HEADER HYDROLASE 25-FEB-01 1I56 TITLE SOLUTION STRUCTURE OF CA2+-BOUND STATE OF CANINE MILK LYSOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.17; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 STRAIN: FAMILIARIS; SOURCE 6 ORGAN: MAMMARY GLAND; SOURCE 7 TISSUE: MILK; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BACTERIA; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PSCREEN 1-B(+) KEYWDS CALCIUM BINDING LYSOZYME, ENZYME, HYDROLASE EXPDTA SOLUTION NMR AUTHOR Y.KOBASHIGAWA,S.TSUDA,K.NITTA REVDAT 3 23-FEB-22 1I56 1 REMARK SEQADV REVDAT 2 24-FEB-09 1I56 1 VERSN REVDAT 1 27-FEB-02 1I56 0 JRNL AUTH Y.KOBASHIGAWA,S.TSUDA,K.NITTA JRNL TITL SOLUTION STRUCTURE OF CA2+-BOUND STATE OF CANINE MILK JRNL TITL 2 LYSOZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851, X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER (X-PLOR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1I56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-01. REMARK 100 THE DEPOSITION ID IS D_1000012917. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 2 -172.60 -58.91 REMARK 500 SER A 25 172.47 -59.65 REMARK 500 PHE A 39 18.91 57.25 REMARK 500 ASN A 48 -161.54 -117.69 REMARK 500 LYS A 63 -29.22 -158.74 REMARK 500 TRP A 65 21.26 -158.98 REMARK 500 SER A 68 -155.70 -144.70 REMARK 500 SER A 70 40.06 -89.83 REMARK 500 SER A 72 161.31 65.60 REMARK 500 LYS A 83 54.87 -93.13 REMARK 500 ILE A 89 52.97 -101.70 REMARK 500 CYS A 116 -68.14 -156.24 REMARK 500 TYR A 124 -105.83 -70.44 REMARK 500 ASN A 129 -150.96 38.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 11 0.32 SIDE CHAIN REMARK 500 ARG A 47 0.31 SIDE CHAIN REMARK 500 ARG A 98 0.29 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QQY RELATED DB: PDB REMARK 900 RELATED ID: 1EL1 RELATED DB: PDB DBREF 1I56 A 2 130 UNP P81708 LYSC1_CANFA 1 129 SEQADV 1I56 SER A 1 UNP P81708 CLONING ARTIFACT SEQRES 1 A 130 SER LYS ILE PHE SER LYS CYS GLU LEU ALA ARG LYS LEU SEQRES 2 A 130 LYS SER MET GLY MET ASP GLY PHE HIS GLY TYR SER LEU SEQRES 3 A 130 ALA ASN TRP VAL CYS MET ALA GLU TYR GLU SER ASN PHE SEQRES 4 A 130 ASN THR GLN ALA PHE ASN GLY ARG ASN SER ASN GLY SER SEQRES 5 A 130 SER ASP TYR GLY ILE PHE GLN LEU ASN SER LYS TRP TRP SEQRES 6 A 130 CYS LYS SER ASN SER HIS SER SER ALA ASN ALA CYS ASN SEQRES 7 A 130 ILE MET CYS SER LYS PHE LEU ASP ASP ASN ILE ASP ASP SEQRES 8 A 130 ASP ILE ALA CYS ALA LYS ARG VAL VAL LYS ASP PRO ASN SEQRES 9 A 130 GLY MET SER ALA TRP VAL ALA TRP VAL LYS HIS CYS LYS SEQRES 10 A 130 GLY LYS ASP LEU SER LYS TYR LEU ALA SER CYS ASN LEU HELIX 1 1 SER A 5 GLY A 17 1 13 HELIX 2 2 SER A 25 GLU A 36 1 12 HELIX 3 3 ASP A 90 ASP A 102 1 13 HELIX 4 4 ASN A 104 ALA A 108 5 5 HELIX 5 5 TRP A 109 CYS A 116 1 8 HELIX 6 6 TYR A 124 CYS A 128 5 5 SHEET 1 A 2 ASP A 54 TYR A 55 0 SHEET 2 A 2 LEU A 60 ASN A 61 -1 N LEU A 60 O TYR A 55 SSBOND 1 CYS A 31 CYS A 116 1555 1555 2.02 SSBOND 2 CYS A 66 CYS A 81 1555 1555 2.02 SSBOND 3 CYS A 77 CYS A 95 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000