HEADER HYDROLASE 27-MAR-01 1IB4 TITLE CRYSTAL STRUCTURE OF POLYGALACTURONASE FROM ASPERGILLUS ACULEATUS AT TITLE 2 PH4.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYGALACTURONASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.15 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ACULEATUS; SOURCE 3 ORGANISM_TAXID: 5053 KEYWDS POLYGALACTURONASE, GLYCOSYLHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.CHO,W.SHIN REVDAT 7 29-JUL-20 1IB4 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE ATOM REVDAT 6 04-OCT-17 1IB4 1 REMARK REVDAT 5 17-DEC-14 1IB4 1 LINK SITE REVDAT 4 13-JUL-11 1IB4 1 VERSN REVDAT 3 24-FEB-09 1IB4 1 VERSN REVDAT 2 01-APR-03 1IB4 1 JRNL REVDAT 1 19-SEP-01 1IB4 0 JRNL AUTH S.W.CHO,S.LEE,W.SHIN JRNL TITL THE X-RAY STRUCTURE OF ASPERGILLUS ACULEATUS JRNL TITL 2 POLYGALACTURONASE AND A MODELED STRUCTURE OF THE JRNL TITL 3 POLYGALACTURONASE-OCTAGALACTURONATE COMPLEX. JRNL REF J.MOL.BIOL. V. 311 863 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11518536 JRNL DOI 10.1006/JMBI.2001.4919 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.170 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.168 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.004 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1691 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 33790 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.161 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.159 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.000 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 2931 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 301 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 5592.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 2237 REMARK 3 NUMBER OF RESTRAINTS : 2115 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.000 REMARK 3 ANGLE DISTANCES (A) : 0.020 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.025 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.020 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.030 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.010 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.070 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IB4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAR-01. REMARK 100 THE DEPOSITION ID IS D_1000013117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-99 REMARK 200 TEMPERATURE (KELVIN) : 288 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS FAST REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MADNESS REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33790 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.15600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.02M CDCL2, 0.1M SODIUM REMARK 280 ACETATE PH 4.5 , PH 4.6, MICRODIALYSIS, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.20000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 18 O5 MAN B 418 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 95 CD GLU A 95 OE2 0.079 REMARK 500 CYS A 339 C CYS A 339 OXT 0.278 REMARK 500 GLU B 95 CD GLU B 95 OE2 0.085 REMARK 500 CYS B 339 C CYS B 339 OXT -0.179 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 90 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 93 17.26 -141.62 REMARK 500 PHE A 106 -66.23 -90.21 REMARK 500 VAL A 127 -129.91 -148.66 REMARK 500 VAL A 129 -79.46 -95.31 REMARK 500 TYR A 137 65.83 60.98 REMARK 500 ASN A 153 19.17 -142.33 REMARK 500 THR A 158 53.05 -96.74 REMARK 500 THR A 165 53.43 37.25 REMARK 500 ASN A 178 -156.93 -150.16 REMARK 500 ASN A 190 64.10 64.99 REMARK 500 ASN A 219 69.81 62.32 REMARK 500 ASP A 272 82.41 -161.39 REMARK 500 ASP A 313 49.91 70.27 REMARK 500 ASP B 45 124.38 -39.94 REMARK 500 ASP B 93 17.84 -142.59 REMARK 500 ALA B 109 79.89 -102.48 REMARK 500 ASN B 124 71.57 45.80 REMARK 500 VAL B 127 -123.66 -156.86 REMARK 500 VAL B 129 -81.80 -94.72 REMARK 500 TYR B 137 65.18 63.34 REMARK 500 THR B 158 45.36 -97.69 REMARK 500 THR B 165 39.06 38.13 REMARK 500 ASN B 190 65.66 62.80 REMARK 500 ARG B 212 -164.84 -116.42 REMARK 500 ASP B 272 82.92 -155.07 REMARK 500 ASN B 290 64.33 62.40 REMARK 500 SER B 305 73.33 -112.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP A 248 0.07 SIDE CHAIN REMARK 500 ASP B 313 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 936 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 95 OE2 REMARK 620 2 GLU A 95 OE1 54.6 REMARK 620 3 HIS B 202 NE2 138.4 83.8 REMARK 620 4 ASP B 231 OD1 107.7 107.4 82.9 REMARK 620 5 HOH B1309 O 92.9 75.9 74.8 157.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 935 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 202 NE2 REMARK 620 2 ASP A 231 OD1 75.8 REMARK 620 3 GLU B 95 OE2 131.2 104.7 REMARK 620 4 GLU B 95 OE1 77.4 108.4 55.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 937 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 285 OD2 REMARK 620 2 ASP B 313 OD2 89.0 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BHE RELATED DB: PDB REMARK 900 1BHE CONTAINS THE SAME PROTEIN FROM ERWINIA CAROTOVORA REMARK 900 SSP.CAROTOVORA REMARK 900 RELATED ID: 1CZF RELATED DB: PDB REMARK 900 1CZF CONTAINS ENDO-POLYGALACTURONASE II FROM ASPERGILLUS NIGER REMARK 900 RELATED ID: 1RMG RELATED DB: PDB REMARK 900 1RMG CONTAINS RHAMNOGALACTURONASE A REMARK 900 RELATED ID: 1IA5 RELATED DB: PDB REMARK 900 1IA5 CONTAINS THE SAME PROTEIN AT PH8.5 DBREF 1IB4 A 1 339 GB 3220207 AAC23565 40 378 DBREF 1IB4 B 1 339 GB 3220207 AAC23565 40 378 SEQRES 1 A 339 ALA THR THR CYS THR PHE SER GLY SER ASN GLY ALA SER SEQRES 2 A 339 SER ALA SER LYS SER LYS THR SER CYS SER THR ILE VAL SEQRES 3 A 339 LEU SER ASN VAL ALA VAL PRO SER GLY THR THR LEU ASP SEQRES 4 A 339 LEU THR LYS LEU ASN ASP GLY THR HIS VAL ILE PHE SER SEQRES 5 A 339 GLY GLU THR THR PHE GLY TYR LYS GLU TRP SER GLY PRO SEQRES 6 A 339 LEU ILE SER VAL SER GLY SER ASP LEU THR ILE THR GLY SEQRES 7 A 339 ALA SER GLY HIS SER ILE ASN GLY ASP GLY SER ARG TRP SEQRES 8 A 339 TRP ASP GLY GLU GLY GLY ASN GLY GLY LYS THR LYS PRO SEQRES 9 A 339 LYS PHE PHE ALA ALA HIS SER LEU THR ASN SER VAL ILE SEQRES 10 A 339 SER GLY LEU LYS ILE VAL ASN SER PRO VAL GLN VAL PHE SEQRES 11 A 339 SER VAL ALA GLY SER ASP TYR LEU THR LEU LYS ASP ILE SEQRES 12 A 339 THR ILE ASP ASN SER ASP GLY ASP ASP ASN GLY GLY HIS SEQRES 13 A 339 ASN THR ASP ALA PHE ASP ILE GLY THR SER THR TYR VAL SEQRES 14 A 339 THR ILE SER GLY ALA THR VAL TYR ASN GLN ASP ASP CYS SEQRES 15 A 339 VAL ALA VAL ASN SER GLY GLU ASN ILE TYR PHE SER GLY SEQRES 16 A 339 GLY TYR CYS SER GLY GLY HIS GLY LEU SER ILE GLY SER SEQRES 17 A 339 VAL GLY GLY ARG SER ASP ASN THR VAL LYS ASN VAL THR SEQRES 18 A 339 PHE VAL ASP SER THR ILE ILE ASN SER ASP ASN GLY VAL SEQRES 19 A 339 ARG ILE LYS THR ASN ILE ASP THR THR GLY SER VAL SER SEQRES 20 A 339 ASP VAL THR TYR LYS ASP ILE THR LEU THR SER ILE ALA SEQRES 21 A 339 LYS TYR GLY ILE VAL VAL GLN GLN ASN TYR GLY ASP THR SEQRES 22 A 339 SER SER THR PRO THR THR GLY VAL PRO ILE THR ASP PHE SEQRES 23 A 339 VAL LEU ASP ASN VAL HIS GLY SER VAL VAL SER SER GLY SEQRES 24 A 339 THR ASN ILE LEU ILE SER CYS GLY SER GLY SER CYS SER SEQRES 25 A 339 ASP TRP THR TRP THR ASP VAL SER VAL SER GLY GLY LYS SEQRES 26 A 339 THR SER SER LYS CYS THR ASN VAL PRO SER GLY ALA SER SEQRES 27 A 339 CYS SEQRES 1 B 339 ALA THR THR CYS THR PHE SER GLY SER ASN GLY ALA SER SEQRES 2 B 339 SER ALA SER LYS SER LYS THR SER CYS SER THR ILE VAL SEQRES 3 B 339 LEU SER ASN VAL ALA VAL PRO SER GLY THR THR LEU ASP SEQRES 4 B 339 LEU THR LYS LEU ASN ASP GLY THR HIS VAL ILE PHE SER SEQRES 5 B 339 GLY GLU THR THR PHE GLY TYR LYS GLU TRP SER GLY PRO SEQRES 6 B 339 LEU ILE SER VAL SER GLY SER ASP LEU THR ILE THR GLY SEQRES 7 B 339 ALA SER GLY HIS SER ILE ASN GLY ASP GLY SER ARG TRP SEQRES 8 B 339 TRP ASP GLY GLU GLY GLY ASN GLY GLY LYS THR LYS PRO SEQRES 9 B 339 LYS PHE PHE ALA ALA HIS SER LEU THR ASN SER VAL ILE SEQRES 10 B 339 SER GLY LEU LYS ILE VAL ASN SER PRO VAL GLN VAL PHE SEQRES 11 B 339 SER VAL ALA GLY SER ASP TYR LEU THR LEU LYS ASP ILE SEQRES 12 B 339 THR ILE ASP ASN SER ASP GLY ASP ASP ASN GLY GLY HIS SEQRES 13 B 339 ASN THR ASP ALA PHE ASP ILE GLY THR SER THR TYR VAL SEQRES 14 B 339 THR ILE SER GLY ALA THR VAL TYR ASN GLN ASP ASP CYS SEQRES 15 B 339 VAL ALA VAL ASN SER GLY GLU ASN ILE TYR PHE SER GLY SEQRES 16 B 339 GLY TYR CYS SER GLY GLY HIS GLY LEU SER ILE GLY SER SEQRES 17 B 339 VAL GLY GLY ARG SER ASP ASN THR VAL LYS ASN VAL THR SEQRES 18 B 339 PHE VAL ASP SER THR ILE ILE ASN SER ASP ASN GLY VAL SEQRES 19 B 339 ARG ILE LYS THR ASN ILE ASP THR THR GLY SER VAL SER SEQRES 20 B 339 ASP VAL THR TYR LYS ASP ILE THR LEU THR SER ILE ALA SEQRES 21 B 339 LYS TYR GLY ILE VAL VAL GLN GLN ASN TYR GLY ASP THR SEQRES 22 B 339 SER SER THR PRO THR THR GLY VAL PRO ILE THR ASP PHE SEQRES 23 B 339 VAL LEU ASP ASN VAL HIS GLY SER VAL VAL SER SER GLY SEQRES 24 B 339 THR ASN ILE LEU ILE SER CYS GLY SER GLY SER CYS SER SEQRES 25 B 339 ASP TRP THR TRP THR ASP VAL SER VAL SER GLY GLY LYS SEQRES 26 B 339 THR SER SER LYS CYS THR ASN VAL PRO SER GLY ALA SER SEQRES 27 B 339 CYS MODRES 1IB4 THR A 5 THR GLYCOSYLATION SITE MODRES 1IB4 SER A 7 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 9 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 13 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 14 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 16 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 18 SER GLYCOSYLATION SITE MODRES 1IB4 SER A 23 SER GLYCOSYLATION SITE MODRES 1IB4 THR A 24 THR GLYCOSYLATION SITE MODRES 1IB4 SER A 34 SER GLYCOSYLATION SITE MODRES 1IB4 THR B 5 THR GLYCOSYLATION SITE MODRES 1IB4 SER B 7 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 9 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 13 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 14 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 16 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 18 SER GLYCOSYLATION SITE MODRES 1IB4 SER B 23 SER GLYCOSYLATION SITE MODRES 1IB4 THR B 24 THR GLYCOSYLATION SITE MODRES 1IB4 SER B 34 SER GLYCOSYLATION SITE MODRES 1IB4 ASN B 219 ASN GLYCOSYLATION SITE MODRES 1IB4 ASN A 219 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN A 405 11 HET MAN A 407 11 HET MAN A 409 11 HET MAN A 413 11 HET MAN A 414 11 HET MAN A 416 11 HET MAN A 418 11 HET MAN A 423 11 HET MAN A 424 11 HET MAN A 434 11 HET MAN B 405 11 HET MAN B 407 11 HET MAN B 409 11 HET MAN B 413 11 HET MAN B 414 11 HET MAN B 416 11 HET MAN B 418 11 HET MAN B 423 11 HET MAN B 424 11 HET MAN B 434 11 HET CD B 935 1 HET CD B 936 1 HET CD B 937 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CD CADMIUM ION FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 MAN 22(C6 H12 O6) FORMUL 25 CD 3(CD 2+) FORMUL 28 HOH *425(H2 O) HELIX 1 1 ASN A 10 LYS A 19 1 10 HELIX 2 2 THR A 20 CYS A 22 5 3 HELIX 3 3 ASP A 87 TRP A 91 5 5 HELIX 4 4 GLU A 95 GLY A 99 5 5 HELIX 5 5 SER A 148 ASP A 151 5 4 HELIX 6 6 ASN B 10 LYS B 19 1 10 HELIX 7 7 THR B 20 CYS B 22 5 3 HELIX 8 8 ASP B 87 TRP B 91 5 5 HELIX 9 9 GLU B 95 GLY B 99 5 5 HELIX 10 10 SER B 148 ASP B 151 5 4 SHEET 1 A40 THR A 3 GLY A 8 0 SHEET 2 A40 THR A 24 VAL A 32 1 O THR A 24 N CYS A 4 SHEET 3 A40 HIS A 48 SER A 52 1 O HIS A 48 N ILE A 25 SHEET 4 A40 THR A 75 GLY A 78 1 O THR A 75 N VAL A 49 SHEET 5 A40 PHE A 107 SER A 118 1 O VAL A 116 N ILE A 76 SHEET 6 A40 ILE A 67 SER A 72 1 O ILE A 67 N ALA A 108 SHEET 7 A40 LEU A 38 LEU A 40 1 O LEU A 38 N SER A 68 SHEET 8 A40 ILE A 67 SER A 72 1 O SER A 68 N LEU A 40 SHEET 9 A40 PHE A 107 SER A 118 1 N ALA A 108 O ILE A 67 SHEET 10 A40 PHE A 130 ALA A 133 1 N SER A 131 O PHE A 107 SHEET 11 A40 PHE A 161 ILE A 163 1 N ASP A 162 O PHE A 130 SHEET 12 A40 VAL A 183 VAL A 185 1 O ALA A 184 N ILE A 163 SHEET 13 A40 LEU A 204 VAL A 209 1 N SER A 205 O VAL A 183 SHEET 14 A40 ASN A 232 ASN A 239 1 O GLY A 233 N LEU A 204 SHEET 15 A40 TYR A 262 TYR A 270 1 O TYR A 262 N GLY A 233 SHEET 16 A40 THR A 300 SER A 305 1 O THR A 300 N GLY A 263 SHEET 17 A40 TYR A 262 TYR A 270 1 N GLY A 263 O THR A 300 SHEET 18 A40 ASN A 232 ASN A 239 1 N GLY A 233 O TYR A 262 SHEET 19 A40 LEU A 204 VAL A 209 1 N LEU A 204 O GLY A 233 SHEET 20 A40 VAL A 183 VAL A 185 1 O VAL A 183 N SER A 205 SHEET 21 A40 PHE A 161 ILE A 163 1 O PHE A 161 N ALA A 184 SHEET 22 A40 PHE A 130 ALA A 133 1 O PHE A 130 N ASP A 162 SHEET 23 A40 PHE A 107 SER A 118 1 O PHE A 107 N SER A 131 SHEET 24 A40 ASP A 136 LYS A 141 1 N ASP A 136 O LEU A 112 SHEET 25 A40 THR A 167 SER A 172 1 O THR A 167 N TYR A 137 SHEET 26 A40 GLY A 188 SER A 194 1 O GLU A 189 N TYR A 168 SHEET 27 A40 THR A 216 ILE A 228 1 O THR A 216 N GLY A 188 SHEET 28 A40 SER A 245 ILE A 259 1 O SER A 245 N VAL A 217 SHEET 29 A40 ILE A 283 VAL A 295 1 N THR A 284 O VAL A 246 SHEET 30 A40 CYS A 311 SER A 322 1 N SER A 312 O ILE A 283 SHEET 31 A40 ILE A 283 VAL A 295 1 O ILE A 283 N SER A 312 SHEET 32 A40 SER A 245 ILE A 259 1 O VAL A 246 N THR A 284 SHEET 33 A40 THR A 216 ILE A 228 1 N VAL A 217 O SER A 245 SHEET 34 A40 TYR A 197 SER A 199 1 N CYS A 198 O THR A 226 SHEET 35 A40 THR A 175 TYR A 177 1 O VAL A 176 N SER A 199 SHEET 36 A40 THR A 144 ASP A 146 1 N ILE A 145 O THR A 175 SHEET 37 A40 LYS A 121 VAL A 123 1 N ILE A 122 O THR A 144 SHEET 38 A40 SER A 83 ASN A 85 1 N ILE A 84 O LYS A 121 SHEET 39 A40 GLU A 54 PHE A 57 1 N THR A 55 O SER A 83 SHEET 40 A40 THR A 24 VAL A 32 1 O VAL A 30 N THR A 56 SHEET 1 B38 THR B 3 GLY B 8 0 SHEET 2 B38 THR B 24 VAL B 32 1 O THR B 24 N CYS B 4 SHEET 3 B38 HIS B 48 SER B 52 1 O HIS B 48 N ILE B 25 SHEET 4 B38 THR B 75 GLY B 78 1 O THR B 75 N VAL B 49 SHEET 5 B38 PHE B 107 SER B 118 1 O VAL B 116 N ILE B 76 SHEET 6 B38 ILE B 67 SER B 72 1 O ILE B 67 N ALA B 108 SHEET 7 B38 LEU B 38 LEU B 40 1 O LEU B 38 N SER B 68 SHEET 8 B38 ILE B 67 SER B 72 1 O SER B 68 N LEU B 40 SHEET 9 B38 PHE B 107 SER B 118 1 N ALA B 108 O ILE B 67 SHEET 10 B38 ASP B 136 LYS B 141 1 N ASP B 136 O LEU B 112 SHEET 11 B38 THR B 167 SER B 172 1 O THR B 167 N TYR B 137 SHEET 12 B38 GLY B 188 SER B 194 1 O GLU B 189 N TYR B 168 SHEET 13 B38 THR B 216 ILE B 228 1 O THR B 216 N GLY B 188 SHEET 14 B38 SER B 245 ILE B 259 1 O SER B 245 N VAL B 217 SHEET 15 B38 ILE B 283 VAL B 295 1 N THR B 284 O VAL B 246 SHEET 16 B38 CYS B 311 THR B 317 1 N SER B 312 O ILE B 283 SHEET 17 B38 ILE B 283 VAL B 295 1 O ILE B 283 N SER B 312 SHEET 18 B38 SER B 320 SER B 322 1 N SER B 320 O VAL B 291 SHEET 19 B38 ILE B 283 VAL B 295 1 O VAL B 291 N SER B 320 SHEET 20 B38 SER B 245 ILE B 259 1 O VAL B 246 N THR B 284 SHEET 21 B38 THR B 216 ILE B 228 1 N VAL B 217 O SER B 245 SHEET 22 B38 TYR B 197 SER B 199 1 O CYS B 198 N ILE B 228 SHEET 23 B38 THR B 175 TYR B 177 1 N VAL B 176 O TYR B 197 SHEET 24 B38 THR B 144 ASP B 146 1 N ILE B 145 O THR B 175 SHEET 25 B38 LYS B 121 VAL B 123 1 N ILE B 122 O THR B 144 SHEET 26 B38 SER B 83 ASN B 85 1 O ILE B 84 N VAL B 123 SHEET 27 B38 GLU B 54 PHE B 57 1 N THR B 55 O SER B 83 SHEET 28 B38 THR B 24 VAL B 32 1 O VAL B 30 N THR B 56 SHEET 29 B38 HIS B 48 SER B 52 1 O HIS B 48 N ILE B 25 SHEET 30 B38 THR B 75 GLY B 78 1 O THR B 75 N VAL B 49 SHEET 31 B38 PHE B 107 SER B 118 1 O VAL B 116 N ILE B 76 SHEET 32 B38 PHE B 130 ALA B 133 1 N SER B 131 O PHE B 107 SHEET 33 B38 PHE B 161 ILE B 163 1 O ASP B 162 N VAL B 132 SHEET 34 B38 VAL B 183 VAL B 185 1 O ALA B 184 N ILE B 163 SHEET 35 B38 LEU B 204 VAL B 209 1 N SER B 205 O VAL B 183 SHEET 36 B38 ASN B 232 ASN B 239 1 O GLY B 233 N LEU B 204 SHEET 37 B38 TYR B 262 TYR B 270 1 O TYR B 262 N GLY B 233 SHEET 38 B38 THR B 300 SER B 305 1 O THR B 300 N GLY B 263 SSBOND 1 CYS A 4 CYS A 22 1555 1555 2.03 SSBOND 2 CYS A 182 CYS A 198 1555 1555 2.02 SSBOND 3 CYS A 306 CYS A 311 1555 1555 2.04 SSBOND 4 CYS A 330 CYS A 339 1555 1555 2.03 SSBOND 5 CYS B 4 CYS B 22 1555 1555 2.02 SSBOND 6 CYS B 182 CYS B 198 1555 1555 2.01 SSBOND 7 CYS B 306 CYS B 311 1555 1555 2.13 SSBOND 8 CYS B 330 CYS B 339 1555 1555 1.95 LINK OG1 THR A 5 C1 MAN A 405 1555 1555 1.39 LINK OG SER A 7 C1 MAN A 407 1555 1555 1.39 LINK OG SER A 9 C1 MAN A 409 1555 1555 1.40 LINK OG SER A 13 C1 MAN A 413 1555 1555 1.39 LINK OG SER A 14 C1 MAN A 414 1555 1555 1.39 LINK OG SER A 16 C1 MAN A 416 1555 1555 1.39 LINK OG SER A 18 C1 MAN A 418 1555 1555 1.39 LINK OG SER A 23 C1 MAN A 423 1555 1555 1.40 LINK OG1 THR A 24 C1 MAN A 424 1555 1555 1.40 LINK OG SER A 34 C1 MAN A 434 1555 1555 1.39 LINK ND2 ASN A 219 C1 NAG C 1 1555 1555 1.45 LINK OG1 THR B 5 C1 MAN B 405 1555 1555 1.40 LINK OG SER B 7 C1 MAN B 407 1555 1555 1.39 LINK OG SER B 9 C1 MAN B 409 1555 1555 1.41 LINK OG SER B 13 C1 MAN B 413 1555 1555 1.44 LINK OG SER B 14 C1 MAN B 414 1555 1555 1.40 LINK OG SER B 16 C1 MAN B 416 1555 1555 1.48 LINK OG SER B 18 C1 MAN B 418 1555 1555 1.39 LINK OG SER B 23 C1 MAN B 423 1555 1555 1.40 LINK OG1 THR B 24 C1 MAN B 424 1555 1555 1.40 LINK OG SER B 34 C1 MAN B 434 1555 1555 1.38 LINK ND2 ASN B 219 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.37 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.64 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.56 LINK OE2 GLU A 95 CD CD B 936 1555 1555 2.25 LINK OE1 GLU A 95 CD CD B 936 1555 1555 2.60 LINK NE2 HIS A 202 CD CD B 935 1555 1555 2.32 LINK OD1 ASP A 231 CD CD B 935 1555 1555 2.58 LINK OE2 GLU B 95 CD CD B 935 1555 1555 1.91 LINK OE1 GLU B 95 CD CD B 935 1555 1555 2.67 LINK NE2 HIS B 202 CD CD B 936 1555 1555 2.52 LINK OD1 ASP B 231 CD CD B 936 1555 1555 2.72 LINK OD2 ASP B 285 CD CD B 937 1555 1555 2.41 LINK OD2 ASP B 313 CD CD B 937 1555 1555 2.36 LINK CD CD B 936 O HOH B1309 1555 1555 1.72 CISPEP 1 GLY A 64 PRO A 65 0 3.54 CISPEP 2 GLY A 207 SER A 208 0 4.42 CISPEP 3 GLY B 64 PRO B 65 0 7.98 CISPEP 4 GLY B 207 SER B 208 0 -2.07 CRYST1 56.100 96.400 57.770 90.00 107.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017825 0.000000 0.005552 0.00000 SCALE2 0.000000 0.010373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018130 0.00000