data_1I3U # _entry.id 1I3U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I3U pdb_00001i3u 10.2210/pdb1i3u/pdb RCSB RCSB012869 ? ? WWPDB D_1000012869 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I3U _pdbx_database_status.recvd_initial_deposition_date 2001-02-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1I3V _pdbx_database_related.details ;Three-dimensional Structure of a Lama VHH domain unliganded ; _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spinelli, S.' 1 'Tegoni, M.' 2 'Frenken, L.' 3 'van Vliet, C.' 4 'Cambillau, C.' 5 # _citation.id primary _citation.title 'Lateral recognition of a dye hapten by a llama VHH domain.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 311 _citation.page_first 123 _citation.page_last 129 _citation.year 2001 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11469862 _citation.pdbx_database_id_DOI 10.1006/jmbi.2001.4856 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spinelli, S.' 1 ? primary 'Tegoni, M.' 2 ? primary 'Frenken, L.' 3 ? primary 'van Vliet, C.' 4 ? primary 'Cambillau, C.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ANTIBODY VHH LAMA DOMAIN' 13842.268 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn '5-(4,6-DIAMINO-[1,3,5]TRIAZIN-2-YLAMINO)-4-HYDROXY-3-(2-SULFO-PHENYLAZO)-NAPHTHALENE-2,7-DISULFONIC ACID' 612.573 1 ? ? ? ? 4 water nat water 18.015 164 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(CGN)VQLQESGGGLVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVS RDNAKNTVNLQMNSLKPEDTAVYYCAAKTTTWGGNDPNNWNYWGQGTQVTV ; _entity_poly.pdbx_seq_one_letter_code_can ;XVQLQESGGGLVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRDNA KNTVNLQMNSLKPEDTAVYYCAAKTTTWGGNDPNNWNYWGQGTQVTV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '5-(4,6-DIAMINO-[1,3,5]TRIAZIN-2-YLAMINO)-4-HYDROXY-3-(2-SULFO-PHENYLAZO)-NAPHTHALENE-2,7-DISULFONIC ACID' RR1 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CGN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 GLN n 1 14 ALA n 1 15 GLY n 1 16 ASP n 1 17 SER n 1 18 LEU n 1 19 LYS n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 GLU n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 ASP n 1 28 SER n 1 29 ILE n 1 30 GLY n 1 31 THR n 1 32 TYR n 1 33 VAL n 1 34 ILE n 1 35 GLY n 1 36 TRP n 1 37 PHE n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLU n 1 45 ARG n 1 46 ILE n 1 47 TYR n 1 48 LEU n 1 49 ALA n 1 50 THR n 1 51 ILE n 1 52 GLY n 1 53 ARG n 1 54 ASN n 1 55 LEU n 1 56 VAL n 1 57 GLY n 1 58 PRO n 1 59 SER n 1 60 ASP n 1 61 PHE n 1 62 TYR n 1 63 THR n 1 64 ARG n 1 65 TYR n 1 66 ALA n 1 67 ASP n 1 68 SER n 1 69 VAL n 1 70 LYS n 1 71 GLY n 1 72 ARG n 1 73 PHE n 1 74 ALA n 1 75 VAL n 1 76 SER n 1 77 ARG n 1 78 ASP n 1 79 ASN n 1 80 ALA n 1 81 LYS n 1 82 ASN n 1 83 THR n 1 84 VAL n 1 85 ASN n 1 86 LEU n 1 87 GLN n 1 88 MET n 1 89 ASN n 1 90 SER n 1 91 LEU n 1 92 LYS n 1 93 PRO n 1 94 GLU n 1 95 ASP n 1 96 THR n 1 97 ALA n 1 98 VAL n 1 99 TYR n 1 100 TYR n 1 101 CYS n 1 102 ALA n 1 103 ALA n 1 104 LYS n 1 105 THR n 1 106 THR n 1 107 THR n 1 108 TRP n 1 109 GLY n 1 110 GLY n 1 111 ASN n 1 112 ASP n 1 113 PRO n 1 114 ASN n 1 115 ASN n 1 116 TRP n 1 117 ASN n 1 118 TYR n 1 119 TRP n 1 120 GLY n 1 121 GLN n 1 122 GLY n 1 123 THR n 1 124 GLN n 1 125 VAL n 1 126 THR n 1 127 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name llama _entity_src_gen.gene_src_genus Lama _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lama glama' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9844 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CGN non-polymer . 5-OXO-PYRROLIDINE-2-CARBALDEHYDE ? 'C5 H7 N O2' 113.115 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RR1 non-polymer . '5-(4,6-DIAMINO-[1,3,5]TRIAZIN-2-YLAMINO)-4-HYDROXY-3-(2-SULFO-PHENYLAZO)-NAPHTHALENE-2,7-DISULFONIC ACID' 'REACTIVE RED 1 DYE' 'C19 H16 N8 O10 S3' 612.573 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CGN 1 1 1 CGN PGL A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 TRP 116 116 116 TRP TRP A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 TRP 119 119 119 TRP TRP A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 VAL 127 127 127 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 402 1 SO4 SO4 A . C 3 RR1 1 401 1 RR1 RR1 A . D 4 HOH 1 201 201 HOH WAT A . D 4 HOH 2 202 202 HOH WAT A . D 4 HOH 3 203 203 HOH WAT A . D 4 HOH 4 204 204 HOH WAT A . D 4 HOH 5 205 205 HOH WAT A . D 4 HOH 6 206 206 HOH WAT A . D 4 HOH 7 207 207 HOH WAT A . D 4 HOH 8 208 208 HOH WAT A . D 4 HOH 9 209 209 HOH WAT A . D 4 HOH 10 210 210 HOH WAT A . D 4 HOH 11 211 211 HOH WAT A . D 4 HOH 12 212 212 HOH WAT A . D 4 HOH 13 213 213 HOH WAT A . D 4 HOH 14 214 214 HOH WAT A . D 4 HOH 15 215 215 HOH WAT A . D 4 HOH 16 216 216 HOH WAT A . D 4 HOH 17 217 217 HOH WAT A . D 4 HOH 18 218 218 HOH WAT A . D 4 HOH 19 219 219 HOH WAT A . D 4 HOH 20 220 220 HOH WAT A . D 4 HOH 21 221 221 HOH WAT A . D 4 HOH 22 222 222 HOH WAT A . D 4 HOH 23 223 223 HOH WAT A . D 4 HOH 24 224 224 HOH WAT A . D 4 HOH 25 225 225 HOH WAT A . D 4 HOH 26 226 226 HOH WAT A . D 4 HOH 27 227 227 HOH WAT A . D 4 HOH 28 228 228 HOH WAT A . D 4 HOH 29 229 229 HOH WAT A . D 4 HOH 30 230 230 HOH WAT A . D 4 HOH 31 231 231 HOH WAT A . D 4 HOH 32 232 232 HOH WAT A . D 4 HOH 33 233 233 HOH WAT A . D 4 HOH 34 234 234 HOH WAT A . D 4 HOH 35 235 235 HOH WAT A . D 4 HOH 36 236 236 HOH WAT A . D 4 HOH 37 237 237 HOH WAT A . D 4 HOH 38 238 238 HOH WAT A . D 4 HOH 39 239 239 HOH WAT A . D 4 HOH 40 240 240 HOH WAT A . D 4 HOH 41 241 241 HOH WAT A . D 4 HOH 42 242 242 HOH WAT A . D 4 HOH 43 243 243 HOH WAT A . D 4 HOH 44 244 244 HOH WAT A . D 4 HOH 45 245 245 HOH WAT A . D 4 HOH 46 246 246 HOH WAT A . D 4 HOH 47 247 247 HOH WAT A . D 4 HOH 48 248 248 HOH WAT A . D 4 HOH 49 249 249 HOH WAT A . D 4 HOH 50 250 250 HOH WAT A . D 4 HOH 51 251 251 HOH WAT A . D 4 HOH 52 252 252 HOH WAT A . D 4 HOH 53 253 253 HOH WAT A . D 4 HOH 54 254 254 HOH WAT A . D 4 HOH 55 255 255 HOH WAT A . D 4 HOH 56 256 256 HOH WAT A . D 4 HOH 57 257 257 HOH WAT A . D 4 HOH 58 258 258 HOH WAT A . D 4 HOH 59 259 259 HOH WAT A . D 4 HOH 60 260 260 HOH WAT A . D 4 HOH 61 261 261 HOH WAT A . D 4 HOH 62 262 262 HOH WAT A . D 4 HOH 63 263 263 HOH WAT A . D 4 HOH 64 264 264 HOH WAT A . D 4 HOH 65 265 265 HOH WAT A . D 4 HOH 66 266 266 HOH WAT A . D 4 HOH 67 267 267 HOH WAT A . D 4 HOH 68 268 268 HOH WAT A . D 4 HOH 69 269 269 HOH WAT A . D 4 HOH 70 270 270 HOH WAT A . D 4 HOH 71 271 271 HOH WAT A . D 4 HOH 72 272 272 HOH WAT A . D 4 HOH 73 273 273 HOH WAT A . D 4 HOH 74 274 274 HOH WAT A . D 4 HOH 75 275 275 HOH WAT A . D 4 HOH 76 276 276 HOH WAT A . D 4 HOH 77 277 277 HOH WAT A . D 4 HOH 78 278 278 HOH WAT A . D 4 HOH 79 279 279 HOH WAT A . D 4 HOH 80 280 280 HOH WAT A . D 4 HOH 81 281 281 HOH WAT A . D 4 HOH 82 282 282 HOH WAT A . D 4 HOH 83 283 283 HOH WAT A . D 4 HOH 84 284 284 HOH WAT A . D 4 HOH 85 285 285 HOH WAT A . D 4 HOH 86 286 286 HOH WAT A . D 4 HOH 87 287 287 HOH WAT A . D 4 HOH 88 288 288 HOH WAT A . D 4 HOH 89 289 289 HOH WAT A . D 4 HOH 90 290 290 HOH WAT A . D 4 HOH 91 291 291 HOH WAT A . D 4 HOH 92 292 292 HOH WAT A . D 4 HOH 93 293 293 HOH WAT A . D 4 HOH 94 294 294 HOH WAT A . D 4 HOH 95 295 295 HOH WAT A . D 4 HOH 96 296 296 HOH WAT A . D 4 HOH 97 297 297 HOH WAT A . D 4 HOH 98 298 298 HOH WAT A . D 4 HOH 99 299 299 HOH WAT A . D 4 HOH 100 300 300 HOH WAT A . D 4 HOH 101 301 301 HOH WAT A . D 4 HOH 102 302 302 HOH WAT A . D 4 HOH 103 303 303 HOH WAT A . D 4 HOH 104 304 304 HOH WAT A . D 4 HOH 105 305 305 HOH WAT A . D 4 HOH 106 306 306 HOH WAT A . D 4 HOH 107 307 307 HOH WAT A . D 4 HOH 108 308 308 HOH WAT A . D 4 HOH 109 309 309 HOH WAT A . D 4 HOH 110 310 310 HOH WAT A . D 4 HOH 111 311 311 HOH WAT A . D 4 HOH 112 312 312 HOH WAT A . D 4 HOH 113 313 313 HOH WAT A . D 4 HOH 114 314 314 HOH WAT A . D 4 HOH 115 315 315 HOH WAT A . D 4 HOH 116 316 316 HOH WAT A . D 4 HOH 117 317 317 HOH WAT A . D 4 HOH 118 318 318 HOH WAT A . D 4 HOH 119 319 319 HOH WAT A . D 4 HOH 120 320 320 HOH WAT A . D 4 HOH 121 321 321 HOH WAT A . D 4 HOH 122 322 322 HOH WAT A . D 4 HOH 123 323 323 HOH WAT A . D 4 HOH 124 324 324 HOH WAT A . D 4 HOH 125 325 325 HOH WAT A . D 4 HOH 126 326 326 HOH WAT A . D 4 HOH 127 327 327 HOH WAT A . D 4 HOH 128 328 328 HOH WAT A . D 4 HOH 129 329 329 HOH WAT A . D 4 HOH 130 330 330 HOH WAT A . D 4 HOH 131 331 331 HOH WAT A . D 4 HOH 132 332 332 HOH WAT A . D 4 HOH 133 333 333 HOH WAT A . D 4 HOH 134 334 334 HOH WAT A . D 4 HOH 135 335 335 HOH WAT A . D 4 HOH 136 336 336 HOH WAT A . D 4 HOH 137 337 337 HOH WAT A . D 4 HOH 138 338 338 HOH WAT A . D 4 HOH 139 339 339 HOH WAT A . D 4 HOH 140 340 340 HOH WAT A . D 4 HOH 141 341 341 HOH WAT A . D 4 HOH 142 342 342 HOH WAT A . D 4 HOH 143 343 343 HOH WAT A . D 4 HOH 144 344 344 HOH WAT A . D 4 HOH 145 345 345 HOH WAT A . D 4 HOH 146 346 346 HOH WAT A . D 4 HOH 147 347 347 HOH WAT A . D 4 HOH 148 348 348 HOH WAT A . D 4 HOH 149 349 349 HOH WAT A . D 4 HOH 150 350 350 HOH WAT A . D 4 HOH 151 351 351 HOH WAT A . D 4 HOH 152 352 352 HOH WAT A . D 4 HOH 153 353 353 HOH WAT A . D 4 HOH 154 354 354 HOH WAT A . D 4 HOH 155 355 355 HOH WAT A . D 4 HOH 156 356 356 HOH WAT A . D 4 HOH 157 357 357 HOH WAT A . D 4 HOH 158 358 358 HOH WAT A . D 4 HOH 159 359 359 HOH WAT A . D 4 HOH 160 360 360 HOH WAT A . D 4 HOH 161 361 361 HOH WAT A . D 4 HOH 162 362 362 HOH WAT A . D 4 HOH 163 363 363 HOH WAT A . D 4 HOH 164 364 364 HOH WAT A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 CCP4 'data scaling' '(SCALA)' ? 5 # _cell.entry_id 1I3U _cell.length_a 77.435 _cell.length_b 77.435 _cell.length_c 175.019 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I3U _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 1I3U _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.65 _exptl_crystal.density_percent_sol 66.27 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details 'MME 5000, sodium acetate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.988 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.988 # _reflns.entry_id 1I3U _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.95 _reflns.number_obs 15022 _reflns.number_all 189080 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 4.7 _reflns.B_iso_Wilson_estimate 20.7 _reflns.pdbx_redundancy 2.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.144 _reflns_shell.meanI_over_sigI_obs 4.7 _reflns_shell.pdbx_redundancy 2.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1088 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1I3U _refine.ls_number_reflns_obs 15003 _refine.ls_number_reflns_all 0 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 2310814.65 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 18.50 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.232 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.232 _refine.ls_R_factor_R_free 0.266 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free 1194 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 32.2 _refine.aniso_B[1][1] 5.94 _refine.aniso_B[2][2] 5.94 _refine.aniso_B[3][3] -11.87 _refine.aniso_B[1][2] 5.75 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.364 _refine.solvent_model_param_bsol 51.87 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'VHH52 anti-R1 unliganded' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1I3U _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.23 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.32 _refine_analyze.Luzzati_sigma_a_free 0.27 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 977 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 1186 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 18.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.6 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.71 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.24 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.11 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.67 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.38 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 1319 _refine_ls_shell.R_factor_R_work 0.29 _refine_ls_shell.percent_reflns_obs 54.4 _refine_ls_shell.R_factor_R_free 0.305 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.percent_reflns_R_free 9.2 _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.number_reflns_obs 0 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 RR1_240399.PARAM RR1_240399.TOP 'X-RAY DIFFRACTION' 4 SO4.PARAM SO4.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1I3U _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1I3U _struct.title 'THREE-DIMENSIONAL STRUCTURE OF A LLAMA VHH DOMAIN COMPLEXED WITH THE DYE RR1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I3U _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'antibody, VHH fragment, Lama glama, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1I3U _struct_ref.pdbx_db_accession 1I3U _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1I3U _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1I3U _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 127 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 127 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 28 ? TYR A 32 ? SER A 28 TYR A 32 5 ? 5 HELX_P HELX_P2 2 ASN A 79 ? LYS A 81 ? ASN A 79 LYS A 81 5 ? 3 HELX_P HELX_P3 3 LYS A 92 ? THR A 96 ? LYS A 92 THR A 96 5 ? 5 HELX_P HELX_P4 4 ASP A 112 ? TRP A 116 ? ASP A 112 TRP A 116 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 22 A CYS 101 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? A CGN 1 C ? ? ? 1_555 A VAL 2 N ? ? A CGN 1 A VAL 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 3 ? SER A 7 ? GLN A 3 SER A 7 A 2 LEU A 18 ? SER A 25 ? LEU A 18 SER A 25 A 3 THR A 83 ? MET A 88 ? THR A 83 MET A 88 A 4 PHE A 73 ? ASP A 78 ? PHE A 73 ASP A 78 B 1 PHE A 61 ? TYR A 65 ? PHE A 61 TYR A 65 B 2 ILE A 46 ? LEU A 55 ? ILE A 46 LEU A 55 B 3 VAL A 33 ? GLN A 39 ? VAL A 33 GLN A 39 B 4 ALA A 97 ? LYS A 104 ? ALA A 97 LYS A 104 B 5 TYR A 118 ? TRP A 119 ? TYR A 118 TRP A 119 C 1 PHE A 61 ? TYR A 65 ? PHE A 61 TYR A 65 C 2 ILE A 46 ? LEU A 55 ? ILE A 46 LEU A 55 C 3 VAL A 33 ? GLN A 39 ? VAL A 33 GLN A 39 C 4 ALA A 97 ? LYS A 104 ? ALA A 97 LYS A 104 C 5 THR A 123 ? THR A 126 ? THR A 123 THR A 126 C 6 GLY A 10 ? LEU A 11 ? GLY A 10 LEU A 11 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 7 ? O SER A 7 N SER A 21 ? N SER A 21 A 2 3 N CYS A 22 ? N CYS A 22 O VAL A 84 ? O VAL A 84 A 3 4 N GLN A 87 ? N GLN A 87 O ALA A 74 ? O ALA A 74 B 1 2 O ARG A 64 ? O ARG A 64 N THR A 50 ? N THR A 50 B 2 3 N ILE A 51 ? N ILE A 51 O ILE A 34 ? O ILE A 34 B 3 4 N GLN A 39 ? N GLN A 39 O VAL A 98 ? O VAL A 98 B 4 5 N ALA A 103 ? N ALA A 103 O TYR A 118 ? O TYR A 118 C 1 2 O ARG A 64 ? O ARG A 64 N THR A 50 ? N THR A 50 C 2 3 N ILE A 51 ? N ILE A 51 O ILE A 34 ? O ILE A 34 C 3 4 N GLN A 39 ? N GLN A 39 O VAL A 98 ? O VAL A 98 C 4 5 N TYR A 99 ? N TYR A 99 O THR A 123 ? O THR A 123 C 5 6 O GLN A 124 ? O GLN A 124 N GLY A 10 ? N GLY A 10 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 402 ? 2 'BINDING SITE FOR RESIDUE SO4 A 402' AC2 Software A RR1 401 ? 17 'BINDING SITE FOR RESIDUE RR1 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLN A 39 ? GLN A 39 . ? 1_555 ? 2 AC1 2 ARG A 45 ? ARG A 45 . ? 1_555 ? 3 AC2 17 THR A 50 ? THR A 50 . ? 1_555 ? 4 AC2 17 GLY A 52 ? GLY A 52 . ? 1_555 ? 5 AC2 17 ARG A 53 ? ARG A 53 . ? 1_555 ? 6 AC2 17 ASN A 54 ? ASN A 54 . ? 1_555 ? 7 AC2 17 LEU A 55 ? LEU A 55 . ? 1_555 ? 8 AC2 17 LEU A 55 ? LEU A 55 . ? 16_545 ? 9 AC2 17 GLY A 57 ? GLY A 57 . ? 16_545 ? 10 AC2 17 PRO A 58 ? PRO A 58 . ? 16_545 ? 11 AC2 17 TYR A 62 ? TYR A 62 . ? 1_555 ? 12 AC2 17 ARG A 64 ? ARG A 64 . ? 1_555 ? 13 AC2 17 LYS A 104 ? LYS A 104 . ? 1_555 ? 14 AC2 17 THR A 107 ? THR A 107 . ? 1_555 ? 15 AC2 17 TRP A 108 ? TRP A 108 . ? 1_555 ? 16 AC2 17 GLY A 109 ? GLY A 109 . ? 1_555 ? 17 AC2 17 GLY A 110 ? GLY A 110 . ? 1_555 ? 18 AC2 17 HOH D . ? HOH A 243 . ? 1_555 ? 19 AC2 17 HOH D . ? HOH A 267 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 340 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 340 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_655 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 97 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 171.43 _pdbx_validate_torsion.psi 168.98 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE AN APPROPRIATE SEQUENCE DATABASE MATCH WAS NOT AVAILABLE AT THE TIME OF PROCESSING. ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CGN CB C N N 74 CGN CG C N N 75 CGN CD C N N 76 CGN N N N N 77 CGN OE1 O N N 78 CGN C C N N 79 CGN CA C N S 80 CGN O O N N 81 CGN HB1 H N N 82 CGN HB2 H N N 83 CGN HG1 H N N 84 CGN HG2 H N N 85 CGN HN H N N 86 CGN H H N N 87 CGN HA H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 MET N N N N 224 MET CA C N S 225 MET C C N N 226 MET O O N N 227 MET CB C N N 228 MET CG C N N 229 MET SD S N N 230 MET CE C N N 231 MET OXT O N N 232 MET H H N N 233 MET H2 H N N 234 MET HA H N N 235 MET HB2 H N N 236 MET HB3 H N N 237 MET HG2 H N N 238 MET HG3 H N N 239 MET HE1 H N N 240 MET HE2 H N N 241 MET HE3 H N N 242 MET HXT H N N 243 PHE N N N N 244 PHE CA C N S 245 PHE C C N N 246 PHE O O N N 247 PHE CB C N N 248 PHE CG C Y N 249 PHE CD1 C Y N 250 PHE CD2 C Y N 251 PHE CE1 C Y N 252 PHE CE2 C Y N 253 PHE CZ C Y N 254 PHE OXT O N N 255 PHE H H N N 256 PHE H2 H N N 257 PHE HA H N N 258 PHE HB2 H N N 259 PHE HB3 H N N 260 PHE HD1 H N N 261 PHE HD2 H N N 262 PHE HE1 H N N 263 PHE HE2 H N N 264 PHE HZ H N N 265 PHE HXT H N N 266 PRO N N N N 267 PRO CA C N S 268 PRO C C N N 269 PRO O O N N 270 PRO CB C N N 271 PRO CG C N N 272 PRO CD C N N 273 PRO OXT O N N 274 PRO H H N N 275 PRO HA H N N 276 PRO HB2 H N N 277 PRO HB3 H N N 278 PRO HG2 H N N 279 PRO HG3 H N N 280 PRO HD2 H N N 281 PRO HD3 H N N 282 PRO HXT H N N 283 RR1 O89 O N N 284 RR1 O90 O N N 285 RR1 O92 O N N 286 RR1 S85 S N N 287 RR1 C10 C Y N 288 RR1 C11 C Y N 289 RR1 C12 C Y N 290 RR1 C13 C Y N 291 RR1 C14 C Y N 292 RR1 C4 C Y N 293 RR1 C5 C Y N 294 RR1 C3 C Y N 295 RR1 C9 C Y N 296 RR1 C8 C Y N 297 RR1 C7 C Y N 298 RR1 C6 C Y N 299 RR1 C15 C Y N 300 RR1 C16 C Y N 301 RR1 C17 C Y N 302 RR1 C18 C Y N 303 RR1 O28 O N N 304 RR1 O37 O N N 305 RR1 O38 O N N 306 RR1 O41 O N N 307 RR1 S36 S N N 308 RR1 O39 O N N 309 RR1 O40 O N N 310 RR1 O42 O N N 311 RR1 S35 S N N 312 RR1 N1 N N N 313 RR1 N2 N N N 314 RR1 N19 N N N 315 RR1 C20 C Y N 316 RR1 N21 N Y N 317 RR1 C22 C Y N 318 RR1 N23 N Y N 319 RR1 C24 C Y N 320 RR1 N25 N Y N 321 RR1 NL1 N N N 322 RR1 NL2 N N N 323 RR1 H89 H N N 324 RR1 H11 H N N 325 RR1 H12 H N N 326 RR1 H13 H N N 327 RR1 H14 H N N 328 RR1 HC8 H N N 329 RR1 H16 H N N 330 RR1 H18 H N N 331 RR1 H28 H N N 332 RR1 H37 H N N 333 RR1 H39 H N N 334 RR1 H19 H N N 335 RR1 HL11 H N N 336 RR1 HL12 H N N 337 RR1 HL21 H N N 338 RR1 HL22 H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 SO4 S S N N 354 SO4 O1 O N N 355 SO4 O2 O N N 356 SO4 O3 O N N 357 SO4 O4 O N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CGN CB CG sing N N 70 CGN CB CA sing N N 71 CGN CB HB1 sing N N 72 CGN CB HB2 sing N N 73 CGN CG CD sing N N 74 CGN CG HG1 sing N N 75 CGN CG HG2 sing N N 76 CGN CD N sing N N 77 CGN CD OE1 doub N N 78 CGN N CA sing N N 79 CGN N HN sing N N 80 CGN C CA sing N N 81 CGN C O doub N N 82 CGN C H sing N N 83 CGN CA HA sing N N 84 CYS N CA sing N N 85 CYS N H sing N N 86 CYS N H2 sing N N 87 CYS CA C sing N N 88 CYS CA CB sing N N 89 CYS CA HA sing N N 90 CYS C O doub N N 91 CYS C OXT sing N N 92 CYS CB SG sing N N 93 CYS CB HB2 sing N N 94 CYS CB HB3 sing N N 95 CYS SG HG sing N N 96 CYS OXT HXT sing N N 97 GLN N CA sing N N 98 GLN N H sing N N 99 GLN N H2 sing N N 100 GLN CA C sing N N 101 GLN CA CB sing N N 102 GLN CA HA sing N N 103 GLN C O doub N N 104 GLN C OXT sing N N 105 GLN CB CG sing N N 106 GLN CB HB2 sing N N 107 GLN CB HB3 sing N N 108 GLN CG CD sing N N 109 GLN CG HG2 sing N N 110 GLN CG HG3 sing N N 111 GLN CD OE1 doub N N 112 GLN CD NE2 sing N N 113 GLN NE2 HE21 sing N N 114 GLN NE2 HE22 sing N N 115 GLN OXT HXT sing N N 116 GLU N CA sing N N 117 GLU N H sing N N 118 GLU N H2 sing N N 119 GLU CA C sing N N 120 GLU CA CB sing N N 121 GLU CA HA sing N N 122 GLU C O doub N N 123 GLU C OXT sing N N 124 GLU CB CG sing N N 125 GLU CB HB2 sing N N 126 GLU CB HB3 sing N N 127 GLU CG CD sing N N 128 GLU CG HG2 sing N N 129 GLU CG HG3 sing N N 130 GLU CD OE1 doub N N 131 GLU CD OE2 sing N N 132 GLU OE2 HE2 sing N N 133 GLU OXT HXT sing N N 134 GLY N CA sing N N 135 GLY N H sing N N 136 GLY N H2 sing N N 137 GLY CA C sing N N 138 GLY CA HA2 sing N N 139 GLY CA HA3 sing N N 140 GLY C O doub N N 141 GLY C OXT sing N N 142 GLY OXT HXT sing N N 143 HOH O H1 sing N N 144 HOH O H2 sing N N 145 ILE N CA sing N N 146 ILE N H sing N N 147 ILE N H2 sing N N 148 ILE CA C sing N N 149 ILE CA CB sing N N 150 ILE CA HA sing N N 151 ILE C O doub N N 152 ILE C OXT sing N N 153 ILE CB CG1 sing N N 154 ILE CB CG2 sing N N 155 ILE CB HB sing N N 156 ILE CG1 CD1 sing N N 157 ILE CG1 HG12 sing N N 158 ILE CG1 HG13 sing N N 159 ILE CG2 HG21 sing N N 160 ILE CG2 HG22 sing N N 161 ILE CG2 HG23 sing N N 162 ILE CD1 HD11 sing N N 163 ILE CD1 HD12 sing N N 164 ILE CD1 HD13 sing N N 165 ILE OXT HXT sing N N 166 LEU N CA sing N N 167 LEU N H sing N N 168 LEU N H2 sing N N 169 LEU CA C sing N N 170 LEU CA CB sing N N 171 LEU CA HA sing N N 172 LEU C O doub N N 173 LEU C OXT sing N N 174 LEU CB CG sing N N 175 LEU CB HB2 sing N N 176 LEU CB HB3 sing N N 177 LEU CG CD1 sing N N 178 LEU CG CD2 sing N N 179 LEU CG HG sing N N 180 LEU CD1 HD11 sing N N 181 LEU CD1 HD12 sing N N 182 LEU CD1 HD13 sing N N 183 LEU CD2 HD21 sing N N 184 LEU CD2 HD22 sing N N 185 LEU CD2 HD23 sing N N 186 LEU OXT HXT sing N N 187 LYS N CA sing N N 188 LYS N H sing N N 189 LYS N H2 sing N N 190 LYS CA C sing N N 191 LYS CA CB sing N N 192 LYS CA HA sing N N 193 LYS C O doub N N 194 LYS C OXT sing N N 195 LYS CB CG sing N N 196 LYS CB HB2 sing N N 197 LYS CB HB3 sing N N 198 LYS CG CD sing N N 199 LYS CG HG2 sing N N 200 LYS CG HG3 sing N N 201 LYS CD CE sing N N 202 LYS CD HD2 sing N N 203 LYS CD HD3 sing N N 204 LYS CE NZ sing N N 205 LYS CE HE2 sing N N 206 LYS CE HE3 sing N N 207 LYS NZ HZ1 sing N N 208 LYS NZ HZ2 sing N N 209 LYS NZ HZ3 sing N N 210 LYS OXT HXT sing N N 211 MET N CA sing N N 212 MET N H sing N N 213 MET N H2 sing N N 214 MET CA C sing N N 215 MET CA CB sing N N 216 MET CA HA sing N N 217 MET C O doub N N 218 MET C OXT sing N N 219 MET CB CG sing N N 220 MET CB HB2 sing N N 221 MET CB HB3 sing N N 222 MET CG SD sing N N 223 MET CG HG2 sing N N 224 MET CG HG3 sing N N 225 MET SD CE sing N N 226 MET CE HE1 sing N N 227 MET CE HE2 sing N N 228 MET CE HE3 sing N N 229 MET OXT HXT sing N N 230 PHE N CA sing N N 231 PHE N H sing N N 232 PHE N H2 sing N N 233 PHE CA C sing N N 234 PHE CA CB sing N N 235 PHE CA HA sing N N 236 PHE C O doub N N 237 PHE C OXT sing N N 238 PHE CB CG sing N N 239 PHE CB HB2 sing N N 240 PHE CB HB3 sing N N 241 PHE CG CD1 doub Y N 242 PHE CG CD2 sing Y N 243 PHE CD1 CE1 sing Y N 244 PHE CD1 HD1 sing N N 245 PHE CD2 CE2 doub Y N 246 PHE CD2 HD2 sing N N 247 PHE CE1 CZ doub Y N 248 PHE CE1 HE1 sing N N 249 PHE CE2 CZ sing Y N 250 PHE CE2 HE2 sing N N 251 PHE CZ HZ sing N N 252 PHE OXT HXT sing N N 253 PRO N CA sing N N 254 PRO N CD sing N N 255 PRO N H sing N N 256 PRO CA C sing N N 257 PRO CA CB sing N N 258 PRO CA HA sing N N 259 PRO C O doub N N 260 PRO C OXT sing N N 261 PRO CB CG sing N N 262 PRO CB HB2 sing N N 263 PRO CB HB3 sing N N 264 PRO CG CD sing N N 265 PRO CG HG2 sing N N 266 PRO CG HG3 sing N N 267 PRO CD HD2 sing N N 268 PRO CD HD3 sing N N 269 PRO OXT HXT sing N N 270 RR1 O89 S85 sing N N 271 RR1 O89 H89 sing N N 272 RR1 O90 S85 doub N N 273 RR1 O92 S85 doub N N 274 RR1 S85 C10 sing N N 275 RR1 C10 C11 doub Y N 276 RR1 C10 C4 sing Y N 277 RR1 C11 C12 sing Y N 278 RR1 C11 H11 sing N N 279 RR1 C12 C13 doub Y N 280 RR1 C12 H12 sing N N 281 RR1 C13 C14 sing Y N 282 RR1 C13 H13 sing N N 283 RR1 C14 C4 doub Y N 284 RR1 C14 H14 sing N N 285 RR1 C4 N1 sing N N 286 RR1 C5 C3 doub Y N 287 RR1 C5 C6 sing Y N 288 RR1 C5 O28 sing N N 289 RR1 C3 C9 sing Y N 290 RR1 C3 N2 sing N N 291 RR1 C9 C8 doub Y N 292 RR1 C9 S35 sing N N 293 RR1 C8 C7 sing Y N 294 RR1 C8 HC8 sing N N 295 RR1 C7 C6 doub Y N 296 RR1 C7 C18 sing Y N 297 RR1 C6 C15 sing Y N 298 RR1 C15 C16 doub Y N 299 RR1 C15 N19 sing N N 300 RR1 C16 C17 sing Y N 301 RR1 C16 H16 sing N N 302 RR1 C17 C18 doub Y N 303 RR1 C17 S36 sing N N 304 RR1 C18 H18 sing N N 305 RR1 O28 H28 sing N N 306 RR1 O37 S36 sing N N 307 RR1 O37 H37 sing N N 308 RR1 O38 S36 doub N N 309 RR1 O41 S36 doub N N 310 RR1 O39 S35 sing N N 311 RR1 O39 H39 sing N N 312 RR1 O40 S35 doub N N 313 RR1 O42 S35 doub N N 314 RR1 N1 N2 doub N E 315 RR1 N19 C20 sing N N 316 RR1 N19 H19 sing N N 317 RR1 C20 N21 doub Y N 318 RR1 C20 N25 sing Y N 319 RR1 N21 C22 sing Y N 320 RR1 C22 N23 doub Y N 321 RR1 C22 NL2 sing N N 322 RR1 N23 C24 sing Y N 323 RR1 C24 N25 doub Y N 324 RR1 C24 NL1 sing N N 325 RR1 NL1 HL11 sing N N 326 RR1 NL1 HL12 sing N N 327 RR1 NL2 HL21 sing N N 328 RR1 NL2 HL22 sing N N 329 SER N CA sing N N 330 SER N H sing N N 331 SER N H2 sing N N 332 SER CA C sing N N 333 SER CA CB sing N N 334 SER CA HA sing N N 335 SER C O doub N N 336 SER C OXT sing N N 337 SER CB OG sing N N 338 SER CB HB2 sing N N 339 SER CB HB3 sing N N 340 SER OG HG sing N N 341 SER OXT HXT sing N N 342 SO4 S O1 doub N N 343 SO4 S O2 doub N N 344 SO4 S O3 sing N N 345 SO4 S O4 sing N N 346 THR N CA sing N N 347 THR N H sing N N 348 THR N H2 sing N N 349 THR CA C sing N N 350 THR CA CB sing N N 351 THR CA HA sing N N 352 THR C O doub N N 353 THR C OXT sing N N 354 THR CB OG1 sing N N 355 THR CB CG2 sing N N 356 THR CB HB sing N N 357 THR OG1 HG1 sing N N 358 THR CG2 HG21 sing N N 359 THR CG2 HG22 sing N N 360 THR CG2 HG23 sing N N 361 THR OXT HXT sing N N 362 TRP N CA sing N N 363 TRP N H sing N N 364 TRP N H2 sing N N 365 TRP CA C sing N N 366 TRP CA CB sing N N 367 TRP CA HA sing N N 368 TRP C O doub N N 369 TRP C OXT sing N N 370 TRP CB CG sing N N 371 TRP CB HB2 sing N N 372 TRP CB HB3 sing N N 373 TRP CG CD1 doub Y N 374 TRP CG CD2 sing Y N 375 TRP CD1 NE1 sing Y N 376 TRP CD1 HD1 sing N N 377 TRP CD2 CE2 doub Y N 378 TRP CD2 CE3 sing Y N 379 TRP NE1 CE2 sing Y N 380 TRP NE1 HE1 sing N N 381 TRP CE2 CZ2 sing Y N 382 TRP CE3 CZ3 doub Y N 383 TRP CE3 HE3 sing N N 384 TRP CZ2 CH2 doub Y N 385 TRP CZ2 HZ2 sing N N 386 TRP CZ3 CH2 sing Y N 387 TRP CZ3 HZ3 sing N N 388 TRP CH2 HH2 sing N N 389 TRP OXT HXT sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'VHH52 anti-R1 unliganded' # _atom_sites.entry_id 1I3U _atom_sites.fract_transf_matrix[1][1] 0.012914 _atom_sites.fract_transf_matrix[1][2] 0.007456 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014912 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005714 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_