HEADER SUGAR BINDING PROTEIN 15-FEB-01 1I3H TITLE CONCANAVALIN A-DIMANNOSE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN-A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 164-281,RESIDUES 30-148; COMPND 5 SYNONYM: CON A,CON A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823 KEYWDS CONCANAVALIN A, PROTEIN-SUGAR COMPLEX, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.R.SANDERS,D.N.MOOTHOO,J.RAFTERY,A.J.HOWARD,J.R.HELLIWELL, AUTHOR 2 J.H.NAISMITH REVDAT 7 07-FEB-24 1I3H 1 REMARK HETSYN REVDAT 6 29-JUL-20 1I3H 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 28-JUN-17 1I3H 1 DBREF REVDAT 4 13-JUL-11 1I3H 1 VERSN REVDAT 3 24-FEB-09 1I3H 1 VERSN REVDAT 2 01-APR-03 1I3H 1 JRNL REVDAT 1 25-JUL-01 1I3H 0 JRNL AUTH D.A.SANDERS,D.N.MOOTHOO,J.RAFTERY,A.J.HOWARD,J.R.HELLIWELL, JRNL AUTH 2 J.H.NAISMITH JRNL TITL THE 1.2 A RESOLUTION STRUCTURE OF THE CON A-DIMANNOSE JRNL TITL 2 COMPLEX. JRNL REF J.MOL.BIOL. V. 310 875 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11453694 JRNL DOI 10.1006/JMBI.2001.4806 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 68767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 7754 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 253 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -1.00000 REMARK 3 B33 (A**2) : 1.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.020 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.658 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.369 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.072 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.137 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1I3H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-01. REMARK 100 THE DEPOSITION ID IS D_1000012856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-00; 01-JAN-00 REMARK 200 TEMPERATURE (KELVIN) : 298; 170 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; Y REMARK 200 RADIATION SOURCE : ROTATING ANODE; APS REMARK 200 BEAMLINE : NULL; 17-ID REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418; NULL REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; CCD REMARK 200 DETECTOR MANUFACTURER : MAC SCIENCE DIP-2000; BRUKER 2 X REMARK 200 2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76521 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.45300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, CITIRC ACID, MANGANESE REMARK 280 CHLORIDE, CALCIUM CHLORIDE, PH 5.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.20500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.71000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.20500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.71000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.20500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.71000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.45000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.20500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 32.71000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 90.90000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 86.41000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 90.90000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 86.41000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 HIS A 121 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 30 NZ REMARK 480 LYS A 39 NZ REMARK 480 ARG A 60 NH1 NH2 REMARK 480 ASN A 69 CB REMARK 480 LYS A 114 NZ REMARK 480 LYS A 135 CB CG CD CE REMARK 480 ASP A 151 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE LYS A 116 O HIS A 121 1.69 REMARK 500 CD LYS A 116 O HIS A 121 1.83 REMARK 500 O HOH A 433 O HOH A 434 2.09 REMARK 500 NZ LYS A 116 O HIS A 121 2.18 REMARK 500 O HOH A 285 O HOH A 443 2.19 REMARK 500 OD2 ASP A 151 O HOH A 306 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 477 O HOH A 477 4565 1.59 REMARK 500 O HOH A 291 O HOH A 479 2665 1.72 REMARK 500 OD1 ASP A 58 NH1 ARG A 60 4565 1.76 REMARK 500 O HOH A 332 O HOH A 454 6554 1.80 REMARK 500 O ASN A 69 NH1 ARG A 228 6554 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 30 CE LYS A 30 NZ 0.352 REMARK 500 MET A 42 SD MET A 42 CE -0.459 REMARK 500 ARG A 60 CZ ARG A 60 NH1 -0.203 REMARK 500 ARG A 60 CZ ARG A 60 NH2 0.654 REMARK 500 ARG A 60 CZ ARG A 60 NH2 0.179 REMARK 500 ASN A 69 CB ASN A 69 CG 0.242 REMARK 500 LYS A 114 CE LYS A 114 NZ 0.199 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 30 CD - CE - NZ ANGL. DEV. = -19.3 DEGREES REMARK 500 ARG A 60 NH1 - CZ - NH2 ANGL. DEV. = -32.7 DEGREES REMARK 500 ARG A 60 NE - CZ - NH1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG A 60 NE - CZ - NH1 ANGL. DEV. = -11.2 DEGREES REMARK 500 ARG A 60 NE - CZ - NH2 ANGL. DEV. = -18.1 DEGREES REMARK 500 ASN A 69 CB - CG - OD1 ANGL. DEV. = 18.9 DEGREES REMARK 500 ASN A 69 CB - CG - ND2 ANGL. DEV. = -36.0 DEGREES REMARK 500 THR A 120 CA - C - N ANGL. DEV. = -26.7 DEGREES REMARK 500 THR A 120 O - C - N ANGL. DEV. = 26.5 DEGREES REMARK 500 HIS A 121 C - N - CA ANGL. DEV. = 33.4 DEGREES REMARK 500 GLU A 122 C - N - CA ANGL. DEV. = 15.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 121 -33.23 61.80 REMARK 500 GLU A 122 75.81 10.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 60 0.16 SIDE CHAIN REMARK 500 ASN A 69 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 240 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 94.5 REMARK 620 3 ASP A 19 OD1 171.0 92.9 REMARK 620 4 HIS A 24 NE2 94.6 85.0 91.1 REMARK 620 5 HOH A 245 O 87.1 91.4 87.7 176.1 REMARK 620 6 HOH A 246 O 86.7 175.0 86.3 90.0 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 241 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 52.2 REMARK 620 3 TYR A 12 O 76.6 108.5 REMARK 620 4 ASN A 14 OD1 148.5 159.2 84.3 REMARK 620 5 ASP A 19 OD2 112.6 79.1 79.4 87.6 REMARK 620 6 HOH A 243 O 112.5 75.9 170.0 89.0 93.0 REMARK 620 7 HOH A 248 O 72.9 110.1 94.7 84.3 170.5 91.9 REMARK 620 N 1 2 3 4 5 6 DBREF 1I3H A 1 118 UNP P02866 CONA_CANEN 164 281 DBREF 1I3H A 119 237 UNP P02866 CONA_CANEN 30 148 SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN HET MAN B 1 12 HET MAN B 2 11 HET MN A 240 1 HET CA A 241 1 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 MAN 2(C6 H12 O6) FORMUL 3 MN MN 2+ FORMUL 4 CA CA 2+ FORMUL 5 HOH *253(H2 O) HELIX 1 1 ASN A 14 GLY A 18 5 5 HELIX 2 2 ASP A 80 VAL A 84 5 5 HELIX 3 3 THR A 150 GLY A 152 5 3 HELIX 4 4 THR A 226 LEU A 230 5 5 SHEET 1 A 7 LYS A 36 LYS A 39 0 SHEET 2 A 7 HIS A 24 ILE A 29 -1 N ILE A 25 O ALA A 38 SHEET 3 A 7 ILE A 4 ASP A 10 -1 O ALA A 6 N ASP A 28 SHEET 4 A 7 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 A 7 TRP A 88 SER A 96 -1 O ARG A 90 N SER A 215 SHEET 6 A 7 VAL A 170 PHE A 175 -1 N GLY A 171 O ALA A 95 SHEET 7 A 7 LEU A 140 GLY A 144 -1 N ILE A 141 O LEU A 174 SHEET 1 B 6 LYS A 36 LYS A 39 0 SHEET 2 B 6 HIS A 24 ILE A 29 -1 N ILE A 25 O ALA A 38 SHEET 3 B 6 ILE A 4 ASP A 10 -1 O ALA A 6 N ASP A 28 SHEET 4 B 6 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 B 6 TRP A 88 SER A 96 -1 O ARG A 90 N SER A 215 SHEET 6 B 6 VAL A 179 HIS A 180 -1 N VAL A 179 O VAL A 89 SHEET 1 C 6 ALA A 73 ASP A 78 0 SHEET 2 C 6 ARG A 60 SER A 66 -1 N LEU A 61 O TYR A 77 SHEET 3 C 6 VAL A 47 ASN A 55 -1 O THR A 49 N SER A 66 SHEET 4 C 6 VAL A 188 LEU A 198 -1 N PHE A 191 O TYR A 54 SHEET 5 C 6 THR A 105 LYS A 116 -1 O THR A 105 N LEU A 198 SHEET 6 C 6 THR A 123 PHE A 130 -1 N ASN A 124 O LEU A 115 SHEET 1 D 7 ALA A 73 ASP A 78 0 SHEET 2 D 7 ARG A 60 SER A 66 -1 N LEU A 61 O TYR A 77 SHEET 3 D 7 VAL A 47 ASN A 55 -1 O THR A 49 N SER A 66 SHEET 4 D 7 VAL A 188 LEU A 198 -1 N PHE A 191 O TYR A 54 SHEET 5 D 7 THR A 105 LYS A 116 -1 O THR A 105 N LEU A 198 SHEET 6 D 7 LEU A 154 GLU A 155 -1 O LEU A 154 N ILE A 106 SHEET 7 D 7 THR A 147 THR A 148 -1 O THR A 147 N GLU A 155 LINK O2 MAN B 1 C1 MAN B 2 1555 1555 1.44 LINK OE2 GLU A 8 MN MN A 240 1555 1555 2.17 LINK OD2 ASP A 10 MN MN A 240 1555 1555 2.15 LINK OD1 ASP A 10 CA CA A 241 1555 1555 2.44 LINK OD2 ASP A 10 CA CA A 241 1555 1555 2.49 LINK O TYR A 12 CA CA A 241 1555 1555 2.35 LINK OD1 ASN A 14 CA CA A 241 1555 1555 2.26 LINK OD1 ASP A 19 MN MN A 240 1555 1555 2.20 LINK OD2 ASP A 19 CA CA A 241 1555 1555 2.36 LINK NE2 HIS A 24 MN MN A 240 1555 1555 2.22 LINK MN MN A 240 O HOH A 245 1555 1555 2.21 LINK MN MN A 240 O HOH A 246 1555 1555 2.18 LINK CA CA A 241 O HOH A 243 1555 1555 2.39 LINK CA CA A 241 O HOH A 248 1555 1555 2.35 CISPEP 1 ALA A 207 ASP A 208 0 4.66 CRYST1 90.900 86.410 65.420 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011573 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015286 0.00000