HEADER HYDROLASE 28-MAR-01 1IBQ TITLE ASPERGILLOPEPSIN FROM ASPERGILLUS PHOENICIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPERGILLOPEPSIN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.23.18 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS PHOENICIS; SOURCE 3 ORGANISM_TAXID: 5063 KEYWDS ASPERGILLOPEPSIN, ASPARTIC PROTEINASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.CHO,W.SHIN REVDAT 4 29-JUL-20 1IBQ 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 04-OCT-17 1IBQ 1 REMARK REVDAT 2 24-FEB-09 1IBQ 1 VERSN REVDAT 1 04-JUL-01 1IBQ 0 JRNL AUTH S.W.CHO,N.KIM,M.U.CHOI,W.SHIN JRNL TITL STRUCTURE OF ASPERGILLOPEPSIN I FROM ASPERGILLUS PHOENICIS: JRNL TITL 2 VARIATIONS OF THE S1'-S2 SUBSITE IN ASPARTIC PROTEINASES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 948 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11418762 JRNL DOI 10.1107/S0907444901005972 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 25074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1220 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4834 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 4.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.41 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-APR-01. REMARK 100 THE DEPOSITION ID IS D_1000013135. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-99 REMARK 200 TEMPERATURE (KELVIN) : 290 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS FAST REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MADNESS REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26402 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 26.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG8000, 0.1M SODIUM CACODYLATE, REMARK 280 0.2M ZINC ACETATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 18.31000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1166 O HOH B 1211 2.16 REMARK 500 O HOH B 1120 O HOH B 1167 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 133 CA PRO A 133 CB 0.279 REMARK 500 PRO A 133 CD PRO A 133 N 0.298 REMARK 500 PRO A 133 CA PRO A 133 C -0.169 REMARK 500 PRO A 133 C PRO A 133 O 0.142 REMARK 500 GLU A 242 CD GLU A 242 OE1 0.114 REMARK 500 PRO A 317 CB PRO A 317 CG -0.368 REMARK 500 PRO A 317 CG PRO A 317 CD 0.228 REMARK 500 ALA A 325 C ALA A 325 OXT 0.233 REMARK 500 PRO B 133 CA PRO B 133 CB 0.120 REMARK 500 PRO B 317 CA PRO B 317 CB -0.117 REMARK 500 ALA B 325 C ALA B 325 OXT 0.567 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 133 N - CA - CB ANGL. DEV. = -8.2 DEGREES REMARK 500 PRO A 133 N - CD - CG ANGL. DEV. = -9.5 DEGREES REMARK 500 GLU B 110 OE1 - CD - OE2 ANGL. DEV. = -8.2 DEGREES REMARK 500 PRO B 133 CA - CB - CG ANGL. DEV. = -12.6 DEGREES REMARK 500 PRO B 133 N - CD - CG ANGL. DEV. = -11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 -109.11 51.51 REMARK 500 ASN A 12 53.34 -99.51 REMARK 500 GLU A 15 116.76 -166.57 REMARK 500 TYR A 74 -167.78 -120.27 REMARK 500 ALA A 80 138.56 -174.86 REMARK 500 LYS A 106 120.33 -173.53 REMARK 500 ASP A 114 69.70 -104.23 REMARK 500 ALA A 116 -55.35 99.01 REMARK 500 SER A 240 89.58 -61.98 REMARK 500 ALA A 243 -14.79 -164.44 REMARK 500 TYR A 275 -82.10 -49.24 REMARK 500 ASN B 11 134.10 -176.97 REMARK 500 SER B 109 -38.92 -29.61 REMARK 500 ASP B 114 72.72 -64.81 REMARK 500 ALA B 116 -43.28 84.54 REMARK 500 TYR B 275 -72.43 -65.54 REMARK 500 THR B 280 98.55 -46.29 REMARK 500 LEU B 295 -1.02 -146.68 REMARK 500 ASP B 302 -68.91 74.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1451 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 1 N REMARK 620 2 ASP A 148 OD1 74.2 REMARK 620 3 ASP A 148 OD2 120.0 54.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1455 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 28 ND1 REMARK 620 2 ASP A 54 OD2 115.3 REMARK 620 3 ASP A 118 OD1 123.3 87.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1457 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 32 OD1 REMARK 620 2 ASP A 32 OD2 58.7 REMARK 620 3 ASP A 214 OD1 68.4 117.5 REMARK 620 4 ASP A 214 OD2 124.8 159.3 57.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1453 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 256 OD2 REMARK 620 2 ASP A 256 OD1 54.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1454 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 1 N REMARK 620 2 ASP B 148 OD2 86.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1452 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 28 ND1 REMARK 620 2 ASP B 54 OD1 138.5 REMARK 620 3 ASP B 118 OD2 114.7 91.1 REMARK 620 4 HOH B1120 O 119.7 76.4 109.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1458 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 32 OD2 REMARK 620 2 ASP B 32 OD1 54.4 REMARK 620 3 ASP B 214 OD1 170.9 122.9 REMARK 620 4 ASP B 214 OD2 115.6 61.4 61.7 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3APP RELATED DB: PDB REMARK 900 3APP CONTAINS ACID PROTEINASE (PENICILLOPEPSIN). REMARK 900 RELATED ID: 4APE RELATED DB: PDB REMARK 900 4APE CONTAINS ACID PROTEINASE (ENDOTHIAPEPSIN). REMARK 900 RELATED ID: 2APR RELATED DB: PDB REMARK 900 2APR CONTAINS ACID PROTEINASE (RHIZOPUSPEPSIN). REMARK 900 RELATED ID: 1PSN RELATED DB: PDB REMARK 900 1PSN CONTAINS PEPSIN 3A. REMARK 900 RELATED ID: 1EAG RELATED DB: PDB REMARK 900 1EAG CONTAINS ASPARTIC PROTEINASE (SAP2) FROM CANDIDA ALBICANS. REMARK 900 RELATED ID: 1MPP RELATED DB: PDB REMARK 900 1MPP CONTAINS PEPSIN (RENIN). DBREF 1IBQ A 1 325 UNP Q12567 PEPA_ASPSA 70 394 DBREF 1IBQ B 1 325 UNP Q12567 PEPA_ASPSA 70 394 SEQRES 1 A 325 SER LYS GLY SER ALA VAL THR THR PRO GLN ASN ASN ASP SEQRES 2 A 325 GLU GLU TYR LEU THR PRO VAL THR VAL GLY LYS SER THR SEQRES 3 A 325 LEU HIS LEU ASP PHE ASP THR GLY SER ALA ASP LEU TRP SEQRES 4 A 325 VAL PHE SER ASP GLU LEU PRO SER SER GLU GLN THR GLY SEQRES 5 A 325 HIS ASP LEU TYR THR PRO SER SER SER ALA THR LYS LEU SEQRES 6 A 325 SER GLY TYR SER TRP ASP ILE SER TYR GLY ASP GLY SER SEQRES 7 A 325 SER ALA SER GLY ASP VAL TYR ARG ASP THR VAL THR VAL SEQRES 8 A 325 GLY GLY VAL THR THR ASN LYS GLN ALA VAL GLU ALA ALA SEQRES 9 A 325 SER LYS ILE SER SER GLU PHE VAL GLN ASP THR ALA ASN SEQRES 10 A 325 ASP GLY LEU LEU GLY LEU ALA PHE SER SER ILE ASN THR SEQRES 11 A 325 VAL GLN PRO LYS ALA GLN THR THR PHE PHE ASP THR VAL SEQRES 12 A 325 LYS SER GLN LEU ASP SER PRO LEU PHE ALA VAL GLN LEU SEQRES 13 A 325 LYS HIS ASP ALA PRO GLY VAL TYR ASP PHE GLY TYR ILE SEQRES 14 A 325 ASP ASP SER LYS TYR THR GLY SER ILE THR TYR THR ASP SEQRES 15 A 325 ALA ASP SER SER GLN GLY TYR TRP GLY PHE SER THR ASP SEQRES 16 A 325 GLY TYR SER ILE GLY ASP GLY SER SER SER SER SER GLY SEQRES 17 A 325 PHE SER ALA ILE ALA ASP THR GLY THR THR LEU ILE LEU SEQRES 18 A 325 LEU ASP ASP GLU ILE VAL SER ALA TYR TYR GLU GLN VAL SEQRES 19 A 325 SER GLY ALA GLN GLU SER TYR GLU ALA GLY GLY TYR VAL SEQRES 20 A 325 PHE SER CYS SER THR ASP LEU PRO ASP PHE THR VAL VAL SEQRES 21 A 325 ILE GLY ASP TYR LYS ALA VAL VAL PRO GLY LYS TYR ILE SEQRES 22 A 325 ASN TYR ALA PRO VAL SER THR GLY SER SER THR CYS TYR SEQRES 23 A 325 GLY GLY ILE GLN SER ASN SER GLY LEU GLY LEU SER ILE SEQRES 24 A 325 LEU GLY ASP VAL PHE LEU LYS SER GLN TYR VAL VAL PHE SEQRES 25 A 325 ASN SER GLU GLY PRO LYS LEU GLY PHE ALA ALA GLN ALA SEQRES 1 B 325 SER LYS GLY SER ALA VAL THR THR PRO GLN ASN ASN ASP SEQRES 2 B 325 GLU GLU TYR LEU THR PRO VAL THR VAL GLY LYS SER THR SEQRES 3 B 325 LEU HIS LEU ASP PHE ASP THR GLY SER ALA ASP LEU TRP SEQRES 4 B 325 VAL PHE SER ASP GLU LEU PRO SER SER GLU GLN THR GLY SEQRES 5 B 325 HIS ASP LEU TYR THR PRO SER SER SER ALA THR LYS LEU SEQRES 6 B 325 SER GLY TYR SER TRP ASP ILE SER TYR GLY ASP GLY SER SEQRES 7 B 325 SER ALA SER GLY ASP VAL TYR ARG ASP THR VAL THR VAL SEQRES 8 B 325 GLY GLY VAL THR THR ASN LYS GLN ALA VAL GLU ALA ALA SEQRES 9 B 325 SER LYS ILE SER SER GLU PHE VAL GLN ASP THR ALA ASN SEQRES 10 B 325 ASP GLY LEU LEU GLY LEU ALA PHE SER SER ILE ASN THR SEQRES 11 B 325 VAL GLN PRO LYS ALA GLN THR THR PHE PHE ASP THR VAL SEQRES 12 B 325 LYS SER GLN LEU ASP SER PRO LEU PHE ALA VAL GLN LEU SEQRES 13 B 325 LYS HIS ASP ALA PRO GLY VAL TYR ASP PHE GLY TYR ILE SEQRES 14 B 325 ASP ASP SER LYS TYR THR GLY SER ILE THR TYR THR ASP SEQRES 15 B 325 ALA ASP SER SER GLN GLY TYR TRP GLY PHE SER THR ASP SEQRES 16 B 325 GLY TYR SER ILE GLY ASP GLY SER SER SER SER SER GLY SEQRES 17 B 325 PHE SER ALA ILE ALA ASP THR GLY THR THR LEU ILE LEU SEQRES 18 B 325 LEU ASP ASP GLU ILE VAL SER ALA TYR TYR GLU GLN VAL SEQRES 19 B 325 SER GLY ALA GLN GLU SER TYR GLU ALA GLY GLY TYR VAL SEQRES 20 B 325 PHE SER CYS SER THR ASP LEU PRO ASP PHE THR VAL VAL SEQRES 21 B 325 ILE GLY ASP TYR LYS ALA VAL VAL PRO GLY LYS TYR ILE SEQRES 22 B 325 ASN TYR ALA PRO VAL SER THR GLY SER SER THR CYS TYR SEQRES 23 B 325 GLY GLY ILE GLN SER ASN SER GLY LEU GLY LEU SER ILE SEQRES 24 B 325 LEU GLY ASP VAL PHE LEU LYS SER GLN TYR VAL VAL PHE SEQRES 25 B 325 ASN SER GLU GLY PRO LYS LEU GLY PHE ALA ALA GLN ALA MODRES 1IBQ SER B 235 SER GLYCOSYLATION SITE MODRES 1IBQ SER A 235 SER GLYCOSYLATION SITE MODRES 1IBQ SER A 60 SER GLYCOSYLATION SITE MODRES 1IBQ SER B 60 SER GLYCOSYLATION SITE HET MAN A 435 11 HET MAN A 460 11 HET ZN A1451 1 HET ZN A1453 1 HET ZN A1455 1 HET ZN A1457 1 HET MAN B 935 11 HET MAN B 960 11 HET ZN B1452 1 HET ZN B1454 1 HET ZN B1456 1 HET ZN B1458 1 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM ZN ZINC ION FORMUL 3 MAN 4(C6 H12 O6) FORMUL 5 ZN 8(ZN 2+) FORMUL 15 HOH *286(H2 O) HELIX 1 1 PRO A 46 THR A 51 1 6 HELIX 2 2 SER A 108 GLN A 113 1 6 HELIX 3 3 PHE A 125 ASN A 129 5 5 HELIX 4 4 THR A 138 LYS A 144 1 7 HELIX 5 5 SER A 145 LEU A 147 5 3 HELIX 6 6 ASP A 170 LYS A 173 5 4 HELIX 7 7 ASP A 223 GLU A 232 1 10 HELIX 8 8 PRO A 269 ILE A 273 1 5 HELIX 9 9 GLY A 301 LYS A 306 1 6 HELIX 10 10 PRO B 46 GLN B 50 5 5 HELIX 11 11 SER B 108 ASP B 114 1 7 HELIX 12 12 PHE B 125 ASN B 129 5 5 HELIX 13 13 THR B 138 LYS B 144 1 7 HELIX 14 14 SER B 145 LEU B 147 5 3 HELIX 15 15 ASP B 223 GLU B 232 1 10 HELIX 16 16 PRO B 269 ILE B 273 1 5 HELIX 17 17 PHE B 304 LYS B 306 5 3 SHEET 1 A17 THR A 63 LYS A 64 0 SHEET 2 A17 SER A 79 VAL A 91 -1 N ARG A 86 O THR A 63 SHEET 3 A17 TRP A 70 SER A 73 -1 N TRP A 70 O GLY A 82 SHEET 4 A17 SER A 79 VAL A 91 -1 O ALA A 80 N ILE A 72 SHEET 5 A17 VAL A 94 ILE A 107 -1 O VAL A 94 N VAL A 91 SHEET 6 A17 LEU A 38 PHE A 41 1 O LEU A 38 N GLU A 102 SHEET 7 A17 GLY A 119 GLY A 122 -1 N LEU A 120 O TRP A 39 SHEET 8 A17 SER A 25 ASP A 32 1 O ASP A 30 N LEU A 121 SHEET 9 A17 TYR A 16 VAL A 22 -1 O TYR A 16 N PHE A 31 SHEET 10 A17 SER A 79 VAL A 91 -1 O THR A 90 N THR A 21 SHEET 11 A17 TYR A 16 VAL A 22 -1 N THR A 21 O THR A 90 SHEET 12 A17 GLY A 3 PRO A 9 -1 O THR A 8 N LEU A 17 SHEET 13 A17 ALA A 160 PHE A 166 -1 N GLY A 162 O THR A 7 SHEET 14 A17 LEU A 151 LYS A 157 -1 O ALA A 153 N ASP A 165 SHEET 15 A17 GLN A 308 ASN A 313 -1 O VAL A 310 N VAL A 154 SHEET 16 A17 LYS A 318 ALA A 323 -1 O LYS A 318 N ASN A 313 SHEET 17 A17 THR A 179 ASP A 182 -1 N THR A 179 O PHE A 321 SHEET 1 B 5 GLY A 191 THR A 194 0 SHEET 2 B 5 PHE A 209 ALA A 213 -1 N PHE A 209 O THR A 194 SHEET 3 B 5 SER A 298 LEU A 300 1 O SER A 298 N ILE A 212 SHEET 4 B 5 ILE A 220 LEU A 222 -1 O LEU A 221 N ILE A 299 SHEET 5 B 5 ILE A 289 SER A 291 1 O GLN A 290 N LEU A 222 SHEET 1 C 3 GLY A 196 ILE A 199 0 SHEET 2 C 3 PHE A 257 ILE A 261 -1 N THR A 258 O SER A 198 SHEET 3 C 3 TYR A 264 VAL A 268 -1 O TYR A 264 N ILE A 261 SHEET 1 D 3 VAL A 247 SER A 249 0 SHEET 2 D 3 THR A 284 GLY A 287 -1 N CYS A 285 O PHE A 248 SHEET 3 D 3 ASN A 274 PRO A 277 -1 N TYR A 275 O TYR A 286 SHEET 1 E 6 GLY B 3 THR B 7 0 SHEET 2 E 6 ALA B 160 PHE B 166 -1 N GLY B 162 O THR B 7 SHEET 3 E 6 LEU B 151 LYS B 157 -1 N ALA B 153 O ASP B 165 SHEET 4 E 6 GLN B 308 ASN B 313 -1 O VAL B 310 N VAL B 154 SHEET 5 E 6 LYS B 318 ALA B 323 -1 N LYS B 318 O ASN B 313 SHEET 6 E 6 THR B 179 ASP B 182 -1 N THR B 179 O PHE B 321 SHEET 1 F10 THR B 63 LYS B 64 0 SHEET 2 F10 ALA B 80 VAL B 91 -1 N ARG B 86 O THR B 63 SHEET 3 F10 TRP B 70 ASP B 71 -1 O TRP B 70 N GLY B 82 SHEET 4 F10 ALA B 80 VAL B 91 -1 N GLY B 82 O TRP B 70 SHEET 5 F10 VAL B 94 ILE B 107 -1 O VAL B 94 N VAL B 91 SHEET 6 F10 LEU B 38 VAL B 40 1 O LEU B 38 N GLU B 102 SHEET 7 F10 GLY B 119 GLY B 122 -1 N LEU B 120 O TRP B 39 SHEET 8 F10 SER B 25 ASP B 32 1 N ASP B 30 O GLY B 119 SHEET 9 F10 LEU B 17 VAL B 22 -1 O THR B 18 N LEU B 29 SHEET 10 F10 ALA B 80 VAL B 91 -1 N THR B 90 O THR B 21 SHEET 1 G 5 GLY B 191 THR B 194 0 SHEET 2 G 5 PHE B 209 ALA B 213 -1 N PHE B 209 O THR B 194 SHEET 3 G 5 SER B 298 LEU B 300 1 O SER B 298 N ILE B 212 SHEET 4 G 5 ILE B 220 LEU B 222 -1 O LEU B 221 N ILE B 299 SHEET 5 G 5 ILE B 289 SER B 291 1 N GLN B 290 O ILE B 220 SHEET 1 H 3 GLY B 196 ILE B 199 0 SHEET 2 H 3 PHE B 257 ILE B 261 -1 N THR B 258 O SER B 198 SHEET 3 H 3 TYR B 264 VAL B 268 -1 O TYR B 264 N ILE B 261 SHEET 1 I 4 GLN B 238 SER B 240 0 SHEET 2 I 4 GLY B 245 SER B 249 -1 N GLY B 245 O SER B 240 SHEET 3 I 4 THR B 284 GLY B 287 -1 N CYS B 285 O PHE B 248 SHEET 4 I 4 ASN B 274 PRO B 277 -1 N TYR B 275 O TYR B 286 SSBOND 1 CYS A 250 CYS A 285 1555 1555 2.03 SSBOND 2 CYS B 250 CYS B 285 1555 1555 2.03 LINK OG SER A 60 C1 MAN A 460 1555 1555 1.40 LINK OG SER A 235 C1 MAN A 435 1555 1555 1.40 LINK OG SER B 60 C1 MAN B 960 1555 1555 1.40 LINK OG SER B 235 C1 MAN B 935 1555 1555 1.39 LINK N SER A 1 ZN ZN A1451 1555 1555 2.21 LINK ND1 HIS A 28 ZN ZN A1455 1555 1555 2.36 LINK OD1 ASP A 32 ZN ZN A1457 1555 1555 2.04 LINK OD2 ASP A 32 ZN ZN A1457 1555 1555 2.39 LINK OD2 ASP A 54 ZN ZN A1455 1555 1555 1.93 LINK OD1 ASP A 118 ZN ZN A1455 1555 1555 2.27 LINK OD1 ASP A 148 ZN ZN A1451 1555 1555 2.18 LINK OD2 ASP A 148 ZN ZN A1451 1555 1555 2.56 LINK OD1 ASP A 214 ZN ZN A1457 1555 1555 2.16 LINK OD2 ASP A 214 ZN ZN A1457 1555 1555 2.35 LINK OD2 ASP A 256 ZN ZN A1453 1555 1555 2.20 LINK OD1 ASP A 256 ZN ZN A1453 1555 1555 2.54 LINK N SER B 1 ZN ZN B1454 1555 1555 1.91 LINK ND1 HIS B 28 ZN ZN B1452 1555 1555 2.37 LINK OD2 ASP B 32 ZN ZN B1458 1555 1555 2.56 LINK OD1 ASP B 32 ZN ZN B1458 1555 1555 2.22 LINK OD1 ASP B 54 ZN ZN B1452 1555 1555 1.90 LINK OD2 ASP B 118 ZN ZN B1452 1555 1555 2.24 LINK OD2 ASP B 148 ZN ZN B1454 1555 1555 1.96 LINK OD1 ASP B 214 ZN ZN B1458 1555 1555 2.06 LINK OD2 ASP B 214 ZN ZN B1458 1555 1555 2.20 LINK OE1 GLU B 232 ZN ZN B1456 1555 1555 2.25 LINK O HOH B1120 ZN ZN B1452 1555 1555 2.50 CISPEP 1 GLN A 132 PRO A 133 0 -0.31 CISPEP 2 GLY A 316 PRO A 317 0 -2.73 CISPEP 3 GLN B 132 PRO B 133 0 -0.43 CISPEP 4 GLY B 316 PRO B 317 0 -3.07 CRYST1 82.190 36.620 104.940 90.00 113.49 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012167 0.000000 0.005288 0.00000 SCALE2 0.000000 0.027307 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010390 0.00000