFORMATIONS ONE AND THREE TO SUBUNIT B. REMARK 300 COORDINATES FOR A COMPLETE BIOLOGICAL OCTAMER CAN BE REMARK 300 GENERATED BY APPLYING ALL FOUR BIOMT TRANSFORMATIONS REMARK 300 TO SUBUNITS A AND B IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 27330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -186.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS B 15 CG CD CE NZ REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 470 GLU B 126 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 3 N ASP A 3 CA -0.141 REMARK 500 ASP A 3 C ASP A 3 O 0.130 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 3 CA - C - N ANGL. DEV. = -13.2 DEGREES REMARK 500 ASP A 3 O - C - N ANGL. DEV. = 19.2 DEGREES REMARK 500 LEU A 13 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 ALA A 34 N - CA - CB ANGL. DEV. = -9.5 DEGREES REMARK 500 TYR A 62 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 LEU A 64 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 ASP A 110 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 LEU A 137 CA - C - O ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG B 5 CD - NE - CZ ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG B 5 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 38 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ALA B 41 N - CA - CB ANGL. DEV. = 8.8 DEGREES REMARK 500 GLU B 44 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 GLU B 75 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 GLU B 92 CB - CA - C ANGL. DEV. = 19.9 DEGREES REMARK 500 ASP B 99 CB - CG - OD1 ANGL. DEV. = 8.9 DEGREES REMARK 500 ASP B 99 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 113 CB - CG - OD1 ANGL. DEV. = 8.2 DEGREES REMARK 500 ALA B 134 N - CA - CB ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 150.82 -42.84 REMARK 500 ILE A 30 -154.34 -91.25 REMARK 500 ARG A 36 -74.55 -58.78 REMARK 500 GLU A 75 -11.42 -41.87 REMARK 500 GLU A 92 134.74 -179.29 REMARK 500 GLU A 126 123.68 -38.75 REMARK 500 LYS A 130 125.13 176.72 REMARK 500 PRO B 20 142.41 -35.59 REMARK 500 LEU B 64 76.43 -118.20 REMARK 500 LYS B 121 -62.10 -95.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 75 12.31 REMARK 500 VAL A 90 10.66 REMARK 500 GLU A 92 11.77 REMARK 500 ILE A 102 10.36 REMARK 500 SER A 119 12.53 REMARK 500 GLU B 23 -12.27 REMARK 500 THR B 33 -10.67 REMARK 500 LYS B 37 -10.84 REMARK 500 ILE B 47 -12.51 REMARK 500 ASP B 88 -11.13 REMARK 500 GLU B 92 12.14 REMARK 500 ASP B 113 -10.23 REMARK 500 REMARK 500 REMARK: NULL DBREF 1I1G A 1 141 UNP P42180 REG7_PYRFU 1 141 DBREF 1I1G B 1 141 UNP P42180 REG7_PYRFU 1 141 SEQRES 1 A 141 MET ILE ASP GLU ARG ASP LYS ILE ILE LEU GLU ILE LEU SEQRES 2 A 141 GLU LYS ASP ALA ARG THR PRO PHE THR GLU ILE ALA LYS SEQRES 3 A 141 LYS LEU GLY ILE SER GLU THR ALA VAL ARG LYS ARG VAL SEQRES 4 A 141 LYS ALA LEU GLU GLU LYS GLY ILE ILE GLU GLY TYR THR SEQRES 5 A 141 ILE LYS ILE ASN PRO LYS LYS LEU GLY TYR SER LEU VAL SEQRES 6 A 141 THR ILE THR GLY VAL ASP THR LYS PRO GLU LYS LEU PHE SEQRES 7 A 141 GLU VAL ALA GLU LYS LEU LYS GLU TYR ASP PHE VAL LYS SEQRES 8 A 141 GLU LEU TYR LEU SER SER GLY ASP HIS MET ILE MET ALA SEQRES 9 A 141 VAL ILE TRP ALA LYS ASP GLY GLU ASP LEU ALA GLU ILE SEQRES 10 A 141 ILE SER ASN LYS ILE GLY LYS ILE GLU GLY VAL THR LYS SEQRES 11 A 141 VAL CYS PRO ALA ILE ILE LEU GLU LYS LEU LYS SEQRES 1 B 141 MET ILE ASP GLU ARG ASP LYS ILE ILE LEU GLU ILE LEU SEQRES 2 B 141 GLU LYS ASP ALA ARG THR PRO PHE THR GLU ILE ALA LYS SEQRES 3 B 141 LYS LEU GLY ILE SER GLU THR ALA VAL ARG LYS ARG VAL SEQRES 4 B 141 LYS ALA LEU GLU GLU LYS GLY ILE ILE GLU GLY TYR THR SEQRES 5 B 141 ILE LYS ILE ASN PRO LYS LYS LEU GLY TYR SER LEU VAL SEQRES 6 B 141 THR ILE THR GLY VAL ASP THR LYS PRO GLU LYS LEU PHE SEQRES 7 B 141 GLU VAL ALA GLU LYS LEU LYS GLU TYR ASP PHE VAL LYS SEQRES 8 B 141 GLU LEU TYR LEU SER SER GLY ASP HIS MET ILE MET ALA SEQRES 9 B 141 VAL ILE TRP ALA LYS ASP GLY GLU ASP LEU ALA GLU ILE SEQRES 10 B 141 ILE SER ASN LYS ILE GLY LYS ILE GLU GLY VAL THR LYS SEQRES 11 B 141 VAL CYS PRO ALA ILE ILE LEU GLU LYS LEU LYS HELIX 1 1 GLU A 4 ASP A 16 1 13 HELIX 2 2 PRO A 20 GLY A 29 1 10 HELIX 3 3 SER A 31 GLY A 46 1 16 HELIX 4 4 PRO A 57 GLY A 61 5 5 HELIX 5 5 LYS A 76 TYR A 87 1 12 HELIX 6 6 ASP A 110 LYS A 121 1 12 HELIX 7 7 ASP B 3 ASP B 16 1 14 HELIX 8 8 PRO B 20 GLY B 29 1 10 HELIX 9 9 SER B 31 GLY B 46 1 16 HELIX 10 10 PRO B 57 GLY B 61 5 5 HELIX 11 11 LYS B 76 TYR B 87 1 12 HELIX 12 12 ASP B 110 LYS B 121 1 12 SHEET 1 A 4 VAL A 90 LEU A 93 0 SHEET 2 A 4 ILE A 102 ALA A 108 -1 O VAL A 105 N LYS A 91 SHEET 3 A 4 LEU A 64 THR A 72 -1 O LEU A 64 N ALA A 108 SHEET 4 A 4 VAL A 128 ILE A 135 -1 N THR A 129 O ASP A 71 SHEET 1 B 4 VAL B 90 LEU B 95 0 SHEET 2 B 4 ILE B 102 ALA B 108 -1 O MET B 103 N TYR B 94 SHEET 3 B 4 LEU B 64 THR B 72 -1 N LEU B 64 O ALA B 108 SHEET 4 B 4 VAL B 128 ILE B 135 -1 N THR B 129 O ASP B 71 CRYST1 101.318 101.318 245.361 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009870 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009870 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004076 0.00000