data_1IHH # _entry.id 1IHH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IHH pdb_00001ihh 10.2210/pdb1ihh/pdb NDB DD0040 ? ? RCSB RCSB013271 ? ? WWPDB D_1000013271 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-10-26 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.value' 17 5 'Structure model' '_struct_conn.pdbx_dist_value' 18 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IHH _pdbx_database_status.recvd_initial_deposition_date 2001-04-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spingler, B.' 1 'Whittington, D.A.' 2 'Lippard, S.J.' 3 # _citation.id primary _citation.title '2.4 A crystal structure of an oxaliplatin 1,2-d(GpG) intrastrand cross-link in a DNA dodecamer duplex.' _citation.journal_abbrev Inorg.Chem. _citation.journal_volume 40 _citation.page_first 5596 _citation.page_last 5602 _citation.year 2001 _citation.journal_id_ASTM INOCAJ _citation.country US _citation.journal_id_ISSN 0020-1669 _citation.journal_id_CSD 0009 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11599959 _citation.pdbx_database_id_DOI 10.1021/ic010790t # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spingler, B.' 1 ? primary 'Whittington, D.A.' 2 ? primary 'Lippard, S.J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3'" 3565.316 1 ? ? ? ? 2 polymer syn "5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'" 3761.468 1 ? ? ? ? 3 non-polymer syn 'PLATINUM (II) ION' 195.078 1 ? ? ? ? 4 non-polymer syn 1R,2R-DIAMINOCYCLOHEXANE 114.189 1 ? ? ? ? 5 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ? 6 water nat water 18.015 12 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DT)(DC)(DC)' CCTCTGGTCTCC A ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DG)(DA)(DC)(DC)(DA)(DG)(DA)(DG)(DG)' GGAGACCAGAGG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PLATINUM (II) ION' PT 4 1R,2R-DIAMINOCYCLOHEXANE DNH 5 'BARIUM ION' BA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DT n 1 4 DC n 1 5 DT n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DC n 1 10 DT n 1 11 DC n 1 12 DC n 2 1 DG n 2 2 DG n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DC n 2 7 DC n 2 8 DA n 2 9 DG n 2 10 DA n 2 11 DG n 2 12 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DNH non-polymer . 1R,2R-DIAMINOCYCLOHEXANE ? 'C6 H14 N2' 114.189 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DG 6 6 6 DG +G A . n A 1 7 DG 7 7 7 DG +G A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DT 10 10 10 DT T A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DC 12 12 12 DC C A . n B 2 1 DG 1 1 1 DG G B . n B 2 2 DG 2 2 2 DG G B . n B 2 3 DA 3 3 3 DA A B . n B 2 4 DG 4 4 4 DG G B . n B 2 5 DA 5 5 5 DA A B . n B 2 6 DC 6 6 6 DC C B . n B 2 7 DC 7 7 7 DC C B . n B 2 8 DA 8 8 8 DA A B . n B 2 9 DG 9 9 9 DG G B . n B 2 10 DA 10 10 10 DA A B . n B 2 11 DG 11 11 11 DG G B . n B 2 12 DG 12 12 12 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PT 1 41 40 PT XXX A . D 4 DNH 1 40 40 DNH XXX A . E 5 BA 1 42 41 BA BA B . F 6 HOH 1 102 102 HOH HOH A . F 6 HOH 2 106 106 HOH HOH A . F 6 HOH 3 111 111 HOH HOH A . F 6 HOH 4 112 112 HOH HOH A . F 6 HOH 5 113 113 HOH HOH A . G 6 HOH 1 103 103 HOH HOH B . G 6 HOH 2 104 104 HOH HOH B . G 6 HOH 3 105 105 HOH HOH B . G 6 HOH 4 107 107 HOH HOH B . G 6 HOH 5 108 108 HOH HOH B . G 6 HOH 6 109 109 HOH HOH B . G 6 HOH 7 110 110 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 1IHH _cell.length_a 41.942 _cell.length_b 51.246 _cell.length_c 87.049 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IHH _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # _exptl.entry_id 1IHH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.82 _exptl_crystal.density_percent_sol 55 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'MPD, SODIUM CACODYLATE, SPERMINE*4HCl, BACL2, ETHYL ACETATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 'SODIUM CACODYLATE' ? ? ? 1 3 1 SPERMINE*4HCl ? ? ? 1 4 1 BaCl2 ? ? ? 1 5 1 'ETHYL ACETATE' ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 103 ? 1 2 173 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' MARRESEARCH 2000-02-27 ? 2 CCD CUSTOM-MADE 2000-02-10 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.970 1.0 2 1.0721 1.0 3 1.0724 1.0 4 1.0277 1.0 5 1.1206 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SSRL BEAMLINE BL9-1' SSRL BL9-1 0.970 0.970 2 SYNCHROTRON 'APS BEAMLINE 19-ID' APS 19-ID ? 1.0721,1.0724,1.0277,1.1206 # _reflns.entry_id 1IHH _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 4 _reflns.d_resolution_low 100 _reflns.d_resolution_high 2.4 _reflns.number_obs 6296 _reflns.number_all 61465 _reflns.percent_possible_obs 93.7 _reflns.pdbx_Rmerge_I_obs 0.0890000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.76 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.44 _reflns_shell.percent_possible_all 69.0 _reflns_shell.Rmerge_I_obs 0.3680000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1IHH _refine.ls_number_reflns_obs 4935 _refine.ls_number_reflns_all 6296 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 100 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 93.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2090000 _refine.ls_R_factor_R_free 0.2560000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 487 _refine.ls_number_parameters 2052 _refine.ls_number_restraints 2360 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 47.90 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1IHH _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen 0 _refine_analyze.occupancy_sum_non_hydrogen 508 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 508 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 100 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.021 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.106 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.001 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.006 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1IHH _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.2300000 _pdbx_refine.free_R_factor_no_cutoff 0.2870000 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 10.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 487 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.2090000 _pdbx_refine.free_R_factor_4sig_cutoff 0.2560000 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 10.0 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 631 _pdbx_refine.number_reflns_obs_4sig_cutoff 4935 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1IHH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1IHH _struct.title '2.4 ANGSTROM CRYSTAL STRUCTURE OF AN OXALIPLATIN 1,2-D(GPG) INTRASTRAND CROSS-LINK IN A DNA DODECAMER DUPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IHH _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, OXALIPLATIN, MODIFIED, DEOXYNUCLEIC ACID, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1IHH 1IHH ? ? ? 2 2 PDB 1IHH 1IHH ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IHH A 1 ? 12 ? 1IHH 1 ? 12 ? 1 12 2 2 1IHH B 1 ? 12 ? 1IHH 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 6 N7 ? ? ? 1_555 C PT . PT ? ? A DG 6 A PT 41 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc2 metalc ? ? A DG 6 O6 ? ? ? 1_555 C PT . PT ? ? A DG 6 A PT 41 1_555 ? ? ? ? ? ? ? 3.571 ? ? metalc3 metalc ? ? A DG 7 N7 ? ? ? 1_555 C PT . PT ? ? A DG 7 A PT 41 1_555 ? ? ? ? ? ? ? 1.945 ? ? metalc4 metalc ? ? A DG 7 O6 ? ? ? 1_555 C PT . PT ? ? A DG 7 A PT 41 1_555 ? ? ? ? ? ? ? 3.400 ? ? metalc5 metalc ? ? D DNH . N1 ? ? ? 1_555 C PT . PT ? ? A DNH 40 A PT 41 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc6 metalc ? ? D DNH . N2 ? ? ? 1_555 C PT . PT ? ? A DNH 40 A PT 41 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc7 metalc ? ? B DA 10 N7 ? ? ? 1_555 E BA . BA ? ? B DA 10 B BA 42 1_555 ? ? ? ? ? ? ? 3.111 ? ? metalc8 metalc ? ? B DG 11 O6 ? ? ? 1_555 E BA . BA ? ? B DG 11 B BA 42 1_555 ? ? ? ? ? ? ? 3.103 ? ? metalc9 metalc ? ? B DG 11 N7 ? ? ? 1_555 E BA . BA ? ? B DG 11 B BA 42 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc10 metalc ? ? E BA . BA ? ? ? 1_555 G HOH . O ? ? B BA 42 B HOH 107 1_555 ? ? ? ? ? ? ? 3.043 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 4 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 4 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 4 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 5 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 5 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 10 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 10 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 60.9 ? 2 N7 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N7 ? A DG 7 ? A DG 7 ? 1_555 98.4 ? 3 O6 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N7 ? A DG 7 ? A DG 7 ? 1_555 77.7 ? 4 N7 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 112.4 ? 5 O6 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 51.6 ? 6 N7 ? A DG 7 ? A DG 7 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 65.4 ? 7 N7 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH . ? A DNH 40 ? 1_555 155.0 ? 8 O6 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH . ? A DNH 40 ? 1_555 104.6 ? 9 N7 ? A DG 7 ? A DG 7 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH . ? A DNH 40 ? 1_555 97.8 ? 10 O6 ? A DG 7 ? A DG 7 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH . ? A DNH 40 ? 1_555 58.6 ? 11 N7 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH . ? A DNH 40 ? 1_555 79.6 ? 12 O6 ? A DG 6 ? A DG 6 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH . ? A DNH 40 ? 1_555 100.8 ? 13 N7 ? A DG 7 ? A DG 7 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH . ? A DNH 40 ? 1_555 177.9 ? 14 O6 ? A DG 7 ? A DG 7 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH . ? A DNH 40 ? 1_555 114.9 ? 15 N1 ? D DNH . ? A DNH 40 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH . ? A DNH 40 ? 1_555 84.0 ? 16 N7 ? B DA 10 ? B DA 10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 90.2 ? 17 N7 ? B DA 10 ? B DA 10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 N7 ? B DG 11 ? B DG 11 ? 1_555 69.3 ? 18 O6 ? B DG 11 ? B DG 11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 N7 ? B DG 11 ? B DG 11 ? 1_555 65.9 ? 19 N7 ? B DA 10 ? B DA 10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O ? G HOH . ? B HOH 107 ? 1_555 137.4 ? 20 O6 ? B DG 11 ? B DG 11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O ? G HOH . ? B HOH 107 ? 1_555 86.1 ? 21 N7 ? B DG 11 ? B DG 11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O ? G HOH . ? B HOH 107 ? 1_555 70.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PT 41 ? 3 'BINDING SITE FOR RESIDUE PT A 41' AC2 Software B BA 42 ? 3 'BINDING SITE FOR RESIDUE BA B 42' AC3 Software A DNH 40 ? 4 'BINDING SITE FOR RESIDUE DNH A 40' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DG A 6 ? DG A 6 . ? 1_555 ? 2 AC1 3 DG A 7 ? DG A 7 . ? 1_555 ? 3 AC1 3 DNH D . ? DNH A 40 . ? 1_555 ? 4 AC2 3 DA B 10 ? DA B 10 . ? 1_555 ? 5 AC2 3 DG B 11 ? DG B 11 . ? 1_555 ? 6 AC2 3 HOH G . ? HOH B 107 . ? 1_555 ? 7 AC3 4 DT A 5 ? DT A 5 . ? 1_555 ? 8 AC3 4 DG A 6 ? DG A 6 . ? 1_555 ? 9 AC3 4 DG A 7 ? DG A 7 . ? 1_555 ? 10 AC3 4 PT C . ? PT A 41 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.40 108.30 3.10 0.30 N 2 1 "C3'" B DG 2 ? ? "C2'" B DG 2 ? ? "C1'" B DG 2 ? ? 96.86 102.40 -5.54 0.80 N 3 1 "C3'" B DG 4 ? ? "C2'" B DG 4 ? ? "C1'" B DG 4 ? ? 97.52 102.40 -4.88 0.80 N 4 1 "O4'" B DG 4 ? ? "C1'" B DG 4 ? ? N9 B DG 4 ? ? 113.12 108.30 4.82 0.30 N 5 1 "O4'" B DA 8 ? ? "C4'" B DA 8 ? ? "C3'" B DA 8 ? ? 99.35 104.50 -5.15 0.40 N 6 1 "C5'" B DA 8 ? ? "C4'" B DA 8 ? ? "C3'" B DA 8 ? ? 123.51 115.70 7.81 1.20 N 7 1 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.83 108.30 2.53 0.30 N 8 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9 B DA 10 ? ? 103.46 108.00 -4.54 0.70 N 9 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 110.53 108.30 2.23 0.30 N # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'COVALENT PT-N BONDS' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BA BA BA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DNH C7 C N N 109 DNH C8 C N N 110 DNH C3 C N R 111 DNH C4 C N R 112 DNH C5 C N N 113 DNH C6 C N N 114 DNH N1 N N N 115 DNH N2 N N N 116 DNH H71 H N N 117 DNH H72 H N N 118 DNH H81 H N N 119 DNH H82 H N N 120 DNH H3 H N N 121 DNH H4 H N N 122 DNH H51 H N N 123 DNH H52 H N N 124 DNH H61 H N N 125 DNH H62 H N N 126 DNH H11 H N N 127 DNH H12 H N N 128 DNH H21 H N N 129 DNH H22 H N N 130 DT OP3 O N N 131 DT P P N N 132 DT OP1 O N N 133 DT OP2 O N N 134 DT "O5'" O N N 135 DT "C5'" C N N 136 DT "C4'" C N R 137 DT "O4'" O N N 138 DT "C3'" C N S 139 DT "O3'" O N N 140 DT "C2'" C N N 141 DT "C1'" C N R 142 DT N1 N N N 143 DT C2 C N N 144 DT O2 O N N 145 DT N3 N N N 146 DT C4 C N N 147 DT O4 O N N 148 DT C5 C N N 149 DT C7 C N N 150 DT C6 C N N 151 DT HOP3 H N N 152 DT HOP2 H N N 153 DT "H5'" H N N 154 DT "H5''" H N N 155 DT "H4'" H N N 156 DT "H3'" H N N 157 DT "HO3'" H N N 158 DT "H2'" H N N 159 DT "H2''" H N N 160 DT "H1'" H N N 161 DT H3 H N N 162 DT H71 H N N 163 DT H72 H N N 164 DT H73 H N N 165 DT H6 H N N 166 HOH O O N N 167 HOH H1 H N N 168 HOH H2 H N N 169 PT PT PT N N 170 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DNH C7 C8 sing N N 113 DNH C7 C5 sing N N 114 DNH C7 H71 sing N N 115 DNH C7 H72 sing N N 116 DNH C8 C6 sing N N 117 DNH C8 H81 sing N N 118 DNH C8 H82 sing N N 119 DNH C3 C4 sing N N 120 DNH C3 C5 sing N N 121 DNH C3 N1 sing N N 122 DNH C3 H3 sing N N 123 DNH C4 C6 sing N N 124 DNH C4 N2 sing N N 125 DNH C4 H4 sing N N 126 DNH C5 H51 sing N N 127 DNH C5 H52 sing N N 128 DNH C6 H61 sing N N 129 DNH C6 H62 sing N N 130 DNH N1 H11 sing N N 131 DNH N1 H12 sing N N 132 DNH N2 H21 sing N N 133 DNH N2 H22 sing N N 134 DT OP3 P sing N N 135 DT OP3 HOP3 sing N N 136 DT P OP1 doub N N 137 DT P OP2 sing N N 138 DT P "O5'" sing N N 139 DT OP2 HOP2 sing N N 140 DT "O5'" "C5'" sing N N 141 DT "C5'" "C4'" sing N N 142 DT "C5'" "H5'" sing N N 143 DT "C5'" "H5''" sing N N 144 DT "C4'" "O4'" sing N N 145 DT "C4'" "C3'" sing N N 146 DT "C4'" "H4'" sing N N 147 DT "O4'" "C1'" sing N N 148 DT "C3'" "O3'" sing N N 149 DT "C3'" "C2'" sing N N 150 DT "C3'" "H3'" sing N N 151 DT "O3'" "HO3'" sing N N 152 DT "C2'" "C1'" sing N N 153 DT "C2'" "H2'" sing N N 154 DT "C2'" "H2''" sing N N 155 DT "C1'" N1 sing N N 156 DT "C1'" "H1'" sing N N 157 DT N1 C2 sing N N 158 DT N1 C6 sing N N 159 DT C2 O2 doub N N 160 DT C2 N3 sing N N 161 DT N3 C4 sing N N 162 DT N3 H3 sing N N 163 DT C4 O4 doub N N 164 DT C4 C5 sing N N 165 DT C5 C7 sing N N 166 DT C5 C6 doub N N 167 DT C7 H71 sing N N 168 DT C7 H72 sing N N 169 DT C7 H73 sing N N 170 DT C6 H6 sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1IHH 'double helix' 1IHH 'a-form double helix' 1IHH 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.199 -0.281 -0.573 8.211 -0.914 0.048 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1 1 A DC 2 1_555 B DG 11 1_555 0.035 -0.297 0.081 -1.329 -11.546 -5.580 2 A_DC2:DG11_B A 2 ? B 11 ? 19 1 1 A DT 3 1_555 B DA 10 1_555 0.001 -0.259 0.347 -10.893 -12.256 -2.040 3 A_DT3:DA10_B A 3 ? B 10 ? 20 1 1 A DC 4 1_555 B DG 9 1_555 -0.167 -0.322 0.568 -8.942 -5.182 -3.996 4 A_DC4:DG9_B A 4 ? B 9 ? 19 1 1 A DT 5 1_555 B DA 8 1_555 0.115 -0.276 0.082 5.335 -2.918 2.182 5 A_DT5:DA8_B A 5 ? B 8 ? 20 1 1 A DG 6 1_555 B DC 7 1_555 -0.100 -0.342 0.291 19.330 -17.841 -3.289 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1 1 A DG 7 1_555 B DC 6 1_555 0.260 -0.324 0.285 2.747 -17.927 1.110 7 A_DG7:DC6_B A 7 ? B 6 ? 19 1 1 A DT 8 1_555 B DA 5 1_555 0.050 -0.210 0.167 -9.682 -13.668 2.614 8 A_DT8:DA5_B A 8 ? B 5 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 0.319 -0.249 0.290 -23.546 -2.091 -1.633 9 A_DC9:DG4_B A 9 ? B 4 ? 19 1 1 A DT 10 1_555 B DA 3 1_555 0.077 -0.133 0.164 -9.328 -3.804 -7.841 10 A_DT10:DA3_B A 10 ? B 3 ? 20 1 1 A DC 11 1_555 B DG 2 1_555 -0.671 -0.356 -0.207 -1.891 -7.228 -6.778 11 A_DC11:DG2_B A 11 ? B 2 ? 19 1 1 A DC 12 1_555 B DG 1 1_555 -0.139 -0.298 0.207 -2.480 -2.913 1.343 12 A_DC12:DG1_B A 12 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DC 2 1_555 B DG 11 1_555 -0.789 -2.421 3.580 -5.463 6.475 31.595 -5.471 0.415 3.125 11.632 9.815 32.683 1 AA_DC1DC2:DG11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DC 2 1_555 B DG 11 1_555 A DT 3 1_555 B DA 10 1_555 -0.552 -1.110 3.442 -1.214 7.854 31.067 -3.448 0.778 3.095 14.370 2.221 32.043 2 AA_DC2DT3:DA10DG11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DT 3 1_555 B DA 10 1_555 A DC 4 1_555 B DG 9 1_555 0.498 -1.671 3.123 -0.887 4.337 32.474 -3.650 -1.023 2.868 7.710 1.577 32.766 3 AA_DT3DC4:DG9DA10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DC 4 1_555 B DG 9 1_555 A DT 5 1_555 B DA 8 1_555 -0.058 -1.487 2.777 3.034 1.782 34.852 -2.695 0.478 2.685 2.965 -5.050 35.024 4 AA_DC4DT5:DA8DG9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DT 5 1_555 B DA 8 1_555 A DG 6 1_555 B DC 7 1_555 -0.714 -1.644 3.138 -1.221 8.067 21.212 -6.724 1.428 2.394 20.942 3.169 22.710 5 AA_DT5DG6:DC7DA8_BB A 5 ? B 8 ? A 6 ? B 7 ? 1 A DG 6 1_555 B DC 7 1_555 A DG 7 1_555 B DC 6 1_555 1.054 -1.734 3.441 1.434 21.844 34.573 -4.711 -1.368 2.072 32.986 -2.165 40.741 6 AA_DG6DG7:DC6DC7_BB A 6 ? B 7 ? A 7 ? B 6 ? 1 A DG 7 1_555 B DC 6 1_555 A DT 8 1_555 B DA 5 1_555 -0.193 -1.385 3.648 3.355 1.124 33.319 -2.608 0.946 3.565 1.953 -5.830 33.501 7 AA_DG7DT8:DA5DC6_BB A 7 ? B 6 ? A 8 ? B 5 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 0.277 -0.628 3.488 2.840 3.151 41.919 -1.219 -0.075 3.445 4.390 -3.957 42.124 8 AA_DT8DC9:DG4DA5_BB A 8 ? B 5 ? A 9 ? B 4 ? 1 A DC 9 1_555 B DG 4 1_555 A DT 10 1_555 B DA 3 1_555 -1.030 -0.556 3.076 2.570 3.074 25.923 -1.985 2.904 2.878 6.799 -5.685 26.226 9 AA_DC9DT10:DA3DG4_BB A 9 ? B 4 ? A 10 ? B 3 ? 1 A DT 10 1_555 B DA 3 1_555 A DC 11 1_555 B DG 2 1_555 0.495 -0.235 3.057 6.463 -3.071 33.592 0.060 0.126 3.105 -5.240 -11.027 34.324 10 AA_DT10DC11:DG2DA3_BB A 10 ? B 3 ? A 11 ? B 2 ? 1 A DC 11 1_555 B DG 2 1_555 A DC 12 1_555 B DG 1 1_555 0.478 -0.171 3.458 -1.990 3.840 31.900 -1.029 -1.235 3.380 6.947 3.601 32.185 11 AA_DC11DC12:DG1DG2_BB A 11 ? B 2 ? A 12 ? B 1 ? # _atom_sites.entry_id 1IHH _atom_sites.fract_transf_matrix[1][1] 0.023842 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019514 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011488 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BA C N O P PT # loop_